ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart49f12 |
|---|---|
| Clone Library Name | barley_pub |
>PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) Length = 389 Score = 154 bits (390), Expect = 4e-38 Identities = 83/92 (90%), Positives = 84/92 (91%) Frame = +1 Query: 4 KVGLRDDVLAAVKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEE 183 KV LR DVLAAVKS DMA+LYESL A GVLE DAALLAEMRGRIEEE RK DEKIADAEE Sbjct: 34 KVDLRADVLAAVKSDDMASLYESLGAGGVLETDAALLAEMRGRIEEEIRKLDEKIADAEE 93 Query: 184 NLGESEVREAHLAKSLYFIRVGEKEKALEQLK 279 NLGESEVREAHLAKSLYFIRVGEKEKALEQLK Sbjct: 94 NLGESEVREAHLAKSLYFIRVGEKEKALEQLK 125
>PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulatory subunit 6| Length = 387 Score = 122 bits (306), Expect = 2e-28 Identities = 62/92 (67%), Positives = 74/92 (80%) Frame = +1 Query: 4 KVGLRDDVLAAVKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEE 183 KV L+ +VL ++SH MA LYE+L A VL++D +LL MR EEE +K DEKIADAEE Sbjct: 32 KVQLKSEVLDFIRSHGMAPLYETLIASSVLDLDQSLLESMRAANEEELKKLDEKIADAEE 91 Query: 184 NLGESEVREAHLAKSLYFIRVGEKEKALEQLK 279 NLGESEVREAHLAK+LYFIR+ +KEKALEQLK Sbjct: 92 NLGESEVREAHLAKALYFIRISDKEKALEQLK 123
>PSD6_MOUSE (Q99JI4) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) Length = 389 Score = 80.5 bits (197), Expect = 1e-15 Identities = 38/85 (44%), Positives = 63/85 (74%) Frame = +1 Query: 13 LRDDVLAAVKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLG 192 +R++++AAV+ ++MA YE+L +MD LL++M+ EEE ++ DE++ DAE+NLG Sbjct: 37 VREELMAAVRENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLG 96 Query: 193 ESEVREAHLAKSLYFIRVGEKEKAL 267 ESE+R+A +AK+ Y ++G+KE AL Sbjct: 97 ESEIRDAMMAKAEYLCQIGDKEGAL 121
>PSD6_HUMAN (Q15008) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) (Proteasome regulatory particle subunit p44S10) (Phosphonoformate immuno-associated protein 4) (Breast cancer-associated protein SGA-113M) Length = 389 Score = 79.7 bits (195), Expect = 2e-15 Identities = 38/85 (44%), Positives = 62/85 (72%) Frame = +1 Query: 13 LRDDVLAAVKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLG 192 +RD+++AAV+ ++MA YE+L ++D LL +M+ E+E ++ DE++ DAE+NLG Sbjct: 37 VRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLG 96 Query: 193 ESEVREAHLAKSLYFIRVGEKEKAL 267 ESE+R+A +AK+ Y R+G+KE AL Sbjct: 97 ESEIRDAMMAKAEYLCRIGDKEGAL 121
>PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (Rpn7 protein) Length = 389 Score = 65.1 bits (157), Expect = 4e-11 Identities = 35/84 (41%), Positives = 51/84 (60%) Frame = +1 Query: 13 LRDDVLAAVKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLG 192 L+ +L A+++ +MA YE + ++ +D LLA M+ E + D I DAE+NLG Sbjct: 37 LKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLARMKENNRVEVEQLDAAIEDAEKNLG 96 Query: 193 ESEVREAHLAKSLYFIRVGEKEKA 264 E EVREA+L KS Y R+G+K A Sbjct: 97 EMEVREANLKKSEYLCRIGDKAAA 120
>PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit rpn-7) Length = 410 Score = 63.5 bits (153), Expect = 1e-10 Identities = 31/78 (39%), Positives = 50/78 (64%) Frame = +1 Query: 37 VKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAH 216 +K DMA YE + AD + +DA LA M+ +++ + ++ DAE+NLGESEVR+ Sbjct: 59 IKEFDMAPFYELVCADFKIVVDATQLAAMKAANQKKIDEITAEVEDAEKNLGESEVRQGL 118 Query: 217 LAKSLYFIRVGEKEKALE 270 L K Y+ ++G+K+ AL+ Sbjct: 119 LRKFEYYCQIGDKDNALK 136
>RPN7_SCHPO (Q10335) Probable 26S proteasome regulatory subunit rpn7| Length = 409 Score = 52.0 bits (123), Expect = 4e-07 Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 4/88 (4%) Frame = +1 Query: 19 DDVLAAVKSHDMAALYESLAAD----GVLEMDAALLAEMRGRIEEETRKFDEKIADAEEN 186 D + +A++ HD+A LY+ L+ + ++ D+ L M + EE+ +FD+ I DA+E Sbjct: 46 DTLFSAIRDHDLAPLYKYLSENPKTSASIDFDSNFLNSMIKKNEEKLAEFDKAIEDAQEL 105 Query: 187 LGESEVREAHLAKSLYFIRVGEKEKALE 270 GE E+ EA K+ Y+ + ++E+ ++ Sbjct: 106 NGEHEILEAMKNKADYYTNICDRERGVQ 133
>MRCKB_MOUSE (Q7TT50) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)| (CDC42-binding protein kinase beta) (Myotonic dystrophy kinase-related CDC42-binding kinase beta) (Myotonic dystrophy protein kinase-like beta) (MRCK beta) (DMPK-like beta) Length = 1713 Score = 33.5 bits (75), Expect = 0.14 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = +1 Query: 91 LEMDAALLAEMRGR--IEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEK 261 LE+ +AL AE+R + ++EE RK + E L ESE + L + + +R +EK Sbjct: 877 LELQSALEAEIRAKQLVQEELRKVKDSSLAFESKLKESEAKNRELLEEMQSLRKRMEEK 935
>ASSY_SYNPX (Q7U3B9) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 403 Score = 31.2 bits (69), Expect = 0.72 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -2 Query: 159 VELAGLLLDPAAHLREQRRVHLQHAVGRQRLVQRRHV 49 V + G +LDP A +RE R+ H +GR +++ R V Sbjct: 230 VAINGQVLDPVAMIREANRLAGSHGIGRLDMIENRVV 266
>LEU2_CLOAB (Q97EE0) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 422 Score = 30.8 bits (68), Expect = 0.94 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = +1 Query: 67 ESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLA---KSLYF 237 E+ A +G+ +D + M+GR + E +KF DA+E+ S V E L+ ++ F Sbjct: 222 EAGAKNGIFPVDEKTIEYMKGRSDRELKKF-----DADEDAEYSRVIEIDLSTLKPTVAF 276 Query: 238 IRVGEKEKALEQL 276 + E K ++Q+ Sbjct: 277 PHLPENTKTIDQV 289
>MUTS2_CLOAB (Q97GM6) MutS2 protein| Length = 788 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +1 Query: 115 AEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSL 231 +E R R++E +K EK+ +AEE+L SE + KS+ Sbjct: 601 SEARQRLQESRQKLKEKLNNAEESLNISERDQGEALKSV 639
>RRBP1_MOUSE (Q99PL5) Ribosome-binding protein 1 (Ribosome receptor protein)| (mRRp) Length = 1605 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +1 Query: 88 VLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHL 219 +L +L +++ +EEE R + K+ AEE L +S V HL Sbjct: 1333 ILAETEGMLKDLQKSVEEEERVWKAKVGAAEEELHKSRVTVKHL 1376
>SYT_THET2 (Q72HH1) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 659 Score = 30.0 bits (66), Expect = 1.6 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = +1 Query: 88 VLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKA 264 V E E+ GR++E + + AD ++ +R+A + K Y + VGE+EKA Sbjct: 565 VSEKQEGYAREVAGRLKEAGLRAE---ADTRPERMQARIRDAEVQKVPYVLVVGEREKA 620
>SWAP_CAEEL (Q10580) Protein SWAP (Suppressor of white apricot protein homolog)| Length = 749 Score = 30.0 bits (66), Expect = 1.6 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 3/34 (8%) Frame = +1 Query: 118 EMRGRIEEETRKFDEKIADA---EENLGESEVRE 210 E R ++EEETRK EKI+++ +N G S+ RE Sbjct: 616 EERSKLEEETRKKAEKISESLSERKNTGRSDRRE 649
>YHES_ECOLI (P63389) Hypothetical ABC transporter ATP-binding protein yheS| Length = 637 Score = 30.0 bits (66), Expect = 1.6 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 4/38 (10%) Frame = +1 Query: 130 RIEEETRKFDEKIADAEENLGESEV----REAHLAKSL 231 R+E+E K + ++A AEE LG+SE+ R+A L L Sbjct: 566 RLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACL 603
>YHES_ECO57 (P63390) Hypothetical ABC transporter ATP-binding protein yheS| Length = 637 Score = 30.0 bits (66), Expect = 1.6 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 4/38 (10%) Frame = +1 Query: 130 RIEEETRKFDEKIADAEENLGESEV----REAHLAKSL 231 R+E+E K + ++A AEE LG+SE+ R+A L L Sbjct: 566 RLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACL 603
>ISPE_CAUCR (Q9A8L7) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 295 Score = 30.0 bits (66), Expect = 1.6 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +1 Query: 13 LRDDVLAAVKSHDMAALYESLAADGVLEMDA-ALLAEMRG 129 LRD + A+ D+ AL SL ADG + A AL+AE RG Sbjct: 120 LRDALAPALSDDDLEALAASLGADGAACLRARALIAEGRG 159
>SYT_THET8 (P56881) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 659 Score = 29.6 bits (65), Expect = 2.1 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +1 Query: 118 EMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKA 264 E+ GR++E + + AD ++ +R+A + K Y + VGE+EKA Sbjct: 575 EVAGRLKEAGLRAE---ADTRPERMQARIRDAEVQKVPYILVVGEREKA 620
>AMPA_BACHK (Q6HBY2) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 494 Score = 29.6 bits (65), Expect = 2.1 Identities = 20/77 (25%), Positives = 39/77 (50%) Frame = +1 Query: 28 LAAVKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVR 207 LA+ ++ +A E + V E+D A +++ +EE+ +K +LG+++V Sbjct: 8 LASHEAVVVALFEEEKTSSFVQELDKAFEGQLQVLLEEKELSTKKKAISKVHSLGKTDV- 66 Query: 208 EAHLAKSLYFIRVGEKE 258 K YF+ +G+KE Sbjct: 67 -----KRYYFVGLGKKE 78
>AMPA_BACAN (Q81XS5) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 494 Score = 29.6 bits (65), Expect = 2.1 Identities = 20/77 (25%), Positives = 39/77 (50%) Frame = +1 Query: 28 LAAVKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVR 207 LA+ ++ +A E + V E+D A +++ +EE+ +K +LG+++V Sbjct: 8 LASHEAVVVALFEEEKTSSFVQELDKAFEGQLQVLLEEKELSTKKKAISKVHSLGKTDV- 66 Query: 208 EAHLAKSLYFIRVGEKE 258 K YF+ +G+KE Sbjct: 67 -----KRYYFVGLGKKE 78
>RNC_LACSS (Q38XR8) Ribonuclease III (EC 3.1.26.3) (RNase III)| Length = 230 Score = 29.3 bits (64), Expect = 2.7 Identities = 24/73 (32%), Positives = 33/73 (45%) Frame = +1 Query: 61 LYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFI 240 L E L DG +E+D LLAE+ R+F+ + + LG R A+ Sbjct: 166 LQEFLQQDGEIEIDYQLLAEVG---PSHDRQFEVDVLVGDRVLGSGVGRNKKAAEQ---- 218 Query: 241 RVGEKEKALEQLK 279 +KALEQLK Sbjct: 219 --AAAKKALEQLK 229
>INCE_CHICK (P53352) Inner centromere protein| Length = 877 Score = 29.3 bits (64), Expect = 2.7 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%) Frame = +1 Query: 118 EMRGRIEEETRKFDEKIADA-EENLGESEVREAHLAKSLYFIRV-------GEKEKALEQ 273 E + RIE++ FDEK A EE L E ++++ AK + K+KAL+Q Sbjct: 562 ERKRRIEQKLALFDEKTEKAREERLAEEKIKKRAAAKKMEEAEARRRQDEEARKQKALQQ 621
>SYTM_ARATH (O04630) Threonyl-tRNA synthetase, mitochondrial precursor (EC| 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) Length = 709 Score = 29.3 bits (64), Expect = 2.7 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 12/60 (20%) Frame = +1 Query: 133 IEEETRKFDEKI------------ADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQL 276 I E+++++ EK+ AD + + +VREA LA+ Y + VGE E A Q+ Sbjct: 620 ISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKKVREAQLAQYNYILVVGETEAATGQV 679
>RRBP1_HUMAN (Q9P2E9) Ribosome-binding protein 1 (Ribosome receptor protein) (180| kDa ribosome receptor homolog) (ES/130-related protein) Length = 1410 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/59 (28%), Positives = 32/59 (54%) Frame = +1 Query: 88 VLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKA 264 +L +L +++ +EEE + + K+ AEE L +S V HL + + ++ GE E + Sbjct: 1134 ILAETEGMLRDLQKSVEEEEQVWRAKVGAAEEELQKSRVTVKHLEEIVEKLK-GELESS 1191
>SYV_BACHK (Q6HD68) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = +1 Query: 100 DAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 279 D L E R R+E+E KFD+++ ++ L + +AK+ + GE+ K + L+ Sbjct: 812 DLINLDEERARLEKELEKFDKEVERVQKKLS----NQGFVAKAPAAVIEGERAKEQDYLE 867
>SYV_BACCZ (Q633Y6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = +1 Query: 100 DAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 279 D L E R R+E+E KFD+++ ++ L + +AK+ + GE+ K + L+ Sbjct: 812 DLINLDEERARLEKELEKFDKEVERVQKKLS----NQGFVAKAPAAVIEGERAKEQDYLE 867
>SYV_BACCR (Q817R6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = +1 Query: 100 DAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 279 D L E R R+E+E KFD+++ ++ L + +AK+ + GE+ K + L+ Sbjct: 812 DLINLDEERARLEKELEKFDKEVERVQKKLS----NQGFVAKAPAAVIEGERAKEQDYLE 867
>SYV_BACC1 (Q72ZW8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = +1 Query: 100 DAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 279 D L E R R+E+E KFD+++ ++ L + +AK+ + GE+ K + L+ Sbjct: 812 DLINLDEERARLEKELEKFDKEVERVQKKLS----NQGFVAKAPAAVIEGERAKEQDYLE 867
>SYV_BACAN (Q81LD3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = +1 Query: 100 DAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 279 D L E R R+E+E KFD+++ ++ L + +AK+ + GE+ K + L+ Sbjct: 812 DLINLDEERARLEKELEKFDKEVERVQKKLS----NQGFVAKAPAAVIEGERAKEQDYLE 867
>ASSY_NITEU (Q82UP5) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 404 Score = 28.5 bits (62), Expect = 4.6 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -2 Query: 171 RNLLVELAGLLLDPAAHLREQRRVHLQHAVGRQRLVQRRHV 49 R +V L G L PAA L ++ +H +GR LV+ R+V Sbjct: 228 RGDIVALNGERLSPAAILTRLNQLGGKHGIGRLDLVENRYV 268
>TPM_MIMNO (Q9GZ69) Tropomyosin| Length = 284 Score = 28.5 bits (62), Expect = 4.6 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = +1 Query: 85 GVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHL--AKSLYFIRVGEKE 258 G L+ LL E R EE+ EK+ +A + ESE L + Y R+ E E Sbjct: 86 GGLQRRLTLLEEDYERSEEKLNSTTEKLEEASKAADESERNRKVLEGRSNSYEERIDELE 145 Query: 259 KALEQLK 279 K LE K Sbjct: 146 KQLETAK 152
>TPM_HELAS (O97192) Tropomyosin (Allergen Hel as 1)| Length = 284 Score = 28.5 bits (62), Expect = 4.6 Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 8/75 (10%) Frame = +1 Query: 70 SLAADGVLEMDAALLAEMRGRIEEETRKFDE---KIADAEENLGESEVR-EAHLAKSLYF 237 SLA D L+ A L E + E+ RKFDE K+A E +L +E R EA AK L Sbjct: 134 SLADDERLDGLEAQLKEAKYIAEDAERKFDEAARKLAITEVDLERAEARLEAAEAKILEL 193 Query: 238 IR----VGEKEKALE 270 VG K+LE Sbjct: 194 EEELKVVGNNMKSLE 208
>TPM2_RAT (P58775) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 28.5 bits (62), Expect = 4.6 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 6/67 (8%) Frame = +1 Query: 94 EMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVR----EAHLAKSLYFIRVGEKE- 258 E AL +++G E+E K+ E + DA+E L ++E + EA +A I++ E+E Sbjct: 41 EEQQALQKKLKGT-EDEVEKYSESVKDAQEKLEQAEKKATDAEADVASLNRRIQLVEEEL 99 Query: 259 -KALEQL 276 +A E+L Sbjct: 100 DRAQERL 106
>TPM2_RABIT (P58776) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 28.5 bits (62), Expect = 4.6 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 6/67 (8%) Frame = +1 Query: 94 EMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVR----EAHLAKSLYFIRVGEKE- 258 E AL +++G E+E K+ E + DA+E L ++E + EA +A I++ E+E Sbjct: 41 EEQQALQKKLKGT-EDEVEKYSESVKDAQEKLEQAEKKATDAEADVASLNRRIQLVEEEL 99 Query: 259 -KALEQL 276 +A E+L Sbjct: 100 DRAQERL 106
>TPM2_MOUSE (P58774) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 28.5 bits (62), Expect = 4.6 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 6/67 (8%) Frame = +1 Query: 94 EMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVR----EAHLAKSLYFIRVGEKE- 258 E AL +++G E+E K+ E + DA+E L ++E + EA +A I++ E+E Sbjct: 41 EEQQALQKKLKGT-EDEVEKYSESVKDAQEKLEQAEKKATDAEADVASLNRRIQLVEEEL 99 Query: 259 -KALEQL 276 +A E+L Sbjct: 100 DRAQERL 106
>OLR1_MOUSE (Q9EQ09) Oxidized low-density lipoprotein receptor 1 (Ox-LDL| receptor 1) (Lectin-type oxidized LDL receptor 1) (Lectin-like oxidized LDL receptor 1) (Lectin-like oxLDL receptor 1) (LOX-1) [Contains: Oxidized low-density lipoprotein receptor 1, Length = 363 Score = 28.5 bits (62), Expect = 4.6 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 16/69 (23%) Frame = +1 Query: 118 EMRGRIEEETRKFDEKIADAEE----------------NLGESEVREAHLAKSLYFIRVG 249 E++G+I+ TRK DEK + EE N E RE +++ Sbjct: 146 ELKGKIDTITRKLDEKSKEQEELLQMIQNLQEALQRAANSSEESQRELKGKIDTLTLKLN 205 Query: 250 EKEKALEQL 276 EK K E+L Sbjct: 206 EKSKEQEEL 214
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 28.5 bits (62), Expect = 4.6 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Frame = +1 Query: 67 ESLAADGVLEMDAA-----LLAEMRGRIEEETRKFDEKIADAEENLGESE 201 E+LAAD L M+ +AE+ G E+E EKI EE G E Sbjct: 185 ENLAADDPLPMEGGGEIVLPIAEIDGMAEQENEDLIEKIGREEEEEGAEE 234
>GAS7_RAT (O55148) Growth-arrest-specific protein 7 (GAS-7)| Length = 422 Score = 28.5 bits (62), Expect = 4.6 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = +1 Query: 112 LAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 279 L R +++ +K D IAD + LGES A+ R + E +QL+ Sbjct: 249 LMNFRENFKKDMKKCDHHIADLRKQLGESRYASVEKARKALTERQKDLEMKTQQLE 304
>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) Length = 4903 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 Query: 117 REQRRVHLQHAVGRQRLVQRRHVMGFHC 34 +E++RV L V RQR +Q+R M HC Sbjct: 3404 QERQRVQLMQEVDRQRALQQRMEMEQHC 3431
>IF2P_SCHPO (Q10251) Eukaryotic translation initiation factor 5B (eIF-5B)| (Translation initiation factor IF-2) Length = 1079 Score = 28.5 bits (62), Expect = 4.6 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = +1 Query: 109 LLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEK 261 +L E R R EEE R +E+ AEE +EV EA ++ R+ +KEK Sbjct: 253 MLEEKRAREEEEQRIREEEARIAEEEKRLAEVEEARKEEA----RLKKKEK 299
>EFG_PSYAR (Q4FQG5) Elongation factor G (EF-G)| Length = 708 Score = 28.1 bits (61), Expect = 6.1 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = +1 Query: 7 VGLRDDVLAAVKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEEN 186 +G DD V M A+Y A+ G+ + + AE++ + EE E A+A E Sbjct: 173 IGKEDDFEGVVDLITMKAIYWDEASQGMEYDEREIPAELQEKAEEYREYLVENAAEATEE 232 Query: 187 L 189 L Sbjct: 233 L 233
>AMPA_BACCR (Q816E3) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 494 Score = 28.1 bits (61), Expect = 6.1 Identities = 20/77 (25%), Positives = 37/77 (48%) Frame = +1 Query: 28 LAAVKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVR 207 LA ++ +A E + V E+D A +++ +EE+ +K +LG++ V Sbjct: 8 LAGHEAVIVALFEEEKMSSFVQELDKAFEGQLQVLLEEKELSTKKKAISKVHSLGKTNV- 66 Query: 208 EAHLAKSLYFIRVGEKE 258 K YF+ +G+KE Sbjct: 67 -----KRYYFVGLGKKE 78
>AMPA_BACC1 (Q72YG1) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 494 Score = 28.1 bits (61), Expect = 6.1 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = +1 Query: 52 MAALYESLAADGVLEMDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSL 231 +A E + V E+D A +++ +EE+ +K +LG++ V K Sbjct: 16 VALFEEEKTSSFVKELDKAFEGQLQVLLEEKELSTKKKAISKVHSLGKTNV------KRY 69 Query: 232 YFIRVGEKE 258 YF+ +G+KE Sbjct: 70 YFVGLGKKE 78
>UVH3_ARATH (Q9ATY5) DNA-repair protein UVH3 (EC 3.1.-.-) (UV hypersensitive| protein 3) (XPG homolog) (ERCC5 homolog) (RAD2 homolog) (AtUVH3) (AtXPG) (AtRAD2) Length = 1479 Score = 27.7 bits (60), Expect = 7.9 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +1 Query: 97 MDAALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKA 264 M LLA+MR ++ E R+ +K+ A E E ++ EA+L + + E +++ Sbjct: 291 MQLDLLAQMREKLMAENRQKYQKVKKAPEKFSELQI-EAYLKTVAFRREINEVQRS 345
>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein| p162) (Zinc finger FYVE domain-containing protein 2) Length = 1411 Score = 27.7 bits (60), Expect = 7.9 Identities = 11/40 (27%), Positives = 24/40 (60%) Frame = +1 Query: 112 LAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSL 231 L E GR++E+ + EK+ D E+ + + +++ + L + L Sbjct: 430 LGEAHGRLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQL 469
>SYFB_BACCR (Q817I7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 806 Score = 27.7 bits (60), Expect = 7.9 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Frame = +1 Query: 16 RDDVLAAVKSHDMAALYESLA-ADGVLEMDAALLAEMRGRIEEETRK---FDEKIADAEE 183 RD + K + + +A A G L D L G EE +K F DAE Sbjct: 719 RDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEEGKKSLAFSMTYFDAER 778 Query: 184 NLGESEVREAH 216 L + EV EAH Sbjct: 779 TLTDEEVTEAH 789
>TPM_HALDV (Q9GZ71) Tropomyosin| Length = 284 Score = 27.7 bits (60), Expect = 7.9 Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 8/75 (10%) Frame = +1 Query: 70 SLAADGVLEMDAALLAEMRGRIEEETRKFDE---KIADAEENLGESEVR-EAHLAKSLYF 237 SLA D ++ A L E + E+ RK+DE K+A E +L +E R EA AK L Sbjct: 134 SLADDERIDQLEAQLKEAKYIAEDAERKYDEAARKLAITEVDLERAEARLEAAEAKILEL 193 Query: 238 IR----VGEKEKALE 270 VG K+LE Sbjct: 194 EEELKVVGNNMKSLE 208
>AMIB_PSEAE (Q51416) ATP-dependent protease ATP-binding subunit-like protein| amiB Length = 371 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 133 IEEETRKFDEKIADAEENLGESEVREAHLA 222 +++ R+ DE+ A A ENL E+ + +AHL+ Sbjct: 8 LDQSRRQQDEEQALARENLAEASLLQAHLS 37
>CDC6_PYRKO (Q5JET2) Cell division control protein 6 homolog (CDC6 homolog)| Length = 415 Score = 27.7 bits (60), Expect = 7.9 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 2/90 (2%) Frame = +1 Query: 13 LRDDVLAAVKSHDMAALYESLAADGVLEMDAALLAEMRGRIEEETRKFD--EKIADAEEN 186 LRD ++ K A YE + D V+ + AAL A G + R D + E Sbjct: 222 LRDILMQRAKE----AFYEGVLDDAVVPLCAALAAREHG---DARRALDLLRVAGEIAER 274 Query: 187 LGESEVREAHLAKSLYFIRVGEKEKALEQL 276 G S+V E H+ K+ I E+ ++ L Sbjct: 275 EGASKVTERHVWKAQEKIEQDTMEEVIKTL 304
>GREA_RHILO (Q98I49) Transcription elongation factor greA (Transcript cleavage| factor greA) Length = 157 Score = 27.7 bits (60), Expect = 7.9 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +1 Query: 103 AALLAEMRGRIEEETRKFDEKIADAEENLGESEVREAHLAKSLYFIRVG 249 A+L E+R R +EE + E I++A + SE E H AK + G Sbjct: 12 ASLKEELRWRQQEERPRIIEAISEARSHGDLSENAEYHAAKEAQSLNEG 60 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.131 0.336 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,732,625 Number of Sequences: 219361 Number of extensions: 416128 Number of successful extensions: 1729 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 1688 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1728 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
