ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart49a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482784.1| Oryza sativa (japonica cultivar-group), mRNA 228 5e-57
2ref|XM_507257.1| PREDICTED Oryza sativa (japonica cultivar-group... 228 5e-57
3dbj|AK104843.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 5e-57
4dbj|AK071203.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 5e-57
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 170 1e-39
6dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic D... 170 1e-39
7dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic D... 170 1e-39
8gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7... 161 1e-36
9gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8... 145 6e-32
10gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3... 60 3e-06
11gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2... 58 1e-05
12gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1... 58 1e-05
13gb|AY108052.1| Zea mays PCO079165 mRNA sequence 58 1e-05
14ref|NM_201702.1| Arabidopsis thaliana OPR3; 12-oxophytodienoate ... 48 0.011
15ref|NM_126619.2| Arabidopsis thaliana OPR3; 12-oxophytodienoate ... 48 0.011
16emb|AJ238149.1|ATH238149 Arabidopsis thaliana mRNA for 12-oxo-ph... 48 0.011
17gb|AY097367.1| Arabidopsis thaliana At2g06050/F5K7.19 mRNA, comp... 48 0.011
18gb|AC006413.4| Arabidopsis thaliana chromosome 2 clone F5K7 map ... 48 0.011
19gb|AF410322.1|AF410322 Arabidopsis thaliana At2g06050/F5K7.19 mR... 48 0.011
20gb|AF370582.1|AF370582 Arabidopsis thaliana 12-oxophytodienoate-... 48 0.011
21emb|BX820381.1|CNS0A9HJ Arabidopsis thaliana Full-length cDNA Co... 48 0.011
22emb|BX819897.1|CNS0A9ET Arabidopsis thaliana Full-length cDNA Co... 48 0.011
23gb|AF132212.1|AF132212 Arabidopsis thaliana OPDA-reductase homol... 48 0.011
24gb|AF293653.1|AF293653 Arabidopsis thaliana 12-oxo-phytodienoate... 48 0.011
25gb|AF218257.1|AF218257 Arabidopsis thaliana 12-oxo-phytodienoate... 48 0.011
26gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4... 46 0.042
27dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.042
28gb|DQ004685.1| Hevea brasiliensis 12-oxophytodienoate reductase ... 46 0.042
29dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.042
30dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.042
31dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.042
32dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.042
33dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.042
34gb|AY921643.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR6... 44 0.16
35gb|AE005885.1| Caulobacter crescentus CB15 section 211 of 359 of... 44 0.16
36gb|AY106849.1| Zea mays PCO134627 mRNA sequence 44 0.16
37gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 0.65
38gb|AE005721.1| Caulobacter crescentus CB15 section 47 of 359 of ... 40 2.6
39gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 2.6
40dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.6
41gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 40 2.6 
>ref|XM_482784.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1531

 Score =  228 bits (115), Expect = 5e-57
 Identities = 151/163 (92%)
 Strand = Plus / Plus

                                                                       
Query: 41  cgctcttctcgccgtaccagatgcgccgcttcagcctcgcccaccgggtggtgctggcgc 100
           |||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||
Sbjct: 165 cgctcttctcgccgtaccagatgccccgcttccgcctcaaccaccgggtggtgctggcgc 224

                                                                       
Query: 101 cgatgacgaggtgcagggccatcggcgggctgccggggccggcgctagcggagtactacg 160
           |||||||| |||||||||| ||||||||| |||| || |||||||| |||||||||||||
Sbjct: 225 cgatgacgcggtgcagggcgatcggcggggtgcccggcccggcgctggcggagtactacg 284

                                                      
Query: 161 cgcagcgggccacccagggaggcctgctcatctccgagggcac 203
           |||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 285 cgcagcggaccacccagggtggcctgctcatctccgagggcac 327
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>ref|XM_507257.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.35 mRNA
          Length = 1560

 Score =  228 bits (115), Expect = 5e-57
 Identities = 151/163 (92%)
 Strand = Plus / Plus

                                                                       
Query: 41  cgctcttctcgccgtaccagatgcgccgcttcagcctcgcccaccgggtggtgctggcgc 100
           |||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||
Sbjct: 180 cgctcttctcgccgtaccagatgccccgcttccgcctcaaccaccgggtggtgctggcgc 239

                                                                       
Query: 101 cgatgacgaggtgcagggccatcggcgggctgccggggccggcgctagcggagtactacg 160
           |||||||| |||||||||| ||||||||| |||| || |||||||| |||||||||||||
Sbjct: 240 cgatgacgcggtgcagggcgatcggcggggtgcccggcccggcgctggcggagtactacg 299

                                                      
Query: 161 cgcagcgggccacccagggaggcctgctcatctccgagggcac 203
           |||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 300 cgcagcggaccacccagggtggcctgctcatctccgagggcac 342
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>dbj|AK104843.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G07, full
           insert sequence
          Length = 1531

 Score =  228 bits (115), Expect = 5e-57
 Identities = 151/163 (92%)
 Strand = Plus / Plus

                                                                       
Query: 41  cgctcttctcgccgtaccagatgcgccgcttcagcctcgcccaccgggtggtgctggcgc 100
           |||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||
Sbjct: 165 cgctcttctcgccgtaccagatgccccgcttccgcctcaaccaccgggtggtgctggcgc 224

                                                                       
Query: 101 cgatgacgaggtgcagggccatcggcgggctgccggggccggcgctagcggagtactacg 160
           |||||||| |||||||||| ||||||||| |||| || |||||||| |||||||||||||
Sbjct: 225 cgatgacgcggtgcagggcgatcggcggggtgcccggcccggcgctggcggagtactacg 284

                                                      
Query: 161 cgcagcgggccacccagggaggcctgctcatctccgagggcac 203
           |||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 285 cgcagcggaccacccagggtggcctgctcatctccgagggcac 327
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>dbj|AK071203.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083E07, full
           insert sequence
          Length = 1560

 Score =  228 bits (115), Expect = 5e-57
 Identities = 151/163 (92%)
 Strand = Plus / Plus

                                                                       
Query: 41  cgctcttctcgccgtaccagatgcgccgcttcagcctcgcccaccgggtggtgctggcgc 100
           |||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||
Sbjct: 180 cgctcttctcgccgtaccagatgccccgcttccgcctcaaccaccgggtggtgctggcgc 239

                                                                       
Query: 101 cgatgacgaggtgcagggccatcggcgggctgccggggccggcgctagcggagtactacg 160
           |||||||| |||||||||| ||||||||| |||| || |||||||| |||||||||||||
Sbjct: 240 cgatgacgcggtgcagggcgatcggcggggtgcccggcccggcgctggcggagtactacg 299

                                                      
Query: 161 cgcagcgggccacccagggaggcctgctcatctccgagggcac 203
           |||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 300 cgcagcggaccacccagggtggcctgctcatctccgagggcac 342
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  170 bits (86), Expect = 1e-39
 Identities = 110/118 (93%)
 Strand = Plus / Plus

                                                                            
Query: 86       gggtggtgctggcgccgatgacgaggtgcagggccatcggcgggctgccggggccggcgc 145
                ||||||||||||||||||||||| |||||||||| ||||||||| |||| || |||||||
Sbjct: 22540279 gggtggtgctggcgccgatgacgcggtgcagggcgatcggcggggtgcccggcccggcgc 22540338

                                                                          
Query: 146      tagcggagtactacgcgcagcgggccacccagggaggcctgctcatctccgagggcac 203
                | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 22540339 tggcggagtactacgcgcagcggaccacccagggtggcctgctcatctccgagggcac 22540396



 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 41       cgctcttctcgccgtaccagatgcgccgcttcagcctcgcccaccgg 87
                |||||||||||||||||||||||| ||||||| |||||  |||||||
Sbjct: 22540121 cgctcttctcgccgtaccagatgccccgcttccgcctcaaccaccgg 22540167
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>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0690E03
          Length = 139924

 Score =  170 bits (86), Expect = 1e-39
 Identities = 110/118 (93%)
 Strand = Plus / Plus

                                                                         
Query: 86    gggtggtgctggcgccgatgacgaggtgcagggccatcggcgggctgccggggccggcgc 145
             ||||||||||||||||||||||| |||||||||| ||||||||| |||| || |||||||
Sbjct: 13780 gggtggtgctggcgccgatgacgcggtgcagggcgatcggcggggtgcccggcccggcgc 13839

                                                                       
Query: 146   tagcggagtactacgcgcagcgggccacccagggaggcctgctcatctccgagggcac 203
             | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 13840 tggcggagtactacgcgcagcggaccacccagggtggcctgctcatctccgagggcac 13897



 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 41    cgctcttctcgccgtaccagatgcgccgcttcagcctcgcccaccgg 87
             |||||||||||||||||||||||| ||||||| |||||  |||||||
Sbjct: 13622 cgctcttctcgccgtaccagatgccccgcttccgcctcaaccaccgg 13668
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>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0493A04
          Length = 149367

 Score =  170 bits (86), Expect = 1e-39
 Identities = 110/118 (93%)
 Strand = Plus / Plus

                                                                          
Query: 86     gggtggtgctggcgccgatgacgaggtgcagggccatcggcgggctgccggggccggcgc 145
              ||||||||||||||||||||||| |||||||||| ||||||||| |||| || |||||||
Sbjct: 135207 gggtggtgctggcgccgatgacgcggtgcagggcgatcggcggggtgcccggcccggcgc 135266

                                                                        
Query: 146    tagcggagtactacgcgcagcgggccacccagggaggcctgctcatctccgagggcac 203
              | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 135267 tggcggagtactacgcgcagcggaccacccagggtggcctgctcatctccgagggcac 135324



 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                             
Query: 41     cgctcttctcgccgtaccagatgcgccgcttcagcctcgcccaccgg 87
              |||||||||||||||||||||||| ||||||| |||||  |||||||
Sbjct: 135049 cgctcttctcgccgtaccagatgccccgcttccgcctcaaccaccgg 135095
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>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete
           cds
          Length = 1594

 Score =  161 bits (81), Expect = 1e-36
 Identities = 141/161 (87%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcttctcgccgtaccagatgcgccgcttcagcctcgcccaccgggtggtgctggcgccg 102
           |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 294 ctcttctcgccgtaccagatgccccgcttccgcctcgcccaccgggtggtgctggcgccg 353

                                                                       
Query: 103 atgacgaggtgcagggccatcggcgggctgccggggccggcgctagcggagtactacgcg 162
           ||||| |||||||||||   || || | | || || || ||||| |||||||||||||||
Sbjct: 354 atgaccaggtgcagggcgcccgacgcggtcccaggccccgcgctcgcggagtactacgcg 413

                                                    
Query: 163 cagcgggccacccagggaggcctgctcatctccgagggcac 203
           |||||| ||||  | || ||| |||||||||||||||||||
Sbjct: 414 cagcggtccacggacggcggcttgctcatctccgagggcac 454
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>gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8) mRNA, complete
           cds
          Length = 1529

 Score =  145 bits (73), Expect = 6e-32
 Identities = 139/161 (86%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcttctcgccgtaccagatgcgccgcttcagcctcgcccaccgggtggtgctggcgccg 102
           |||||||||||||||||||||| || |||| ||||||| |||||||||||||||||||||
Sbjct: 158 ctcttctcgccgtaccagatgccccacttccgcctcgcgcaccgggtggtgctggcgccg 217

                                                                       
Query: 103 atgacgaggtgcagggccatcggcgggctgccggggccggcgctagcggagtactacgcg 162
           ||||| |||||| ||||   ||  | ||| ||||| || ||||| |||||||||||||||
Sbjct: 218 atgaccaggtgccgggcgcccgatgcgctcccgggccccgcgctcgcggagtactacgcg 277

                                                    
Query: 163 cagcgggccacccagggaggcctgctcatctccgagggcac 203
           |||||| ||||  | || ||| |||||||||||||||||||
Sbjct: 278 cagcggtccacggaaggcggcttgctcatctccgagggcac 318
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>gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3) mRNA, complete
           cds
          Length = 1431

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 80  cccaccgggtggtgctggcgccgatgacgaggtgcagggccatcgg 125
           ||||||| ||||||||||||||||||||| ||||| | ||||||||
Sbjct: 138 cccaccgcgtggtgctggcgccgatgacgcggtgccgcgccatcgg 183
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>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete
           cds
          Length = 1409

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 82  caccgggtggtgctggcgccgatgacgaggtgc 114
           ||||||||||||||||||||| |||||||||||
Sbjct: 158 caccgggtggtgctggcgccgctgacgaggtgc 190



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 153 gtactacgcgcagcgggccacccagggaggcctgctcatc 192
           ||||||| ||||||| ||||||  ||| ||||||||||||
Sbjct: 229 gtactactcgcagcgcgccaccaggggtggcctgctcatc 268
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>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete
           cds
          Length = 1465

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 82  caccgggtggtgctggcgccgatgacgaggtgc 114
           ||||||||||||||||||||| |||||||||||
Sbjct: 173 caccgggtggtgctggcgccgctgacgaggtgc 205
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>gb|AY108052.1| Zea mays PCO079165 mRNA sequence
          Length = 1489

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 82  caccgggtggtgctggcgccgatgacgaggtgc 114
           ||||||||||||||||||||| |||||||||||
Sbjct: 195 caccgggtggtgctggcgccgctgacgaggtgc 227
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>ref|NM_201702.1| Arabidopsis thaliana OPR3; 12-oxophytodienoate reductase AT2G06050
           (OPR3) transcript variant AT2G06050.2 mRNA, complete cds
          Length = 1457

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  gtggtgctggcgccgatgacgaggtgcagggc 119
           ||||| ||||||||||||||| ||||||||||
Sbjct: 235 gtggttctggcgccgatgacgcggtgcagggc 266
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>ref|NM_126619.2| Arabidopsis thaliana OPR3; 12-oxophytodienoate reductase AT2G06050
           (OPR3) transcript variant AT2G06050.1 mRNA, complete cds
          Length = 1367

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  gtggtgctggcgccgatgacgaggtgcagggc 119
           ||||| ||||||||||||||| ||||||||||
Sbjct: 144 gtggttctggcgccgatgacgcggtgcagggc 175
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>emb|AJ238149.1|ATH238149 Arabidopsis thaliana mRNA for 12-oxo-phytodienoate reductase
          Length = 1346

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  gtggtgctggcgccgatgacgaggtgcagggc 119
           ||||| ||||||||||||||| ||||||||||
Sbjct: 144 gtggttctggcgccgatgacgcggtgcagggc 175
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>gb|AY097367.1| Arabidopsis thaliana At2g06050/F5K7.19 mRNA, complete cds
          Length = 1176

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  gtggtgctggcgccgatgacgaggtgcagggc 119
           ||||| ||||||||||||||| ||||||||||
Sbjct: 79  gtggttctggcgccgatgacgcggtgcagggc 110
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>gb|AC006413.4| Arabidopsis thaliana chromosome 2 clone F5K7 map ve013, complete
             sequence
          Length = 106716

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 88    gtggtgctggcgccgatgacgaggtgcagggc 119
             ||||| ||||||||||||||| ||||||||||
Sbjct: 79807 gtggttctggcgccgatgacgcggtgcagggc 79838
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>gb|AF410322.1|AF410322 Arabidopsis thaliana At2g06050/F5K7.19 mRNA, complete cds
          Length = 1348

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  gtggtgctggcgccgatgacgaggtgcagggc 119
           ||||| ||||||||||||||| ||||||||||
Sbjct: 124 gtggttctggcgccgatgacgcggtgcagggc 155
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>gb|AF370582.1|AF370582 Arabidopsis thaliana 12-oxophytodienoate-10,11-reductase
           (At2g06050; F5K7.19) mRNA, complete cds
          Length = 1176

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  gtggtgctggcgccgatgacgaggtgcagggc 119
           ||||| ||||||||||||||| ||||||||||
Sbjct: 79  gtggttctggcgccgatgacgcggtgcagggc 110
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>emb|BX820381.1|CNS0A9HJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH28ZB06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1401

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  gtggtgctggcgccgatgacgaggtgcagggc 119
           ||||| ||||||||||||||| ||||||||||
Sbjct: 235 gtggttctggcgccgatgacgcggtgcagggc 266
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>emb|BX819897.1|CNS0A9ET Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS44ZG02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1282

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  gtggtgctggcgccgatgacgaggtgcagggc 119
           ||||| ||||||||||||||| ||||||||||
Sbjct: 116 gtggttctggcgccgatgacgcggtgcagggc 147
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>gb|AF132212.1|AF132212 Arabidopsis thaliana OPDA-reductase homolog mRNA, complete cds
          Length = 1351

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  gtggtgctggcgccgatgacgaggtgcagggc 119
           ||||| ||||||||||||||| ||||||||||
Sbjct: 131 gtggttctggcgccgatgacgcggtgcagggc 162
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>gb|AF293653.1|AF293653 Arabidopsis thaliana 12-oxo-phytodienoate reductase (OPR3) mRNA,
           complete cds
          Length = 1176

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 88  gtggtgctggcgccgatgacgaggtgcagggc 119
           ||||| ||||||||||||||| ||||||||||
Sbjct: 79  gtggttctggcgccgatgacgcggtgcagggc 110
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>gb|AF218257.1|AF218257 Arabidopsis thaliana 12-oxo-phytodienoate reductase gene, complete
            cds
          Length = 18202

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 88   gtggtgctggcgccgatgacgaggtgcagggc 119
            ||||| ||||||||||||||| ||||||||||
Sbjct: 9964 gtggttctggcgccgatgacgcggtgcagggc 9995
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>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete
           cds
          Length = 1833

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 154 tactacgcgcagcgggccacccagggaggcctgctcatc 192
           |||||||||||||| ||||||| ||| ||||| ||||||
Sbjct: 790 tactacgcgcagcgcgccacccggggcggcctcctcatc 828
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 80      cccaccgggtggtgctggcgccgatgacgaggtgc 114
               |||||||||||||||| |||||| ||||| |||||
Sbjct: 5925032 cccaccgggtggtgctcgcgccgctgacgcggtgc 5924998



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 75      cctcgcccaccgggtggtgctggcgccgatgacgaggtgc 114
               |||| ||||||| ||| |||| |||||||||||| |||||
Sbjct: 5891132 cctctcccaccgtgtgctgctcgcgccgatgacgcggtgc 5891093
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>gb|DQ004685.1| Hevea brasiliensis 12-oxophytodienoate reductase (opr) mRNA,
           complete cds
          Length = 1455

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 70  ttcagcctcgcccaccgggtggtgctggcgccgatgacgaggtgcag 116
           ||||||||| ||||| ||||||||||||| || ||||| || |||||
Sbjct: 173 ttcagcctctcccacagggtggtgctggctcccatgactagatgcag 219
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>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0024N18
          Length = 128739

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 80    cccaccgggtggtgctggcgccgatgacgaggtgc 114
             |||||||||||||||| |||||| ||||| |||||
Sbjct: 46684 cccaccgggtggtgctcgcgccgctgacgcggtgc 46650



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 75    cctcgcccaccgggtggtgctggcgccgatgacgaggtgc 114
             |||| ||||||| ||| |||| |||||||||||| |||||
Sbjct: 12784 cctctcccaccgtgtgctgctcgcgccgatgacgcggtgc 12745
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0537F07
          Length = 147724

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 80     cccaccgggtggtgctggcgccgatgacgaggtgc 114
              |||||||||||||||| |||||| ||||| |||||
Sbjct: 125807 cccaccgggtggtgctcgcgccgctgacgcggtgc 125773



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 75    cctcgcccaccgggtggtgctggcgccgatgacgaggtgc 114
             |||| ||||||| ||| |||| |||||||||||| |||||
Sbjct: 91907 cctctcccaccgtgtgctgctcgcgccgatgacgcggtgc 91868
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>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full
           insert sequence
          Length = 1281

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 80  cccaccgggtggtgctggcgccgatgacgaggtgc 114
           ||||||||||||||||  ||||||||||| |||||
Sbjct: 162 cccaccgggtggtgctctcgccgatgacgcggtgc 196
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>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full
           insert sequence
          Length = 1281

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 80  cccaccgggtggtgctggcgccgatgacgaggtgc 114
           ||||||||||||||||  ||||||||||| |||||
Sbjct: 162 cccaccgggtggtgctctcgccgatgacgcggtgc 196
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>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full
           insert sequence
          Length = 1422

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 80  cccaccgggtggtgctggcgccgatgacgaggtgc 114
           ||||||||||||||||  ||||||||||| |||||
Sbjct: 157 cccaccgggtggtgctctcgccgatgacgcggtgc 191
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>gb|AY921643.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR6) mRNA, complete
           cds
          Length = 1267

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 86  gggtggtgctggcgccgatgacgaggtgcagggc 119
           |||| |||||||||||| ||||||||||| ||||
Sbjct: 103 gggttgtgctggcgccgctgacgaggtgccgggc 136
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>gb|AE005885.1| Caulobacter crescentus CB15 section 211 of 359 of the complete genome
          Length = 11024

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 83   accgggtggtgctggcgccgatgacg 108
            ||||||||||| ||||||||||||||
Sbjct: 8768 accgggtggtgatggcgccgatgacg 8743
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>gb|AY106849.1| Zea mays PCO134627 mRNA sequence
          Length = 1274

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 86  gggtggtgctggcgccgatgacgaggtgcagggc 119
           |||| |||||||||||| ||||||||||| ||||
Sbjct: 110 gggttgtgctggcgccgctgacgaggtgccgggc 143
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 12     ggatcggccggcgccggacca 32
              |||||||||||||||||||||
Sbjct: 791681 ggatcggccggcgccggacca 791661



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    cgggctgccggggccggcgc 145
              ||||||||||||||||||||
Sbjct: 851838 cgggctgccggggccggcgc 851857
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>gb|AE005721.1| Caulobacter crescentus CB15 section 47 of 359 of the complete genome
          Length = 12858

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   accgggtggtgctggcgccg 102
            ||||||||||||||||||||
Sbjct: 3253 accgggtggtgctggcgccg 3272
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 85      cgggtggtgctggcgccgat 104
               ||||||||||||||||||||
Sbjct: 3452739 cgggtggtgctggcgccgat 3452720
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>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full
           insert sequence
          Length = 1517

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 75  cctcgcccaccgggtggtgctggcgccgatgacgaggtgc 114
           |||| ||||||| ||| |||| |||||||||||| |||||
Sbjct: 235 cctctcccaccgtgtgctgctcgcgccgatgacgcggtgc 274
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 123    cggcgggctgccggggccggcgct 146
              ||||||||||| ||||||||||||
Sbjct: 171117 cggcgggctgctggggccggcgct 171094


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,132,154
Number of Sequences: 3902068
Number of extensions: 1132154
Number of successful extensions: 86962
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86335
Number of HSP's gapped (non-prelim): 626
length of query: 203
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 181
effective length of database: 17,147,199,772
effective search space: 3103643158732
effective search space used: 3103643158732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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