ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart46b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DCK1_FOWPV (P21974) Probable deoxycytidine kinase FPV059 (EC 2.7... 30 5.9

>DCK1_FOWPV (P21974) Probable deoxycytidine kinase FPV059 (EC 2.7.1.74) (dCK)|
          Length = 219

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +1

Query: 346 FLFVADVAELARMADPRYAVLCVHHD-YTPKEATKMDGAV 462
           ++F      L  M DP +A+ C  HD YT K   + DG +
Sbjct: 100 YVFAEAATALGYMDDPEWALYCKQHDWYTDKLEIQFDGII 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,810,429
Number of Sequences: 219361
Number of extensions: 925943
Number of successful extensions: 3395
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3386
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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