ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart48d07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189610.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1581 Score = 694 bits (350), Expect = 0.0 Identities = 484/528 (91%), Gaps = 3/528 (0%) Strand = Plus / Plus Query: 71 gagcttcaaggtgacgcggatctcggagggcgcggtgaagccggcgtcggtgacgcccga 130 |||||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||| || Sbjct: 85 gagcttcaaggtgacgaggatctcggagggggcggtgaagccggcggcggcgacgccgga 144 Query: 131 ccacacgctgccgctggcgtgggtggaccggtacccgacccaccgcggcctggtggagtc 190 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 145 ggagacgctgccgctggcgtgggtggaccggtacccgacccaccgcgggctggtggagtc 204 Query: 191 gatgcacatcttccggtccggcgccgacgcggcccccggcgtgatccgcgaggcgctggg 250 |||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| | Sbjct: 205 gatgcacatcttccggtcgggcgccgacgcggccccgggcgtcatccgcgacgcgctcgc 264 Query: 251 caaggcgctggccttcttctacccgctggcggggcgcatcgtggagcagccggagaaggg 310 || |||||||| ||||||||||||||| || |||||||||||||||| | ||| || Sbjct: 265 cagggcgctggtcttcttctacccgctcgccgggcgcatcgtggagc---ccgaggccgg 321 Query: 311 gtgccccgccatccgctgcaccgccgacggcgtctacttcgcggaggccgtcgccgagtg 370 || |||||||||||| |||||||||||||||||||||||||| ||||||| |||||| || Sbjct: 322 gtcccccgccatccggtgcaccgccgacggcgtctacttcgccgaggccgccgccgactg 381 Query: 371 cagcctggaggacgtccggttcctggagcgccccctgctgctccccaaggaggacctcgt 430 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 382 cagcctggaggacgtccgcttcctggagcgccccctcctcctccccaaggaggacctcgt 441 Query: 431 cccctaccccgccgccgacctctgggccgtcgagccccacaacaccatcatgatgatgca 490 ||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 442 cccctaccccggcgacgaccgctggggcgtcgagccccacaacaccatcatgatgatgca 501 Query: 491 gatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgcgtcggc 550 |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 502 gatcaccaaattcacctgcggcgggttcgtgatggggctccggttcaaccacgcgtcggc 561 Query: 551 ggacggcatgggcgcggcgcagttcatcaaggcggtcggcgacatggc 598 |||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 562 ggacggcatgggcgcggctcagttcatcaacgcggtgggcgacatggc 609
>dbj|AK120744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G13, full insert sequence Length = 1951 Score = 694 bits (350), Expect = 0.0 Identities = 484/528 (91%), Gaps = 3/528 (0%) Strand = Plus / Plus Query: 71 gagcttcaaggtgacgcggatctcggagggcgcggtgaagccggcgtcggtgacgcccga 130 |||||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||| || Sbjct: 87 gagcttcaaggtgacgaggatctcggagggggcggtgaagccggcggcggcgacgccgga 146 Query: 131 ccacacgctgccgctggcgtgggtggaccggtacccgacccaccgcggcctggtggagtc 190 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 147 ggagacgctgccgctggcgtgggtggaccggtacccgacccaccgcgggctggtggagtc 206 Query: 191 gatgcacatcttccggtccggcgccgacgcggcccccggcgtgatccgcgaggcgctggg 250 |||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| | Sbjct: 207 gatgcacatcttccggtcgggcgccgacgcggccccgggcgtcatccgcgacgcgctcgc 266 Query: 251 caaggcgctggccttcttctacccgctggcggggcgcatcgtggagcagccggagaaggg 310 || |||||||| ||||||||||||||| || |||||||||||||||| | ||| || Sbjct: 267 cagggcgctggtcttcttctacccgctcgccgggcgcatcgtggagc---ccgaggccgg 323 Query: 311 gtgccccgccatccgctgcaccgccgacggcgtctacttcgcggaggccgtcgccgagtg 370 || |||||||||||| |||||||||||||||||||||||||| ||||||| |||||| || Sbjct: 324 gtcccccgccatccggtgcaccgccgacggcgtctacttcgccgaggccgccgccgactg 383 Query: 371 cagcctggaggacgtccggttcctggagcgccccctgctgctccccaaggaggacctcgt 430 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 384 cagcctggaggacgtccgcttcctggagcgccccctcctcctccccaaggaggacctcgt 443 Query: 431 cccctaccccgccgccgacctctgggccgtcgagccccacaacaccatcatgatgatgca 490 ||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 444 cccctaccccggcgacgaccgctggggcgtcgagccccacaacaccatcatgatgatgca 503 Query: 491 gatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgcgtcggc 550 |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 504 gatcaccaaattcacctgcggcgggttcgtgatggggctccggttcaaccacgcgtcggc 563 Query: 551 ggacggcatgggcgcggcgcagttcatcaaggcggtcggcgacatggc 598 |||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 564 ggacggcatgggcgcggctcagttcatcaacgcggtgggcgacatggc 611
>dbj|AK098922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002O23, full insert sequence Length = 1581 Score = 694 bits (350), Expect = 0.0 Identities = 484/528 (91%), Gaps = 3/528 (0%) Strand = Plus / Plus Query: 71 gagcttcaaggtgacgcggatctcggagggcgcggtgaagccggcgtcggtgacgcccga 130 |||||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||| || Sbjct: 85 gagcttcaaggtgacgaggatctcggagggggcggtgaagccggcggcggcgacgccgga 144 Query: 131 ccacacgctgccgctggcgtgggtggaccggtacccgacccaccgcggcctggtggagtc 190 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 145 ggagacgctgccgctggcgtgggtggaccggtacccgacccaccgcgggctggtggagtc 204 Query: 191 gatgcacatcttccggtccggcgccgacgcggcccccggcgtgatccgcgaggcgctggg 250 |||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| | Sbjct: 205 gatgcacatcttccggtcgggcgccgacgcggccccgggcgtcatccgcgacgcgctcgc 264 Query: 251 caaggcgctggccttcttctacccgctggcggggcgcatcgtggagcagccggagaaggg 310 || |||||||| ||||||||||||||| || |||||||||||||||| | ||| || Sbjct: 265 cagggcgctggtcttcttctacccgctcgccgggcgcatcgtggagc---ccgaggccgg 321 Query: 311 gtgccccgccatccgctgcaccgccgacggcgtctacttcgcggaggccgtcgccgagtg 370 || |||||||||||| |||||||||||||||||||||||||| ||||||| |||||| || Sbjct: 322 gtcccccgccatccggtgcaccgccgacggcgtctacttcgccgaggccgccgccgactg 381 Query: 371 cagcctggaggacgtccggttcctggagcgccccctgctgctccccaaggaggacctcgt 430 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 382 cagcctggaggacgtccgcttcctggagcgccccctcctcctccccaaggaggacctcgt 441 Query: 431 cccctaccccgccgccgacctctgggccgtcgagccccacaacaccatcatgatgatgca 490 ||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 442 cccctaccccggcgacgaccgctggggcgtcgagccccacaacaccatcatgatgatgca 501 Query: 491 gatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgcgtcggc 550 |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 502 gatcaccaaattcacctgcggcgggttcgtgatggggctccggttcaaccacgcgtcggc 561 Query: 551 ggacggcatgggcgcggcgcagttcatcaaggcggtcggcgacatggc 598 |||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 562 ggacggcatgggcgcggctcagttcatcaacgcggtgggcgacatggc 609
>dbj|AK065131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P14, full insert sequence Length = 1593 Score = 686 bits (346), Expect = 0.0 Identities = 483/528 (91%), Gaps = 3/528 (0%) Strand = Plus / Plus Query: 71 gagcttcaaggtgacgcggatctcggagggcgcggtgaagccggcgtcggtgacgcccga 130 |||||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||| || Sbjct: 88 gagcttcaaggtgacgaggatctcggagggggcggtgaagccggcggcggcgacgccgga 147 Query: 131 ccacacgctgccgctggcgtgggtggaccggtacccgacccaccgcggcctggtggagtc 190 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 148 ggagacgctgccgctggcgtgggtggaccggtacccgacccaccgcgggctggtggagtc 207 Query: 191 gatgcacatcttccggtccggcgccgacgcggcccccggcgtgatccgcgaggcgctggg 250 |||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| | Sbjct: 208 gatgcacatcttccggtcgggcgccgacgcggccccgggcgtcatccgcgacgcgctcgc 267 Query: 251 caaggcgctggccttcttctacccgctggcggggcgcatcgtggagcagccggagaaggg 310 || |||||||| ||||||||||||||| || |||||||||||||||| | ||| || Sbjct: 268 cagggcgctggtcttcttctacccgctcgccgggcgcatcgtggagc---ccgaggccgg 324 Query: 311 gtgccccgccatccgctgcaccgccgacggcgtctacttcgcggaggccgtcgccgagtg 370 || |||||||||||| |||||||||||||||||||||||||| ||||||| |||||| || Sbjct: 325 gtcccccgccatccggtgcaccgccgacggcgtctacttcgccgaggccgccgccgactg 384 Query: 371 cagcctggaggacgtccggttcctggagcgccccctgctgctccccaaggaggacctcgt 430 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 385 cagcctggaggacgtccgcttcctggagcgccccctcctcctccccaaggaggacctcgt 444 Query: 431 cccctaccccgccgccgacctctgggccgtcgagccccacaacaccatcatgatgatgca 490 ||||||||||| || ||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 445 cccctaccccggcgacgaccgcaggggcgtcgagccccacaacaccatcatgatgatgca 504 Query: 491 gatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgcgtcggc 550 |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 505 gatcaccaaattcacctgcggcgggttcgtgatggggctccggttcaaccacgcgtcggc 564 Query: 551 ggacggcatgggcgcggcgcagttcatcaaggcggtcggcgacatggc 598 |||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 565 ggacggcatgggcgcggctcagttcatcaacgcggtgggcgacatggc 612
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 529 bits (267), Expect = e-147 Identities = 383/421 (90%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 71 gagcttcaaggtgacgcggatctcggagggcgcggtgaagccggcgtcggtgacgcccga 130 |||||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||| || Sbjct: 4527323 gagcttcaaggtgacgaggatctcggagggggcggtgaagccggcggcggcgacgccgga 4527382 Query: 131 ccacacgctgccgctggcgtgggtggaccggtacccgacccaccgcggcctggtggagtc 190 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4527383 ggagacgctgccgctggcgtgggtggaccggtacccgacccaccgcgggctggtggagtc 4527442 Query: 191 gatgcacatcttccggtccggcgccgacgcggcccccggcgtgatccgcgaggcgctggg 250 |||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| | Sbjct: 4527443 gatgcacatcttccggtcgggcgccgacgcggccccgggcgtcatccgcgacgcgctcgc 4527502 Query: 251 caaggcgctggccttcttctacccgctggcggggcgcatcgtggagcagccggagaaggg 310 || |||||||| ||||||||||||||| || ||||||||||||| |||| ||| || Sbjct: 4527503 cagggcgctggtcttcttctacccgctcgccgggcgcatcgtgg---agcccgaggccgg 4527559 Query: 311 gtgccccgccatccgctgcaccgccgacggcgtctacttcgcggaggccgtcgccgagtg 370 || |||||||||||| |||||||||||||||||||||||||| ||||||| |||||| || Sbjct: 4527560 gtcccccgccatccggtgcaccgccgacggcgtctacttcgccgaggccgccgccgactg 4527619 Query: 371 cagcctggaggacgtccggttcctggagcgccccctgctgctccccaaggaggacctcgt 430 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 4527620 cagcctggaggacgtccgcttcctggagcgccccctcctcctccccaaggaggacctcgt 4527679 Query: 431 cccctaccccgccgccgacctctgggccgtcgagccccacaacaccatcatgatgatgca 490 ||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 4527680 cccctaccccggcgacgaccgctggggcgtcgagccccacaacaccatcatgatgatgca 4527739 Query: 491 g 491 | Sbjct: 4527740 g 4527740 Score = 170 bits (86), Expect = 3e-39 Identities = 104/110 (94%) Strand = Plus / Plus Query: 489 cagatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgcgtcg 548 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4530773 cagatcaccaaattcacctgcggcgggttcgtgatggggctccggttcaaccacgcgtcg 4530832 Query: 549 gcggacggcatgggcgcggcgcagttcatcaaggcggtcggcgacatggc 598 |||||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 4530833 gcggacggcatgggcgcggctcagttcatcaacgcggtgggcgacatggc 4530882 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 529 tccggttcaaccacgcgtcggcggacggcatgggcgcggcgcagttcat 577 ||||||||| ||||||| |||||||||| ||||| ||||||||||| Sbjct: 4110519 tccggttcagccacgcggtggcggacggccccggcgcagcgcagttcat 4110471 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 507 tgcggcgggttcgtgatgggcctc 530 ||||||||||||||| |||||||| Sbjct: 40502328 tgcggcgggttcgtgctgggcctc 40502351
>dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F03 Length = 149699 Score = 529 bits (267), Expect = e-147 Identities = 383/421 (90%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 71 gagcttcaaggtgacgcggatctcggagggcgcggtgaagccggcgtcggtgacgcccga 130 |||||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||| || Sbjct: 62010 gagcttcaaggtgacgaggatctcggagggggcggtgaagccggcggcggcgacgccgga 62069 Query: 131 ccacacgctgccgctggcgtgggtggaccggtacccgacccaccgcggcctggtggagtc 190 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 62070 ggagacgctgccgctggcgtgggtggaccggtacccgacccaccgcgggctggtggagtc 62129 Query: 191 gatgcacatcttccggtccggcgccgacgcggcccccggcgtgatccgcgaggcgctggg 250 |||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| | Sbjct: 62130 gatgcacatcttccggtcgggcgccgacgcggccccgggcgtcatccgcgacgcgctcgc 62189 Query: 251 caaggcgctggccttcttctacccgctggcggggcgcatcgtggagcagccggagaaggg 310 || |||||||| ||||||||||||||| || ||||||||||||| |||| ||| || Sbjct: 62190 cagggcgctggtcttcttctacccgctcgccgggcgcatcgtgg---agcccgaggccgg 62246 Query: 311 gtgccccgccatccgctgcaccgccgacggcgtctacttcgcggaggccgtcgccgagtg 370 || |||||||||||| |||||||||||||||||||||||||| ||||||| |||||| || Sbjct: 62247 gtcccccgccatccggtgcaccgccgacggcgtctacttcgccgaggccgccgccgactg 62306 Query: 371 cagcctggaggacgtccggttcctggagcgccccctgctgctccccaaggaggacctcgt 430 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 62307 cagcctggaggacgtccgcttcctggagcgccccctcctcctccccaaggaggacctcgt 62366 Query: 431 cccctaccccgccgccgacctctgggccgtcgagccccacaacaccatcatgatgatgca 490 ||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 62367 cccctaccccggcgacgaccgctggggcgtcgagccccacaacaccatcatgatgatgca 62426 Query: 491 g 491 | Sbjct: 62427 g 62427 Score = 170 bits (86), Expect = 3e-39 Identities = 104/110 (94%) Strand = Plus / Plus Query: 489 cagatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgcgtcg 548 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 65460 cagatcaccaaattcacctgcggcgggttcgtgatggggctccggttcaaccacgcgtcg 65519 Query: 549 gcggacggcatgggcgcggcgcagttcatcaaggcggtcggcgacatggc 598 |||||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 65520 gcggacggcatgggcgcggctcagttcatcaacgcggtgggcgacatggc 65569
>dbj|AK107836.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-H05, full insert sequence Length = 987 Score = 529 bits (267), Expect = e-147 Identities = 383/421 (90%), Gaps = 3/421 (0%) Strand = Plus / Minus Query: 71 gagcttcaaggtgacgcggatctcggagggcgcggtgaagccggcgtcggtgacgcccga 130 |||||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||| || Sbjct: 649 gagcttcaaggtgacgaggatctcggagggggcggtgaagccggcggcggcgacgccgga 590 Query: 131 ccacacgctgccgctggcgtgggtggaccggtacccgacccaccgcggcctggtggagtc 190 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 589 ggagacgctgccgctggcgtgggtggaccggtacccgacccaccgcgggctggtggagtc 530 Query: 191 gatgcacatcttccggtccggcgccgacgcggcccccggcgtgatccgcgaggcgctggg 250 |||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| | Sbjct: 529 gatgcacatcttccggtcgggcgccgacgcggccccgggcgtcatccgcgacgcgctcgc 470 Query: 251 caaggcgctggccttcttctacccgctggcggggcgcatcgtggagcagccggagaaggg 310 || |||||||| ||||||||||||||| || ||||||||||||| |||| ||| || Sbjct: 469 cagggcgctggtcttcttctacccgctcgccgggcgcatcgtgg---agcccgaggccgg 413 Query: 311 gtgccccgccatccgctgcaccgccgacggcgtctacttcgcggaggccgtcgccgagtg 370 || |||||||||||| |||||||||||||||||||||||||| ||||||| |||||| || Sbjct: 412 gtcccccgccatccggtgcaccgccgacggcgtctacttcgccgaggccgccgccgactg 353 Query: 371 cagcctggaggacgtccggttcctggagcgccccctgctgctccccaaggaggacctcgt 430 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 352 cagcctggaggacgtccgcttcctggagcgccccctcctcctccccaaggaggacctcgt 293 Query: 431 cccctaccccgccgccgacctctgggccgtcgagccccacaacaccatcatgatgatgca 490 ||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 292 cccctaccccggcgacgaccgctggggcgtcgagccccacaacaccatcatgatgatgca 233 Query: 491 g 491 | Sbjct: 232 g 232
>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence Length = 138186 Score = 494 bits (249), Expect = e-136 Identities = 375/417 (89%) Strand = Plus / Minus Query: 75 ttcaaggtgacgcggatctcggagggcgcggtgaagccggcgtcggtgacgcccgaccac 134 ||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| | Sbjct: 112382 ttcaaggtgacgcggatctcggagggccccgtgaagccggcgtcggcgacgcccgaggag 112323 Query: 135 acgctgccgctggcgtgggtggaccggtacccgacccaccgcggcctggtggagtcgatg 194 |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 112322 acgctgccgctggcttgggtggaccggtacccgacgcaccgtggcctggtggagtcgatg 112263 Query: 195 cacatcttccggtccggcgccgacgcggcccccggcgtgatccgcgaggcgctgggcaag 254 |||||||||||||| ||||| | || |||||| | ||||||||| | |||||||| |||| Sbjct: 112262 cacatcttccggtcgggcgcgggcgaggccccggccgtgatccgggcggcgctggccaag 112203 Query: 255 gcgctggccttcttctacccgctggcggggcgcatcgtggagcagccggagaaggggtgc 314 ||||||||||||||||||||||||||||| |||||||||||| | | || |||| || Sbjct: 112202 gcgctggccttcttctacccgctggcgggccgcatcgtggagggggagcagccggggcgc 112143 Query: 315 cccgccatccgctgcaccgccgacggcgtctacttcgcggaggccgtcgccgagtgcagc 374 |||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 112142 cccgccatccgctgcaccgccgacggcgtctacttcgcggaggccgaggcggactgcagc 112083 Query: 375 ctggaggacgtccggttcctggagcgccccctgctgctccccaaggaggacctcgtcccc 434 ||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||| || Sbjct: 112082 ctggaggacgtgcgcttcctggagcggcccctgctgctgcccaaggaggacctcgtgcct 112023 Query: 435 taccccgccgccgacctctgggccgtcgagccccacaacaccatcatgatgatgcag 491 ||||||| || ||||| |||| |||||||||| |||||||||||||||||||||||| Sbjct: 112022 taccccggcgacgaccgctggcccgtcgagccgcacaacaccatcatgatgatgcag 111966 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 489 cagatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgcgtcg 548 |||||||| || ||||| |||||||| |||||||||||||| |||||||||||||||||| Sbjct: 110368 cagatcaccaagttcacctgcggcggcttcgtgatgggcctgcggttcaaccacgcgtcg 110309 Query: 549 gcggacggcatgggcgcggcgcagttcatcaaggcggtcggcgacatggc 598 |||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 110308 gcggacggcatgggcgcggcgcagttcatcaacgcggtgggggacatggc 110259
>dbj|AK065320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P13, full insert sequence Length = 2131 Score = 289 bits (146), Expect = 5e-75 Identities = 176/186 (94%) Strand = Plus / Plus Query: 413 ccccaaggaggacctcgtcccctaccccgccgccgacctctgggccgtcgagccccacaa 472 ||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||| Sbjct: 966 ccccaaggaggacctcgtcccctaccccggcgacgaccgctggggcgtcgagccccacaa 1025 Query: 473 caccatcatgatgatgcagatcacgaaattcacatgcggcgggttcgtgatgggcctccg 532 |||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1026 caccatcatgatgatgcagatcaccaaattcacctgcggcgggttcgtgatggggctccg 1085 Query: 533 gttcaaccacgcgtcggcggacggcatgggcgcggcgcagttcatcaaggcggtcggcga 592 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1086 gttcaaccacgcgtcggcggacggcatgggcgcggctcagttcatcaacgcggtgggcga 1145 Query: 593 catggc 598 |||||| Sbjct: 1146 catggc 1151
>dbj|AK104360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C03, full insert sequence Length = 1097 Score = 190 bits (96), Expect = 4e-45 Identities = 114/120 (95%) Strand = Plus / Plus Query: 479 catgatgatgcagatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaa 538 |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1 catgatgatgcagatcaccaaattcacctgcggcgggttcgtgatggggctccggttcaa 60 Query: 539 ccacgcgtcggcggacggcatgggcgcggcgcagttcatcaaggcggtcggcgacatggc 598 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 61 ccacgcgtcggcggacggcatgggcgcggctcagttcatcaacgcggtgggcgacatggc 120
>dbj|AK061343.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E05, full insert sequence Length = 1097 Score = 190 bits (96), Expect = 4e-45 Identities = 114/120 (95%) Strand = Plus / Plus Query: 479 catgatgatgcagatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaa 538 |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1 catgatgatgcagatcaccaaattcacctgcggcgggttcgtgatggggctccggttcaa 60 Query: 539 ccacgcgtcggcggacggcatgggcgcggcgcagttcatcaaggcggtcggcgacatggc 598 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 61 ccacgcgtcggcggacggcatgggcgcggctcagttcatcaacgcggtgggcgacatggc 120
>dbj|AK110554.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C05, full insert sequence Length = 1033 Score = 170 bits (86), Expect = 3e-39 Identities = 104/110 (94%) Strand = Plus / Minus Query: 489 cagatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgcgtcg 548 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 882 cagatcaccaaattcacctgcggcgggttcgtgatggggctccggttcaaccacgcgtcg 823 Query: 549 gcggacggcatgggcgcggcgcagttcatcaaggcggtcggcgacatggc 598 |||||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 822 gcggacggcatgggcgcggctcagttcatcaacgcggtgggcgacatggc 773
>ref|XM_476061.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1320 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 507 tgcggcgggttcgtgatgggcctccggttcaaccacgcgtcggcggacggcatgggcgcg 566 ||||||||||||||| |||| || |||||| ||||||| |||||||||| ||| ||| Sbjct: 493 tgcggcgggttcgtggtggggttcaggttcagccacgcggtggcggacggcccgggggcg 552 Query: 567 gcgcagttcat 577 ||||||||||| Sbjct: 553 gcgcagttcat 563
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 507 tgcggcgggttcgtgatgggcctccggttcaaccacgcgtcggcggacggcatgggcgcg 566 ||||||||||||||| |||| || |||||| ||||||| |||||||||| ||| ||| Sbjct: 46662 tgcggcgggttcgtggtggggttcaggttcagccacgcggtggcggacggcccgggggcg 46603 Query: 567 gcgcagttcat 577 ||||||||||| Sbjct: 46602 gcgcagttcat 46592
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 135 acgctgccgctggcgtgggtggaccggtacccgacccaccgcggcctggtggagtcgatg 194 ||||||||||| || ||||| ||||| |||||||| ||||||||||| || ||||| || Sbjct: 22997625 acgctgccgctcgcctgggtcgaccgctacccgacgcaccgcggcctcgtcgagtccgtg 22997566 Query: 195 cacatct 201 ||||||| Sbjct: 22997565 cacatct 22997559 Score = 50.1 bits (25), Expect = 0.008 Identities = 87/105 (82%), Gaps = 2/105 (1%) Strand = Plus / Plus Query: 486 atgcagatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgc- 544 |||||| ||||| | ||| | |||||||| |||||| | || ||||||||| |||||| Sbjct: 23055782 atgcaggtcacgcagttcgcgtgcggcggcttcgtggtcgggttccggttcagccacgcc 23055841 Query: 545 gtcggcggacggcatgggcgcggcgcagttcatcaaggcggtcgg 589 |||| |||||||| ||||||||||||||||| | ||||||||| Sbjct: 23055842 gtcg-cggacggccctggcgcggcgcagttcatgacggcggtcgg 23055885 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Minus Query: 501 ttcacatgcggcgggttcgtgatgggcctccggttcaaccacgcgtcggcggacggcatg 560 ||||| |||||||| |||||||| || || || |||||||||| ||||||||||| Sbjct: 22996658 ttcacctgcggcggcttcgtgatcgggctgcgcaccaaccacgcggtggcggacggcacc 22996599 Query: 561 ggcgcggcgcagttcatcaaggcggtcggcgac 593 ||||| || |||||||| || || ||||||||| Sbjct: 22996598 ggcgccgcccagttcatgaacgccgtcggcgac 22996566 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Minus Query: 339 ggcgtctacttcgcggaggccgtcgccgagtgcagcctggaggacgtccggttcctggag 398 ||||||||||||| |||||||| |||| | |||| ||| | |||||| ||||||| Sbjct: 22997352 ggcgtctacttcgtggaggccgccgccaactgcaccctcgccgacgtcaaccacctggag 22997293 Query: 399 cgccccctgctgctccccaaggaggacctcgt 430 || || |||||||| |||||||||||||||| Sbjct: 22997292 cggccgctgctgctgtccaaggaggacctcgt 22997261
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 507 tgcggcgggttcgtgatgggcctccggttcaaccacgcgtcggcggacggcatgggcgcg 566 ||||||||||||||| |||| || |||||| ||||||| |||||||||| ||| ||| Sbjct: 4678657 tgcggcgggttcgtggtggggttcaggttcagccacgcggtggcggacggcccgggggcg 4678598 Query: 567 gcgcagttcat 577 ||||||||||| Sbjct: 4678597 gcgcagttcat 4678587
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 135 acgctgccgctggcgtgggtggaccggtacccgacccaccgcggcctggtggagtcgatg 194 ||||||||||| || ||||| ||||| |||||||| ||||||||||| || ||||| || Sbjct: 64169 acgctgccgctcgcctgggtcgaccgctacccgacgcaccgcggcctcgtcgagtccgtg 64110 Query: 195 cacatct 201 ||||||| Sbjct: 64109 cacatct 64103 Score = 50.1 bits (25), Expect = 0.008 Identities = 87/105 (82%), Gaps = 2/105 (1%) Strand = Plus / Plus Query: 486 atgcagatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgc- 544 |||||| ||||| | ||| | |||||||| |||||| | || ||||||||| |||||| Sbjct: 122326 atgcaggtcacgcagttcgcgtgcggcggcttcgtggtcgggttccggttcagccacgcc 122385 Query: 545 gtcggcggacggcatgggcgcggcgcagttcatcaaggcggtcgg 589 |||| |||||||| ||||||||||||||||| | ||||||||| Sbjct: 122386 gtcg-cggacggccctggcgcggcgcagttcatgacggcggtcgg 122429 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Minus Query: 501 ttcacatgcggcgggttcgtgatgggcctccggttcaaccacgcgtcggcggacggcatg 560 ||||| |||||||| |||||||| || || || |||||||||| ||||||||||| Sbjct: 63202 ttcacctgcggcggcttcgtgatcgggctgcgcaccaaccacgcggtggcggacggcacc 63143 Query: 561 ggcgcggcgcagttcatcaaggcggtcggcgac 593 ||||| || |||||||| || || ||||||||| Sbjct: 63142 ggcgccgcccagttcatgaacgccgtcggcgac 63110 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Minus Query: 339 ggcgtctacttcgcggaggccgtcgccgagtgcagcctggaggacgtccggttcctggag 398 ||||||||||||| |||||||| |||| | |||| ||| | |||||| ||||||| Sbjct: 63896 ggcgtctacttcgtggaggccgccgccaactgcaccctcgccgacgtcaaccacctggag 63837 Query: 399 cgccccctgctgctccccaaggaggacctcgt 430 || || |||||||| |||||||||||||||| Sbjct: 63836 cggccgctgctgctgtccaaggaggacctcgt 63805
>dbj|AK100028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147B02, full insert sequence Length = 1897 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 507 tgcggcgggttcgtgatgggcctccggttcaaccacgcgtcggcggacggcatgggcgcg 566 ||||||||||||||| |||| || |||||| ||||||| |||||||||| ||| ||| Sbjct: 580 tgcggcgggttcgtggtggggttcaggttcagccacgcggtggcggacggcccgggggcg 639 Query: 567 gcgcagttcat 577 ||||||||||| Sbjct: 640 gcgcagttcat 650
>gb|AC072052.6| Homo sapiens BAC clone CTD-2195F21 from 7, complete sequence Length = 137074 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 240 gaggcgctgggcaaggcgctggccttctt 268 |||| |||||||||||||||||||||||| Sbjct: 57708 gaggagctgggcaaggcgctggccttctt 57680
>gb|BT009450.1| Triticum aestivum clone wlmk8.pk0021.e3:fis, full insert mRNA sequence Length = 1587 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 243 gcgctgggcaaggcgctggccttcttctacccgctggcggggcgc 287 ||||||| ||||||||||| |||||||||||||||| |||||| Sbjct: 242 gcgctggccaaggcgctggtgctcttctacccgctggccgggcgc 286
>ref|XM_935672.1| PREDICTED: Homo sapiens similar to glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1 (LOC641916), mRNA Length = 3972 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 240 gaggcgctgggcaaggcgctggccttctt 268 |||| |||||||||||||||||||||||| Sbjct: 3799 gaggagctgggcaaggcgctggccttctt 3827
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 50.1 bits (25), Expect = 0.008 Identities = 87/105 (82%), Gaps = 2/105 (1%) Strand = Plus / Plus Query: 486 atgcagatcacgaaattcacatgcggcgggttcgtgatgggcctccggttcaaccacgc- 544 |||||| ||||| | ||| | |||||||| |||||| | || ||||||||| |||||| Sbjct: 6430 atgcaggtcacgcagttcgcgtgcggcggcttcgtggtcgggttccggttcagccacgcc 6489 Query: 545 gtcggcggacggcatgggcgcggcgcagttcatcaaggcggtcgg 589 |||| |||||||| ||||||||||||||||| | ||||||||| Sbjct: 6490 gtcg-cggacggccctggcgcggcgcagttcatgacggcggtcgg 6533
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 239 cgaggcgctgggcaaggcgctgg 261 ||||||||||||||||||||||| Sbjct: 1425191 cgaggcgctgggcaaggcgctgg 1425169
>gb|AC147479.17| Mus musculus chromosome 17, clone RP24-178C19, complete sequence Length = 178820 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gctgctccccaaggaggacctc 428 |||||||||||||||||||||| Sbjct: 8562 gctgctccccaaggaggacctc 8583
>gb|AC169675.2| Mus musculus BAC clone RP24-200J3 from chromosome 17, complete sequence Length = 171242 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gctgctccccaaggaggacctc 428 |||||||||||||||||||||| Sbjct: 162983 gctgctccccaaggaggacctc 163004
>ref|XM_596272.2| PREDICTED: Bos taurus similar to glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1 (LOC518088), mRNA Length = 2424 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 240 gaggcgctgggcaaggcgctggccttcttc 269 |||| ||||||||| ||||||||||||||| Sbjct: 2251 gaggagctgggcaaagcgctggccttcttc 2280
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 106 tgaagccggcgtcggtgacgcccgac 131 ||||||||||| |||||||||||||| Sbjct: 3088825 tgaagccggcgccggtgacgcccgac 3088850 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 gaggcgctgggcaaggcgctgg 261 |||||||||||||||||||||| Sbjct: 550460 gaggcgctgggcaaggcgctgg 550481
>dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, complete sequence Length = 184026 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 102 gcggtgaagccggcgtcggtgacgcc 127 |||||||| ||||||||||||||||| Sbjct: 141734 gcggtgaacccggcgtcggtgacgcc 141759
>gb|AC171111.2| Mus musculus BAC clone RP24-131J20 from chromosome 17, complete sequence Length = 167872 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 gctgctccccaaggaggacctc 428 |||||||||||||||||||||| Sbjct: 105270 gctgctccccaaggaggacctc 105291
>ref|NM_189533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1314 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 529 tccggttcaaccacgcgtcggcggacggcatgggcgcggcgcagttcat 577 ||||||||| ||||||| |||||||||| ||||| ||||||||||| Sbjct: 485 tccggttcagccacgcggtggcggacggccccggcgcagcgcagttcat 533
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 ccccgccatccgctgcaccgc 334 ||||||||||||||||||||| Sbjct: 1423081 ccccgccatccgctgcaccgc 1423101
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 cgaggcgctgggcaaggcgct 259 ||||||||||||||||||||| Sbjct: 1563893 cgaggcgctgggcaaggcgct 1563913
>emb|AJ302783.1|ZMA302783 Zea mays mRNA for putative gamma-glutamylcysteine synthetase (gsh1 gene) Length = 1664 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 gctccccaaggaggacctcgtcccctacc 438 |||| ||||||||||||||||| |||||| Sbjct: 50 gctcaccaaggaggacctcgtcgcctacc 78
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 gcgctgggcaaggcgctggcc 263 ||||||||||||||||||||| Sbjct: 4089228 gcgctgggcaaggcgctggcc 4089248
>dbj|AK143213.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130310E04 product:hypothetical protein, full insert sequence Length = 2109 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 tggcggggcgcatcgtggagc 297 ||||||||||||||||||||| Sbjct: 228 tggcggggcgcatcgtggagc 248
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 239 cgaggcgctgggcaaggcgctggcc 263 ||||||||| ||||||||||||||| Sbjct: 1031796 cgaggcgctcggcaaggcgctggcc 1031772
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 529 tccggttcaaccacgcgtcggcggacggcatgggcgcggcgcagttcat 577 ||||||||| ||||||| |||||||||| ||||| ||||||||||| Sbjct: 77262 tccggttcagccacgcggtggcggacggccccggcgcagcgcagttcat 77214
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 gccgctggcgtgggtggaccg 160 ||||||||||||||||||||| Sbjct: 368151 gccgctggcgtgggtggaccg 368171
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 529 tccggttcaaccacgcgtcggcggacggcatgggcgcggcgcagttcat 577 ||||||||| ||||||| |||||||||| ||||| ||||||||||| Sbjct: 57490 tccggttcagccacgcggtggcggacggccccggcgcagcgcagttcat 57442
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 ggcgtgatccgcgaggcgctg 248 ||||||||||||||||||||| Sbjct: 2003188 ggcgtgatccgcgaggcgctg 2003208
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 245 gctgggcaaggcgctggccttcttc 269 ||||||||||||||||||| ||||| Sbjct: 3558866 gctgggcaaggcgctggccatcttc 3558890 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 cgcggtgaagccggcgtcggt 121 ||||||||||||||||||||| Sbjct: 2965619 cgcggtgaagccggcgtcggt 2965599 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgcggtgaagccggcgtcgg 120 |||||||||||||||||||| Sbjct: 747838 cgcggtgaagccggcgtcgg 747819
>gb|AC154237.1| Mus musculus BAC clone RP24-162O18 from 17, complete sequence Length = 168481 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 tggcggggcgcatcgtggagc 297 ||||||||||||||||||||| Sbjct: 74870 tggcggggcgcatcgtggagc 74890
>ref|XM_480954.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 cggcgccgacgcggcccccg 228 |||||||||||||||||||| Sbjct: 73 cggcgccgacgcggcccccg 54
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 cgcggcgcagttcatcaaggcggtcggc 590 |||| ||||||||||| ||||||||||| Sbjct: 1315694 cgcgacgcagttcatccaggcggtcggc 1315721
>ref|XM_463664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 507 tgcggcgggttcgtgatgggcctc 530 ||||||||||||||| |||||||| Sbjct: 454 tgcggcgggttcgtgctgggcctc 477
>gb|AY641734.2| Camellia sinensis manganese superoxide dismutase mRNA, complete cds Length = 1095 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ggccatggcgtcgtcgagct 75 |||||||||||||||||||| Sbjct: 342 ggccatggcgtcgtcgagct 323
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ccgaccacacgctgccgctg 146 |||||||||||||||||||| Sbjct: 862267 ccgaccacacgctgccgctg 862286 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ccgaccacacgctgccgctg 146 |||||||||||||||||||| Sbjct: 830243 ccgaccacacgctgccgctg 830224
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccatggcgtcgtcgagcttc 77 |||||||||||||||||||| Sbjct: 73585 ccatggcgtcgtcgagcttc 73604
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 gcgcagttcatcaaggcggt 586 |||||||||||||||||||| Sbjct: 552405 gcgcagttcatcaaggcggt 552424
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 cgcggcgcagttcatcaaggcggtcggc 590 |||| ||||||||||| ||||||||||| Sbjct: 1719886 cgcgacgcagttcatccaggcggtcggc 1719859
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 gcgcagttcatcaaggcggt 586 |||||||||||||||||||| Sbjct: 3222367 gcgcagttcatcaaggcggt 3222348
>gb|AF486581.1| Uncultured bacterium aminoglycoside 3'-N-acetyltransferase gene, complete cds Length = 38269 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 554 cggcatgggcgcggcgcagttcatcaaggcgg 585 ||||||| |||||||||||||| |||||||| Sbjct: 34882 cggcatgcacgcggcgcagttcagcaaggcgg 34851
>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence Length = 116699 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 tgatgatgcagatcacgaaattca 504 ||||||||||||||| |||||||| Sbjct: 4858 tgatgatgcagatcaagaaattca 4881
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 gaggcgctgggcaaggcgct 259 |||||||||||||||||||| Sbjct: 811324 gaggcgctgggcaaggcgct 811343
>emb|BX927155.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 8/10 Length = 349136 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gatccgcgaggcgctgggca 252 |||||||||||||||||||| Sbjct: 305149 gatccgcgaggcgctgggca 305130
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cgagcttcaaggtgacgcgg 89 |||||||||||||||||||| Sbjct: 113386 cgagcttcaaggtgacgcgg 113405
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 cgcggcgcagttcatcaaggcggtcggc 590 |||| ||||||||||| ||||||||||| Sbjct: 3054738 cgcgacgcagttcatccaggcggtcggc 3054711
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 gcgcagttcatcaaggcggt 586 |||||||||||||||||||| Sbjct: 2952232 gcgcagttcatcaaggcggt 2952213
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gcggtgaagccggcgtcggt 121 |||||||||||||||||||| Sbjct: 33636 gcggtgaagccggcgtcggt 33655
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 cggcgccgacgcggcccccggcgt 232 ||||||||||||||| |||||||| Sbjct: 35940 cggcgccgacgcggcgcccggcgt 35963
>emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81, strain A8 Length = 98192 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cggtgacgcccgaccacacg 137 |||||||||||||||||||| Sbjct: 4754 cggtgacgcccgaccacacg 4773
>emb|AJ431260.1|UNK431260 Uncultured bacterium plasmid pB4 complete genome Length = 79370 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cggtgacgcccgaccacacg 137 |||||||||||||||||||| Sbjct: 44100 cggtgacgcccgaccacacg 44119
>gb|AF084831.1| Cinnamomum camphora Fe-SOD mRNA, partial cds Length = 764 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ggccatggcgtcgtcgagct 75 |||||||||||||||||||| Sbjct: 105 ggccatggcgtcgtcgagct 86
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 tcaaggtgacgcggatctcg 95 |||||||||||||||||||| Sbjct: 375497 tcaaggtgacgcggatctcg 375478
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gatccgcgaggcgctgggca 252 |||||||||||||||||||| Sbjct: 512579 gatccgcgaggcgctgggca 512560
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 cgtgatccgcgaggcgctgg 249 |||||||||||||||||||| Sbjct: 1008527 cgtgatccgcgaggcgctgg 1008546
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gcggtgaagccggcgtcggt 121 |||||||||||||||||||| Sbjct: 1629400 gcggtgaagccggcgtcggt 1629419
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 cgcggcgcagttcatcaaggcggtcggc 590 |||| ||||||||||| ||||||||||| Sbjct: 2203380 cgcgacgcagttcatccaggcggtcggc 2203353
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 cggcgccgacgcggcccccggcgt 232 ||||||||||||||| |||||||| Sbjct: 34581819 cggcgccgacgcggcgcccggcgt 34581842
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccatggcgtcgtcgagcttc 77 |||||||||||||||||||| Sbjct: 7614499 ccatggcgtcgtcgagcttc 7614518
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 ttctacccgctggcggggcg 286 |||||||||||||||||||| Sbjct: 15201367 ttctacccgctggcggggcg 15201348
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 cggcgccgacgcggcccccg 228 |||||||||||||||||||| Sbjct: 8883044 cggcgccgacgcggcccccg 8883025
>gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15M6 genomic sequence, complete sequence Length = 103637 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 tgcagatcacgaaattcaca 506 |||||||||||||||||||| Sbjct: 23747 tgcagatcacgaaattcaca 23766
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gatccgcgaggcgctgggca 252 |||||||||||||||||||| Sbjct: 2776341 gatccgcgaggcgctgggca 2776322
>gb|AF276976.1|AF276976 Pseudomonas aeruginosa iron transport protein Fiu (fiu) gene, complete cds Length = 2262 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ggtgaagccggcgtcggtga 123 |||||||||||||||||||| Sbjct: 594 ggtgaagccggcgtcggtga 575
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 507 tgcggcgggttcgtgatgggcctc 530 ||||||||||||||| |||||||| Sbjct: 63952 tgcggcgggttcgtgctgggcctc 63975
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 gcggtgaagccggcgtcggt 121 |||||||||||||||||||| Sbjct: 6737893 gcggtgaagccggcgtcggt 6737874
>gb|AE004919.1| Pseudomonas aeruginosa PAO1, section 480 of 529 of the complete genome Length = 11267 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 aggcgctgggcaaggcgctggcct 264 ||||||||| |||||||||||||| Sbjct: 7785 aggcgctggacaaggcgctggcct 7762
>gb|AE004865.1| Pseudomonas aeruginosa PAO1, section 426 of 529 of the complete genome Length = 10413 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ggtgaagccggcgtcggtga 123 |||||||||||||||||||| Sbjct: 5611 ggtgaagccggcgtcggtga 5630
>gb|AC090952.3| Homo sapiens chromosome 3 clone RP11-588H7 map 3p, complete sequence Length = 189723 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 tcctggagcgccccctgctg 410 |||||||||||||||||||| Sbjct: 164873 tcctggagcgccccctgctg 164892
>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1033_B09 Length = 120648 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 cggcgccgacgcggcccccg 228 |||||||||||||||||||| Sbjct: 66687 cggcgccgacgcggcccccg 66668
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 ttctacccgctggcggggcg 286 |||||||||||||||||||| Sbjct: 95343 ttctacccgctggcggggcg 95324
>dbj|AK101900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071B22, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ttctacccgctggcggggcg 286 |||||||||||||||||||| Sbjct: 309 ttctacccgctggcggggcg 328
>dbj|AK072874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145I07, full insert sequence Length = 1997 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 cggcgccgacgcggcccccggcgt 232 ||||||||||||||| |||||||| Sbjct: 124 cggcgccgacgcggcgcccggcgt 101
>dbj|AK058559.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D08, full insert sequence Length = 1706 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ttctacccgctggcggggcg 286 |||||||||||||||||||| Sbjct: 308 ttctacccgctggcggggcg 327
>emb|AL732350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0101F08, complete sequence Length = 63897 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 cggcgccgacgcggcccccggcgt 232 ||||||||||||||| |||||||| Sbjct: 35203 cggcgccgacgcggcgcccggcgt 35226
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gatccgcgaggcgctgggca 252 |||||||||||||||||||| Sbjct: 524723 gatccgcgaggcgctgggca 524704
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 563 cgcggcgcagttcatcaaggcggtcggc 590 |||| ||||||||||| ||||||||||| Sbjct: 2822163 cgcgacgcagttcatccaggcggtcggc 2822136
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 gcgcagttcatcaaggcggt 586 |||||||||||||||||||| Sbjct: 1922200 gcgcagttcatcaaggcggt 1922219
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 219 gcggcccccggcgtgatccgcgaggcgc 246 ||||||||||||||| ||||||||||| Sbjct: 913848 gcggcccccggcgtggcccgcgaggcgc 913875
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccatggcgtcgtcgagcttc 77 |||||||||||||||||||| Sbjct: 7684586 ccatggcgtcgtcgagcttc 7684605
>gb|AF051690.1|AF051690 Pseudomonas aeruginosa iron-uptake factor (piuC), hydroxamate-type ferrisiderophore receptor (piuA), and iron-uptake factor (piuB) genes, complete cds Length = 7701 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ggtgaagccggcgtcggtga 123 |||||||||||||||||||| Sbjct: 2726 ggtgaagccggcgtcggtga 2707 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,427,402 Number of Sequences: 3902068 Number of extensions: 3427402 Number of successful extensions: 75926 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70860 Number of HSP's gapped (non-prelim): 5066 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
