>ref|XM_467295.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1254

 Score = 42.1 bits (21), Expect = 0.057
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 7   atcaagaggagggaggaagctctcaagag 35
           |||| ||| ||||||||||||||||||||
Sbjct: 436 atcaggagaagggaggaagctctcaagag 464

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.057
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 7        atcaagaggagggaggaagctctcaagag 35
                |||| ||| ||||||||||||||||||||
Sbjct: 28715991 atcaggagaagggaggaagctctcaagag 28716019

>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0459B01
          Length = 163087

 Score = 42.1 bits (21), Expect = 0.057
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 7     atcaagaggagggaggaagctctcaagag 35
             |||| ||| ||||||||||||||||||||
Sbjct: 32564 atcaggagaagggaggaagctctcaagag 32592

>dbj|AK106197.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-F01, full
           insert sequence
          Length = 1255

 Score = 42.1 bits (21), Expect = 0.057
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 7   atcaagaggagggaggaagctctcaagag 35
           |||| ||| ||||||||||||||||||||
Sbjct: 437 atcaggagaagggaggaagctctcaagag 465

>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 0.23
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 4       gacatcaagaggagggagga 23
               ||||||||||||||||||||
Sbjct: 1536679 gacatcaagaggagggagga 1536698

>emb|CR956390.11| Pig DNA sequence from clone PigE-201K20 on chromosome 17, complete
            sequence
          Length = 7495

 Score = 38.2 bits (19), Expect = 0.90
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 12   gaggagggaggaagctctcaaga 34
            ||||||| |||||||||||||||
Sbjct: 2153 gaggaggcaggaagctctcaaga 2131

>gb|AC159209.2| Mus musculus BAC clone RP23-100C6 from chromosome 13, complete sequence
          Length = 212761

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    aagaggagggaggaagct 27
             ||||||||||||||||||
Sbjct: 14113 aagaggagggaggaagct 14130

>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 10     aagaggagggaggaagct 27
              ||||||||||||||||||
Sbjct: 904695 aagaggagggaggaagct 904712

>ref|XM_751823.1| Ustilago maydis 521 hypothetical protein (UM00769.1) partial mRNA
          Length = 993

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 8   tcaagaggagggaggaag 25
           ||||||||||||||||||
Sbjct: 932 tcaagaggagggaggaag 949

>gb|AY150105.1| Newcastle disease virus strain NO-1/85 fusion protein (F) gene,
           partial cds
          Length = 374

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 5   acatcaagaggagggagg 22
           ||||||||||||||||||
Sbjct: 322 acatcaagaggagggagg 339

>gb|AY150102.1| Newcastle disease virus strain HR-267/84 fusion protein (F) gene,
           partial cds
          Length = 374

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 5   acatcaagaggagggagg 22
           ||||||||||||||||||
Sbjct: 322 acatcaagaggagggagg 339

>gb|BC073147.1| Homo sapiens coiled-coil domain containing 63, mRNA (cDNA clone
           MGC:90183 IMAGE:5742508), complete cds
          Length = 1870

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 16  agggaggaagctctcaag 33
           ||||||||||||||||||
Sbjct: 895 agggaggaagctctcaag 912

>gb|BC064580.1| Homo sapiens coiled-coil domain containing 63, mRNA (cDNA clone
           IMAGE:5743825), partial cds
          Length = 1678

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 16  agggaggaagctctcaag 33
           ||||||||||||||||||
Sbjct: 744 agggaggaagctctcaag 761

>gb|BC039432.1| Homo sapiens cDNA clone IMAGE:5303499
          Length = 1042

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 13  aggagggaggaagctctc 30
           ||||||||||||||||||
Sbjct: 557 aggagggaggaagctctc 540

>gb|AC079075.6| Homo sapiens chromosome 15, clone RP11-300G22, complete sequence
          Length = 209955

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 14     ggagggaggaagctctca 31
              ||||||||||||||||||
Sbjct: 154026 ggagggaggaagctctca 154043

>gb|AC013787.15| Homo sapiens chromosome 15, clone RP11-531E13, complete sequence
          Length = 176304

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 14     ggagggaggaagctctca 31
              ||||||||||||||||||
Sbjct: 123285 ggagggaggaagctctca 123268

>dbj|AK123107.1| Homo sapiens cDNA FLJ41112 fis, clone BRACE1000239
          Length = 3444

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 13   aggagggaggaagctctc 30
            ||||||||||||||||||
Sbjct: 2975 aggagggaggaagctctc 2958

>dbj|AK093162.1| Homo sapiens cDNA FLJ35843 fis, clone TESTI2006744
          Length = 1945

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 16   agggaggaagctctcaag 33
            ||||||||||||||||||
Sbjct: 1039 agggaggaagctctcaag 1056

>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 5       acatcaagaggagggagg 22
               ||||||||||||||||||
Sbjct: 1858416 acatcaagaggagggagg 1858399

>gb|AC134860.4| Mus musculus BAC clone RP23-388A16 from chromosome 13, complete sequence
          Length = 206634

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 10     aagaggagggaggaagct 27
              ||||||||||||||||||
Sbjct: 183490 aagaggagggaggaagct 183507

>ref|NM_152591.1| Homo sapiens coiled-coil domain containing 63 (CCDC63), mRNA
          Length = 1945

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 16   agggaggaagctctcaag 33
            ||||||||||||||||||
Sbjct: 1039 agggaggaagctctcaag 1056

>gb|AC013437.8| Homo sapiens BAC clone RP11-190J23 from 2, complete sequence
          Length = 167424

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 10    aagaggagggaggaagct 27
             ||||||||||||||||||
Sbjct: 22864 aagaggagggaggaagct 22847

>gb|BC044815.1| Homo sapiens, clone IMAGE:5166270, mRNA
          Length = 1944

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 16   agggaggaagctctcaag 33
            ||||||||||||||||||
Sbjct: 1004 agggaggaagctctcaag 1021

>gb|AC015853.8|AC015853 Homo sapiens chromosome 17, clone RP5-1029F21, complete sequence
          Length = 97351

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 13    aggagggaggaagctctc 30
             ||||||||||||||||||
Sbjct: 18580 aggagggaggaagctctc 18597

>gb|AC154140.7| Mus musculus chromosome 1, clone RP23-184B11, complete sequence
          Length = 233171

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 15     gagggaggaagctctcaagagc 36
              |||| |||||||||||||||||
Sbjct: 178395 gaggtaggaagctctcaagagc 178416

>gb|AC145841.3| Macropus eugenii clone ME_KBa-363H17, complete sequence
          Length = 144488

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    aagaggagggaggaagct 27
             ||||||||||||||||||
Sbjct: 36496 aagaggagggaggaagct 36513

>gb|AC157793.6| Mus musculus chromosome 1, clone RP24-175H22, complete sequence
          Length = 130354

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 15     gagggaggaagctctcaagagc 36
              |||| |||||||||||||||||
Sbjct: 101201 gaggtaggaagctctcaagagc 101180

>gb|AC121256.22| Mus musculus chromosome 1, clone RP24-576N23, complete sequence
          Length = 182551

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 15    gagggaggaagctctcaagagc 36
             |||| |||||||||||||||||
Sbjct: 92730 gaggtaggaagctctcaagagc 92709


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 435,259
Number of Sequences: 3902068
Number of extensions: 435259
Number of successful extensions: 159121
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 158928
Number of HSP's gapped (non-prelim): 193
length of query: 36
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 16
effective length of database: 17,155,003,908
effective search space: 274480062528
effective search space used: 274480062528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)