ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart50b08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR848708.12| Wallaby DNA sequence from clone MEKBa-201B9, complete sequence Length = 194524 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccattcccacc 40 |||||||||||||||||||||||||| Sbjct: 92319 ccttcccttcccttcccattcccacc 92294
>gb|AC141886.3| Mus musculus BAC clone RP24-87G24 from chromosome 7, complete sequence Length = 173677 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccattccc 37 ||||||||||||||||||||||| Sbjct: 20852 ccttcccttcccttcccattccc 20830
>gb|AC121830.3| Mus musculus BAC clone RP24-63N24 from chromosome 7, complete sequence Length = 211478 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccattccc 37 ||||||||||||||||||||||| Sbjct: 193295 ccttcccttcccttcccattccc 193273
>gb|AC004458.1| Homo sapiens BAC clone CTB-57J11 from 7, complete sequence Length = 168056 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccattcc 36 |||||||||||||||||||||| Sbjct: 133905 ccttcccttcccttcccattcc 133926
>gb|AC133509.2| Mus musculus BAC clone RP23-402L22 from chromosome 19, complete sequence Length = 214658 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccattcc 36 |||||||||||||||||||||| Sbjct: 54915 ccttcccttcccttcccattcc 54936
>gb|AC090994.8| Homo sapiens chromosome 8, clone RP11-536K17, complete sequence Length = 200326 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccattcc 36 |||||||||||||||||||||| Sbjct: 36619 ccttcccttcccttcccattcc 36640
>emb|BX663527.6| Chicken DNA sequence from clone WAG-112A23, complete sequence Length = 111067 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 ccgcgccttcccttcccttccc 31 |||||||||||||||||||||| Sbjct: 50288 ccgcgccttcccttcccttccc 50267 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 ccgcgccttcccttcccttccc 31 |||||||||||||||||||||| Sbjct: 50258 ccgcgccttcccttcccttccc 50237 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 ccgcgccttcccttcccttccc 31 |||||||||||||||||||||| Sbjct: 50128 ccgcgccttcccttcccttccc 50107
>gb|AC154592.2| Mus musculus BAC clone RP23-249J17 from chromosome 14, complete sequence Length = 211647 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccattcc 36 |||||||||||||||||||||| Sbjct: 75901 ccttcccttcccttcccattcc 75922
>gb|AC009969.10| Homo sapiens BAC clone RP11-418G17 from 2, complete sequence Length = 166892 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccattcc 36 |||||||||||||||||||||| Sbjct: 12014 ccttcccttcccttcccattcc 11993
>gb|AC137674.2| Homo sapiens chromosome 3 clone RP11-348I13, complete sequence Length = 182649 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccattcc 36 |||||||||||||||||||||| Sbjct: 168077 ccttcccttcccttcccattcc 168098
>ref|XM_465493.1| Oryza sativa (japonica cultivar-group), mRNA Length = 375 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ggcgacggtgctgtgcgcgcc 335 ||||||||||||||||||||| Sbjct: 135 ggcgacggtgctgtgcgcgcc 155
>gb|AC140843.2| Mus musculus BAC clone RP24-443L17 from chromosome 14, complete sequence Length = 124918 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ttcccttcccttcccattcccaccc 41 ||||||||||||||| ||||||||| Sbjct: 106587 ttcccttcccttccctttcccaccc 106563
>gb|AC005091.1| Homo sapiens BAC clone CTA-318C11 from 7, complete sequence Length = 110535 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 cttcccttcccattcccaccc 41 ||||||||||||||||||||| Sbjct: 94414 cttcccttcccattcccaccc 94394
>emb|AL359385.28| Human DNA sequence from clone RP11-375N9 on chromosome 10 Contains the gene for a novel protein (MGC14258), a CD164 antigen, sialomucin (CD164) pseudogene and two CpG islands, complete sequence Length = 99408 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 ttcccttcccttcccattccc 37 ||||||||||||||||||||| Sbjct: 50569 ttcccttcccttcccattccc 50549
>gb|AC130897.3| Homo sapiens 3 BAC RP13-1041F12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 39925 Score = 42.1 bits (21), Expect = 1.1 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccattcccacccgcctcc 47 ||||||||||||||||| ||||||||| ||||| Sbjct: 26640 ccttcccttcccttccc-ttcccacccccctcc 26671
>gb|AC147316.4| Pan troglodytes BAC clone RP43-49H2 from chromosome 7, complete sequence Length = 209609 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 cttcccttcccattcccaccc 41 ||||||||||||||||||||| Sbjct: 2870 cttcccttcccattcccaccc 2850
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 cttcccttcccttcccattcc 36 ||||||||||||||||||||| Sbjct: 15494932 cttcccttcccttcccattcc 15494912
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ggcgacggtgctgtgcgcgcc 335 ||||||||||||||||||||| Sbjct: 15589406 ggcgacggtgctgtgcgcgcc 15589426
>gb|AC140058.5| Homo sapiens 3 BAC RP13-1007C7 (Roswell park Cancer Institute Human BAC Library) complete sequence Length = 62693 Score = 42.1 bits (21), Expect = 1.1 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccattcccacccgcctcc 47 ||||||||||||||||| ||||||||| ||||| Sbjct: 34690 ccttcccttcccttccc-ttcccacccccctcc 34721
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 agggaggcggagccggcgacggtgc 325 |||||||||||||||||| |||||| Sbjct: 7643846 agggaggcggagccggcggcggtgc 7643822
>gb|AY138246.1| Gallus gallus p15INK4b tumor suppressor and ARF tumor suppressor genes, complete cds Length = 18365 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 aggcagagggggagaggcaac 85 ||||||||||||||||||||| Sbjct: 17693 aggcagagggggagaggcaac 17713
>gb|AC097226.3| Papio anubis clone RP41-323M22, complete sequence Length = 88121 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 cttcccttcccattcccaccc 41 ||||||||||||||||||||| Sbjct: 70019 cttcccttcccattcccaccc 69999
>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0689B09 Length = 144932 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 cttcccttcccttcccattcc 36 ||||||||||||||||||||| Sbjct: 15787 cttcccttcccttcccattcc 15767
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1299_A11 Length = 160099 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 cttcccttcccttcccattcc 36 ||||||||||||||||||||| Sbjct: 144224 cttcccttcccttcccattcc 144204
>gb|AC100956.9| Mus musculus chromosome 7, clone RP23-74B10, complete sequence Length = 245367 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccattc 35 ||||||||||||||||||||| Sbjct: 231391 ccttcccttcccttcccattc 231411
>emb|BX324233.5| Zebrafish DNA sequence from clone CH211-230L11 in linkage group 22, complete sequence Length = 157470 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cccttcccattcccacccgcc 44 ||||||||||||||||||||| Sbjct: 13538 cccttcccattcccacccgcc 13558
>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0644G05 Length = 143119 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ggcgacggtgctgtgcgcgcc 335 ||||||||||||||||||||| Sbjct: 116966 ggcgacggtgctgtgcgcgcc 116986
>dbj|AK111825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058B03, full insert sequence Length = 4525 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ggcgacggtgctgtgcgcgcc 335 ||||||||||||||||||||| Sbjct: 182 ggcgacggtgctgtgcgcgcc 202
>dbj|AK062950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-C07, full insert sequence Length = 446 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ggcgacggtgctgtgcgcgcc 335 ||||||||||||||||||||| Sbjct: 129 ggcgacggtgctgtgcgcgcc 149
>gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, complete sequence Length = 190623 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ttcccttcccttcccattcccaccc 41 ||||||||||||||| ||||||||| Sbjct: 189513 ttcccttcccttccctttcccaccc 189537
>emb|AL121981.17|HS1061C18 Human DNA sequence from clone RP5-1061C18 on chromosome 3p36.22-36.33 Contains the 5' part of the DLG1 gene encoding the discs protein (large Drosophila homolog 1, presynaptic protein SAP97) and a CpG island, complete sequence Length = 148493 Score = 42.1 bits (21), Expect = 1.1 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccattcccacccgcctcc 47 ||||||||||||||||| ||||||||| ||||| Sbjct: 7958 ccttcccttcccttccc-ttcccacccccctcc 7927
>emb|AL845286.8| Mouse DNA sequence from clone RP23-328F20 on chromosome 2, complete sequence Length = 195593 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccattc 35 ||||||||||||||||||||| Sbjct: 56269 ccttcccttcccttcccattc 56249
>gb|AC137124.17| Mus musculus chromosome 3, clone RP24-229P11, complete sequence Length = 172081 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 146754 ccttcccttcccttcccatt 146773
>gb|AE009429.1| Agrobacterium tumefaciens str. C58 Ti plasmid, section 12 of 21 of the complete sequence Length = 11127 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 gccttcccttcccttcccattccc 37 |||||||||||||||||| ||||| Sbjct: 44 gccttcccttcccttccccttccc 21
>gb|AE009428.1| Agrobacterium tumefaciens str. C58 Ti plasmid, section 11 of 21 of the complete sequence Length = 11293 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 gccttcccttcccttcccattccc 37 |||||||||||||||||| ||||| Sbjct: 11277 gccttcccttcccttccccttccc 11254
>gb|AE007937.1| Agrobacterium tumefaciens str. C58 plasmid Ti, section 15 of 20 of the complete sequence Length = 10168 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 gccttcccttcccttcccattccc 37 |||||||||||||||||| ||||| Sbjct: 119 gccttcccttcccttccccttccc 96
>ref|NM_014864.2| Homo sapiens family with sequence similarity 20, member B (FAM20B), mRNA Length = 5960 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gccttcccttcccttcccat 33 |||||||||||||||||||| Sbjct: 5171 gccttcccttcccttcccat 5190
>gb|AC023175.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-69B14, complete sequence Length = 195667 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cttcccttcccttcccattc 35 |||||||||||||||||||| Sbjct: 86249 cttcccttcccttcccattc 86268
>gb|AC120837.6| Mus musculus Strain C57BL6/J chromosome 11 BAC, RP23-439E2, Complete Sequence, complete sequence Length = 211996 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ggcagagggggagaggcaac 85 |||||||||||||||||||| Sbjct: 209233 ggcagagggggagaggcaac 209252
>gb|AC098587.5| Homo sapiens BAC clone RP11-231C18 from 4, complete sequence Length = 132164 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 10846 ccttcccttcccttcccatt 10865
>emb|AL356107.21| Human DNA sequence from clone RP11-484D5 on chromosome 13 Contains the gene for a novel protein similar to transforming growth factor beta-stimulated protein (TSC-22), SMARCE1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 ) pseudogene and a CpG island, complete sequence Length = 140499 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cttcccttcccttcccattc 35 |||||||||||||||||||| Sbjct: 75588 cttcccttcccttcccattc 75607
>emb|AL139132.16| Human DNA sequence from clone RP11-177A2 on chromosome 1q25.1-31.3 Contains the FAM20B gene for family with sequence similarity 20 (member B), theTOR3A gene for torsin family 3 (member A), the 3' end of the ABL2 gene for v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene), a novel gene and three CpG islands, complete sequence Length = 157866 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gccttcccttcccttcccat 33 |||||||||||||||||||| Sbjct: 110057 gccttcccttcccttcccat 110076
>gb|AC130455.2| Homo sapiens chromosome 16 clone CTA-362G6, complete sequence Length = 149490 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 15746 ccttcccttcccttcccatt 15727
>emb|AL031965.8|HS355N11 Human DNA sequence from clone RP3-355N11 on chromosome 1q24.1-24.3 Contains the 5' end of a novel gene (FLJ23550), complete sequence Length = 78336 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 11529 ccttcccttcccttcccatt 11510
>gb|AC074335.11| Mus Musculus Strain C57BL6/J Chromosome 18 BAC, RP23-127B9, complete sequence Length = 201643 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccattccca 38 ||||||||||||||||| |||||| Sbjct: 132187 ccttcccttcccttccctttccca 132164
>emb|AL645594.9| Mouse DNA sequence from clone RP23-316C11 on chromosome 11 Contains the Cct6b gene for chaperonin subunit 6b (zeta), a barrier to autointegration factor 1 (Banf1) pseudogene, a GTP binding protein 3 (Gtpbp3) pseudogene, a ribosomal protein S20 (Rps20) pseudogene, three novel genes, the Lig3 gene for ATP-dependent DNA ligase III,, complete sequence Length = 178364 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggcagagggggagaggcaac 85 |||||||||||||||||||| Sbjct: 91003 ggcagagggggagaggcaac 90984
>gb|AC032044.28| Homo sapiens chromosome 17, clone RP11-818O24, complete sequence Length = 199656 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 163593 ccttcccttcccttcccatt 163612
>emb|AJ720340.1| Gallus gallus mRNA for hypothetical protein, clone 15k18 Length = 2403 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 gcgccttcccttcccttccc 31 |||||||||||||||||||| Sbjct: 2 gcgccttcccttcccttccc 21
>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195757 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ttcccttcccttcccattcc 36 |||||||||||||||||||| Sbjct: 153998 ttcccttcccttcccattcc 154017
>gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167097 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gccttcccttcccttcccat 33 |||||||||||||||||||| Sbjct: 140999 gccttcccttcccttcccat 141018
>gb|AC023713.4| Drosophila melanogaster X BAC RP98-24A2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181178 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cccttcccttcccattccca 38 |||||||||||||||||||| Sbjct: 104140 cccttcccttcccattccca 104159
>emb|AL112987.1|CNS01AIR Botrytis cinerea strain T4 cDNA library Length = 900 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcccttcccttcccattccc 37 |||||||||||||||||||| Sbjct: 567 tcccttcccttcccattccc 586
>gb|AC140504.2| Homo sapiens chromosome 16 clone RP11-1021N1, complete sequence Length = 212387 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 192394 ccttcccttcccttcccatt 192375
>gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosome 16, complete sequence Length = 202286 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccattccca 38 ||||||||||||||||| |||||| Sbjct: 94693 ccttcccttcccttccctttccca 94670
>dbj|D50017.2| Homo sapiens PDGFRA gene for alpha-platelet-derived growth factor receptor, complete cds Length = 17087 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 9983 ccttcccttcccttcccatt 10002
>gb|AC009951.10| Homo sapiens BAC clone RP11-107E5 from 2, complete sequence Length = 159791 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 153601 ccttcccttcccttcccatt 153620
>ref|NM_001007843.1| Gallus gallus similar to chromosome 9 open reading frame 74 (LOC417221), mRNA Length = 2403 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 gcgccttcccttcccttccc 31 |||||||||||||||||||| Sbjct: 2 gcgccttcccttcccttccc 21
>dbj|AB007944.1| Homo sapiens mRNA for KIAA0475 protein, partial cds Length = 5983 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gccttcccttcccttcccat 33 |||||||||||||||||||| Sbjct: 5212 gccttcccttcccttcccat 5231
>gb|U95740.1|HUU95740 Human Chromosome 16 BAC clone CIT987SK-A-362G6, complete sequence Length = 149480 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 133736 ccttcccttcccttcccatt 133755
>emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chromosome 16, complete sequence Length = 194283 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccattccca 38 ||||||||||||||||| |||||| Sbjct: 117145 ccttcccttcccttccctttccca 117122
>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete sequence Length = 249021 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ttcccttcccttcccattcc 36 |||||||||||||||||||| Sbjct: 234551 ttcccttcccttcccattcc 234532
>gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 of 74 of the complete sequence Length = 316794 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cccttcccttcccattccca 38 |||||||||||||||||||| Sbjct: 216815 cccttcccttcccattccca 216796
>gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 of 74 of the complete sequence Length = 310993 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gccttcccttcccttcccat 33 |||||||||||||||||||| Sbjct: 132700 gccttcccttcccttcccat 132681
>gb|AC133159.3| Mus musculus BAC clone RP24-503F11 from 13, complete sequence Length = 156151 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 64073 ccttcccttcccttcccatt 64054
>gb|BC051794.1| Homo sapiens family with sequence similarity 20, member B, mRNA (cDNA clone MGC:57628 IMAGE:5492043), complete cds Length = 5960 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gccttcccttcccttcccat 33 |||||||||||||||||||| Sbjct: 5171 gccttcccttcccttcccat 5190
>emb|AL713881.1|CNS07YOX Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 527G2 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 143241 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggcagagggggagaggcaac 85 |||||||||||||||||||| Sbjct: 86797 ggcagagggggagaggcaac 86778
>gb|AC130457.2| Homo sapiens chromosome 16 clone CTA-381E11, complete sequence Length = 129316 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccttcccttcccttcccatt 34 |||||||||||||||||||| Sbjct: 107073 ccttcccttcccttcccatt 107054
>emb|AL713886.1|CNS07YOY Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 247A17 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 126128 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggcagagggggagaggcaac 85 |||||||||||||||||||| Sbjct: 20218 ggcagagggggagaggcaac 20199 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,443,438 Number of Sequences: 3902068 Number of extensions: 2443438 Number of successful extensions: 116024 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 115289 Number of HSP's gapped (non-prelim): 745 length of query: 335 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 313 effective length of database: 17,147,199,772 effective search space: 5367073528636 effective search space used: 5367073528636 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
