ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart46h10 |
|---|---|
| Clone Library Name | barley_pub |
>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Amylogenin) (Golgi-associated protein se-wap41) Length = 364 Score = 328 bits (842), Expect = 5e-90 Identities = 154/161 (95%), Positives = 158/161 (98%) Frame = +3 Query: 90 MAGTVTVPGSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIK 269 MAGTVTVPGSS PSTPLLKDELDIVIPTIRNLDFLEMWR FFQPYHLIIVQDGDP+K IK Sbjct: 1 MAGTVTVPGSSTPSTPLLKDELDIVIPTIRNLDFLEMWRAFFQPYHLIIVQDGDPTKTIK 60 Query: 270 VPEGFDYDLYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPS 449 VPEGFDY+LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDPS Sbjct: 61 VPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPS 120 Query: 450 GKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYP 572 GKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYP Sbjct: 121 GKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYP 161
>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) Length = 366 Score = 307 bits (786), Expect = 2e-83 Identities = 144/153 (94%), Positives = 147/153 (96%) Frame = +3 Query: 114 GSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYD 293 GSSV TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSK I VPEGFDY+ Sbjct: 3 GSSVTPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDYE 62 Query: 294 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALE 473 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDPSGKDINALE Sbjct: 63 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALE 122 Query: 474 QHIKNLLSPSTPFFFNTLYDPYREGADFVRGYP 572 QHIKNLL PSTP FFNTLYDPYREGADFVRGYP Sbjct: 123 QHIKNLLCPSTPHFFNTLYDPYREGADFVRGYP 155
>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) Length = 365 Score = 302 bits (773), Expect = 5e-82 Identities = 140/148 (94%), Positives = 145/148 (97%) Frame = +3 Query: 129 STPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYDLYNRN 308 +TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSK IKVPEGFDY+LYNRN Sbjct: 4 ATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYNRN 63 Query: 309 DINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKN 488 DINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDPSGKDINALEQHIKN Sbjct: 64 DINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKN 123 Query: 489 LLSPSTPFFFNTLYDPYREGADFVRGYP 572 LL PSTP FFNTLYDPYR+GADFVRGYP Sbjct: 124 LLCPSTPHFFNTLYDPYRDGADFVRGYP 151
>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) Length = 364 Score = 297 bits (761), Expect = 1e-80 Identities = 139/153 (90%), Positives = 147/153 (96%), Gaps = 1/153 (0%) Frame = +3 Query: 117 SSVPS-TPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYD 293 +S+P TPLLKDELDIVIPTIRNLDFLEMWRPFF+ YHLIIVQDGDPSK IKVPEGFDY+ Sbjct: 2 ASLPKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDYE 61 Query: 294 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALE 473 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKY++TIDDDCFVAKDP+G +INALE Sbjct: 62 LYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALE 121 Query: 474 QHIKNLLSPSTPFFFNTLYDPYREGADFVRGYP 572 QHIKNLLSPSTPFFFNTLYDPYREG DFVRGYP Sbjct: 122 QHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYP 154
>S23IP_HUMAN (Q9Y6Y8) SEC23-interacting protein (p125)| Length = 1000 Score = 32.7 bits (73), Expect = 0.75 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Frame = +3 Query: 66 IEIPGQEAMAGTVTVPGSSVPSTPLLKDELDIVIP---TIRNLDFLEMWRPF--FQPYHL 230 ++ P Q+ + P VPS LL+++ + V P + +++ ++W PF F +L Sbjct: 237 VQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKEVEYKQLWMPFSVFDSLNL 296 Query: 231 IIVQDG---DPSKAIKVPEGFDYDLY 299 + + DP + +G YD+Y Sbjct: 297 EEIYNSVQPDPESVVLGTDGGRYDVY 322
>NUSG_BUCAP (Q8KA65) Transcription antitermination protein nusG| Length = 181 Score = 30.8 bits (68), Expect = 2.9 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = +3 Query: 108 VPGSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFD 287 + G S +P+ E+DI+I +R + + F+P +I V DG + V E D Sbjct: 93 IGGKSDKPSPISDKEVDIIINRLRQIGDKPRPKTLFEPGEMIRVNDGPFADFNGVVEEVD 152 Query: 288 YD 293 Y+ Sbjct: 153 YE 154
>YCBL_BACSU (P42244) Hypothetical sensory transduction protein ycbL| Length = 226 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +3 Query: 153 LDIVIPTIRNLDFLEMWRPFFQ-PYHLIIVQDGDPSKAIKVPEGFD 287 LDI++P + +DFL++ R P +I +DGD KA+ + G D Sbjct: 47 LDIMLPKLNGMDFLKIIREKSNIPVLMISAKDGDVDKALGLGFGAD 92
>PLSX_SALTY (P0A259) Fatty acid/phospholipid synthesis protein plsX| Length = 359 Score = 30.4 bits (67), Expect = 3.7 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 6/67 (8%) Frame = +3 Query: 99 TVTVPGS------SVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSK 260 +VTVP + + T LL DI+ P + DF + R P +I D PS+ Sbjct: 18 SVTVPAALQALNANSQLTLLLVGNPDIITPLLAKADFEQRSRLQIIPAQSVIASDARPSQ 77 Query: 261 AIKVPEG 281 AI+ G Sbjct: 78 AIRASRG 84
>PLSX_SALTI (P0A260) Fatty acid/phospholipid synthesis protein plsX| Length = 359 Score = 30.4 bits (67), Expect = 3.7 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 6/67 (8%) Frame = +3 Query: 99 TVTVPGS------SVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSK 260 +VTVP + + T LL DI+ P + DF + R P +I D PS+ Sbjct: 18 SVTVPAALQALNANSQLTLLLVGNPDIITPLLAKADFEQRSRLQIIPAQSVIASDARPSQ 77 Query: 261 AIKVPEG 281 AI+ G Sbjct: 78 AIRASRG 84
>MUT7_CAEEL (P34607) Probable exonuclease mut-7 (EC 3.1.-.-)| Length = 910 Score = 30.0 bits (66), Expect = 4.9 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = +3 Query: 63 EIEIPGQEAMAGTVTVPGSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLII 236 EIE G E + +TVP S + + D I IP + N+ ++ FF +++ I Sbjct: 702 EIERVGGEHLRHIITVPSKSYEALKMDYDNYTIAIPELNNMSPVDQLIEFFDLFNVDI 759
>Y868_HAEIN (Q57022) Putative glycosyl transferase HI0868 (EC 2.-.-.-)| Length = 250 Score = 30.0 bits (66), Expect = 4.9 Identities = 23/100 (23%), Positives = 44/100 (44%) Frame = +3 Query: 180 NLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYDLYNRNDINRILGPKASCISFKD 359 N L +Q LI++ DG K+I++ + N D ++ + + + Sbjct: 20 NQGILSCLNQSYQNIELILIDDGSTDKSIEI-------INNIIDKDKRVKLFFTPTNQGP 72 Query: 360 SACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQH 479 +A R G ++ Y+ +D D F+A D K +N + Q+ Sbjct: 73 AAARNIGLEKAQGDYITFLDSDDFIANDKLEKQLNFMLQN 112
>YD14_SCHPO (Q10237) Hypothetical protein C4G9.04c in chromosome I| Length = 638 Score = 29.6 bits (65), Expect = 6.4 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Frame = +3 Query: 24 PYHRLLEQLDPGLEIEIPGQEAMAGTVT----VPG--SSVPSTPLLKDELDIVIPTIRNL 185 PY +LL + ++E P + + T VP SS+ STP +K + IPTI + Sbjct: 251 PYDQLLAIKNQLAQLEKPASPSTSSVATSAPSVPSALSSISSTPFMKPSIPSTIPTIPSA 310 Query: 186 --DFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFDYDLYNRN 308 + P Y V G S + G LYN N Sbjct: 311 YSASVSSQPPLTHSY----VHPGPQSHKYSLSSGPPASLYNAN 349
>G6PI_BURS3 (Q39FF4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 540 Score = 29.3 bits (64), Expect = 8.3 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = +3 Query: 48 LDPGLEIEIPGQEAMAGTVTVPGSSVPSTPLLKDEL 155 LD ++ PG+EA+A +T PG+ P+T LL D L Sbjct: 432 LDEARKVAGPGKEALAPHLTFPGNR-PTTTLLVDAL 466
>NUSG_BUCAI (P57151) Transcription antitermination protein nusG| Length = 181 Score = 29.3 bits (64), Expect = 8.3 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +3 Query: 108 VPGSSVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKAIKVPEGFD 287 + G S +P+ E++I+I +R + + F+P +I V DG + V E D Sbjct: 93 IGGKSDKPSPISDKEVEIIINRLRKIGNKPRPKTLFEPGEMIRVNDGPFADFNGVVEEVD 152 Query: 288 YD 293 Y+ Sbjct: 153 YE 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,741,080 Number of Sequences: 219361 Number of extensions: 1278475 Number of successful extensions: 4416 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 4313 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4414 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
