>ARHGB_RAT (Q9ES67) Rho guanine nucleotide exchange factor 11 (RhoGEF glutamate|
            transport modulator GTRAP48)
          Length = 1527

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -1

Query: 206  AQATAETTRSRGRAAPLRHAASPTPTPPLPRLAIGLPSLPREPE 75
            AQAT         A PL  +  PT TPP P     LP+ P EP+
Sbjct: 1366 AQATGNCFYVSMPAGPLDSSTEPTGTPPSPSQCHSLPAWPTEPQ 1409

>YM41_YEAST (Q03213) Hypothetical 79.4 kDa protein in ALD2-DDR48 intergenic|
           region
          Length = 719

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 20/73 (27%), Positives = 36/73 (49%)
 Frame = -1

Query: 386 GMTTASGSSATGIEQRWSGLDGGSIRSDARTTSPPFLQRAERK*ADGEAQDQRWKARRSS 207
           G  +ASGS+A+ +    + LDGG +R+ A  ++P    +      +  + ++R     S+
Sbjct: 74  GSESASGSNASTLRNDGNALDGGLLRTSAAISAPTGTSQPTETIGEKLSNEER---VNSN 130

Query: 206 AQATAETTRSRGR 168
             A+  TT   GR
Sbjct: 131 VSASNSTTAGTGR 143

>Y4024_STRAW (Q82G74) UPF0256 protein SAV4024|
          Length = 418

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = -1

Query: 356 TGIEQRWSGL-DGGSI----RSDARTTSPPFLQRAERK*ADGEAQDQRW 225
           TG++ RWSG  DGG I      D R   P   +R  R      ++D+RW
Sbjct: 149 TGLDPRWSGPGDGGRIDLVDGEDVRKAGPELHERLRRTQPGAVSRDERW 197

>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
           (Trithorax homolog 2)
          Length = 2715

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
 Frame = -1

Query: 350 IEQRWSG--LDGGSIRSDARTTSPPFLQRAERK*ADGEAQDQRWKARRSSAQATAETTRS 177
           + + W+G  +  G  R   R   P      E + +DGE+ ++ ++   S       + RS
Sbjct: 80  LRRLWAGPRVQRGRGRGRGRGWGPSRGCVPEEESSDGESDEEEFQGFHSDEDVAPSSLRS 139

Query: 176 -----RGRAAPLRHAASPTPTPPLPRLAIGLPSLPREP 78
                RGRA   R     T   P PRLA   P+ P+ P
Sbjct: 140 ALRSQRGRAPRGRGRKHKTTPLPPPRLADVAPTPPKTP 177

>VE2_HPV20 (P50766) Regulatory protein E2|
          Length = 497

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = -1

Query: 323 GGSIRSDARTTSPPFLQRAERK*ADGEAQD-QRWKARRSSAQATAETTRSRGRAAPLR-H 150
           GGS  S + TTS    QR+ +    G     QR + RRSS+ +   + RSRG +  +R H
Sbjct: 327 GGSPTSTSSTTS----QRSRQLRGGGRGGSRQRARGRRSSSTSPTPSKRSRGESESVRQH 382

Query: 149 AASPT 135
             SP+
Sbjct: 383 GISPS 387

>KCNK4_HUMAN (Q9NYG8) Potassium channel subfamily K member 4 (TWIK-related|
           arachidonic acid-stimulated potassium channel protein)
           (TRAAK) (Two pore K(+) channel KT4.1)
          Length = 393

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -1

Query: 197 TAETTRSRGRAAPLRHAASPT-PTPPLPRLAIGLPSLPREPEQ 72
           TA  T+  G AAP      P  P PP P   +G P  P  PE+
Sbjct: 283 TARVTQRAGPAAPPPEKEQPLLPPPPCPAQPLGRPRSPSPPEK 325

>CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog|
          Length = 775

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 22/65 (33%), Positives = 30/65 (46%)
 Frame = -1

Query: 317 SIRSDARTTSPPFLQRAERK*ADGEAQDQRWKARRSSAQATAETTRSRGRAAPLRHAASP 138
           S+R    +  PP    +  K  + E Q Q+W A +S  +A   T  + G AAP   A  P
Sbjct: 519 SLRKRKASPEPPDSAESALKLGE-EQQRQQWMANQS--EALKLTMSAGGFAAPGHSAGGP 575

Query: 137 TPTPP 123
            P PP
Sbjct: 576 PPPPP 580

>DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2)
          Length = 1101

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -1

Query: 302 ARTTSPPFLQRAERK*ADGEAQDQRWKARRSSAQATAETTRSRGR-AAPLRHAASPTPTP 126
           AR  +   LQ+ + K  + EA+ Q+    R+ AQ  + ++   G  AAP      P P P
Sbjct: 510 ARQEAQAELQKRDEKIKELEAEIQQL---RTQAQVLSSSSGIPGPPAAPPLPGVGPPPPP 566

Query: 125 PLPRLAIGLPSLPREP 78
           P P L  G P  P  P
Sbjct: 567 PAPPLPGGAPLPPPPP 582

>SAM68_CHICK (Q8UUW7) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (Src-associated in
           mitosis 68 kDa protein) (Sam68)
          Length = 433

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -1

Query: 179 SRGRAAPLR-HAASPTPTPPLPR-LAIGLPSLPREP 78
           +RGR  P+R   A+P P PP+PR   +G P  P  P
Sbjct: 264 TRGRGGPVRGRGAAPPPPPPVPRGRGVGPPPPPPPP 299

>YFRD_SCHPO (Q9UT43) Putative phospholipid-transporting ATPase C821.13c (EC|
           3.6.3.1)
          Length = 1562

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 233 QRWKARRSSAQATAETTRSRGRAAPLRHAASPTPTPPLP 117
           +RW+  RS   A+  T RS     P R +  P   PP P
Sbjct: 340 RRWRRSRSQESASRSTIRSTDEREPERTSEDPPQLPPSP 378

>CN004_HUMAN (Q9H1B7) Protein C14orf4|
          Length = 796

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 23/67 (34%), Positives = 29/67 (43%)
 Frame = -1

Query: 317 SIRSDARTTSPPFLQRAERK*ADGEAQDQRWKARRSSAQATAETTRSRGRAAPLRHAASP 138
           S+R    +  PP       K  + E Q Q+W A +S A    + T S G  A   HAA  
Sbjct: 540 SLRKRKASPEPPDSAEGALKLGE-EQQRQQWMANQSEA---LKLTMSAGGFAAPGHAAGG 595

Query: 137 TPTPPLP 117
            P PP P
Sbjct: 596 PPPPPPP 602

>SREP_PENCH (Q92259) GATA factor SREP|
          Length = 532

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/71 (26%), Positives = 28/71 (39%)
 Frame = -1

Query: 215 RSSAQATAETTRSRGRAAPLRHAASPTPTPPLPRLAIGLPSLPREPEQXXXXXXXXXXXA 36
           +S  +    +  + GR  P+ H+ SP+P PP P     LP L    +             
Sbjct: 460 QSDVRGEPRSDNNLGRPPPIHHSVSPSPHPPQP-----LPGLASLGDSVDRRARLEREAE 514

Query: 35  DRREGERKEER 3
             RE  R +ER
Sbjct: 515 QMREMLRAKER 525

>CTND2_HUMAN (Q9UQB3) Catenin delta-2 (Delta-catenin) (Neural|
           plakophilin-related ARM-repeat protein) (NPRAP)
           (Neurojungin) (GT24)
          Length = 1225

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -1

Query: 248 GEAQDQRWKARRSSAQATAETTRSRGRAAPLRHAASPTPTPPLPRLAIGLPSLPREP 78
           GE    +  AR + A+AT ++  S+G  +   H A P P PP        P  PREP
Sbjct: 181 GETTPSQLPARGTQARATGQSF-SQGTTSRAGHLAGPEPAPP-------PPPPPREP 229

>RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology domains-containing|
           protein 1 (RAPH1) (Lamellipodin) (Proline-rich EVH1
           ligand 2) (PREL-2) (Protein RMO1) (Amyotrophic lateral
           sclerosis 2 chromosomal region candidate 9 gene protein)
          Length = 1302

 Score = 26.2 bits (56), Expect(2) = 3.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 185 TRSRGRAAPLRHAASPTPTPPLP 117
           T ++  A  +  AA PTPTPP+P
Sbjct: 841 TSTKTVAPVVTQAAPPTPTPPVP 863



 Score = 22.7 bits (47), Expect(2) = 3.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 134 PTPPLPRLAIGLPSLPRE 81
           P+PP P + +  P+LP++
Sbjct: 878 PSPPTPPVPVPPPTLPKQ 895

>SMYD3_MOUSE (Q9CWR2) SET and MYND domain-containing protein 3 (EC 2.1.1.43)|
           (Zinc finger MYND domain-containing protein 1)
          Length = 428

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 427 ITVDKRDKDSPPLFGGRQTWKQREESFKVNATMKVH 534
           I    +DKD+  L G  Q WK+ +ES K    +K H
Sbjct: 264 IRCQTQDKDADMLTGDEQIWKEVQESLKKIEELKAH 299

>SMYD3_HUMAN (Q9H7B4) SET and MYND domain-containing protein 3 (EC 2.1.1.43)|
           (Zinc finger MYND domain-containing protein 1)
          Length = 428

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 442 RDKDSPPLFGGRQTWKQREESFKVNATMKVH 534
           +DKD+  L G  Q WK+ +ES K    +K H
Sbjct: 269 QDKDADMLTGDEQVWKEVQESLKKIEELKAH 299

>CATA3_MAIZE (P18123) Catalase isozyme 3 (EC 1.11.1.6)|
          Length = 496

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = -1

Query: 170 RAAPLRHAASPTPTPPLP 117
           R APLR AA PTP PP P
Sbjct: 399 RHAPLRQAAPPTPLPPRP 416

>OPT9_ARATH (Q9FJD2) Probable oligopeptide transporter 9 (AtOPT9)|
          Length = 741

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 463 LFGGRQTWKQREESFKVNATMKVHCGFMKNS 555
           LF GR  WKQ   +F+ N  M  H   MK +
Sbjct: 383 LFNGRDLWKQTRGAFQRNKKMDFHTRIMKKN 413

>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)|
          Length = 2341

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -1

Query: 251 DGEAQDQRWKARRSSAQATA---ETTRSRGRAAPLRHAASPTPTPPLPRLAIGLPSLPRE 81
           +GE QD    A ++S +A +   E +  R +A   RH A   PTP  P L IG P   ++
Sbjct: 761 EGEEQDAVSGAAQASEEAVSFRRERSTFRRQAVRRRHNAGSNPTP--PTLLIGSPLSLQD 818

Query: 80  PEQ 72
            +Q
Sbjct: 819 GQQ 821

>OSTA_VIBCH (Q9KUR9) Organic solvent tolerance protein precursor|
          Length = 783

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -1

Query: 437 STVMYDSFFTISLGVL-FGMTTASGSSATGIEQRWSGLDGG 318
           +T +Y++ F+ ++G++ FG +  +GSS TG++   + L  G
Sbjct: 736 ATPIYENNFSFNIGIIGFGTSIGAGSSMTGVDSAGNSLGYG 776

>FTSK_SALTI (Q8Z814) DNA translocase ftsK|
          Length = 1343

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -1

Query: 437 STVMYDSFFTISL---GVLFGMTTASGSSATGIEQRWSGLDGGSIRSDARTTSPPFL 276
           ST  Y  +F +SL   GVL  + T+ G +A   +  W    GG I S   TT  P L
Sbjct: 102 STDDYIDYFAVSLRLIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLL 158

>YG3A_YEAST (P53278) Hypothetical 92.7 kDa protein in ASN2-PHB1 intergenic|
           region
          Length = 816

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
 Frame = -1

Query: 398 GVLFGMTT-ASGSSATGI----EQRWSGLDGGSIRSDARTTSPPFLQRAERK*ADGEAQD 234
           GVL   TT  SG S +G+    EQ+         +SD +  +PP  +  +   A+G+A++
Sbjct: 271 GVLEPRTTDQSGGSKSGVVPTDEQKEE-------KSDVKKVNPPSGEEKKEVEAEGDAEE 323

Query: 233 QRWKARRSSAQATAETTRSRGRAAP-LRHAASPTPTPPLPRLAIGLPS 93
           +     +SSA+ +AE T +   + P      SP      P++    PS
Sbjct: 324 E---TEQSSAEESAERTSTPETSEPESEEDESPIDPSKAPKVPFQEPS 368

>ZFHX2_HUMAN (Q9C0A1) Zinc finger homeobox protein 2|
          Length = 1427

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 161 PLRHAASPTPTPPLPRLAIGLPSLPREPEQ 72
           P + A +PTP PPLP L    PS    PE+
Sbjct: 838 PGKEATTPTPEPPLPLLPPPPPSEEEGPEE 867

>FTSK_SALTY (Q8ZQD5) DNA translocase ftsK|
          Length = 1351

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -1

Query: 437 STVMYDSFFTISL---GVLFGMTTASGSSATGIEQRWSGLDGGSIRSDARTTSPPFL 276
           ST  Y  +F +SL   GVL  + T+ G +A   +  W    GG I S   TT  P L
Sbjct: 102 STDDYIDYFAVSLRLIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLL 158

>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2|
          Length = 954

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
 Frame = -1

Query: 323 GGSIRSDARTTSPPFLQRAERK*ADGEAQ--DQRWKARRSSAQATAETTRSRGR--AAPL 156
           G  ++S + T  PP  +R + + A   A+   +  + RR +A +   +T S     AAP 
Sbjct: 28  GEFVKSASSTIEPPVARRLKAEFAKDNAKGDSKPVQQRRPAAPSAPASTSSSAPTPAAPA 87

Query: 155 R-------HAASPTPTPPLPRLAIGL-PSLP 87
           R       H  +PTP  P PR   G  P +P
Sbjct: 88  RQASPASAHQQAPTPGAPTPRPQGGARPGMP 118

>DHH1_GIBZE (Q4HW67) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)|
          Length = 486

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +1

Query: 76  SGSRGREGRPMARRGKGGVGVGDAAWRRGAARPR 177
           +G RGR GR    RG+GG G G     RG   PR
Sbjct: 453 NGGRGRGGRGRGYRGRGGQGQGG----RGRGPPR 482

>ZFY16_MOUSE (Q80U44) Zinc finger FYVE domain-containing protein 16 (Endofin)|
           (Endosomal-associated FYVE domain protein)
          Length = 1528

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 19/84 (22%), Positives = 35/84 (41%)
 Frame = -1

Query: 344 QRWSGLDGGSIRSDARTTSPPFLQRAERK*ADGEAQDQRWKARRSSAQATAETTRSRGRA 165
           Q+   LDG +  S   T    FLQ    K  +G+ + +       S ++  + + +    
Sbjct: 411 QKSDVLDGETDLSKKETCRSIFLQPVNEKKGEGKVEVEEMVISGESLESPEDASSAAAAG 470

Query: 164 APLRHAASPTPTPPLPRLAIGLPS 93
           +P+  +A+  P  P P   +  PS
Sbjct: 471 SPVALSAASVPEAPGPCEGLTFPS 494

>GGA1_MOUSE (Q8R0H9) ADP-ribosylation factor-binding protein GGA1|
           (Golgi-localized, gamma ear-containing, ARF-binding
           protein 1) (Gamma-adaptin-related protein 1)
          Length = 635

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = -1

Query: 245 EAQDQRWKARRSSAQATAETTRSRGR-----AAPLRHAASPTPTPPLPR 114
           EAQ  RW+ ++ + + T    +S+       AA L H  SP P  P P+
Sbjct: 437 EAQQVRWEKQQPAPRLTLRDLQSKSSSPSPGAASLLHTTSPEPPGPPPQ 485

>VE2_HPV21 (P50767) Regulatory protein E2|
          Length = 503

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/77 (25%), Positives = 36/77 (46%)
 Frame = -1

Query: 383 MTTASGSSATGIEQRWSGLDGGSIRSDARTTSPPFLQRAERK*ADGEAQDQRWKARRSSA 204
           +TTA+ ++ T       G   GS  + + T+  P      R+   G       + RRSS+
Sbjct: 316 ITTATTTTTTATNYSTRGSGRGSSSTSSSTSKRP------RRPRGGAIGGSSGRGRRSSS 369

Query: 203 QATAETTRSRGRAAPLR 153
            + + + RSRG++  +R
Sbjct: 370 TSPSPSKRSRGKSESVR 386

>SECD_STRCO (Q53955) Protein-export membrane protein secD|
          Length = 570

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 24/84 (28%), Positives = 39/84 (46%)
 Frame = -1

Query: 380 TTASGSSATGIEQRWSGLDGGSIRSDARTTSPPFLQRAERK*ADGEAQDQRWKARRSSAQ 201
           T  SG++ATG     S   G S ++  + T      +A  K  DG+      KA  + + 
Sbjct: 100 TELSGANATGTPSA-SETGGASDKATDKATD-----KATDKATDGDKATDGDKASGTPSD 153

Query: 200 ATAETTRSRGRAAPLRHAASPTPT 129
           + + +  S+GRAA     A P+P+
Sbjct: 154 SASASATSQGRAASDALKADPSPS 177

>DTX1_MOUSE (Q61010) Protein deltex-1 (Deltex-1) (Deltex1) (mDTX1) (FXI-T1)|
          Length = 627

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -1

Query: 212 SSAQATAETTRSRGRAAPLRHAASPTPTPPLPRLAIGLP 96
           S+  A+     S+ R AP+  AA P P PP P L  G P
Sbjct: 210 STRAASNAILASQRRKAPIAPAAPPAPPPPPPPLPPGGP 248


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,417,892
Number of Sequences: 219361
Number of extensions: 1302714
Number of successful extensions: 6757
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6724
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)