>E41L1_MOUSE (Q9Z2H5) Band 4.1-like protein 1 (Neuronal protein 4.1) (4.1N)|
          Length = 879

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = -3

Query: 347 KTHMTVVPPITTAVVFLSFHNS------TSAVLPPPSTLCTEVSSPSSLNPRDL 204
           K  MT  P ITT  +  +  NS       +A++P P T+ TE+ S S +  +D+
Sbjct: 736 KDFMTTPPCITTETISTTMENSLKSGKGAAAMIPGPQTVATEIRSLSPIIGKDV 789

>VP75_SHV21 (P11282) Probable membrane antigen 75 (Tegument protein)|
          Length = 1299

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 367  GNQALQIKPI*QLCHRSPQQLFSCPS 290
            GN A+ +K +  LC   P QL++CPS
Sbjct: 1002 GNNAMDLKHLEDLCTHKPLQLYTCPS 1027

>MURD_SALCH (Q57TD2) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 438

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 215 GSGCSARTPPCTRCLVAVRLLMYCYGRTRKQL 310
           G G SA   P TR L   R+ +YC+GR   QL
Sbjct: 346 GDGKSADFSPLTRYLTGDRIRLYCFGRDGAQL 377

>MURD_SALTY (Q8ZRU4) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 437

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 215 GSGCSARTPPCTRCLVAVRLLMYCYGRTRKQL 310
           G G SA   P TR L   R+ +YC+GR   QL
Sbjct: 345 GDGKSADFSPLTRYLTGDRIRLYCFGRDGAQL 376

>E41L1_HUMAN (Q9H4G0) Band 4.1-like protein 1 (Neuronal protein 4.1) (4.1N)|
          Length = 881

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
 Frame = -3

Query: 407 RTPIITWDNRVKRW*SSTSNKTHMTVVPPITTAVVFLSFHNS------TSAVLPPPSTLC 246
           +T +   DN  +   S++  +  +   P ITT  +  +  NS       +A++P P T+ 
Sbjct: 718 QTRVSAMDNTQQVDGSASVGREFIATTPSITTETISTTMENSLKSGKGAAAMIPGPQTVA 777

Query: 245 TEVSSPSSLNPRDL 204
           TE+ S S +  +D+
Sbjct: 778 TEIRSLSPIIGKDV 791

>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)|
          Length = 428

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -3

Query: 329 VPPITTAVVFLSFHNSTSAVLPPPSTLCTEVSSPSS 222
           +PP+TT    LS   + S  LP PST+C   +SP++
Sbjct: 369 LPPVTTLPPALSVPTA-SQQLPAPSTVCAAAASPTA 403

>MURD_SALPA (Q5PDC2) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 438

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 215 GSGCSARTPPCTRCLVAVRLLMYCYGRTRKQL 310
           G G SA   P  R L   R+ +YC+GR   QL
Sbjct: 346 GDGKSADFSPLARYLTGDRIRLYCFGRDGAQL 377

>MURD_SALTI (Q8Z9H0) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 437

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 215 GSGCSARTPPCTRCLVAVRLLMYCYGRTRKQL 310
           G G SA   P  R L   R+ +YC+GR   QL
Sbjct: 345 GDGKSADFSPLARYLTGDRIRLYCFGRDGAQL 376

>MYO1_SCHPO (Q9Y7Z8) Myosin-1|
          Length = 1217

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 323  PITTAVVFLSFHNSTSAVLPPPSTLCTEVSSPSSLN 216
            P+T+    +    + SA  P PST+ +  SSPS+++
Sbjct: 1043 PVTSTTTTIKQATTVSASKPAPSTVTSAASSPSNIS 1078

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
 Frame = -3

Query: 425  HTNKMARTPIITWDNRVKRW*SSTSNKTHMTVVPPITTAVVFLSFHNSTSAVLPPP---S 255
            HT+ +  T   T         SST    H T VP  TT     +  +S    L PP   S
Sbjct: 3246 HTSTVLTTTATTTRTGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWIS 3305

Query: 254  TLCTEVSSPSSLNPRDL 204
            T  T  +  S++ P  +
Sbjct: 3306 TTTTPTTRGSTVTPSSI 3322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,067,232
Number of Sequences: 219361
Number of extensions: 745917
Number of successful extensions: 1989
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)