ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart50d07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 103 bits (52), Expect = 5e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 256 ctcctcgacctcccacatccccgtccgctccctcttcaccgggatagtcgaggaggtcgg 315 ||||||| | || ||| ||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 21671156 ctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcgg 21671215 Query: 316 ccgcgtacgccgcatcggcccgccgcccacgccccctgggggcgggggagacgcggctcc 375 | ||| ||||||||||||||||||||| |||| || ||||| || | || ||| || Sbjct: 21671216 caccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccc 21671275 Query: 376 cggtgttgacctcgaggtcgagac 399 ||| |||||||||||||| ||||| Sbjct: 21671276 cggcgttgacctcgaggtggagac 21671299
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 103 bits (52), Expect = 5e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 256 ctcctcgacctcccacatccccgtccgctccctcttcaccgggatagtcgaggaggtcgg 315 ||||||| | || ||| ||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 21599501 ctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcgg 21599560 Query: 316 ccgcgtacgccgcatcggcccgccgcccacgccccctgggggcgggggagacgcggctcc 375 | ||| ||||||||||||||||||||| |||| || ||||| || | || ||| || Sbjct: 21599561 caccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccc 21599620 Query: 376 cggtgttgacctcgaggtcgagac 399 ||| |||||||||||||| ||||| Sbjct: 21599621 cggcgttgacctcgaggtggagac 21599644
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 103 bits (52), Expect = 5e-19 Identities = 121/144 (84%) Strand = Plus / Minus Query: 256 ctcctcgacctcccacatccccgtccgctccctcttcaccgggatagtcgaggaggtcgg 315 ||||||| | || ||| ||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 141395 ctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcgg 141336 Query: 316 ccgcgtacgccgcatcggcccgccgcccacgccccctgggggcgggggagacgcggctcc 375 | ||| ||||||||||||||||||||| |||| || ||||| || | || ||| || Sbjct: 141335 caccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccc 141276 Query: 376 cggtgttgacctcgaggtcgagac 399 ||| |||||||||||||| ||||| Sbjct: 141275 cggcgttgacctcgaggtggagac 141252
>emb|AL645479.19| Mouse DNA sequence from clone RP23-396O3 on chromosome 11 Contains the Cpd gene for carboxypeptidase D and a CpG island, complete sequence Length = 102358 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 69 tggggccgccgcccaccgccgccgcgg 95 ||||||||||||||||||||||||||| Sbjct: 74961 tggggccgccgcccaccgccgccgcgg 74935
>dbj|AK142583.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630049G17 product:carboxypeptidase D, full insert sequence Length = 2173 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 69 tggggccgccgcccaccgccgccgcgg 95 ||||||||||||||||||||||||||| Sbjct: 335 tggggccgccgcccaccgccgccgcgg 361
>dbj|AK137737.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930125P19 product:carboxypeptidase D, full insert sequence Length = 4350 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 69 tggggccgccgcccaccgccgccgcgg 95 ||||||||||||||||||||||||||| Sbjct: 344 tggggccgccgcccaccgccgccgcgg 370
>ref|NM_007754.1| Mus musculus carboxypeptidase D (Cpd), mRNA Length = 4359 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 69 tggggccgccgcccaccgccgccgcgg 95 ||||||||||||||||||||||||||| Sbjct: 353 tggggccgccgcccaccgccgccgcgg 379
>dbj|D85391.1| Mus musculus mRNA for gp180-carboxypeptidase D-like enzyme, complete cds Length = 4359 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 69 tggggccgccgcccaccgccgccgcgg 95 ||||||||||||||||||||||||||| Sbjct: 353 tggggccgccgcccaccgccgccgcgg 379
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgcggc 96 |||||||||||||||||||||||| Sbjct: 12601900 gccgccgcccaccgccgccgcggc 12601877 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 74 ccgccgcccaccgccgccgcggcc 97 |||||||||||||||||||||||| Sbjct: 3229603 ccgccgcccaccgccgccgcggcc 3229580 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 ggccgccgcccaccgccgccgcggc 96 ||||||||||| ||||||||||||| Sbjct: 7860736 ggccgccgccctccgccgccgcggc 7860760 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgcggc 96 |||||||||| ||||||||||||| Sbjct: 34488297 gccgccgcccgccgccgccgcggc 34488274 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ccaccgccgccgcggccgtggcat 104 ||||||||||||| |||||||||| Sbjct: 21262314 ccaccgccgccgccgccgtggcat 21262291
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgcggc 96 |||||||||||||||||||||||| Sbjct: 75089 gccgccgcccaccgccgccgcggc 75112
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgcggc 96 |||||||||||||||||||||||| Sbjct: 12598663 gccgccgcccaccgccgccgcggc 12598640 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 74 ccgccgcccaccgccgccgcggcc 97 |||||||||||||||||||||||| Sbjct: 3229714 ccgccgcccaccgccgccgcggcc 3229691 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 ggccgccgcccaccgccgccgcggc 96 ||||||||||| ||||||||||||| Sbjct: 7858571 ggccgccgccctccgccgccgcggc 7858595 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgcggc 96 |||||||||| ||||||||||||| Sbjct: 34578369 gccgccgcccgccgccgccgcggc 34578346 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ccaccgccgccgcggccgtggcat 104 ||||||||||||| |||||||||| Sbjct: 21255343 ccaccgccgccgccgccgtggcat 21255320
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 74 ccgccgcccaccgccgccgcggcc 97 |||||||||||||||||||||||| Sbjct: 54476 ccgccgcccaccgccgccgcggcc 54453
>dbj|AK073084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022N12, full insert sequence Length = 1943 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 ccgccgcccaccgccgccgcggc 96 ||||||||||||||||||||||| Sbjct: 83 ccgccgcccaccgccgccgcggc 61
>emb|X68444.1|RCNIF R.capsulatus genes nifU, nifS, nifV, nifW and orf6 Length = 3570 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgcggccg 98 |||||||||| ||||||||||||||| Sbjct: 516 gccgccgcccgccgccgccgcggccg 541
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 70 ggggccgccgcccaccgccgcc 91 |||||||||||||||||||||| Sbjct: 48799 ggggccgccgcccaccgccgcc 48820
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgcggccg 98 ||||||||||||||||||||| |||| Sbjct: 18741353 gccgccgcccaccgccgccgccgccg 18741378 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ccgccgcccaccgccgccgcggcc 97 ||||||||| |||||||||||||| Sbjct: 19232804 ccgccgcccgccgccgccgcggcc 19232781 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcggccg 98 ||||||||||||||||| |||||| Sbjct: 11352038 cgccgcccaccgccgccacggccg 11352061
>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0071O21 Length = 158410 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgcggccg 98 ||||||||||||||||||||| |||| Sbjct: 83995 gccgccgcccaccgccgccgccgccg 84020
>ref|XM_474642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 870 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 222 gccgccgcccaccgccgccgc 202
>ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 486 gccgccgcccaccgccgccgc 466
>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04, complete sequence Length = 168424 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 240 ccaagagcatctcctcctcctcgacctcc 268 |||||||| ||||||||||||| |||||| Sbjct: 111362 ccaagagcttctcctcctcctccacctcc 111390
>ref|XM_601920.2| PREDICTED: Bos taurus similar to Immediate early response gene 5 protein (LOC523618), mRNA Length = 2632 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 ggggccgccgcccaccgccgccgcg 94 |||||||||||||||| |||||||| Sbjct: 1356 ggggccgccgcccacccccgccgcg 1332
>ref|XM_587052.2| PREDICTED: Bos taurus similar to leiomodin 3 (fetal) (LOC509978), mRNA Length = 2012 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ctcctcctcctcgacctccca 270 ||||||||||||||||||||| Sbjct: 1367 ctcctcctcctcgacctccca 1387
>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence Length = 209383 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 tccccaagagcatctcctcctcctc 261 ||||||||| ||||||||||||||| Sbjct: 54815 tccccaagatcatctcctcctcctc 54791
>gb|AC096781.6| Oryza sativa chromosome 10 BAC OSJNBa0013H08 genomic sequence, complete sequence Length = 58293 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 42807 gccgccgcccaccgccgccgc 42827
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 135290 gccgccgcccaccgccgccgc 135310 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 103596 gccgccgcccaccgccgccgc 103576
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 8906 gccgccgcccaccgccgccgc 8926
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 5159017 gccgccgcccaccgccgccgc 5159037 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 5127323 gccgccgcccaccgccgccgc 5127303
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 16349177 gccgccgcccaccgccgccgc 16349157
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 13129505 gccgccgcccaccgccgccgc 13129525 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cgccgcccaccgccgccgcggccg 98 ||||||||||||||||||| |||| Sbjct: 19908911 cgccgcccaccgccgccgccgccg 19908888
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 240 ccaagagcatctcctcctcctcgacctcc 268 |||||||| ||||||||||||| |||||| Sbjct: 15456341 ccaagagcttctcctcctcctccacctcc 15456369 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcggccg 98 |||||||| ||||||||||||||| Sbjct: 24100247 cgccgccctccgccgccgcggccg 24100270
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ggccgccgcccaccgccgccg 92 ||||||||||||||||||||| Sbjct: 36383611 ggccgccgcccaccgccgccg 36383591 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccaagagcatctcctcctcc 259 |||||||||||||||||||| Sbjct: 35426878 ccaagagcatctcctcctcc 35426897
>gb|AF286216.2| Pseudomonas syringae pv. syringae syringopeptin synthetase (sypA), syringopeptin synthetase B (sypB), and syringopeptin synthetase C (sypC) genes, complete cds Length = 73800 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 6584 gccgccgcccaccgccgccgc 6564
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 ggccgccgcccaccgccgccgcggc 96 ||||||||||| ||||||||||||| Sbjct: 46334 ggccgccgccctccgccgccgcggc 46358
>ref|NM_012836.1| Rattus norvegicus carboxypeptidase D (Cpd), mRNA Length = 4377 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 tggggccgccgcccaccgccgccgc 93 ||||||||||||||||| ||||||| Sbjct: 368 tggggccgccgcccacccccgccgc 392
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ggccgccgcccaccgccgccg 92 ||||||||||||||||||||| Sbjct: 133488 ggccgccgcccaccgccgccg 133468
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ggccgccgcccaccgccgccg 92 ||||||||||||||||||||| Sbjct: 35450 ggccgccgcccaccgccgccg 35430
>dbj|AP005168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066B06 Length = 154025 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 47832 gccgccgcccaccgccgccgc 47852
>dbj|AK121154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O05, full insert sequence Length = 1956 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 ggccgccgcccaccgccgccgcggc 96 ||||||||||| ||||||||||||| Sbjct: 465 ggccgccgccctccgccgccgcggc 489
>dbj|AK101755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063K15, full insert sequence Length = 2176 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 ggccgccgcccaccgccgccg 92 ||||||||||||||||||||| Sbjct: 60 ggccgccgcccaccgccgccg 80
>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full insert sequence Length = 1308 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 512 gccgccgcccaccgccgccgc 492
>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full insert sequence Length = 1365 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 499 gccgccgcccaccgccgccgc 479
>gb|AC109199.10| Mus musculus chromosome 1, clone RP23-29D20, complete sequence Length = 194339 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 tcccatatcctccccaatcca 49 ||||||||||||||||||||| Sbjct: 179924 tcccatatcctccccaatcca 179944
>gb|DQ333338.1| Oryza sativa (japonica cultivar-group) UDP-glucuronic acid 4-epimerase isoform 1 mRNA, complete cds Length = 1455 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 ggccgccgcccaccgccgccgcggc 96 ||||||||||| ||||||||||||| Sbjct: 402 ggccgccgccctccgccgccgcggc 426
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgc 93 ||||||||||||||||||||| Sbjct: 16357430 gccgccgcccaccgccgccgc 16357410
>gb|AC140217.3| Mus musculus BAC clone RP23-279O5 from 8, complete sequence Length = 224205 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 tccccaagagcatctcctcctcctc 261 ||||||||| ||||||||||||||| Sbjct: 149755 tccccaagatcatctcctcctcctc 149731
>gb|U62897.1|RNU62897 Rattus norvegicus carboxypeptidase D precursor (Cpd) mRNA, complete cds Length = 4377 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 tggggccgccgcccaccgccgccgc 93 ||||||||||||||||| ||||||| Sbjct: 368 tggggccgccgcccacccccgccgc 392
>gb|BC108253.1| Homo sapiens immediate early response 5, mRNA (cDNA clone MGC:102760 IMAGE:6025403), complete cds Length = 2171 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 870 gggccgccgcccacccccgccgcg 847
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cttcgcctcccgggtggcca 188 |||||||||||||||||||| Sbjct: 211229 cttcgcctcccgggtggcca 211248
>ref|NM_185115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1407 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgcggc 96 |||||||||| ||||||||||||| Sbjct: 84 gccgccgcccgccgccgccgcggc 61
>ref|XM_465082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1020 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcggccg 98 ||||||||||||||||| |||||| Sbjct: 971 cgccgcccaccgccgccacggccg 994
>ref|NM_001003155.1| Canis familiaris parathyroid hormone receptor 1 (PTHR1), mRNA Length = 2177 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ccgccgcccaccgccgccgc 93 |||||||||||||||||||| Sbjct: 1070 ccgccgcccaccgccgccgc 1089
>ref|XM_463058.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1041 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ccaccgccgccgcggccgtggcat 104 ||||||||||||| |||||||||| Sbjct: 896 ccaccgccgccgccgccgtggcat 873
>ref|NM_187407.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1455 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cgccgcccaccgccgccgcggccg 98 ||||||||||||||||||| |||| Sbjct: 371 cgccgcccaccgccgccgccgccg 348
>ref|NM_016545.3| Homo sapiens immediate early response 5 (IER5), mRNA Length = 2369 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 1084 gggccgccgcccacccccgccgcg 1061
>gb|BT018804.1| Zea mays clone EL01N0529F07.d mRNA sequence Length = 1313 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 accgccgccgcggccgtggc 102 |||||||||||||||||||| Sbjct: 56 accgccgccgcggccgtggc 75
>gb|AY186678.1| Cancer magister clone Cma50 microsatellite sequence Length = 302 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ctcctcctcctcgacctccc 269 |||||||||||||||||||| Sbjct: 265 ctcctcctcctcgacctccc 246
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ggccgccgcccaccgccgcc 91 |||||||||||||||||||| Sbjct: 1892408 ggccgccgcccaccgccgcc 1892427
>gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, complete sequence Length = 193192 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ctcctcctcctcgacctccc 269 |||||||||||||||||||| Sbjct: 128327 ctcctcctcctcgacctccc 128308
>ref|XM_323855.1| Neurospora crassa OR74A hypothetical protein (NCU04503.1) partial mRNA Length = 1449 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 atctcctcctcctcgacctcccac 271 ||||||||||||||| |||||||| Sbjct: 1400 atctcctcctcctcgtcctcccac 1377
>ref|XM_427117.1| PREDICTED: Gallus gallus similar to putative microtubule associated protein; cNau (LOC429560), mRNA Length = 933 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 gggcgggggagacgcggctcccgg 378 ||||||||| |||||||||||||| Sbjct: 192 gggcgggggggacgcggctcccgg 215
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcggccg 98 |||||||| ||||||||||||||| Sbjct: 168736 cgccgccctccgccgccgcggccg 168759
>ref|XM_951821.1| Neurospora crassa OR74A hypothetical protein (NCU04503.1) partial mRNA Length = 1449 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 atctcctcctcctcgacctcccac 271 ||||||||||||||| |||||||| Sbjct: 1400 atctcctcctcctcgtcctcccac 1377
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcg 94 |||||||||||||||||||| Sbjct: 120928 cgccgcccaccgccgccgcg 120947
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ccaccgccgccgcggccgtggcat 104 ||||||||||||| |||||||||| Sbjct: 118229 ccaccgccgccgccgccgtggcat 118206
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 62 ctcgccatggggccgccgcccaccgccgccgc 93 |||||||||| | |||||| |||||||||||| Sbjct: 63358 ctcgccatggcggcgccgctcaccgccgccgc 63327
>gb|BC000128.2| Homo sapiens immediate early response 5, mRNA (cDNA clone MGC:5355 IMAGE:3048356), complete cds Length = 2159 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 874 gggccgccgcccacccccgccgcg 851
>emb|AL356267.27| Human DNA sequence from clone RP11-309G3 on chromosome 1 Contains the 5' end of the STX6 gene for syntaxin 6, the MR1 gene for major histocompatibility complex class I-related, the IER5 gene for immediate early response 5, the 5' end of a novel gene (LOC284646) and two CpG islands, complete sequence Length = 181808 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 92785 gggccgccgcccacccccgccgcg 92762
>gb|AF424647.1| Phytophthora infestans clone MY-05-B-09 argininosuccinate lyase mRNA, complete cds Length = 1522 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccagccgctgcgcttctcgc 227 |||||||||||||||||||| Sbjct: 523 ccagccgctgcgcttctcgc 542
>emb|BX013808.1|CNS08ITG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA20DA10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 708 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 catctcctcctcctcgacct 266 |||||||||||||||||||| Sbjct: 292 catctcctcctcctcgacct 311
>emb|BX013807.1|CNS08ITF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA20DA10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 872 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 catctcctcctcctcgacct 266 |||||||||||||||||||| Sbjct: 621 catctcctcctcctcgacct 602
>gb|AY920595.1| Uncultured bacterium clone LW-BF-fhcD2 formyltransferase/hydrolase complex subunit D (fhcD) gene, partial cds Length = 836 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccg 92 |||||||||||||||||||| Sbjct: 465 gccgccgcccaccgccgccg 446
>gb|AY920584.1| Xanthobacter sp. JLW14 formyltransferase/hydrolase complex subunit D (fhcD) gene, partial cds Length = 671 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccg 92 |||||||||||||||||||| Sbjct: 422 gccgccgcccaccgccgccg 403
>emb|CR622335.1| full-length cDNA clone CS0DI009YH12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2094 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 877 gggccgccgcccacccccgccgcg 854
>emb|CR618453.1| full-length cDNA clone CS0DL005YF19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2064 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 841 gggccgccgcccacccccgccgcg 818
>emb|CR611489.1| full-length cDNA clone CS0DI074YP08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1765 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 542 gggccgccgcccacccccgccgcg 519
>emb|CR591624.1| full-length cDNA clone CS0DI055YI01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1955 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 715 gggccgccgcccacccccgccgcg 692
>gb|AE012209.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 117 of 460 of the complete genome Length = 12098 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cgccgcccaccgccgccgcg 94 |||||||||||||||||||| Sbjct: 2219 cgccgcccaccgccgccgcg 2200
>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence, complete sequence Length = 117505 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 gccgccgcccaccgccgccgcggc 96 |||||||||| ||||||||||||| Sbjct: 37870 gccgccgcccgccgccgccgcggc 37893
>gb|AF258581.1|AF258581 Homo sapiens PP4583 mRNA, complete cds Length = 2142 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 872 gggccgccgcccacccccgccgcg 849
>ref|XM_689818.1| PREDICTED: Danio rerio similar to CG8176-PB, isoform B (LOC566542), mRNA Length = 2967 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 ctcctcctcctcgacctcccacat 273 |||||||||||| ||||||||||| Sbjct: 1682 ctcctcctcctccacctcccacat 1705
>dbj|AK013718.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900057G03 product:retinoid X receptor beta, full insert sequence Length = 939 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 ggccgccgcccaccgccgccgcgg 95 ||||||||||| |||||||||||| Sbjct: 339 ggccgccgcccgccgccgccgcgg 316
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcg 94 |||||||||||||||||||| Sbjct: 3761088 cgccgcccaccgccgccgcg 3761107
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcg 94 |||||||||||||||||||| Sbjct: 23530242 cgccgcccaccgccgccgcg 23530261 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 62 ctcgccatggggccgccgcccaccgccgccgc 93 |||||||||| | |||||| |||||||||||| Sbjct: 21711305 ctcgccatggcggcgccgctcaccgccgccgc 21711274
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ccaccgccgccgcggccgtg 100 |||||||||||||||||||| Sbjct: 10107546 ccaccgccgccgcggccgtg 10107565
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgcccaccgccgccgcggcc 97 ||||||||| |||||||||||||| Sbjct: 30423485 ccgccgcccgccgccgccgcggcc 30423508
>gb|AC093838.3| Homo sapiens BAC clone RP11-433A19 from 2, complete sequence Length = 178029 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 gcccacgccccctgggggcg 359 |||||||||||||||||||| Sbjct: 70499 gcccacgccccctgggggcg 70480
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 ggccgccgcccaccgccgccgcgg 95 ||||| |||||||||||||||||| Sbjct: 7632450 ggccggcgcccaccgccgccgcgg 7632473
>ref|NM_204919.1| Gallus gallus putative microtubule associated protein (NAU), mRNA Length = 5069 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 gggcgggggagacgcggctcccgg 378 ||||||||| |||||||||||||| Sbjct: 290 gggcgggggggacgcggctcccgg 313
>gb|AC131235.4| Homo sapiens 3 BAC RP11-778D9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174521 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcggccg 98 |||||||| ||||||||||||||| Sbjct: 56334 cgccgcccgccgccgccgcggccg 56357
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 ggggccgccgcccaccgccgccgc 93 |||||||||| ||||||||||||| Sbjct: 2719183 ggggccgccgtccaccgccgccgc 2719160 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cgccgcccaccgccgccgcggccg 98 ||||||||| |||||||||||||| Sbjct: 675753 cgccgcccagcgccgccgcggccg 675730
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccaagagcatctcctcctcc 259 |||||||||||||||||||| Sbjct: 50827 ccaagagcatctcctcctcc 50846
>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0466E03 Length = 138343 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ccaccgccgccgcggccgtg 100 |||||||||||||||||||| Sbjct: 136850 ccaccgccgccgcggccgtg 136869
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ccgccgcccaccgccgccgcggcc 97 ||||||||| |||||||||||||| Sbjct: 60846 ccgccgcccgccgccgccgcggcc 60869
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cgccgcccaccgccgccgcggccg 98 ||||||||||||||||||| |||| Sbjct: 73561 cgccgcccaccgccgccgccgccg 73538
>dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1253_E02 Length = 166645 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ccaccgccgccgcggccgtg 100 |||||||||||||||||||| Sbjct: 67224 ccaccgccgccgcggccgtg 67243
>emb|BX005396.5| Zebrafish DNA sequence from clone CH211-128N12, complete sequence Length = 177531 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gtccagccgctgcgcttctc 225 |||||||||||||||||||| Sbjct: 67125 gtccagccgctgcgcttctc 67106
>emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in linkage group 6, complete sequence Length = 143341 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 ctcctcctcctcgacctcccacat 273 |||||||||||| ||||||||||| Sbjct: 36211 ctcctcctcctccacctcccacat 36234
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ccgccgcccaccgccgccgcggcc 97 ||||||||| |||||||||||||| Sbjct: 602 ccgccgcccgccgccgccgcggcc 579
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0415B12 Length = 157419 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ccgccgcccaccgccgccgcggcc 97 ||||||||| |||||||||||||| Sbjct: 131053 ccgccgcccgccgccgccgcggcc 131030
>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073G17 Length = 162391 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcggccg 98 ||||||||||||||||| |||||| Sbjct: 154853 cgccgcccaccgccgccacggccg 154876
>dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1654_A02 Length = 128520 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcggccg 98 ||||||||||||||||| |||||| Sbjct: 21510 cgccgcccaccgccgccacggccg 21533
>gb|AF178984.1|AF178984 Homo sapiens hypothetical protein SBBI48 mRNA, complete cds Length = 2091 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 825 gggccgccgcccacccccgccgcg 802
>gb|AC123915.12| Mus musculus chromosome 1, clone RP23-108H22, complete sequence Length = 177375 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ccccatcccatatcctcccc 43 |||||||||||||||||||| Sbjct: 75508 ccccatcccatatcctcccc 75527
>ref|XM_562819.1| Anopheles gambiae str. PEST ENSANGP00000026097 (ENSANGG00000022829), partial mRNA Length = 543 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 catctcctcctcctcgacct 266 |||||||||||||||||||| Sbjct: 243 catctcctcctcctcgacct 224
>ref|XM_312750.2| Anopheles gambiae str. PEST ENSANGP00000020330 (ENSANGG00000017841), partial mRNA Length = 705 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 catctcctcctcctcgacct 266 |||||||||||||||||||| Sbjct: 417 catctcctcctcctcgacct 398
>ref|XM_312672.2| Anopheles gambiae str. PEST ENSANGP00000023029 (ENSANGG00000020647), partial mRNA Length = 2103 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ctcctcctcctcgacctccc 269 |||||||||||||||||||| Sbjct: 1722 ctcctcctcctcgacctccc 1703
>dbj|AK107037.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-B10, full insert sequence Length = 1713 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 gccgccgcccaccgccgccgcggc 96 |||||||||| ||||||||||||| Sbjct: 159 gccgccgcccgccgccgccgcggc 136
>emb|AJ251089.1|HSA251089 Homo sapiens mRNA for hypothetical protein, clone AV1-56 Length = 1350 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gggccgccgcccaccgccgccgcg 94 ||||||||||||||| |||||||| Sbjct: 914 gggccgccgcccacccccgccgcg 891
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 ccgcatcggcccgccgcccacgcc 348 ||||||||||| |||||||||||| Sbjct: 1919686 ccgcatcggcctgccgcccacgcc 1919709
>dbj|AK066319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067A17, full insert sequence Length = 2156 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 62 ctcgccatggggccgccgcccaccgccgccgc 93 |||||||||| | |||||| |||||||||||| Sbjct: 5 ctcgccatggcggcgccgctcaccgccgccgc 36
>gb|AF167095.1|AF167095 Canis familiaris parathyroid hormone receptor-1 (PTH1) mRNA, complete cds Length = 2177 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ccgccgcccaccgccgccgc 93 |||||||||||||||||||| Sbjct: 1070 ccgccgcccaccgccgccgc 1089
>dbj|AB090821.1| Anopheles gambiae retrotransposon R7Ag2 DNA, complete sequence Length = 6590 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ctcctcctcctcgacctccc 269 |||||||||||||||||||| Sbjct: 5909 ctcctcctcctcgacctccc 5890
>gb|AF038560.1|AF038560 Gallus gallus putative microtubule associated protein (Nau) mRNA, complete cds Length = 5069 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 gggcgggggagacgcggctcccgg 378 ||||||||| |||||||||||||| Sbjct: 290 gggcgggggggacgcggctcccgg 313
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 atcggcccgccgcccacgcc 348 |||||||||||||||||||| Sbjct: 1129712 atcggcccgccgcccacgcc 1129693
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 cgccgcccaccgccgccgcg 94 |||||||||||||||||||| Sbjct: 23840178 cgccgcccaccgccgccgcg 23840197 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 62 ctcgccatggggccgccgcccaccgccgccgc 93 |||||||||| | |||||| |||||||||||| Sbjct: 22021504 ctcgccatggcggcgccgctcaccgccgccgc 22021473
>gb|U75651.1|HSU75651 Human dishevelled 3 (DVL3) mRNA, complete cds Length = 3403 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cgccgcccaccgccgccgcggccg 98 |||||||| ||||||||||||||| Sbjct: 231 cgccgcccgccgccgccgcggccg 208
>gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome 1, complete sequence Length = 209249 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ctcctcctcctcgacctccc 269 |||||||||||||||||||| Sbjct: 201958 ctcctcctcctcgacctccc 201977
>emb|AL365476.1|LMFLUNK02 Leishmania major Friedlin cosmid clones L8382, incomplete shotgun, assembled reads, with VERY preliminary annotation, complete sequence Length = 28334 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccgcccaccgccgccgcggc 96 |||||||||||||||||||| Sbjct: 7456 ccgcccaccgccgccgcggc 7437 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,561,567 Number of Sequences: 3902068 Number of extensions: 3561567 Number of successful extensions: 94525 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90543 Number of HSP's gapped (non-prelim): 3979 length of query: 421 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 399 effective length of database: 17,147,199,772 effective search space: 6841732709028 effective search space used: 6841732709028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
