ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart50h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RS3A_ARATH (Q42262) 40S ribosomal protein S3a 147 8e-36
2RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein) 145 2e-35
3RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific ... 143 1e-34
4RS3A_HELAN (P49198) 40S ribosomal protein S3a 142 1e-34
5RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein) 135 2e-32
6RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment) 118 4e-27
7RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformatio... 118 4e-27
8RS3A_MOUSE (P97351) 40S ribosomal protein S3a 118 4e-27
9RS3A_HUMAN (P61247) 40S ribosomal protein S3a 118 4e-27
10RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a 118 4e-27
11RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a) 118 4e-27
12RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a 118 4e-27
13RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformat... 117 7e-27
14RS3A_XENTR (Q642T2) 40S ribosomal protein S3a 117 7e-27
15RS3A_XENLA (Q801S3) 40S ribosomal protein S3a 117 7e-27
16RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a 116 1e-26
17RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a 116 1e-26
18RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a 115 2e-26
19RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a 115 3e-26
20RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich prote... 114 4e-26
21RS3A_CAEEL (P48154) 40S ribosomal protein S3a 114 7e-26
22RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1) 112 3e-25
23RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein) 109 1e-24
24RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a 109 1e-24
25RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A) 108 3e-24
26RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A) 107 9e-24
27RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A) 106 1e-23
28RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B) 106 2e-23
29RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein) 103 8e-23
30RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae 47 1e-05
31RS3A_METTH (O27630) 30S ribosomal protein S3Ae 44 9e-05
32RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae 42 3e-04
33RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae 41 8e-04
34RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae 40 0.002
35RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae 38 0.005
36RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae 36 0.025
37RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae 35 0.033
38RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae 35 0.043
39RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae 35 0.043
40RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae 35 0.056
41RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae 34 0.073
42RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae 33 0.21
43TAGC_BACSU (P27622) Putative major teichoic acid biosynthesis pr... 31 0.81
44LAT_HUMAN (O43561) Linker for activation of T-cells family membe... 30 1.4
45BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 prec... 30 1.8
46BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 prec... 30 1.8
47RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF 30 1.8
48ACDD_ARCFU (O29870) Acetyl-CoA decarbonylase/synthase complex de... 29 3.1
49HEM0_BRARE (Q9YHT4) 5-aminolevulinate synthase, erythroid-specif... 29 3.1
50POL_BLVJ (P03361) Pol polyprotein [Contains: Reverse transcripta... 29 3.1
51VG78_ICHV1 (Q00167) Hypothetical gene 78 zinc-binding protein 28 4.0
52ADA_ECOLI (P06134) Regulatory protein ada (Regulatory protein of... 28 4.0
53LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late en... 28 4.0
54ACM3_CHICK (P49578) Muscarinic acetylcholine receptor M3 28 5.3
55YL54_CAEEL (P34434) Hypothetical protein F44E2.4 28 5.3
56LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-bind... 28 5.3
57PAK4_HUMAN (O96013) Serine/threonine-protein kinase PAK 4 (EC 2.... 28 6.9
58CU20_TENMO (P26967) Adult-specific cuticular protein ACP-20 prec... 28 6.9
59POL_BLVAU (P25059) Pol polyprotein [Contains: Reverse transcript... 28 6.9
60SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sul... 28 6.9
61ZYX_MOUSE (Q62523) Zyxin 27 9.0
62CO8A_HUMAN (P07357) Complement component C8 alpha chain precurso... 27 9.0
63SYI_CORGL (Q8NNP0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 27 9.0
64LDLR_RABIT (P20063) Low-density lipoprotein receptor (LDL recept... 27 9.0
65LCE4A_HUMAN (Q5TA78) Late cornified envelope protein 4A (Late en... 27 9.0
66METE_SULSO (Q980A9) Probable methylcobalamin:homocysteine methyl... 27 9.0
67DDL_HAEIN (P44405) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a... 27 9.0 
>RS3A_ARATH (Q42262) 40S ribosomal protein S3a|
          Length = 261

 Score =  147 bits (370), Expect = 8e-36
 Identities = 73/86 (84%), Positives = 77/86 (89%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           AVDPF+KK WYD+KAP  FT+RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED 
Sbjct: 19  AVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDN 78

Query: 316 AYRKIRLRAEDVQGMNVLTKLLGHGF 393
           AYRKIRLRAEDVQG NVLT+  G  F
Sbjct: 79  AYRKIRLRAEDVQGRNVLTQFWGMDF 104
to top
>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 261

 Score =  145 bits (367), Expect = 2e-35
 Identities = 72/85 (84%), Positives = 74/85 (87%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF KK WYDIKAP +F  RN+GKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLGHGF 393
           YRKIRLRAEDVQG NVLT   G  F
Sbjct: 80  YRKIRLRAEDVQGKNVLTNFWGMSF 104
to top
>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein|
           BIS289)
          Length = 261

 Score =  143 bits (360), Expect = 1e-34
 Identities = 72/85 (84%), Positives = 73/85 (85%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF KK WYDIKAP  FT RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADL  DEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLGHGF 393
           YRKIRLRAEDVQG NVLT+  G  F
Sbjct: 80  YRKIRLRAEDVQGRNVLTQFWGMDF 104
to top
>RS3A_HELAN (P49198) 40S ribosomal protein S3a|
          Length = 259

 Score =  142 bits (359), Expect(2) = 1e-34
 Identities = 70/83 (84%), Positives = 74/83 (89%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A DPF+KK WYDIKAP LF +RNVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQNDED 
Sbjct: 19  AADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDH 78

Query: 316 AYRKIRLRAEDVQGMNVLTKLLG 384
           +YRKIRLRAEDVQG NVLT   G
Sbjct: 79  SYRKIRLRAEDVQGKNVLTNFWG 101



 Score = 21.6 bits (44), Expect(2) = 1e-34
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 374 NFWGMDFT 397
           NFWGMD T
Sbjct: 98  NFWGMDVT 105
to top
>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 259

 Score =  135 bits (341), Expect = 2e-32
 Identities = 65/86 (75%), Positives = 73/86 (84%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A DPF KK WYDIKAP +F+ RNVGKTLV+RTQGTKIASEGL+HRVFE+SLADLQ DED 
Sbjct: 19  AADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDH 78

Query: 316 AYRKIRLRAEDVQGMNVLTKLLGHGF 393
           ++RKIRLRAED+QG NVLT   G  F
Sbjct: 79  SFRKIRLRAEDIQGKNVLTNFWGMDF 104
to top
>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)|
          Length = 260

 Score =  118 bits (295), Expect = 4e-27
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 18  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 76

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 77  FRKFKLITEDVQGKNCLTNFHG 98
to top
>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector|
           protein) [Contains: 40S ribosomal protein S3b]
          Length = 263

 Score =  118 bits (295), Expect = 4e-27
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_MOUSE (P97351) 40S ribosomal protein S3a|
          Length = 263

 Score =  118 bits (295), Expect = 4e-27
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_HUMAN (P61247) 40S ribosomal protein S3a|
          Length = 263

 Score =  118 bits (295), Expect = 4e-27
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a|
          Length = 263

 Score =  118 bits (295), Expect = 4e-27
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)|
          Length = 263

 Score =  118 bits (295), Expect = 4e-27
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a|
          Length = 263

 Score =  118 bits (295), Expect = 4e-27
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector|
           protein)
          Length = 265

 Score =  117 bits (293), Expect = 7e-27
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a|
          Length = 263

 Score =  117 bits (293), Expect = 7e-27
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a|
          Length = 263

 Score =  117 bits (293), Expect = 7e-27
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a|
          Length = 266

 Score =  116 bits (290), Expect = 1e-26
 Identities = 58/82 (70%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGT+IAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLVTEDVQGKNCLTNFHG 101
to top
>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a|
          Length = 263

 Score =  116 bits (290), Expect = 1e-26
 Identities = 58/82 (70%), Positives = 66/82 (80%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK  VFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGHVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a|
          Length = 263

 Score =  115 bits (289), Expect = 2e-26
 Identities = 58/82 (70%), Positives = 66/82 (80%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N L    G
Sbjct: 80  FRKFKLITEDVQGKNCLINFHG 101
to top
>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a|
          Length = 265

 Score =  115 bits (287), Expect = 3e-26
 Identities = 57/82 (69%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGT+IAS+GLK RV+EVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVYEVSLADLQNDE-VA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L  EDVQG N LT   G
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHG 101
to top
>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)|
          Length = 264

 Score =  114 bits (286), Expect = 4e-26
 Identities = 57/82 (69%), Positives = 67/82 (81%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFTKK+WYD+KAP +F  R +GKTLV+R+QGTKIAS+ LK RVFEVSLADLQNDE   
Sbjct: 21  VDPFTKKEWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDE-VT 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK +L AE+VQG NVLT   G
Sbjct: 80  FRKFKLIAEEVQGRNVLTNFSG 101
to top
>RS3A_CAEEL (P48154) 40S ribosomal protein S3a|
          Length = 256

 Score =  114 bits (284), Expect = 7e-26
 Identities = 57/79 (72%), Positives = 66/79 (83%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           AVDPF++K+WYDIKAP +F +R VGKTL++RTQGTKIASEGLK RVFEVSL DL N E  
Sbjct: 18  AVDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLNNSEAD 77

Query: 316 AYRKIRLRAEDVQGMNVLT 372
            +RK +L AEDVQG NVLT
Sbjct: 78  -FRKFKLIAEDVQGKNVLT 95
to top
>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)|
          Length = 255

 Score =  112 bits (279), Expect = 3e-25
 Identities = 53/85 (62%), Positives = 66/85 (77%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFT+K W+DIKAP  F +RNVGKTL++R+ G K A++GLK RVFEV LADLQ  ED +
Sbjct: 20  VDPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHS 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLGHGF 393
           YRKI+LR ++VQG N+LT   G  F
Sbjct: 80  YRKIKLRVDEVQGKNLLTNFHGLDF 104
to top
>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)|
          Length = 268

 Score =  109 bits (273), Expect = 1e-24
 Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQN--DED 312
           VDPFT+K WYD+KAP +F +R  GKTLV+RTQGTKIAS+GLK RVFEVSLADLQN  D +
Sbjct: 21  VDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAE 80

Query: 313 QAYRKIRLRAEDVQGMNVLTKLLG 384
           +++RK +L AE V G +VLT   G
Sbjct: 81  RSFRKFKLVAESVNGRDVLTNFHG 104
to top
>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a|
          Length = 247

 Score =  109 bits (273), Expect = 1e-24
 Identities = 58/85 (68%), Positives = 63/85 (74%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF+KK WYDIKAP        G+    RT GTKIAS+GL  RVFEVSLADLQNDEDQA
Sbjct: 20  VDPFSKKDWYDIKAPPRSRRARSGRRC-HRTAGTKIASDGLNFRVFEVSLADLQNDEDQA 78

Query: 319 YRKIRLRAEDVQGMNVLTKLLGHGF 393
           +RKI+LRAEDVQG NVLT   G  F
Sbjct: 79  FRKIKLRAEDVQGKNVLTNFWGMDF 103
to top
>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)|
          Length = 251

 Score =  108 bits (270), Expect = 3e-24
 Identities = 50/82 (60%), Positives = 64/82 (78%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF++K+WYDIKAP  F  +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ A
Sbjct: 20  VDPFSRKEWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHA 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK++LR ED+QG + LT   G
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNG 101
to top
>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)|
          Length = 254

 Score =  107 bits (266), Expect = 9e-24
 Identities = 51/85 (60%), Positives = 65/85 (76%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFT+K+W+DIKAP  F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ  ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHS 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLGHGF 393
           +RKI+LR ++VQG N+LT   G  F
Sbjct: 80  FRKIKLRVDEVQGKNLLTNFHGMDF 104
to top
>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)|
          Length = 251

 Score =  106 bits (265), Expect = 1e-23
 Identities = 49/82 (59%), Positives = 63/82 (76%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPF++K WYDIKAP  F  +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ +
Sbjct: 20  VDPFSRKDWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHS 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLG 384
           +RK++LR ED+QG + LT   G
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNG 101
to top
>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)|
          Length = 254

 Score =  106 bits (264), Expect = 2e-23
 Identities = 50/85 (58%), Positives = 65/85 (76%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           VDPFT+K+W+DIKAP  F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ  ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHS 79

Query: 319 YRKIRLRAEDVQGMNVLTKLLGHGF 393
           +RK++LR ++VQG N+LT   G  F
Sbjct: 80  FRKVKLRVDEVQGKNLLTNFHGMDF 104
to top
>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)|
          Length = 267

 Score =  103 bits (258), Expect = 8e-23
 Identities = 53/84 (63%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED-- 312
           VDPF++K WYD+KAP +F +R +GKTLV+RTQG +IAS+ LK RVFEVSLADLQ D D  
Sbjct: 21  VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPE 80

Query: 313 QAYRKIRLRAEDVQGMNVLTKLLG 384
           +++RK RL AEDVQ  NVL    G
Sbjct: 81  RSFRKFRLIAEDVQDRNVLCNFHG 104
to top
>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae|
          Length = 200

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 28/84 (33%), Positives = 40/84 (47%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A D +  K+WY + AP  F S+ +G T            E +  RV E +L DL  D  +
Sbjct: 13  AKDKWKMKEWYIVYAPDFFGSKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTK 65

Query: 316 AYRKIRLRAEDVQGMNVLTKLLGH 387
            + K+  +  DV+G N  TK  GH
Sbjct: 66  GHVKLYFQVYDVKGQNAYTKFKGH 89
to top
>RS3A_METTH (O27630) 30S ribosomal protein S3Ae|
          Length = 195

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 25/82 (30%), Positives = 42/82 (51%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D + +K+WY IK+P LF    +G      T  ++     LK RV E ++ +L  D  + Y
Sbjct: 11  DTWKEKKWYVIKSPKLFGENEIG------TTPSRDPDFLLKRRV-EATMRELTGDFSKQY 63

Query: 322 RKIRLRAEDVQGMNVLTKLLGH 387
            K++ + + V G    T+ +GH
Sbjct: 64  VKLKFQIDSVAGSEATTRFIGH 85
to top
>RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae|
          Length = 225

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 24/84 (28%), Positives = 43/84 (51%)
 Frame = +1

Query: 136 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 315
           A D +  K WYDI     +T ++ G  ++ +T     A+  L  R+ E+SL DL N+  +
Sbjct: 15  AKDTWKSKVWYDI-----YTPQSFGGDVIGQTPANDPAN--LIGRISEISLRDLTNEHSK 67

Query: 316 AYRKIRLRAEDVQGMNVLTKLLGH 387
              ++  + + V G N  ++ +GH
Sbjct: 68  HMTRMYFKVDGVSGNNATSQFVGH 91
to top
>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 26/82 (31%), Positives = 39/82 (47%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  K WY I AP +F +  VG+T            E +  RV E +L D+ +D  + +
Sbjct: 4   DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56

Query: 322 RKIRLRAEDVQGMNVLTKLLGH 387
            K+  R  DV+G    +K  GH
Sbjct: 57  IKVFFRIYDVEGTTAYSKFEGH 78
to top
>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae|
          Length = 203

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 25/83 (30%), Positives = 39/83 (46%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           +D +  K+WY+I+AP+      VG T+             L  R  E ++ +L ND  + 
Sbjct: 10  LDGWKSKEWYNIEAPVYLNRAIVGNTMAG-------DPSLLVGRNVETTVGELTNDMTKN 62

Query: 319 YRKIRLRAEDVQGMNVLTKLLGH 387
             K+ LR  +V G    T L+GH
Sbjct: 63  NTKVILRINNVVGDIATTDLMGH 85
to top
>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae|
          Length = 204

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = +1

Query: 139 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 318
           +D +  K+WY+I+AP       VG T+             L  R  E ++ +L ND  + 
Sbjct: 10  LDGWKSKEWYNIEAPAYLNRVIVGTTMAG-------DPSLLVGRNVETTVGELTNDMTKN 62

Query: 319 YRKIRLRAEDVQGMNVLTKLLGH 387
             K+ LR  +V G    T L+GH
Sbjct: 63  NTKVILRVNNVVGDIATTDLMGH 85
to top
>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae|
          Length = 193

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 25/82 (30%), Positives = 39/82 (47%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  K+W+ I AP  F     G+ ++  T     A++ L  +V E +L DL  D    Y
Sbjct: 9   DKWKLKKWFTIVAPKTF-----GEVVLGTTPAFD-ANQALNRKV-ETTLYDLTGDYSLVY 61

Query: 322 RKIRLRAEDVQGMNVLTKLLGH 387
             +  R   V+G  +LT+  GH
Sbjct: 62  VHLYFRVIGVEGDRLLTRFAGH 83
to top
>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQND--EDQ 315
           D +T K+W+ + AP  F    +G+T       +K+       R  E +LA+L ND     
Sbjct: 12  DKWTLKKWFTLIAPEYFGMAELGET--PADDASKVVG-----RTVETTLAELTNDYSNQN 64

Query: 316 AYRKIRLRAEDVQGMNVLTK 375
            Y+K+  +   V G N  TK
Sbjct: 65  TYKKLIFKVYRVAGDNAYTK 84
to top
>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 21/81 (25%), Positives = 38/81 (46%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           DP+  K+W+ + AP       +G   ++     +  ++ L  R  EVSL D+  D     
Sbjct: 20  DPWALKKWFSVYAPSY-----LGGVFLAEVPANE--AQKLLMRTLEVSLYDITKDISHLP 72

Query: 322 RKIRLRAEDVQGMNVLTKLLG 384
            K++ +   V+G+  LT+  G
Sbjct: 73  IKLKFQIHRVEGLKALTRFKG 93
to top
>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 23/82 (28%), Positives = 38/82 (46%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           D +  K+W+ + AP LF     G+T++  T       + L  RV E +L D+  D    +
Sbjct: 15  DTWRLKKWFKVVAPPLF-----GETVLGTTPADD--PDKLIGRVMETTLFDITGDYSYVH 67

Query: 322 RKIRLRAEDVQGMNVLTKLLGH 387
            K+  +   V+G    T+  GH
Sbjct: 68  VKMYFQVVRVEGDTAYTRFKGH 89
to top
>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae|
          Length = 213

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 19/78 (24%), Positives = 35/78 (44%)
 Frame = +1

Query: 154 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 333
           +K+WY ++AP  F    +GKT            + +  R  E +L +L ND  +   K+ 
Sbjct: 12  QKRWYTVQAPEQFDREVLGKTPAEE-------PDKVLGRTIETTLGELTNDASENNTKLT 64

Query: 334 LRAEDVQGMNVLTKLLGH 387
            +  +V   +  T+ + H
Sbjct: 65  FKINEVASDSAYTEFIRH 82
to top
>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae|
          Length = 208

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTL---VSRTQGTKIASEGLKHRVFEVSLADLQNDED 312
           D +  K+WY +  P  F   ++G T    +++T G ++          E +L DL  D  
Sbjct: 10  DKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRV----------ETTLYDLTGDFS 59

Query: 313 QAYRKIRLRAEDVQGMNVLTKLLGH 387
           Q Y  +  +    +G  ++T+ +GH
Sbjct: 60  QVYVHLYFKIIGNEGDRLITRFVGH 84
to top
>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 20/82 (24%), Positives = 37/82 (45%)
 Frame = +1

Query: 142 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 321
           + + +K WY ++AP    S+ V   L          S  + +RV EV +++L  +  ++ 
Sbjct: 12  EKWKEKVWYTVEAPPYLGSKEVSVALGE-------DSNSMVNRVVEVPISELTGNFKKSN 64

Query: 322 RKIRLRAEDVQGMNVLTKLLGH 387
            K   R  + +G    T  +GH
Sbjct: 65  EKALFRITNCEGTKCKTIFIGH 86
to top
>TAGC_BACSU (P27622) Putative major teichoic acid biosynthesis protein C|
          Length = 442

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = +1

Query: 154 KKQWYDIK--APLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLAD-LQNDEDQAYR 324
           KK+ +D     P LFT   V    V ++       +   H+++   +A  L  D  Q+YR
Sbjct: 3   KKELFDFTNITPKLFTELRVADKTVLQS----FNFDEKNHQIYTTQVASGLGKDNTQSYR 58

Query: 325 KIRLRAEDVQGMNVLTKLLGHG 390
             RL  E +Q  ++L K  GHG
Sbjct: 59  ITRLSLEGLQLDSMLLKHGGHG 80
to top
>LAT_HUMAN (O43561) Linker for activation of T-cells family member 1 (36 kDa|
           phospho-tyrosine adapter protein) (pp36) (p36-38)
          Length = 262

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 251 EAILVPCVLDTRVLPTLRLVKSSGALMSYHCFLVNGS 141
           EAILVPCVL   +LP L ++ +    +  HC  + GS
Sbjct: 3   EAILVPCVLGLLLLPILAMLMA----LCVHCHRLPGS 35
to top
>BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 precursor|
          Length = 1522

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 8/55 (14%)
 Frame = -1

Query: 172 CHTTASW*TDPRPSSCYPSS--------PWRCACSCRPPWSPLRGEWRRCGGWSG 32
           C  T S  T  R   C  ++        PW  +  C  P     G+W + G WSG
Sbjct: 412 CSVTCSNGTQQRSRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSG 466
to top
>BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 precursor|
          Length = 1522

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 8/55 (14%)
 Frame = -1

Query: 172 CHTTASW*TDPRPSSCYPSS--------PWRCACSCRPPWSPLRGEWRRCGGWSG 32
           C  T S  T  R   C  ++        PW  +  C  P     G+W + G WSG
Sbjct: 412 CSVTCSNGTQQRSRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSG 466
to top
>RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF|
          Length = 365

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = -1

Query: 355 LAHPQHGV*SSCRPGPHRSEDQLEILQTP----GASGPLR 248
           L  P+     SCR GPHR E  L++  TP    G+SG  R
Sbjct: 242 LQRPEEERLGSCRVGPHRDEVSLQLGGTPARRFGSSGQQR 281
to top
>ACDD_ARCFU (O29870) Acetyl-CoA decarbonylase/synthase complex delta subunit|
           (ACDS complex delta subunit) (Corrinoid/iron-sulfur
           component small subunit)
          Length = 452

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = -2

Query: 399 WVKSMPQKFCEDIHPLHILSTE---SDLPVGLVLIVLKIS*RYFKHPVLQAL*GNLGTLC 229
           W +   +KF  D+  LH++ST+    D P    + VL+   +  K P++    GN     
Sbjct: 197 WARKCVKKFGADLVTLHLISTDPLLDDTPASEAVKVLEDVLQAVKCPIIVGGSGNKEKDP 256

Query: 228 PGHEGLADVAAGE 190
              E  A+VA GE
Sbjct: 257 EVLEKAAEVAEGE 269
to top
>HEM0_BRARE (Q9YHT4) 5-aminolevulinate synthase, erythroid-specific,|
           mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic
           acid synthase) (Delta-aminolevulinate synthase)
           (Delta-ALA synthetase) (ALAS-E)
          Length = 583

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 200 RLVKSSGALMSYHCFLVNGSTAFFLLPFLP 111
           RL +  GAL+   CF+ N ST F L   LP
Sbjct: 240 RLHQKDGALVFSSCFVANDSTLFTLAKMLP 269
to top
>POL_BLVJ (P03361) Pol polyprotein [Contains: Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 852

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 164 HCFLVNGSTAFFLLPFLPLEMRL-FLPTAMVPAAGGVAALRRVEWRLEGRGFLGS 3
           H   ++   AFF +P   +E R  F  +  +P+ GG+   RR  WR+  +GF+ S
Sbjct: 83  HIICLDLKDAFFQIP---VEDRFRFYLSFTLPSPGGLQPHRRFAWRVLPQGFINS 134
to top
>VG78_ICHV1 (Q00167) Hypothetical gene 78 zinc-binding protein|
          Length = 400

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 253 LRQSWYPVSWTRGSCRRCG 197
           L   WYP S TRG+C  CG
Sbjct: 143 LGADWYPKSRTRGTCGYCG 161
to top
>ADA_ECOLI (P06134) Regulatory protein ada (Regulatory protein of adaptative|
           response) [Contains: Methylated-DNA--protein-cysteine
           methyltransferase (EC 2.1.1.63) (O-6-methylguanine-DNA
           alkyltransferase)]
          Length = 354

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 265 HRVFEVSLADLQNDEDQAYRKIRLRAEDVQGMNVLTKLLGHGF 393
           HR+F+ +         QA+R  RLR    +G +V T +L  GF
Sbjct: 117 HRLFKATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGF 159
to top
>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -1

Query: 136 PSSCYPSSPWRCACSCRPPWSPLRGEWRRCGGWSGG 29
           P  C P  P +C+  C PP S        CG  SGG
Sbjct: 29  PPKCPPKCPPQCSAPCPPPVSSC------CGSSSGG 58
to top
>ACM3_CHICK (P49578) Muscarinic acetylcholine receptor M3|
          Length = 639

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 11/57 (19%)
 Frame = -1

Query: 148 TDPRPSSCYPSSPWRCAC-----------SCRPPWSPLRGEWRRCGGWSGGLRVGAS 11
           T P P+SC+   PW   C           S  P +S +   W+R     G L  GAS
Sbjct: 18  TVPDPTSCFDVPPWTILCQRATMIMHNNSSALPLFSNVSSFWKRDSHGPGLLDEGAS 74
to top
>YL54_CAEEL (P34434) Hypothetical protein F44E2.4|
          Length = 1283

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 290  ARDTSNTRCFRPSEAILVPCVLDTRVLPTLRLVKSSGALMS 168
            A  T +    RP +A +VP     RV PTL  V SS  ++S
Sbjct: 971  AMSTPDICPIRPHQAPIVPINQPARVTPTLETVLSSSTMVS 1011
to top
>LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-binding protein 3|
            precursor (LTBP-3)
          Length = 1302

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 4/26 (15%)
 Frame = -1

Query: 136  PSSCYPSS----PWRCACSCRPPWSP 71
            P++C P      P    C CRPPW P
Sbjct: 1088 PAACRPGRCVNLPGSYRCECRPPWVP 1113
to top
>PAK4_HUMAN (O96013) Serine/threonine-protein kinase PAK 4 (EC 2.7.11.1)|
           (p21-activated kinase 4) (PAK-4)
          Length = 591

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 173 SRRRCSSPAATSARPSCPGHRVPRLPQR 256
           S  + + PA T A P+ PG   PR PQR
Sbjct: 267 SEPQLAPPACTPAAPAVPGPPGPRSPQR 294
to top
>CU20_TENMO (P26967) Adult-specific cuticular protein ACP-20 precursor|
          Length = 208

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 277 EVSLADLQNDEDQAYRKIRLRAEDVQGMNVLTKLLGHGFHP 399
           E SLA+     D   R ++  A+D  G N +   +GH  HP
Sbjct: 96  EYSLAE----PDGTVRVVKYTADDHNGFNAVVSRVGHAVHP 132
to top
>POL_BLVAU (P25059) Pol polyprotein [Contains: Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 852

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 164 HCFLVNGSTAFFLLPFLPLEMRLFLPTAMVPAAGGVAALRRVEWRLEGRGFLGS 3
           H   ++   AFF +P        F  T  +P  GG+   RR  WR+  +GF+ S
Sbjct: 83  HIICLDLKDAFFQIPVEDRFRSYFAFT--LPTPGGLQPHRRFAWRVLPQGFINS 134
to top
>SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sulfate|
           adenylate transferase) (SAT) (ATP-sulfurylase)
          Length = 437

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 12/57 (21%)
 Frame = -1

Query: 157 SW*TDPRPSSCYPSS-------PWRCACSCRPPWSPLRGEW-----RRCGGWSGGLR 23
           +W T   PS+  PSS       PWR   SCRP       E      RR G   G LR
Sbjct: 298 AWVTTTVPSTPRPSSMTKCQRAPWRSRSSCRPHGLLQEAEQDCDDARRAGSHQGRLR 354
to top
>ZYX_MOUSE (Q62523) Zyxin|
          Length = 564

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 148 TDPRPSSCYPSSPWRCACSCRPPWSPLR 65
           T P P    P  PW+   S +PP  P R
Sbjct: 188 TKPAPGGTAPLPPWKTPSSSQPPPQPQR 215
to top
>CO8A_HUMAN (P07357) Complement component C8 alpha chain precursor (Complement|
           component 8 alpha subunit)
          Length = 584

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 176 RRRCSSPAATSARPSCPGHRV 238
           RR C +PA  +   SCPG +V
Sbjct: 559 RRECDNPAPQNGGASCPGRKV 579
to top
>SYI_CORGL (Q8NNP0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1054

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 145 PFTKKQWYDIKAPLLFTSRNVGKT 216
           PF  K+W+D  AP  F    +G+T
Sbjct: 568 PFENKEWFDTHAPADFIVEYIGQT 591
to top
>LDLR_RABIT (P20063) Low-density lipoprotein receptor (LDL receptor) (Fragment)|
          Length = 837

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
 Frame = -1

Query: 160 ASW*TDPRPSSCYPSSPWRCACSCRPPWSPLRGEWRR----CGGWSGGLRVGASW 8
           A W  D  P     S  W   C  RP   P RG   R    CG    G  V ASW
Sbjct: 150 ALWACDGEPDCDDGSDEWPARCGARPSPQPGRGPCSRHEFHCG---SGECVHASW 201
to top
>LCE4A_HUMAN (Q5TA78) Late cornified envelope protein 4A (Late envelope protein|
           8) (Small proline-rich-like epidermal differentiation
           complex protein 4A)
          Length = 99

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -1

Query: 121 PSSPWRCACSCRPPWSPLRGEWRRCGGWSGG 29
           P  P +CA SC PP S        CG  SGG
Sbjct: 23  PKCPSKCASSCPPPISSC------CGSSSGG 47
to top
>METE_SULSO (Q980A9) Probable methylcobalamin:homocysteine methyltransferase|
           (EC 2.1.1.-) (Methionine synthase)
          Length = 332

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 154 KKQWYDIKAPLLFTSRNVG-KTLVSRTQGTKIASEGLKHRVFEV 282
           +K W +    L   SR +  + LVS  +GTK+  E LK + + V
Sbjct: 288 EKVWINPDCGLKLLSRKIAYQKLVSMVEGTKVVREELKRKGYSV 331
to top
>DDL_HAEIN (P44405) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 306

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = -3

Query: 251 EAILVPCVLDTRVLPTLRLVKSSGALMSYHCFLVNGSTAFFLLPFLPLEMRLFLPTAMVP 72
           + + VP VLD +VLP +R+V   G    Y    ++ +T +F    L  E    L T +  
Sbjct: 186 DELTVP-VLDNQVLPAIRIV-PEGEFYDYEAKYISDNTQYFCPAGLTPEREQALSTLVKR 243

Query: 71  A--AGGVAALRRVEWRLEGRG 15
           A  A G     R++   + +G
Sbjct: 244 AYDAVGCRGWSRIDVMCDAKG 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,470,388
Number of Sequences: 219361
Number of extensions: 1137156
Number of successful extensions: 3890
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 3696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3860
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top