ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart50g08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ581529.1|HVU581529 Hordeum vulgare xi gene for xylanase inhibitor Length = 1255 Score = 97.6 bits (49), Expect = 3e-17 Identities = 112/133 (84%) Strand = Plus / Plus Query: 232 ggcgtcgtgcaagcctctcccggtgctcgttccggtcaccaaggatcccgccaccctact 291 |||||||| |||| | || |||||||||| ||||||||||||||| |||||||| || Sbjct: 63 ggcgtcgtccaaggcccttccggtgctcgctccggtcaccaaggacgccgccacctccct 122 Query: 292 ctacaccaaccccttccattacggtaacgacctcgtcgtcgacaccgccggcccgctcgt 351 |||||| | ||||||||| |||| | |||||||| ||||| ||||||||||||||| Sbjct: 123 ctacacaatccccttccacgacggcgccaacctcgtcctcgacgtcgccggcccgctcgt 182 Query: 352 ctggtccacgtgc 364 ||||||||||||| Sbjct: 183 ctggtccacgtgc 195
>dbj|AB114628.1| Triticum aestivum Taxi-IV mRNA for xylanase inhibitor TAXI-IV, complete cds Length = 1387 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 199 cctcctcgtcctggccgtgtcgctggcgtggccggcgtcgtgcaagcctctcccggtgct 258 ||||||||||||||||| ||||| || || |||||||| ||| ||| |||||||| Sbjct: 66 cctcctcgtcctggccgcctcgctcgctgcgctggcgtcgtccaaaggtcttccggtgct 125 Query: 259 cgttccggtcaccaaggatcccgccaccctactctacaccaaccccttccattacggtaa 318 || ||||||||||||||| |||| ||| |||||||| | ||||||||| |||| Sbjct: 126 cgctccggtcaccaaggacaccgctacctccctctacacaatccccttccacgacggcgc 185 Query: 319 cgacctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 | |||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 186 caacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 231
>emb|AJ581532.1|SCE581532 Secale cereale xi-II/III gene for xylanase inhibitor Length = 1245 Score = 89.7 bits (45), Expect = 7e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 262 tccggtcaccaaggatcccgccaccctactctacaccaaccccttccattacggtaacga 321 ||||||||||||||| ||||||||| |||||||||| ||||||||| |||| | Sbjct: 86 tccggtcaccaaggaccccgccacctccctctacaccatccccttccacgacggcgccag 145 Query: 322 cctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgccagcccggtcacctgcc 381 ||||||| ||||| ||||||||||||||||||||||||| ||| || |||| || | ||| Sbjct: 146 cctcgtcctcgacgccgccggcccgctcgtctggtccacctgcgaggccggccagccgcc 205 Query: 382 ggcgg 386 ||||| Sbjct: 206 ggcgg 210
>emb|AJ697851.1| Triticum aestivum xi-IB gene for xylanase inhibitor precursor, exon 1 Length = 1206 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 251 ccggtgctcgttccggtcaccaaggatcccgccaccctactctacaccaaccccttccat 310 |||||||||| |||||||||||||| |||||||| |||||||||| ||||||||| Sbjct: 67 ccggtgctcgcgccggtcaccaaggacaccgccacctccctctacaccatccccttccac 126 Query: 311 tacggtaacgacctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||| | ||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 127 gacggcgccagcctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 180
>emb|AJ697850.1| Triticum aestivum partial xi-IIB gene for xylanase inhibitor precursor, exon 1 Length = 1170 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 251 ccggtgctcgttccggtcaccaaggatcccgccaccctactctacaccaaccccttccat 310 |||||||||| ||||||||||||||| |||| ||| |||||||| | ||||||||| Sbjct: 10 ccggtgctcgctccggtcaccaaggacaccgctacctccctctacacaatccccttccac 69 Query: 311 tacggtaacgacctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||| | |||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 70 gacggcgccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 123
>dbj|AB178471.1| Triticum aestivum Taxi-III gene for xylanase inhibitor, complete cds, upstream region Length = 2322 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 251 ccggtgctcgttccggtcaccaaggatcccgccaccctactctacaccaaccccttccat 310 |||||||||| |||||||||||||| |||||||| |||||||||| ||||||||| Sbjct: 1143 ccggtgctcgcgccggtcaccaaggacaccgccacctccctctacaccatccccttccac 1202 Query: 311 tacggtaacgacctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||| | ||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 1203 gacggcgccagcctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 1256
>dbj|AB114627.1| Triticum aestivum Taxi-III mRNA for xylanase inhibitor TAXI-III, complete cds Length = 1411 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 251 ccggtgctcgttccggtcaccaaggatcccgccaccctactctacaccaaccccttccat 310 |||||||||| |||||||||||||| |||||||| |||||||||| ||||||||| Sbjct: 146 ccggtgctcgcgccggtcaccaaggacaccgccacctccctctacaccatccccttccac 205 Query: 311 tacggtaacgacctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||| | ||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 206 gacggcgccagcctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 259
>dbj|AB114626.1| Triticum aestivum taxi-I mRNA for xylanase inhibitor TAXI-I, complete cds Length = 1374 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 251 ccggtgctcgttccggtcaccaaggatcccgccaccctactctacaccaaccccttccat 310 |||||||||| ||||||||||||||| ||||||||| |||||||| | ||||||||| Sbjct: 125 ccggtgctcgctccggtcaccaaggaccccgccacctccctctacacaatccccttccac 184 Query: 311 tacggtaacgacctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||| | ||||||| ||||| ||||||||| |||||||||||||||||| Sbjct: 185 gacggcgccagcctcgtcctcgacgtcgccggccctctcgtctggtccacgtgc 238
>emb|AJ438880.1|TAE438880 Triticum aestivum xiI gene for xylanase inhibitor Length = 1298 Score = 83.8 bits (42), Expect = 4e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 251 ccggtgctcgttccggtcaccaaggatcccgccaccctactctacaccaaccccttccat 310 |||||||||| ||||||||||||||| ||||||||| |||||||| | ||||||||| Sbjct: 117 ccggtgctcgctccggtcaccaaggaccccgccacctccctctacacaatccccttccac 176 Query: 311 tacggtaacgacctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||| | ||||||| ||||| ||||||||| |||||||||||||||||| Sbjct: 177 gacggcgccagcctcgtcctcgacgtcgccggccctctcgtctggtccacgtgc 230
>emb|AJ697849.1| Triticum aestivum partial xi-IIA gene for xylanase inhibitor precursor, exon 1 Length = 1170 Score = 67.9 bits (34), Expect = 2e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 251 ccggtgctcgttccggtcaccaaggatcccgccaccctactctacaccaaccccttccat 310 |||||||||| ||||||||||||||| | |||||| |||||||| | ||||||||| Sbjct: 10 ccggtgctcgctccggtcaccaaggacacggccacctccctctacacaatccccttccac 69 Query: 311 tacggtaacgacctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||| | ||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 70 gacggagccagcctcgtcctcgacgtcgccggcctgctcgtctggtccacgtgc 123
>gb|BT009260.1| Triticum aestivum clone wlk4.pk0017.d2:fis, full insert mRNA sequence Length = 1343 Score = 67.9 bits (34), Expect = 2e-08 Identities = 94/114 (82%) Strand = Plus / Minus Query: 251 ccggtgctcgttccggtcaccaaggatcccgccaccctactctacaccaaccccttccat 310 |||||||||| ||||||||||||||| | |||||| |||||||| | ||||||||| Sbjct: 1278 ccggtgctcgctccggtcaccaaggacacggccacctccctctacacaatccccttccac 1219 Query: 311 tacggtaacgacctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||| | ||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 1218 gacggagccagcctcgtcctcgacgtcgccggcctgctcgtctggtccacgtgc 1165
>ref|NM_190072.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 321 acctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 179 acctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgc 222
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 321 acctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 41135585 acctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgc 41135542 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 41162100 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgcc 41162142 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 41158840 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgcc 41158882 Score = 46.1 bits (23), Expect = 0.088 Identities = 38/43 (88%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| | ||||||||||| ||||||| Sbjct: 41168921 ctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgcc 41168963
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 321 acctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 32640 acctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgc 32597 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 59155 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgcc 59197 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 55895 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgcc 55937 Score = 46.1 bits (23), Expect = 0.088 Identities = 38/43 (88%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| | ||||||||||| ||||||| Sbjct: 65976 ctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgcc 66018
>dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B07, full insert sequence Length = 1404 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 321 acctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgc 364 |||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 191 acctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgc 234
>dbj|AK073591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M04, full insert sequence Length = 1520 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 204 ctcgtcctcgacctcgccggcccgctcgtctggtccacgtgcc 246
>ref|NM_190076.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 178 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgcc 220
>ref|NM_190075.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 175 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgcc 217
>dbj|AK108977.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-E08, full insert sequence Length = 1601 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 247 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgcc 289
>dbj|AK064091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-D09, full insert sequence Length = 1478 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| ||||||||||||| ||||||| Sbjct: 217 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgcc 259
>dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C06, full insert sequence Length = 1372 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgccagcccg 371 |||||||||||| |||||||||||| ||||||| ||||||| ||||| Sbjct: 198 ctcgtcgtcgacctcgccggcccgctgctctggtcgacgtgcccgcccg 246
>ref|NM_190078.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 46.1 bits (23), Expect = 0.088 Identities = 38/43 (88%) Strand = Plus / Plus Query: 323 ctcgtcgtcgacaccgccggcccgctcgtctggtccacgtgcc 365 |||||||||||| ||||||| | ||||||||||| ||||||| Sbjct: 172 ctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgcc 214
>emb|BX649388.7| Zebrafish DNA sequence from clone CH211-225P5 in linkage group 4, complete sequence Length = 177865 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 ctcctccccctcctcgtcctggccgt 216 ||||||||||||||| |||||||||| Sbjct: 134393 ctcctccccctcctcctcctggccgt 134418
>gb|AC147568.5| Mus musculus chromosome 7 clone RP23-15J23, complete sequence Length = 211115 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ctcgtcctggccgtgtcgctg 223 ||||||||||||||||||||| Sbjct: 165299 ctcgtcctggccgtgtcgctg 165319
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 ctcctccccctcctcgtcctggccg 215 ||||||| ||||||||||||||||| Sbjct: 5812964 ctcctcctcctcctcgtcctggccg 5812940
>gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complete sequence Length = 175515 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ctcgtcctggccgtgtcgctg 223 ||||||||||||||||||||| Sbjct: 53275 ctcgtcctggccgtgtcgctg 53295
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 ctcctccccctcctcgtcctggccg 215 ||||||| ||||||||||||||||| Sbjct: 41794 ctcctcctcctcctcgtcctggccg 41770
>dbj|AK138641.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330090D22 product:RIC3 homolog [Homo sapiens], full insert sequence Length = 1635 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ctcgtcctggccgtgtcgctg 223 ||||||||||||||||||||| Sbjct: 80 ctcgtcctggccgtgtcgctg 100
>dbj|AK134663.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330519K19 product:RIC3 homolog [Homo sapiens], full insert sequence Length = 2699 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ctcgtcctggccgtgtcgctg 223 ||||||||||||||||||||| Sbjct: 62 ctcgtcctggccgtgtcgctg 82
>dbj|AK149334.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930028D24 product:hypothetical protein, full insert sequence Length = 3259 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ctcgtcctggccgtgtcgctg 223 ||||||||||||||||||||| Sbjct: 69 ctcgtcctggccgtgtcgctg 89
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 ctcctccccctcctcgtcctggccg 215 ||||||| ||||||||||||||||| Sbjct: 18207 ctcctcctcctcctcgtcctggccg 18231
>dbj|AK038724.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230057E24 product:RIC3 isoform d homolog [Homo sapiens], full insert sequence Length = 684 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ctcgtcctggccgtgtcgctg 223 ||||||||||||||||||||| Sbjct: 80 ctcgtcctggccgtgtcgctg 100
>dbj|AK053760.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130307J04 product:hypothetical protein, full insert sequence Length = 1885 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ctcgtcctggccgtgtcgctg 223 ||||||||||||||||||||| Sbjct: 62 ctcgtcctggccgtgtcgctg 82
>dbj|AK082275.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230031J16 product:hypothetical protein, full insert sequence Length = 1901 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ctcgtcctggccgtgtcgctg 223 ||||||||||||||||||||| Sbjct: 62 ctcgtcctggccgtgtcgctg 82
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 ctcctccccctcctcgtcctggccg 215 ||||||| ||||||||||||||||| Sbjct: 5812177 ctcctcctcctcctcgtcctggccg 5812153
>dbj|AK121380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127G18, full insert sequence Length = 2169 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 ctcctccccctcctcgtcctggccg 215 ||||||| ||||||||||||||||| Sbjct: 125 ctcctcctcctcctcgtcctggccg 149
>dbj|AK059280.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C11, full insert sequence Length = 1285 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 ctcctccccctcctcgtcctggccg 215 ||||||| ||||||||||||||||| Sbjct: 149 ctcctcctcctcctcgtcctggccg 173
>ref|NM_178780.3| Mus musculus resistance to inhibitors of cholinesterase 3 homolog (C. elegans) (Ric3), transcript variant 2, mRNA Length = 1920 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ctcgtcctggccgtgtcgctg 223 ||||||||||||||||||||| Sbjct: 81 ctcgtcctggccgtgtcgctg 101
>ref|NM_001038624.1| Mus musculus resistance to inhibitors of cholinesterase 3 homolog (C. elegans) (Ric3), transcript variant 1, mRNA Length = 5303 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ctcgtcctggccgtgtcgctg 223 ||||||||||||||||||||| Sbjct: 81 ctcgtcctggccgtgtcgctg 101
>gb|AC110553.10| Mus musculus chromosome 3, clone RP23-248D8, complete sequence Length = 206620 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ctcctccccctcctcgtcct 210 |||||||||||||||||||| Sbjct: 29935 ctcctccccctcctcgtcct 29916
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ccggtcacctgccggcggag 388 |||||||||||||||||||| Sbjct: 664726 ccggtcacctgccggcggag 664745
>gb|BC058181.1| Mus musculus glutaminyl-peptide cyclotransferase-like, mRNA (cDNA clone MGC:67963 IMAGE:5325516), complete cds Length = 2045 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ctggtccacgtgccagcccg 371 |||||||||||||||||||| Sbjct: 1446 ctggtccacgtgccagcccg 1427
>gb|AC161434.2| Mus musculus chromosome 3, clone RP23-7K18, complete sequence Length = 195815 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ctcctccccctcctcgtcct 210 |||||||||||||||||||| Sbjct: 92470 ctcctccccctcctcgtcct 92451
>ref|XM_368871.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00373.4) partial mRNA Length = 2388 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 cggcggagttcccctgcacagcga 404 |||||| ||||||||||||||||| Sbjct: 252 cggcggcgttcccctgcacagcga 275
>gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, complete sequence Length = 170056 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctcctccccctcctcgtcct 210 |||||||||||||||||||| Sbjct: 116896 ctcctccccctcctcgtcct 116915
>ref|XM_978283.1| PREDICTED: Mus musculus ankyrin repeat domain 35 (Ankrd35), mRNA Length = 3844 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 agcacggctcctccccctcctcgtcctg 211 ||||| |||||||||||||||| ||||| Sbjct: 949 agcaccgctcctccccctcctcctcctg 922
>ref|XM_925722.2| PREDICTED: Mus musculus similar to ankyrin repeat domain 35, transcript variant 1 (LOC641285), mRNA Length = 4058 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 agcacggctcctccccctcctcgtcctg 211 ||||| |||||||||||||||| ||||| Sbjct: 1160 agcaccgctcctccccctcctcctcctg 1133
>ref|XM_289760.4| PREDICTED: Mus musculus ankyrin repeat domain 35, transcript variant 2 (Ankrd35), mRNA Length = 4057 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 agcacggctcctccccctcctcgtcctg 211 ||||| |||||||||||||||| ||||| Sbjct: 1160 agcaccgctcctccccctcctcctcctg 1133
>ref|XM_143418.5| PREDICTED: Mus musculus ankyrin repeat domain 35, transcript variant 1 (Ankrd35), mRNA Length = 4054 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 agcacggctcctccccctcctcgtcctg 211 ||||| |||||||||||||||| ||||| Sbjct: 1160 agcaccgctcctccccctcctcctcctg 1133
>gb|AC145199.3| Mus musculus BAC clone RP23-173N12 from chromosome 7, complete sequence Length = 220892 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ctggtccacgtgccagcccg 371 |||||||||||||||||||| Sbjct: 68968 ctggtccacgtgccagcccg 68949
>gb|AC112261.4| Mus musculus BAC clone RP23-204O17 from 3, complete sequence Length = 186290 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 184 agcacggctcctccccctcctcgtcctg 211 ||||| |||||||||||||||| ||||| Sbjct: 97313 agcaccgctcctccccctcctcctcctg 97340
>emb|AL445438.27| Human DNA sequence from clone RP11-427B20 on chromosome 1 Contains two CpG islands, complete sequence Length = 108271 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ctcctccccctcctcgtcct 210 |||||||||||||||||||| Sbjct: 52295 ctcctccccctcctcgtcct 52276
>ref|XM_503948.1| Yarrowia lipolytica CLIB122, YALI0E14619g predicted mRNA Length = 432 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ctggtccacgtgccagcccg 371 |||||||||||||||||||| Sbjct: 51 ctggtccacgtgccagcccg 32
>emb|AL807374.1|NCB13H18 Neurospora crassa DNA linkage group V BAC contig B13H18 Length = 122576 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 gcagcacggctcctccccctcctc 205 |||||||| ||||||||||||||| Sbjct: 97219 gcagcacgcctcctccccctcctc 97242
>gb|AC154492.2| Mus musculus BAC clone RP24-107B10 from chromosome 17, complete sequence Length = 172605 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ctcctccccctcctcgtcct 210 |||||||||||||||||||| Sbjct: 16258 ctcctccccctcctcgtcct 16239
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tcctggccgtgtcgctggcg 226 |||||||||||||||||||| Sbjct: 2133041 tcctggccgtgtcgctggcg 2133060
>gb|AF449447.1| Mus musculus C3H chromosome 3 hyplip1 region Length = 176641 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 agcacggctcctccccctcctcgtcctg 211 ||||| |||||||||||||||| ||||| Sbjct: 157488 agcaccgctcctccccctcctcctcctg 157461
>dbj|AK136746.1| Mus musculus adult male epididymis cDNA, RIKEN full-length enriched library, clone:9230114M18 product:hypothetical protein, full insert sequence Length = 1757 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ctggtccacgtgccagcccg 371 |||||||||||||||||||| Sbjct: 565 ctggtccacgtgccagcccg 546
>ref|NM_026111.2| Mus musculus glutaminyl-peptide cyclotransferase-like (Qpctl), mRNA Length = 2100 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ctggtccacgtgccagcccg 371 |||||||||||||||||||| Sbjct: 1423 ctggtccacgtgccagcccg 1404
>gb|AC010594.7| Homo sapiens chromosome 5 clone CTC-478B9, complete sequence Length = 78389 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 27 cagcctccagtagtatataaacaagggcgcac 58 ||||||||| |||||||||||| || |||||| Sbjct: 822 cagcctccattagtatataaaccagagcgcac 791
>dbj|AK046624.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430210J15 product:CDNA FLJ25124 FIS, CLONE CBR06414 homolog [Homo sapiens], full insert sequence Length = 3297 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 agcacggctcctccccctcctcgtcctg 211 ||||| |||||||||||||||| ||||| Sbjct: 969 agcaccgctcctccccctcctcctcctg 942
>dbj|AK039772.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330105P18 product:hypothetical Ankyrin repeat profile/Ankyrin-repeat/Ankyrin repeat region circular profile/Yeast DNA-binding domain containing protein, full insert sequence Length = 1760 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 agcacggctcctccccctcctcgtcctg 211 ||||| |||||||||||||||| ||||| Sbjct: 915 agcaccgctcctccccctcctcctcctg 888
>dbj|AK035587.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530071O17 product:weakly similar to GLUTAMINYL CYCLASE (FRAGMENT) [Canis familiaris], full insert sequence Length = 2100 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ctggtccacgtgccagcccg 371 |||||||||||||||||||| Sbjct: 1423 ctggtccacgtgccagcccg 1404
>dbj|AK045687.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230304H04 product:weakly similar to GLUTAMINYL CYCLASE (FRAGMENT) [Canis familiaris], full insert sequence Length = 2009 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ctggtccacgtgccagcccg 371 |||||||||||||||||||| Sbjct: 1427 ctggtccacgtgccagcccg 1408
>dbj|AK028691.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732436F15 product:CDNA FLJ25124 FIS, CLONE CBR06414 homolog [Homo sapiens], full insert sequence Length = 3277 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 agcacggctcctccccctcctcgtcctg 211 ||||| |||||||||||||||| ||||| Sbjct: 950 agcaccgctcctccccctcctcctcctg 923
>dbj|AK007701.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810036A13 product:weakly similar to GLUTAMINYL CYCLASE (FRAGMENT) [Canis familiaris], full insert sequence Length = 1481 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ctggtccacgtgccagcccg 371 |||||||||||||||||||| Sbjct: 1451 ctggtccacgtgccagcccg 1432
>dbj|AK007555.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810019P04 product:weakly similar to GLUTAMINYL CYCLASE (FRAGMENT) [Canis familiaris], full insert sequence Length = 1498 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ctggtccacgtgccagcccg 371 |||||||||||||||||||| Sbjct: 1468 ctggtccacgtgccagcccg 1449
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cctcgtcgtcgacaccgccg 341 |||||||||||||||||||| Sbjct: 23046285 cctcgtcgtcgacaccgccg 23046266 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cctcgtcgtcgacaccgccg 341 |||||||||||||||||||| Sbjct: 23037348 cctcgtcgtcgacaccgccg 23037329
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cctcgtcgtcgacaccgccg 341 |||||||||||||||||||| Sbjct: 27249825 cctcgtcgtcgacaccgccg 27249844
>gb|AC008824.6|AC008824 Homo sapiens chromosome 5 clone CTD-2132K6, complete sequence Length = 121178 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 27 cagcctccagtagtatataaacaagggcgcac 58 ||||||||| |||||||||||| || |||||| Sbjct: 85831 cagcctccattagtatataaaccagagcgcac 85862
>gb|AC110275.13| Homo sapiens chromosome 8, clone RP11-122A17, complete sequence Length = 169699 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tgaacagttcatcaccacac 118 |||||||||||||||||||| Sbjct: 138558 tgaacagttcatcaccacac 138539
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cctcgtcgtcgacaccgccg 341 |||||||||||||||||||| Sbjct: 146274 cctcgtcgtcgacaccgccg 146293
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cctcgtcgtcgacaccgccg 341 |||||||||||||||||||| Sbjct: 112829 cctcgtcgtcgacaccgccg 112810 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cctcgtcgtcgacaccgccg 341 |||||||||||||||||||| Sbjct: 103892 cctcgtcgtcgacaccgccg 103873
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cctcgtcgtcgacaccgccg 341 |||||||||||||||||||| Sbjct: 100496 cctcgtcgtcgacaccgccg 100515
>emb|AL833793.10| Mouse DNA sequence from clone RP23-366F22 on chromosome 2, complete sequence Length = 124256 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctcctccccctcctcgtcct 210 |||||||||||||||||||| Sbjct: 82734 ctcctccccctcctcgtcct 82753
>gb|AY107978.1| Zea mays PCO148741 mRNA sequence Length = 1180 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgacagaatgccacgctcca 82 |||||||||||||||||||| Sbjct: 339 cgacagaatgccacgctcca 320
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ctcctccccctcctcgtcct 210 |||||||||||||||||||| Sbjct: 73565 ctcctccccctcctcgtcct 73546
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ctggtccacgtgccagcccg 371 |||||||||||||||||||| Sbjct: 1745660 ctggtccacgtgccagcccg 1745641
>gb|AC058786.24| Mus musculus strain C57BL/6J chromosome 4 clone rp23-117o7, complete sequence Length = 209737 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctcctccccctcctcgtcct 210 |||||||||||||||||||| Sbjct: 45071 ctcctccccctcctcgtcct 45090
>emb|AL732476.12| Mouse DNA sequence from clone RP23-131A6 on chromosome 4, complete sequence Length = 194554 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ctcctccccctcctcgtcct 210 |||||||||||||||||||| Sbjct: 61031 ctcctccccctcctcgtcct 61012 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,728,052 Number of Sequences: 3902068 Number of extensions: 3728052 Number of successful extensions: 67549 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67167 Number of HSP's gapped (non-prelim): 378 length of query: 405 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 383 effective length of database: 17,147,199,772 effective search space: 6567377512676 effective search space used: 6567377512676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
