ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart50h10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55685.1|BLYLDHA13 Hordeum vulgare L-lactate dehydrogenase mRNA, complete cds Length = 1298 Score = 706 bits (356), Expect = 0.0 Identities = 380/386 (98%), Gaps = 4/386 (1%) Strand = Plus / Plus Query: 48 ccgcatttgatcggaccagcgtcccattccacccccttcccaccctgtcgaggatgcaca 107 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1 ccgcatttgatcggaccagcgtcccattccacccccttcccaccccgtcgaggatgcaca 60 Query: 108 aggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttcc 167 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcgtcgtcgctgtcggagctcggcttcgacgccgggggcgcctcgtcgggcttcttcc 120 Query: 168 ggccggtggccgacggctgcccggccaccccgacctcctccgccgtcccgcaccgccgcc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggccggtggccgacggctgcccggccaccccgacctcctccgccgtcccgcaccgccgcc 180 Query: 228 tcaccaagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tcaccaagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcc 240 Query: 288 tcacccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tcacccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcg 300 Query: 348 gcgaggcgctcgacctgcagcacgccgccgccttccctcccgcgcgtccgcatcgcctcc 407 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 301 gcgaggcgctcgacctgcagcacgccgccgcctt-cctcccgcgcgtccgcat---ctcc 356 Query: 408 ggcaccgacgccgccgtcaccaagaa 433 |||||||||||||||||||||||||| Sbjct: 357 ggcaccgacgccgccgtcaccaagaa 382
>gb|M55684.1|BLYLDHB12 Hordeum vulgare L-lactate dehydrogenase mRNA, complete cds Length = 1166 Score = 387 bits (195), Expect = e-104 Identities = 271/295 (91%), Gaps = 1/295 (0%) Strand = Plus / Plus Query: 139 cgccgggggcgcctcgtcgggcttcttccggccggtggccgacggctgcccggccacccc 198 |||||||| ||||||||||||||||||||| ||||||| |||||||||||| ||| | Sbjct: 1 cgccggggacgcctcgtcgggcttcttccgcgcggtggcggacggctgcccgatcacgca 60 Query: 199 gacctcctccgccgtcccgcaccgccgcctcaccaagatctccgtcatcggggccggcaa 258 ||||||| | ||| |||||||||||||||||||||| | ||||||||||| |||||||| Sbjct: 61 cacctcctgctccgccccgcaccgccgcctcaccaaggtgtccgtcatcggcgccggcaa 120 Query: 259 cgtgggcatggccatcgcgcagaccatcctcacccagaacctggccgacgagatcgcgct 318 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 121 cgtgggcatggccatcgcgcagaccatcctcacgcagaacctggcggacgagatcgcgct 180 Query: 319 cgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctgcagcacgccgccgc 378 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggtggacgccctccccgacaagctccgcggcgaggcgctcgacctgcagcacgccgccgc 240 Query: 379 cttccctcccgcgcgtccgcatcgcctccggcaccgacgccgccgtcaccaagaa 433 || |||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 241 gtt-cctcccgcgcgtccgcatcgtctccggcacggacgccgccgtcaccaagaa 294
>emb|Z11754.1|ZMLACDEHG Z.mays gene for lactate dehydrogenase Length = 2999 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 242 gtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctg 301 |||||||| || ||||||||||| |||||||||||||||||||||||||| | ||||| Sbjct: 1301 gtcatcggcgcgggcaacgtggggatggccatcgcgcagaccatcctcacgcgcgacctg 1360 Query: 302 gccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgac 361 ||||||||||||||||| || |||||| |||| |||||||||||||| ||| ||| ||| Sbjct: 1361 gccgacgagatcgcgctggtggacgcggtcccggacaagctccgcggggagatgctggac 1420 Query: 362 ctgcagcacgc 372 ||||||||||| Sbjct: 1421 ctgcagcacgc 1431 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 116 tcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttccg 168 ||||| || |||||||||||||||||||| | ||| ||||||||||||||||| Sbjct: 1181 tcgctctccgagctgggcttcgacgccggcgacgcgtcgtcgggcttcttccg 1233
>gb|AY109690.1| Zea mays CL2158_1 mRNA sequence Length = 1496 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 242 gtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctg 301 |||||||| || ||||||||||| |||||||||||||||||||||||||| | ||||| Sbjct: 204 gtcatcggcgcgggcaacgtggggatggccatcgcgcagaccatcctcacgcgcgacctg 263 Query: 302 gccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgac 361 ||||||||||||||||| || |||||| |||| |||||||||||||| ||| ||| ||| Sbjct: 264 gccgacgagatcgcgctggtggacgcggtcccggacaagctccgcggggagatgctggac 323 Query: 362 ctgcagcacgc 372 ||||||||||| Sbjct: 324 ctgcagcacgc 334 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 116 tcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttccg 168 ||||| || |||||||||||||||||||| | ||| ||||||||||||||||| Sbjct: 84 tcgctctccgagctgggcttcgacgccggcgacgcgtcgtcgggcttcttccg 136
>ref|XM_463814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1602 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Minus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 1165 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 1106 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 1105 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 1046 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 1045 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 995 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 1291 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 1232 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 1231 cgtccggtggcggacggc 1214
>ref|XM_463815.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1414 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 243 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 302 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 303 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 362 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 363 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 413 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 117 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 176 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 177 cgtccggtggcggacggc 194
>ref|XM_506679.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1212_C06.24 mRNA Length = 1509 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 418 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 477 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 478 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 537 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 538 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 588 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 292 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 351 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 352 cgtccggtggcggacggc 369
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 295740 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 295799 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 295800 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 295859 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 295860 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 295910 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 295614 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 295673 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 295674 cgtccggtggcggacggc 295691 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ccgccgccttccctcccgcg 391 |||||||||||||||||||| Sbjct: 7314645 ccgccgccttccctcccgcg 7314626
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 24524 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 24583 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 24584 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 24643 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 24644 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 24694 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 24398 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 24457 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 24458 cgtccggtggcggacggc 24475
>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C06 Length = 110989 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 105715 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 105774 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 105775 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 105834 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 105835 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 105885 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 105589 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 105648 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 105649 cgtccggtggcggacggc 105666
>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, clone:OJA1212_C06 Length = 113554 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 108280 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 108339 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 108340 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 108399 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 108400 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 108450 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 108154 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 108213 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 108214 cgtccggtggcggacggc 108231
>dbj|AK106891.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-G06, full insert sequence Length = 1601 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Minus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 1164 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 1105 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 1104 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 1045 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 1044 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 994 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 1290 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 1231 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 1230 cgtccggtggcggacggc 1213
>dbj|AK105416.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A01, full insert sequence Length = 1414 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 243 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 302 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 303 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 362 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 363 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 413 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 117 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 176 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 177 cgtccggtggcggacggc 194
>dbj|AK103257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124A12, full insert sequence Length = 1510 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 418 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 477 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 478 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 537 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 538 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 588 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 292 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 351 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 352 cgtccggtggcggacggc 369
>dbj|D13817.1|RICLDH Oryza sativa (japonica cultivar-group) mRNA for lactate dehydrogenase, complete cds Length = 1412 Score = 119 bits (60), Expect = 8e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 304 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 243 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 302 Query: 305 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 364 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 303 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 362 Query: 365 cagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 |||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 363 cagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 413 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 117 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 176 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 177 cgtccggtggcggacggc 194
>ref|NM_185321.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1508 Score = 105 bits (53), Expect = 1e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 232 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcac 291 ||||||||| || ||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 278 caagatctcggtgatcggcgcgggcaacgtgggcatggccatcgcgcagacgatcctgac 337 Query: 292 ccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcga 351 ||| |||| ||||||||||||| ||| |||||||| | | |||||| | || ||||| Sbjct: 338 gcaggacctcgccgacgagatcgtgctgatcgacgcggtggcggacaaggtgcggggcga 397 Query: 352 ggcgctcgacctgcagcacgc 372 | ||| |||||||||||||| Sbjct: 398 gatgctggacctgcagcacgc 418 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccg 143 ||||||||||||||||| |||||||| |||||||||| Sbjct: 168 aaggcgtcgtcgctgtctgagctggggttcgacgccg 204
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 105 bits (53), Expect = 1e-19 Identities = 119/141 (84%) Strand = Plus / Minus Query: 232 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcac 291 ||||||||| || ||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 347239 caagatctcggtgatcggcgcgggcaacgtgggcatggccatcgcgcagacgatcctgac 347180 Query: 292 ccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcga 351 ||| |||| ||||||||||||| ||| |||||||| | | |||||| | || ||||| Sbjct: 347179 gcaggacctcgccgacgagatcgtgctgatcgacgcggtggcggacaaggtgcggggcga 347120 Query: 352 ggcgctcgacctgcagcacgc 372 | ||| |||||||||||||| Sbjct: 347119 gatgctggacctgcagcacgc 347099 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccg 143 ||||||||||||||||| |||||||| |||||||||| Sbjct: 347349 aaggcgtcgtcgctgtctgagctggggttcgacgccg 347313 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 tcccattccacccccttccc 88 |||||||||||||||||||| Sbjct: 28882402 tcccattccacccccttccc 28882421
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 105 bits (53), Expect = 1e-19 Identities = 119/141 (84%) Strand = Plus / Minus Query: 232 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcac 291 ||||||||| || ||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 57192 caagatctcggtgatcggcgcgggcaacgtgggcatggccatcgcgcagacgatcctgac 57133 Query: 292 ccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcga 351 ||| |||| ||||||||||||| ||| |||||||| | | |||||| | || ||||| Sbjct: 57132 gcaggacctcgccgacgagatcgtgctgatcgacgcggtggcggacaaggtgcggggcga 57073 Query: 352 ggcgctcgacctgcagcacgc 372 | ||| |||||||||||||| Sbjct: 57072 gatgctggacctgcagcacgc 57052 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccg 143 ||||||||||||||||| |||||||| |||||||||| Sbjct: 57302 aaggcgtcgtcgctgtctgagctggggttcgacgccg 57266
>dbj|AK106504.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-F11, full insert sequence Length = 1508 Score = 105 bits (53), Expect = 1e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 232 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcac 291 ||||||||| || ||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 278 caagatctcggtgatcggcgcgggcaacgtgggcatggccatcgcgcagacgatcctgac 337 Query: 292 ccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcga 351 ||| |||| ||||||||||||| ||| |||||||| | | |||||| | || ||||| Sbjct: 338 gcaggacctcgccgacgagatcgtgctgatcgacgcggtggcggacaaggtgcggggcga 397 Query: 352 ggcgctcgacctgcagcacgc 372 | ||| |||||||||||||| Sbjct: 398 gatgctggacctgcagcacgc 418 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccg 143 ||||||||||||||||| |||||||| |||||||||| Sbjct: 168 aaggcgtcgtcgctgtctgagctggggttcgacgccg 204
>dbj|D16685.1|RICLT36RGL Oryza sativa (japonica cultivar-group) gene for lactate dehydrogenase, complete cds Length = 5857 Score = 105 bits (53), Expect = 1e-19 Identities = 145/173 (83%), Gaps = 2/173 (1%) Strand = Plus / Plus Query: 245 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacc-tggc 303 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | | | |||| Sbjct: 2634 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggagcatggc 2693 Query: 304 cgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacct 363 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| ||||| Sbjct: 2694 ggacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacct 2753 Query: 364 gcagcacgccgccgccttccctcccgcgcgtccgcatcgcctccggcaccgac 416 ||||||||| || || || |||||| ||||||||| ||| ||||| ||||||| Sbjct: 2754 gcagcacgcggcggcgtt-cctcccccgcgtccgcctcgtctccgacaccgac 2805 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 107 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 166 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 2508 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 2567 Query: 167 cggccggtggccgacggc 184 || |||||||| |||||| Sbjct: 2568 cgtccggtggcggacggc 2585
>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence Length = 130194 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 232 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcct 288 |||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||| Sbjct: 127825 caagatctccgtcatcggcgccggcaacgtcggcatggccattgctcagaccatcct 127881
>emb|Y10603.1|LELDH2GN Lycopersicon esculentum ldh2 gene Length = 3608 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 233 aagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacc 292 ||||||||||||||||| | ||||||||| || ||||||||||| || || ||||| || Sbjct: 978 aagatctccgtcatcggcgtcggcaacgtcggaatggccatcgctcaaacaatccttact 1037 Query: 293 cagaacctggccgacgagatcgcgctcgtcgacgc 327 ||| | || | ||||||| | || ||||||||||| Sbjct: 1038 caggatctcgtcgacgagctagcactcgtcgacgc 1072
>emb|Y08888.1|LELDH2 Lycopersicon esculentum mRNA for L-lactate dehydrogenase, clone LDH2 Length = 1449 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 233 aagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacc 292 ||||||||||||||||| | ||||||||| || ||||||||||| || || ||||| || Sbjct: 151 aagatctccgtcatcggcgtcggcaacgtcggaatggccatcgctcaaacaatccttact 210 Query: 293 cagaacctggccgacgagatcgcgctcgtcgacgc 327 ||| | || | ||||||| | || ||||||||||| Sbjct: 211 caggatctcgtcgacgagctagcactcgtcgacgc 245
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 326 gcgctccccgacaagctccgcggcgagg 353 |||||| ||||||||||||||||||||| Sbjct: 29779 gcgctcgccgacaagctccgcggcgagg 29806
>ref|NM_117832.2| Arabidopsis thaliana L-lactate dehydrogenase/ lactate dehydrogenase/ oxidoreductase AT4G17260 mRNA, complete cds Length = 1261 Score = 46.1 bits (23), Expect = 0.094 Identities = 74/91 (81%) Strand = Plus / Plus Query: 237 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 296 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 193 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 252 Query: 297 acctggccgacgagatcgcgctcgtcgacgc 327 | || || ||||||||||| ||||| ||||| Sbjct: 253 atctcgcagacgagatcgctctcgttgacgc 283
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 304 cgacgagatcgcgctcgtcgacgcgct 330 |||| |||||||||||||||||||||| Sbjct: 1871261 cgacaagatcgcgctcgtcgacgcgct 1871287 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cctggccgacgagatcgcgc 317 |||||||||||||||||||| Sbjct: 3612152 cctggccgacgagatcgcgc 3612133
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 46.1 bits (23), Expect = 0.094 Identities = 74/91 (81%) Strand = Plus / Plus Query: 237 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 296 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 38956 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 39015 Query: 297 acctggccgacgagatcgcgctcgtcgacgc 327 | || || ||||||||||| ||||| ||||| Sbjct: 39016 atctcgcagacgagatcgctctcgttgacgc 39046
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 46.1 bits (23), Expect = 0.094 Identities = 74/91 (81%) Strand = Plus / Plus Query: 237 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 296 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 28321 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 28380 Query: 297 acctggccgacgagatcgcgctcgtcgacgc 327 | || || ||||||||||| ||||| ||||| Sbjct: 28381 atctcgcagacgagatcgctctcgttgacgc 28411
>emb|BX826983.1|CNS0A35J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB83ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1207 Score = 46.1 bits (23), Expect = 0.094 Identities = 74/91 (81%) Strand = Plus / Plus Query: 237 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 296 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 181 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 240 Query: 297 acctggccgacgagatcgcgctcgtcgacgc 327 | || || ||||||||||| ||||| ||||| Sbjct: 241 atctcgcagacgagatcgctctcgttgacgc 271
>gb|AY087276.1| Arabidopsis thaliana clone 33509 mRNA, complete sequence Length = 1261 Score = 46.1 bits (23), Expect = 0.094 Identities = 74/91 (81%) Strand = Plus / Plus Query: 237 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 296 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 193 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 252 Query: 297 acctggccgacgagatcgcgctcgtcgacgc 327 | || || ||||||||||| ||||| ||||| Sbjct: 253 atctcgcagacgagatcgctctcgttgacgc 283
>gb|AF043130.1|AF043130 Arabidopsis thaliana lactate dehydrogenase (LDH1) gene, complete cds Length = 2343 Score = 46.1 bits (23), Expect = 0.094 Identities = 74/91 (81%) Strand = Plus / Plus Query: 237 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 296 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 692 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 751 Query: 297 acctggccgacgagatcgcgctcgtcgacgc 327 | || || ||||||||||| ||||| ||||| Sbjct: 752 atctcgcagacgagatcgctctcgttgacgc 782
>gb|AY658893.1| Synthetic construct Peudomonas aeruginosa clone FLH047616.01F PA2017 gene, partial cds Length = 930 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 ccgcggcgaggcgctcgacctg 364 |||||||||||||||||||||| Sbjct: 609 ccgcggcgaggcgctcgacctg 630
>gb|AF067859.1| Solanum tuberosum lactate dehydrogenase-2 (LDH-2) mRNA, complete cds Length = 1462 Score = 44.1 bits (22), Expect = 0.37 Identities = 76/94 (80%) Strand = Plus / Plus Query: 233 aagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacc 292 ||||||||||| ||||| | |||||| || || ||||||||||| || || ||||| || Sbjct: 131 aagatctccgtgatcggcgtcggcaatgtcgggatggccatcgcccaaacaatccttact 190 Query: 293 cagaacctggccgacgagatcgcgctcgtcgacg 326 ||| | || | ||||||| | || |||||||||| Sbjct: 191 caggatcttgtcgacgagctagcactcgtcgacg 224
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 351 aggcgctcgacctgcagcacgc 372 |||||||||||||||||||||| Sbjct: 4649423 aggcgctcgacctgcagcacgc 4649444
>emb|AL357793.6| Human DNA sequence from clone RP11-98G13 on chromosome 1 Contains a novel gene and part of a novel gene, complete sequence Length = 145630 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 75 tccacccccttcccaccctgtc 96 |||||||||||||||||||||| Sbjct: 119524 tccacccccttcccaccctgtc 119503
>gb|AE004628.1| Pseudomonas aeruginosa PAO1, section 189 of 529 of the complete genome Length = 10962 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 ccgcggcgaggcgctcgacctg 364 |||||||||||||||||||||| Sbjct: 2509 ccgcggcgaggcgctcgacctg 2530
>gb|AF147719.1|AF147719 Pseudomonas aeruginosa transcriptional regulator (amrR), putative membrane fusion protein (amrA), and putative RND transporter (amrB) genes, complete cds Length = 6000 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 ccgcggcgaggcgctcgacctg 364 |||||||||||||||||||||| Sbjct: 5925 ccgcggcgaggcgctcgacctg 5904
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gccggtggccgacggctgcccggcca 194 |||||||||||||||| ||||||||| Sbjct: 3307649 gccggtggccgacggcagcccggcca 3307674
>dbj|AB015853.1| Pseudomonas aeruginosa gene for MexX and MexY, complete cds Length = 5461 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 ccgcggcgaggcgctcgacctg 364 |||||||||||||||||||||| Sbjct: 5032 ccgcggcgaggcgctcgacctg 5011
>ref|XM_475105.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 297 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 cgccgccgccttccctcccgc 390 ||||||||||||||||||||| Sbjct: 196 cgccgccgccttccctcccgc 176
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 cgccgccgccttccctcccgc 390 ||||||||||||||||||||| Sbjct: 170064 cgccgccgccttccctcccgc 170084
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 cgcatcgcctccggcaccgac 416 ||||||||||||||||||||| Sbjct: 3224379 cgcatcgcctccggcaccgac 3224359 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 gatcgcgctcgtcgacgcgct 330 ||||||||||||||||||||| Sbjct: 2359184 gatcgcgctcgtcgacgcgct 2359204 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 agatcgcgctcgtcgacgcg 328 |||||||||||||||||||| Sbjct: 912475 agatcgcgctcgtcgacgcg 912494
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 gatcgcgctcgtcgacgcgct 330 ||||||||||||||||||||| Sbjct: 1137266 gatcgcgctcgtcgacgcgct 1137246 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 cgcatcgcctccggcaccgac 416 ||||||||||||||||||||| Sbjct: 756777 cgcatcgcctccggcaccgac 756797 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 agatcgcgctcgtcgacgcg 328 |||||||||||||||||||| Sbjct: 1955074 agatcgcgctcgtcgacgcg 1955093
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 cgccgccgccttccctcccgc 390 ||||||||||||||||||||| Sbjct: 631 cgccgccgccttccctcccgc 651
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 tcgcctccggcaccgacgccg 420 ||||||||||||||||||||| Sbjct: 107307 tcgcctccggcaccgacgccg 107287
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 gaacctggccgacgagatcgc 315 ||||||||||||||||||||| Sbjct: 2632750 gaacctggccgacgagatcgc 2632730
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 gatcgcgctcgtcgacgcgct 330 ||||||||||||||||||||| Sbjct: 1018226 gatcgcgctcgtcgacgcgct 1018206 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 cgcatcgcctccggcaccgac 416 ||||||||||||||||||||| Sbjct: 565432 cgcatcgcctccggcaccgac 565452 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 agatcgcgctcgtcgacgcg 328 |||||||||||||||||||| Sbjct: 2421762 agatcgcgctcgtcgacgcg 2421743
>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE Length = 153273 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 232 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcct 288 ||||||||| || ||||| || ||||||||||| ||||| || || || |||||||| Sbjct: 25411 caagatctcagttatcggcgcaggcaacgtgggaatggctatagctcaaaccatcct 25355
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ctgtcggagctgggcttcgacgccg 143 ||||||| ||||||||||||||||| Sbjct: 3914156 ctgtcggggctgggcttcgacgccg 3914132
>gb|AF005404.2|AF005404 Pseudomonas aeruginosa pyocyanine biosynthesis operon, complete sequence Length = 6720 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 tccgcggcgaggcgctcgacctgca 366 ||||||||||||||||||| ||||| Sbjct: 3400 tccgcggcgaggcgctcgaactgca 3424
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ccaccccgacctcctccgccg 212 ||||||||||||||||||||| Sbjct: 17618608 ccaccccgacctcctccgccg 17618588
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 cgccgccgccttccctcccgc 390 ||||||||||||||||||||| Sbjct: 8089445 cgccgccgccttccctcccgc 8089465
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 cgccgccgccttccctcccgc 390 ||||||||||||||||||||| Sbjct: 17007264 cgccgccgccttccctcccgc 17007284 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 398 catcgcctccggcaccgacgccgccgtcacca 429 ||||||| ||| ||||| |||||||||||||| Sbjct: 12073383 catcgccgccgccaccgccgccgccgtcacca 12073352
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 cttcttccggccggtggccgacggc 184 |||||||||||||| |||||||||| Sbjct: 5505402 cttcttccggccggaggccgacggc 5505426 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 114 cgtcgctgtcggagctgggcttcgacgc 141 |||||||||||| ||| ||||||||||| Sbjct: 7748789 cgtcgctgtcggtgctcggcttcgacgc 7748762 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 ctggccgacgagatcgcgctcgtc 322 ||||||||||||||||||| |||| Sbjct: 1295280 ctggccgacgagatcgcgcacgtc 1295303
>gb|AE004838.1| Pseudomonas aeruginosa PAO1, section 399 of 529 of the complete genome Length = 10809 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 tccgcggcgaggcgctcgacctgca 366 ||||||||||||||||||| ||||| Sbjct: 3349 tccgcggcgaggcgctcgaactgca 3373
>gb|AE004616.1| Pseudomonas aeruginosa PAO1, section 177 of 529 of the complete genome Length = 11519 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 tccgcggcgaggcgctcgacctgca 366 ||||||||||||||||||| ||||| Sbjct: 4583 tccgcggcgaggcgctcgaactgca 4607
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 298 cctggccgacgagatcgcgctcgtcgacgcgct 330 |||||||| |||||||||||||| || |||||| Sbjct: 4311163 cctggccggcgagatcgcgctcgccgccgcgct 4311195 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 327 cgctccccgacaagctccgcggcga 351 |||||| |||||||||||||||||| Sbjct: 2279344 cgctcctcgacaagctccgcggcga 2279368
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 347 ggcgaggcgctcgacctgcagcacgccgccgcc 379 |||||||||||||||||| |||||||||||| Sbjct: 449759 ggcgaggcgctcgacctggcccacgccgccgcc 449727
>dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091D19, full insert sequence Length = 3265 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 ccaccccgacctcctccgccg 212 ||||||||||||||||||||| Sbjct: 124 ccaccccgacctcctccgccg 144
>dbj|AK063436.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-E06, full insert sequence Length = 1661 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 cgccgccgccttccctcccgc 390 ||||||||||||||||||||| Sbjct: 163 cgccgccgccttccctcccgc 143
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 gatcgcgctcgtcgacgcgct 330 ||||||||||||||||||||| Sbjct: 851933 gatcgcgctcgtcgacgcgct 851913
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 cgccgccgccttccctcccgc 390 ||||||||||||||||||||| Sbjct: 8159275 cgccgccgccttccctcccgc 8159295
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ccaccccgacctcctccgccg 212 ||||||||||||||||||||| Sbjct: 17572979 ccaccccgacctcctccgccg 17572959
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ccaccccgacctcctccgccg 212 ||||||||||||||||||||| Sbjct: 110944 ccaccccgacctcctccgccg 110924
>gb|AC152974.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0153K02, complete sequence Length = 40117 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 cgccgccgccttccctcccgc 390 ||||||||||||||||||||| Sbjct: 8528 cgccgccgccttccctcccgc 8548
>ref|NM_193148.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 315 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gccgccgccttccctcccgc 390 |||||||||||||||||||| Sbjct: 80 gccgccgccttccctcccgc 99
>gb|AY019854.1| Oryza sativa microsatellite MRG2179 containing (CT)X12, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 tcccattccacccccttccc 88 |||||||||||||||||||| Sbjct: 53 tcccattccacccccttccc 72
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ggcgctcgacctgcagcacg 371 |||||||||||||||||||| Sbjct: 488951 ggcgctcgacctgcagcacg 488970
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gaacctggccgacgagatcg 314 |||||||||||||||||||| Sbjct: 2488505 gaacctggccgacgagatcg 2488486
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tcgcgctcgtcgacgcgctc 331 |||||||||||||||||||| Sbjct: 1126976 tcgcgctcgtcgacgcgctc 1126957
>gb|BT013913.1| Lycopersicon esculentum clone 132910F, mRNA sequence Length = 1396 Score = 40.1 bits (20), Expect = 5.8 Identities = 83/104 (79%) Strand = Plus / Plus Query: 224 cgcctcaccaagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagacc 283 |||| |||||| |||||||||||||| | ||| ||||| || ||||| || || || || Sbjct: 185 cgccacaccaaaatctccgtcatcggcgtcggaaacgtcggtatggcaattgcacaaaca 244 Query: 284 atcctcacccagaacctggccgacgagatcgcgctcgtcgacgc 327 ||||| || || |||| | ||||||| | || ||||||||||| Sbjct: 245 atcctaacacaagacctagtcgacgagcttgcactcgtcgacgc 288
>gb|AC144453.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0050A24, complete sequence Length = 142574 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 398 catcgcctccggcaccgacgccgccgtcacca 429 ||||||| ||| ||||| |||||||||||||| Sbjct: 27073 catcgccgccgccaccgccgccgccgtcacca 27042
>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06, complete sequence Length = 179695 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 398 catcgcctccggcaccgacgccgccgtcacca 429 ||||||| ||| ||||| |||||||||||||| Sbjct: 156197 catcgccgccgccaccgccgccgccgtcacca 156166
>gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB), ORFC (orfC), ORFD (orfD), ORFE (orfE), ORFF (orfF), ORFG (orfG), ORFH (orfH), LinX1 (linX1), LinX2 (linX2), and LinA (linA) genes, complete cds; insertion sequence IS6100A, complete sequence; ORFJ' (orfJ') and ORFK (orfK) genes, complete cds; insertion sequence IS6100B, complete sequence; LinC (linC) gene, complete cds; insertion sequence IS6100C, complete sequence; and 'ORFN ('orfN), ORFO (orfO), ORFP (orfP), ORFQ (orfQ), ORFR (orfR), ORFS (orfS), ORFT (orfT), ORFU (orfU), ORFV (orfV), ORFW (orfW), ORFX (orfX), and ORFY (orfY) genes, complete cds Length = 41034 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 catcgcctccggcaccgacg 417 |||||||||||||||||||| Sbjct: 16770 catcgcctccggcaccgacg 16789
>ref|XM_921089.2| PREDICTED: Mus musculus hypothetical LOC634280 (LOC634280), mRNA Length = 792 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgccgccgccttccctcccg 389 |||||||||||||||||||| Sbjct: 726 cgccgccgccttccctcccg 745
>ref|XM_898698.2| PREDICTED: Mus musculus hypothetical LOC625276 (LOC625276), mRNA Length = 792 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgccgccgccttccctcccg 389 |||||||||||||||||||| Sbjct: 726 cgccgccgccttccctcccg 745
>ref|XM_859100.1| PREDICTED: Canis familiaris hypothetical protein LOC609353 (LOC609353), mRNA Length = 459 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 acgccgccgccttccctccc 388 |||||||||||||||||||| Sbjct: 62 acgccgccgccttccctccc 81
>gb|AF471351.1| Homo sapiens clone 52-1m Ig heavy chain variable region, VH3 family mRNA, partial cds Length = 345 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 agcgtcccattccacccccttccc 88 |||| ||||||||||||||||||| Sbjct: 147 agcgacccattccacccccttccc 124
>emb|X64420.1|SCHISD S.coelicolor hisD gene for L-histidinol:NAD+ oxidoreductase Length = 2357 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 cggcgaggcgctcgacctgcagcacgcc 373 |||||| |||||||||||| |||||||| Sbjct: 455 cggcgacgcgctcgacctggagcacgcc 428
>emb|BX039974.1|CNS0930A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC10CB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 689 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ttccacccccttcccaccctgtcg 97 |||| ||||||||||||||||||| Sbjct: 371 ttcctcccccttcccaccctgtcg 394
>emb|Y10602.1|LELDH1GN Lycopersicon esculentum ldh1 gene Length = 3108 Score = 40.1 bits (20), Expect = 5.8 Identities = 83/104 (79%) Strand = Plus / Plus Query: 224 cgcctcaccaagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagacc 283 |||| |||||| |||||||||||||| | ||| ||||| || ||||| || || || || Sbjct: 1075 cgccacaccaaaatctccgtcatcggcgtcggaaacgtcggtatggcaattgcacaaaca 1134 Query: 284 atcctcacccagaacctggccgacgagatcgcgctcgtcgacgc 327 ||||| || || |||| | ||||||| | || ||||||||||| Sbjct: 1135 atcctaacacaagacctagtcgacgagcttgcactcgtcgacgc 1178
>emb|Y08887.1|LELDH1 Lycopersicon esculentum mRNA for L-lactate dehydrogenase, clone LDH1 Length = 1432 Score = 40.1 bits (20), Expect = 5.8 Identities = 83/104 (79%) Strand = Plus / Plus Query: 224 cgcctcaccaagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagacc 283 |||| |||||| |||||||||||||| | ||| ||||| || ||||| || || || || Sbjct: 230 cgccacaccaaaatctccgtcatcggcgtcggaaacgtcggtatggcaattgcacaaaca 289 Query: 284 atcctcacccagaacctggccgacgagatcgcgctcgtcgacgc 327 ||||| || || |||| | ||||||| | || ||||||||||| Sbjct: 290 atcctaacacaagacctagtcgacgagcttgcactcgtcgacgc 333
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 caagctccgcggcgaggcgctcga 360 ||||||||||||||| |||||||| Sbjct: 227354 caagctccgcggcgacgcgctcga 227377
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tcgcgctcgtcgacgcgctc 331 |||||||||||||||||||| Sbjct: 2442882 tcgcgctcgtcgacgcgctc 2442863
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 cggcgaggcgctcgacctgcagcacgcc 373 |||||| |||||||||||| |||||||| Sbjct: 101602 cggcgacgcgctcgacctggagcacgcc 101629
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 tccggcaccgacgccgccgtcacc 428 ||||||||||||||| |||||||| Sbjct: 28125 tccggcaccgacgccaccgtcacc 28102
>gb|AF416331.1| Ruegeria sp. PR1b plasmid pSD25, complete sequence Length = 148650 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gccgtcccgcaccgccgcct 228 |||||||||||||||||||| Sbjct: 10887 gccgtcccgcaccgccgcct 10868
>gb|AE011805.1| Xanthomonas axonopodis pv. citri str. 306, section 183 of 469 of the complete genome Length = 10303 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agaccatcctcacccagaacctgg 302 |||||||||||||| ||||||||| Sbjct: 3278 agaccatcctcaccgagaacctgg 3301
>gb|AE012463.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 371 of 460 of the complete genome Length = 10629 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 gcaccgacgccgccgtcacc 428 |||||||||||||||||||| Sbjct: 7917 gcaccgacgccgccgtcacc 7936
>gb|DQ399710.1| Sphingomonas sp. BHC-A maleylacetate reductase (linF2) gene, complete cds Length = 1059 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 catcgcctccggcaccgacg 417 |||||||||||||||||||| Sbjct: 822 catcgcctccggcaccgacg 803
>dbj|AB177985.1| Sphingobium japonicum genes for putative glutathione S transferase, hypothetical protein, maleylacetate reductase, putative LysR-type transcriptional regulator, 2,6-Dichloro-p-hydroquinone 1,2-dioxygenase, putative Na+ H+ antiporter, putative arylsulfatase precursor, putative glutathione transferase, complete and partial cds Length = 9888 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 catcgcctccggcaccgacg 417 |||||||||||||||||||| Sbjct: 3090 catcgcctccggcaccgacg 3109
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cgcggcgaggcgctcgacct 363 |||||||||||||||||||| Sbjct: 84639 cgcggcgaggcgctcgacct 84658
>dbj|AK144424.1| Mus musculus 16 days neonate male medulla oblongata cDNA, RIKEN full-length enriched library, clone:G630066H01 product:unclassifiable, full insert sequence Length = 2163 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ccaccccgacctcctccgcc 211 |||||||||||||||||||| Sbjct: 1084 ccaccccgacctcctccgcc 1103
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gcaccgacgccgccgtcacc 428 |||||||||||||||||||| Sbjct: 864867 gcaccgacgccgccgtcacc 864848
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 tcgcgctcgtcgacgcgctc 331 |||||||||||||||||||| Sbjct: 291459 tcgcgctcgtcgacgcgctc 291478
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ccggcaccgacgccgccgtc 425 |||||||||||||||||||| Sbjct: 14463495 ccggcaccgacgccgccgtc 14463476
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgtcgtcgctgtcggagct 129 |||||||||||||||||||| Sbjct: 14187936 gcgtcgtcgctgtcggagct 14187955
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gccgccgccttccctcccgc 390 |||||||||||||||||||| Sbjct: 18863925 gccgccgccttccctcccgc 18863944 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cccattccacccccttccca 89 |||||||||||||||||||| Sbjct: 10289891 cccattccacccccttccca 10289910
>gb|AE004915.1| Pseudomonas aeruginosa PAO1, section 476 of 529 of the complete genome Length = 9980 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 ccagaacctggccgacgagatcgc 315 ||||| |||||||||||||||||| Sbjct: 2988 ccagagcctggccgacgagatcgc 3011
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cccattccacccccttccca 89 |||||||||||||||||||| Sbjct: 155205 cccattccacccccttccca 155224
>dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1074C08 Length = 165701 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gccgccgccttccctcccgc 390 |||||||||||||||||||| Sbjct: 36315 gccgccgccttccctcccgc 36334
>dbj|AP005493.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0078D03 Length = 176593 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgtcgtcgctgtcggagct 129 |||||||||||||||||||| Sbjct: 92225 gcgtcgtcgctgtcggagct 92244
>dbj|AP004641.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147B04 Length = 142956 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gccgccgccttccctcccgc 390 |||||||||||||||||||| Sbjct: 70936 gccgccgccttccctcccgc 70955
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gcgctcgtcgacgcgctccc 333 |||||||||||||||||||| Sbjct: 1622990 gcgctcgtcgacgcgctccc 1623009
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 ctccggcaccgacgccgccg 423 |||||||||||||||||||| Sbjct: 3478169 ctccggcaccgacgccgccg 3478188
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 406 ccggcaccgacgccgccgtcacca 429 ||||||||| |||||||||||||| Sbjct: 4288603 ccggcaccgtcgccgccgtcacca 4288626
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 tcccattccacccccttccc 88 |||||||||||||||||||| Sbjct: 32446 tcccattccacccccttccc 32465
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ccggcaccgacgccgccgtc 425 |||||||||||||||||||| Sbjct: 63060 ccggcaccgacgccgccgtc 63041
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgccgccgccttccctcccg 389 |||||||||||||||||||| Sbjct: 23979 cgccgccgccttccctcccg 23998
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ccgccgccttccctcccgcg 391 |||||||||||||||||||| Sbjct: 90453 ccgccgccttccctcccgcg 90434
>dbj|AP004637.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0703C03 Length = 162620 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgtcgtcgctgtcggagct 129 |||||||||||||||||||| Sbjct: 3492 gcgtcgtcgctgtcggagct 3511
>dbj|AK108337.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-A07, full insert sequence Length = 790 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgtcgtcgctgtcggagct 129 |||||||||||||||||||| Sbjct: 291 gcgtcgtcgctgtcggagct 272
>dbj|AK102137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085I06, full insert sequence Length = 1965 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 tcccattccacccccttccc 88 |||||||||||||||||||| Sbjct: 129 tcccattccacccccttccc 148
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ctcgtcgacgcgctccccga 336 |||||||||||||||||||| Sbjct: 616726 ctcgtcgacgcgctccccga 616707
>emb|CR942559.2| Xenopus tropicalis finished cDNA, clone TGas003c15 Length = 2182 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 ccgacgccgccgtcaccaag 431 |||||||||||||||||||| Sbjct: 2063 ccgacgccgccgtcaccaag 2082
>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds; chivosazol biosynthetic gene cluster, complete sequence; and hypothetical protein gene, complete cds Length = 96547 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 gctccgcggcgaggcgctcgacct 363 |||||||||||| ||||||||||| Sbjct: 7421 gctccgcggcgatgcgctcgacct 7398
>dbj|AP001791.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-427G12, complete sequence Length = 140000 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cccattccacccccttccca 89 |||||||||||||||||||| Sbjct: 96018 cccattccacccccttccca 96037
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 tcgcgctcgtcgacgcgctc 331 |||||||||||||||||||| Sbjct: 697311 tcgcgctcgtcgacgcgctc 697330
>emb|AL833804.16| Mouse DNA sequence from clone RP23-20A6 on chromosome 2, complete sequence Length = 200521 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ccaccccgacctcctccgcc 211 |||||||||||||||||||| Sbjct: 89317 ccaccccgacctcctccgcc 89336
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 cggccaccccgacctcctccgccg 212 |||||||| ||||||||||||||| Sbjct: 3396165 cggccaccacgacctcctccgccg 3396142
>dbj|AB070934.1| Streptomyces avermitilis carotenoid biosynthetic gene cluster Length = 14304 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 ctggccgacgagatcgcgctcgtc 322 ||||||||||||||||||| |||| Sbjct: 11215 ctggccgacgagatcgcgcacgtc 11238
>dbj|AB057771.1| Oryza sativa (japonica cultivar-group) PPOX-I/Protox-I gene for protoporphyrinogen oxidase I, complete cds Length = 5441 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cccattccacccccttccca 89 |||||||||||||||||||| Sbjct: 801 cccattccacccccttccca 820 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,905,758 Number of Sequences: 3902068 Number of extensions: 2905758 Number of successful extensions: 83182 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76397 Number of HSP's gapped (non-prelim): 6781 length of query: 433 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 411 effective length of database: 17,147,199,772 effective search space: 7047499106292 effective search space used: 7047499106292 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
