>CAC1F_HUMAN (O60840) Voltage-dependent L-type calcium channel alpha-1F subunit|
           (Voltage-gated calcium channel alpha subunit Cav1.4)
          Length = 1966

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 22/61 (36%), Positives = 33/61 (54%)
 Frame = +3

Query: 177 KVVPELVEPATAGVAEEVEFGACKEGEDVAVVGQERQEDAPKQGEEEKEAHGVRMIALLM 356
           K +P+  E    GV +E E GA +EG D+     E +E+  ++ EEE+E  G   + LL 
Sbjct: 769 KDLPQENEGLVPGVEKEEEEGARREGADM-----EEEEEEEEEEEEEEEEEGAGGVELLQ 823

Query: 357 E 359
           E
Sbjct: 824 E 824

>GS39_BACSU (P80873) General stress protein 39 (GSP39) (EC 1.-.-.-)|
          Length = 285

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = +3

Query: 162 DRCIGKVVPELVEPATAGVAEEVEFGACKEGEDVAVVGQERQEDAPKQGEEEKEAHGVRM 341
           D+  GKV   L+    +G+   V     KEG D+A+V ++  EDA ++ ++  E  GV+ 
Sbjct: 37  DKLKGKVA--LITGGDSGIGRAVSVAYAKEGADIAIVYKDEHEDA-EETKKRVEQEGVKC 93

Query: 342 IAL 350
           + +
Sbjct: 94  LLI 96

>NFL_COTJA (Q02916) Neurofilament triplet L protein (Neurofilament light|
           polypeptide) (NF-L)
          Length = 555

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 156 EEDRCIGKVVPELVEPATAGVAEEVEFGACKEGEDVAVV-GQERQEDAPKQGEEEKE 323
           EE+   G+   E  E A    +EE + G  +EGE+ A   G+E QE A + GEEEKE
Sbjct: 484 EEEEAGGEEAEEEEEGAKEE-SEEGKEGEEEEGEETAAEDGEESQETAEETGEEEKE 539

>CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1)|
            (ATP pyrophosphate-lyase) (Protein rutabaga)
          Length = 2248

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 23/93 (24%), Positives = 41/93 (44%)
 Frame = +3

Query: 69   LIQFHDHHQYMYGSSTGPFLPHHHGFISAEEDRCIGKVVPELVEPATAGVAEEVEFGACK 248
            L+  H H Q+       P  P HH     ++ R   K+  + +  A  G+    E G   
Sbjct: 1214 LLLQHQHKQHDPLPLPAPPPPVHHHLHQQQQQRLNSKLQKQPIFMANGGLPNIRENGNGH 1273

Query: 249  EGEDVAVVGQERQEDAPKQGEEEKEAHGVRMIA 347
             GE      Q++Q+   +Q +++++ HG  M+A
Sbjct: 1274 NGEHQQ---QQQQQQQHQQQQQQQQQHGGFMVA 1303

>UVRB_BACHD (Q9K6X9) UvrABC system protein B (Protein uvrB) (Excinuclease ABC|
           subunit B)
          Length = 660

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
 Frame = +3

Query: 165 RCIGKVVPELVEPATAGVAEEVEFGACKEGEDVAVVGQERQEDAPKQ--GEEEKEAHGVR 338
           + I K +P++++ ATA VAE+               G+E    APKQ   ++E+EA   R
Sbjct: 586 KTIEKRIPDVIK-ATAMVAED---------------GEEYTSHAPKQKMSKKEREAVIER 629

Query: 339 MIALLMECAVAMSVGNLADANGTLLEL 419
           M A + E A  ++    A+    +LEL
Sbjct: 630 MEAEMKEAAKTLNFERAAELRDLILEL 656

>CXA8_MOUSE (P28236) Gap junction alpha-8 protein (Connexin-50) (Cx50) (Lens|
           fiber protein MP70)
          Length = 439

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = +3

Query: 183 VPELVEPATAGVAEEVEFGACKEGEDVAVVGQERQEDAPKQGEEEKE---AHGVRMIALL 353
           + E VEP      +E E  A +  E VAV  +ER E      E+EKE   A  V    L 
Sbjct: 344 IEEAVEPEVGEKKQEAEKVAPEGQETVAVPDRERVETPGVGKEDEKEELQAEKVTKQGLS 403

Query: 354 MECAVAMSVGNLADANGTLLELSQMAS 434
            E A ++      D N  L  LS+ +S
Sbjct: 404 AEKAPSLCPELTTDDNRPLSRLSKASS 430

>Y543_VIBPA (Q87S81) Protein VP0543|
          Length = 308

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +3

Query: 201 PATAGVAEEVEFGACKEGEDVAVVGQERQEDAPKQGEEEKEA 326
           P T GV++++  G    G +  +  +E  ED+P+ GE++ +A
Sbjct: 92  PPTFGVSDKMVIGLIAGGPEAILKAKEGAEDSPQLGEQDLKA 133

>PTMS_HUMAN (P20962) Parathymosin|
          Length = 101

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 216 VAEEVEFGACKEGEDVAVVGQERQEDAPKQGEEEKE 323
           V EE E GA +E E+ A  G+E  E   +  EEE+E
Sbjct: 36  VVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEE 71

>PEP_DROME (P41073) Zinc finger protein on ecdysone puffs|
          Length = 716

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
 Frame = +3

Query: 156 EEDRCIGKVVPELVEPATAGVAEEVEFGACKE----------GEDVAVVGQERQEDAPKQ 305
           EE+    + V E   PA  G AEE   GA  E           EDV +V    + +   +
Sbjct: 540 EENERKKRKVEEAEAPAAEGAAEETTEGAEGELYDPSEATGDDEDVEMVDDNAEGEGEGE 599

Query: 306 GEEEKEA 326
           G+EE EA
Sbjct: 600 GDEEAEA 606

>RECF_PROAC (Q6ABL2) DNA replication and repair protein recF|
          Length = 394

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -1

Query: 158 LGADKAVVMGQERAGAAAVHVLVVIMELN 72
           LGAD+AVV G+ RAG      L++ +E+N
Sbjct: 63  LGADQAVVRGRVRAGTDDARSLLLEVEIN 91

>PTMS_BOVIN (P08814) Parathymosin|
          Length = 101

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 216 VAEEVEFGACKEGEDVAVVGQERQEDAPKQGEEEKE 323
           V EE E GA +E E+ A  G+E ++D  ++ EEE+E
Sbjct: 36  VVEEEENGAEEEEEETAEDGEE-EDDGDEEDEEEEE 70

>COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
          Length = 889

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 198 EPATAGVAEEVEFGACKEGEDVAVVGQERQEDAPKQGEEEKE 323
           E A      EVE    KE    AV  ++++E+AP+Q + E++
Sbjct: 833 EQADENKEAEVEDSEFKESNSEAVEAEKKEEEAPQQQQSEQQ 874

>TSPY1_BOVIN (O19110) Testis-specific Y-encoded protein 1 (bTSPY)|
          Length = 317

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +3

Query: 198 EPATAGVAEEVEFGACKEGEDVAVVGQERQEDAPKQGEEEK 320
           E   AG+  E +  A    E+V VV  E QE  P Q  EEK
Sbjct: 65  EGDVAGIGREFQLLAEDIVEEVEVVADEEQEQRPSQELEEK 105

>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 395

 Score = 24.6 bits (52), Expect(2) = 8.8
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 75  QFHDHHQYMYGSSTGPFLPHHH 140
           QFHDHHQ         F  HHH
Sbjct: 238 QFHDHHQ-----QKQQFHDHHH 254



 Score = 22.3 bits (46), Expect(2) = 8.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 51  HDSSLGLIQFHDHHQY 98
           HD      QFHDHH +
Sbjct: 193 HDHHQQQQQFHDHHHH 208

>RGL3_ARATH (Q9LF53) DELLA protein RGL3 (RGA-like protein 3)|
          Length = 523

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = +3

Query: 321 EAHGVRMIALLMECAVAMSVGNLADANGTLLELSQMASPYAPSCGE 458
           E  GVR++  L+ CA A+ + NL+ A+  +  +  +A+  A + G+
Sbjct: 151 EETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGK 196

>NFM_CHICK (P16053) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
          Length = 857

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 216 VAEEVEFGACKEGEDVAVVGQ-ERQEDAPKQGEEEKEAHGV 335
           V  EVE       ED+AV G+ E ++D  K+ E E+E  GV
Sbjct: 738 VTAEVEVSKEARKEDIAVNGEVEEKKDEAKEKEAEEEEKGV 778


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,716,712
Number of Sequences: 219361
Number of extensions: 903242
Number of successful extensions: 3952
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3930
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)