>AIR12_ARATH (Q94BT2) Auxin-induced in root cultures protein 12 precursor|
          Length = 252

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +3

Query: 192 YAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSG-WVAWGVNQDAPAMAGAR 356
           +  C  LP   + L +TY++ N++L  AF  +    +G WVAW +N     MAG++
Sbjct: 40  FDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAINPTGTKMAGSQ 95

>KHSE_PYRKO (Q5JH53) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 292

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 204 IALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNQDAPAMAGA 353
           IALP +   + W      A LDA   G+F+S SG   + + +D  A+  A
Sbjct: 217 IALPYRLRLMPWFARVWKAALDAGAYGAFVSGSGPAIFALGEDLHAIGKA 266

>PUR2_RHILO (Q986A5) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)|
           (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase)
          Length = 425

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 171 TSTPVKAYAKCIALPTQGATLAWTYDARNATLDAAFTGSF 290
           T  P+   A  +A   +G T+A T D   A LDA F GSF
Sbjct: 136 TGAPIVIKADGLAAG-KGVTVAMTSDEARAALDACFEGSF 174

>NDK_DESVH (Q729L7) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP|
           kinase) (Nucleoside-2-P kinase)
          Length = 139

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -3

Query: 313 ATHPDGEMKDPVKAASSVALRASYVHASVAPCVGSAMHLAYAFTGVDVV 167
           AT+P    +  ++   +V+L A+ VH S AP   +A  ++Y F  +++V
Sbjct: 91  ATNPANAAEGTIRKKYAVSLEANSVHGSDAP-ETAAFEISYFFNALEIV 138

>RNH_ZYMMO (O69014) Ribonuclease H (EC 3.1.26.4) (RNase H)|
          Length = 156

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 364 AITRAPAMAGASWLTPHATHPDGEMKDPVKAASSVAL 254
           A+TR   +A   W+  HA HPD E  D + + +++AL
Sbjct: 115 ALTRQHDIAW-KWVKGHAGHPDNERADQLASDAAIAL 150

>FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.13.3)|
          Length = 777

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -3

Query: 349 PAMAGASWLTPHATHPDGEMKDPVKAASSVALRASYVHASVAP 221
           PA+AGA  + P    P   +  PV   ++VA   + V A VAP
Sbjct: 131 PAIAGARPVAPPPAPPPAPVAAPVVTPAAVAAPPAPVQAPVAP 173

>BGAL_HUMAN (P16278) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase)
          Length = 677

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 234 AWTYDARNATLDAAFTGSFISPSG 305
           AW +++ N TL A + G+F  PSG
Sbjct: 538 AWAHNSSNYTLPAFYMGNFSIPSG 561

>BGAL_MACFA (Q60HF6) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase)
          Length = 682

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 234 AWTYDARNATLDAAFTGSFISPSG 305
           AW + + N TL A + G+F  PSG
Sbjct: 538 AWAHSSSNYTLPAFYVGNFSIPSG 561

>BGAM_HUMAN (P16279) Beta-galactosidase-related protein precursor|
           (Beta-galactosidase-like protein) (S-Gal)
           (Elastin-binding protein) (EBP)
          Length = 546

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 234 AWTYDARNATLDAAFTGSFISPSG 305
           AW +++ N TL A + G+F  PSG
Sbjct: 407 AWAHNSSNYTLPAFYMGNFSIPSG 430

>NDK_BRUME (Q8YGA4) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP|
           kinase) (Nucleoside-2-P kinase)
          Length = 140

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = -3

Query: 313 ATHPDGEMKDPVKAASSVALRASYVHASVAPCVGSAMHLAYAFTGVDVV 167
           AT+P    +  ++ A ++++  + VH S AP   +A  +AY F+G ++V
Sbjct: 92  ATNPANADEGTIRKAFALSIGENSVHGSDAP-ETAAEEIAYWFSGTEIV 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,655,521
Number of Sequences: 219361
Number of extensions: 493087
Number of successful extensions: 1980
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)