>ref|XM_470576.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1254

 Score =  311 bits (157), Expect = 9e-82
 Identities = 190/201 (94%)
 Strand = Plus / Plus

                                                                       
Query: 165 tgcacgacgtcgacgccggtgaaggcgtacgccaagtgcatcgcgctgccgacgcagggc 224
           |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcacgacgtcgacgccgttgaagacgtacgccaagtgcatcgcgctgccgacgcagggc 180

                                                                       
Query: 225 gcgacgctggcgtggacgtacgacgcgcgcaacgccacgctggacgcggccttcacgggg 284
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| 
Sbjct: 181 gcgacgctggcgtggacgtacgacgcgcgcaacgcgacgctggacgcggcgttcacgggc 240

                                                                       
Query: 285 tccttcatctcgccgtcgggatgggtggcgtggggcgtcaaccaggacgcgccggccatg 344
           ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 241 tccttcatctcgccgtcgggatgggtggcctggggcgtcaacaaggacgcgccggcgatg 300

                                
Query: 345 gccggggcgcgcgtgatcgcc 365
            |||| ||||||||| |||||
Sbjct: 301 accggcgcgcgcgtgctcgcc 321

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  311 bits (157), Expect = 9e-82
 Identities = 190/201 (94%)
 Strand = Plus / Minus

                                                                           
Query: 165     tgcacgacgtcgacgccggtgaaggcgtacgccaagtgcatcgcgctgccgacgcagggc 224
               |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4871771 tgcacgacgtcgacgccgttgaagacgtacgccaagtgcatcgcgctgccgacgcagggc 4871712

                                                                           
Query: 225     gcgacgctggcgtggacgtacgacgcgcgcaacgccacgctggacgcggccttcacgggg 284
               ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| 
Sbjct: 4871711 gcgacgctggcgtggacgtacgacgcgcgcaacgcgacgctggacgcggcgttcacgggc 4871652

                                                                           
Query: 285     tccttcatctcgccgtcgggatgggtggcgtggggcgtcaaccaggacgcgccggccatg 344
               ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 4871651 tccttcatctcgccgtcgggatgggtggcctggggcgtcaacaaggacgcgccggcgatg 4871592

                                    
Query: 345     gccggggcgcgcgtgatcgcc 365
                |||| ||||||||| |||||
Sbjct: 4871591 accggcgcgcgcgtgctcgcc 4871571

>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score =  311 bits (157), Expect = 9e-82
 Identities = 190/201 (94%)
 Strand = Plus / Plus

                                                                          
Query: 165    tgcacgacgtcgacgccggtgaaggcgtacgccaagtgcatcgcgctgccgacgcagggc 224
              |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 123776 tgcacgacgtcgacgccgttgaagacgtacgccaagtgcatcgcgctgccgacgcagggc 123835

                                                                          
Query: 225    gcgacgctggcgtggacgtacgacgcgcgcaacgccacgctggacgcggccttcacgggg 284
              ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| 
Sbjct: 123836 gcgacgctggcgtggacgtacgacgcgcgcaacgcgacgctggacgcggcgttcacgggc 123895

                                                                          
Query: 285    tccttcatctcgccgtcgggatgggtggcgtggggcgtcaaccaggacgcgccggccatg 344
              ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 123896 tccttcatctcgccgtcgggatgggtggcctggggcgtcaacaaggacgcgccggcgatg 123955

                                   
Query: 345    gccggggcgcgcgtgatcgcc 365
               |||| ||||||||| |||||
Sbjct: 123956 accggcgcgcgcgtgctcgcc 123976

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  311 bits (157), Expect = 9e-82
 Identities = 190/201 (94%)
 Strand = Plus / Minus

                                                                           
Query: 165     tgcacgacgtcgacgccggtgaaggcgtacgccaagtgcatcgcgctgccgacgcagggc 224
               |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4870986 tgcacgacgtcgacgccgttgaagacgtacgccaagtgcatcgcgctgccgacgcagggc 4870927

                                                                           
Query: 225     gcgacgctggcgtggacgtacgacgcgcgcaacgccacgctggacgcggccttcacgggg 284
               ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| 
Sbjct: 4870926 gcgacgctggcgtggacgtacgacgcgcgcaacgcgacgctggacgcggcgttcacgggc 4870867

                                                                           
Query: 285     tccttcatctcgccgtcgggatgggtggcgtggggcgtcaaccaggacgcgccggccatg 344
               ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 4870866 tccttcatctcgccgtcgggatgggtggcctggggcgtcaacaaggacgcgccggcgatg 4870807

                                    
Query: 345     gccggggcgcgcgtgatcgcc 365
                |||| ||||||||| |||||
Sbjct: 4870806 accggcgcgcgcgtgctcgcc 4870786

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 257     cgccacgctggacgcggccttc 278
               ||||||||||||||||||||||
Sbjct: 1920405 cgccacgctggacgcggccttc 1920384

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 295     cgccgtcgggatgggtggcgtgggg 319
               |||||||||||||||||||| ||||
Sbjct: 3595148 cgccgtcgggatgggtggcgcgggg 3595124

>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 221    gggcgcgacgctggcgtggac 241
              |||||||||||||||||||||
Sbjct: 161787 gggcgcgacgctggcgtggac 161807

>gb|AE010315.1| Methanopyrus kandleri AV19 section 14 of 157 of the complete genome
          Length = 13428

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  cgcggccttcacggggtcct 288
            ||||||||||||||||||||
Sbjct: 5492 cgcggccttcacggggtcct 5511

>gb|AC152495.1| Zea mays BAC clone Z486N13, complete sequence
          Length = 169348

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tcgttgtggtcgtcgtcctt 125
              ||||||||||||||||||||
Sbjct: 144438 tcgttgtggtcgtcgtcctt 144457



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tcgttgtggtcgtcgtcctt 125
             ||||||||||||||||||||
Sbjct: 59784 tcgttgtggtcgtcgtcctt 59803

>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence
          Length = 213888

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  tcgttgtggtcgtcgtcctt 125
            ||||||||||||||||||||
Sbjct: 2602 tcgttgtggtcgtcgtcctt 2621

>gb|AC165178.2| Zea mays clone ZMMBBb-272P17, complete sequence
          Length = 131485

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tcgttgtggtcgtcgtcctt 125
              ||||||||||||||||||||
Sbjct: 111550 tcgttgtggtcgtcgtcctt 111569

>gb|AC165267.2| Zea mays clone ZMMBBb-151F20, complete sequence
          Length = 115478

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tcgttgtggtcgtcgtcctt 125
             ||||||||||||||||||||
Sbjct: 37965 tcgttgtggtcgtcgtcctt 37984

>gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete sequence
          Length = 132549

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tcgttgtggtcgtcgtcctt 125
              ||||||||||||||||||||
Sbjct: 125225 tcgttgtggtcgtcgtcctt 125244

>gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family
             from Zea mays, complete sequence
          Length = 116115

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   tcgttgtggtcgtcgtcctt 125
             ||||||||||||||||||||
Sbjct: 54604 tcgttgtggtcgtcgtcctt 54585

>gb|AF546188.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family
             from Zea mays, complete sequence
          Length = 203363

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   tcgttgtggtcgtcgtcctt 125
             ||||||||||||||||||||
Sbjct: 94108 tcgttgtggtcgtcgtcctt 94089

>gb|AF466932.1| Zea mays clone BAC 206C17, complete sequence
          Length = 99156

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   tcgttgtggtcgtcgtcctt 125
             ||||||||||||||||||||
Sbjct: 41049 tcgttgtggtcgtcgtcctt 41030

>gb|AF466931.1| Zea mays clone BAC 163K15, complete sequence
          Length = 95078

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   tcgttgtggtcgtcgtcctt 125
             ||||||||||||||||||||
Sbjct: 50705 tcgttgtggtcgtcgtcctt 50686

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 331     acgcgccggccatggccggggcgcgcgt 358
               ||||| |||| |||||||||||||||||
Sbjct: 1159705 acgcggcggcgatggccggggcgcgcgt 1159732

>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S
             ribosomal protein S8 (Z214A02.25), and putative casein
             kinase I (Z214A02.27) genes, complete cds
          Length = 158797

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   tcgttgtggtcgtcgtcctt 125
             ||||||||||||||||||||
Sbjct: 68123 tcgttgtggtcgtcgtcctt 68104

>gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence
          Length = 181627

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tcgttgtggtcgtcgtcctt 125
              ||||||||||||||||||||
Sbjct: 115182 tcgttgtggtcgtcgtcctt 115201

>gb|AC157776.1| Zea mays chromosome 8 BAC clone ZMMBBb0483G05, complete sequence
          Length = 147470

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   tcgttgtggtcgtcgtcctt 125
             ||||||||||||||||||||
Sbjct: 24736 tcgttgtggtcgtcgtcctt 24717

>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete
             cds
          Length = 160480

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tcgttgtggtcgtcgtcctt 125
             ||||||||||||||||||||
Sbjct: 76072 tcgttgtggtcgtcgtcctt 76091

>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf
             copia_LTR and Huck gypsy_LTR retrotransposons, complete
             sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR
             and Opie1 copia_LTR retrotransposons, complete sequence;
             Ji copia_LTR retrotransposon, complete sequence; and
             unknown protein (adh1B), cyclin H-1 (adh1C), unknown
             protein (adh1D), hypothetical protein (adh1E), and unknown
             protein (adh1F) genes, complete cds
          Length = 126039

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tcgttgtggtcgtcgtcctt 125
             ||||||||||||||||||||
Sbjct: 60843 tcgttgtggtcgtcgtcctt 60862


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,513,586
Number of Sequences: 3902068
Number of extensions: 1513586
Number of successful extensions: 33297
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32902
Number of HSP's gapped (non-prelim): 395
length of query: 369
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 347
effective length of database: 17,147,199,772
effective search space: 5950078320884
effective search space used: 5950078320884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)