Clone Information

BLAST Search Result

Clone Name	bart43g07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TYRP_SHIFL (P0AAD5) Tyrosine-specific transport protein (Tyrosin...	37	0.012
2	TYRP_ECOLI (P0AAD4) Tyrosine-specific transport protein (Tyrosin...	37	0.012
3	AVT1_YEAST (P47082) Vacuolar amino acid transporter 1	33	0.17
4	AVT6_YEAST (P40074) Vacuolar amino acid transporter 6	33	0.22
5	TYRPA_HAEIN (P44727) Tyrosine-specific transport protein 1 (Tyro...	33	0.22
6	TYRPB_HAEIN (P44747) Tyrosine-specific transport protein 2 (Tyro...	32	0.38
7	RL1_OCEIH (Q8ETZ2) 50S ribosomal protein L1	32	0.38
8	Y389_CLOPE (P30818) Putative amino acid transporter CPE0389	32	0.38
9	AVT5_YEAST (P38176) Vacuolar amino acid transporter 5	32	0.38
10	ACH10_CHICK (Q9I8C7) Neuronal acetylcholine receptor protein, al...	32	0.38
11	Y460_MYCPN (P75323) Hypothetical protein MG322 homolog (H08_orf565)	31	0.84
12	CSTA_BACSU (P94532) Carbon starvation protein A homolog	30	1.9
13	GCSP_NITWN (Q3ST46) Glycine dehydrogenase [decarboxylating] (EC ...	30	1.9
14	YSPK_CAEEL (Q19425) Hypothetical protein F13H10.3 in chromosome IV	29	2.5
15	NORM_VIBCH (Q9KRU4) Multidrug resistance protein norM (Na(+)/dru...	29	2.5
16	POTE_ECOLI (P0AAF1) Putrescine-ornithine antiporter (Putrescine ...	29	2.5
17	POTE_ECOL6 (P0AAF2) Putrescine-ornithine antiporter (Putrescine ...	29	2.5
18	TUTB_ENTAG (Q47825) Tyrosine permease	29	2.5
19	POTE_HAEIN (P44768) Putrescine-ornithine antiporter (Putrescine ...	29	2.5
20	LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like ...	27	2.6
21	MTR_SHIFL (P0AAD3) Tryptophan-specific transport protein (Trypto...	29	3.2
22	MTR_ECOLI (P0AAD2) Tryptophan-specific transport protein (Trypto...	29	3.2
23	LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4	29	3.2
24	G6PI_ACILW (Q9RMC1) Glucose-6-phosphate isomerase (EC 5.3.1.9) (...	29	3.2
25	REC1_USTMA (P14746) DNA repair exonuclease REC1 (EC 3.1.11.2)	28	4.2
26	GBP_PSESE (Q27913) Growth-blocking peptide precursor (GBP)	28	4.2
27	RL1_SELRU (Q84IF4) 50S ribosomal protein L1	28	4.2
28	NU5M_CRYNV (Q85T01) NADH-ubiquinone oxidoreductase chain 5 (EC 1...	28	5.5
29	ARCD_SHIFL (P0AAE7) Putative arginine/ornithine antiporter	28	5.5
30	ARCD_ECOLI (P0AAE5) Putative arginine/ornithine antiporter	28	5.5
31	ARCD_ECOL6 (P0AAE6) Putative arginine/ornithine antiporter	28	5.5
32	HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant prot...	28	5.5
33	SYA_NATPD (Q3ITT7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	28	5.5
34	GCX1_RAT (Q76IQ7) Granulosa cell HMG box protein 1 (GCX-1)	28	5.5
35	ADA2B_ECHTE (O77723) Alpha-2B adrenergic receptor (Alpha-2B adre...	28	5.5
36	MTR_NEUCR (P38680) N amino acid transport system protein (Methyl...	28	7.2
37	LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like ...	28	7.2
38	TRPS1_HUMAN (Q9UHF7) Zinc finger transcription factor Trps1 (Zin...	28	7.2
39	YEDZ_SALTY (Q8ZLP1) UPF0191 membrane protein yedZ	28	7.2
40	YEDZ_SALTI (Q8Z3D4) UPF0191 membrane protein yedZ	28	7.2
41	RL1_STAES (Q8CTT4) 50S ribosomal protein L1	28	7.2
42	RL1_STAEQ (Q5HRL4) 50S ribosomal protein L1	28	7.2
43	GCSP_RHOPA (Q6N344) Glycine dehydrogenase [decarboxylating] (EC ...	28	7.2
44	LATS2_MOUSE (Q7TSJ6) Serine/threonine-protein kinase LATS2 (EC 2...	27	9.3
45	RL1_LACLA (Q9CE47) 50S ribosomal protein L1	27	9.3
46	RL1_ENTFA (Q830Q6) 50S ribosomal protein L1	27	9.3
47	LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like ...	27	9.3
48	AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx ca...	27	9.3
49	LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like ...	27	9.3
50	HRH3_RAT (Q9QYN8) Histamine H3 receptor (HH3R)	27	9.3
51	HRH3_MOUSE (P58406) Histamine H3 receptor (HH3R)	27	9.3
52	HRH3_HUMAN (Q9Y5N1) Histamine H3 receptor (HH3R) (G-protein coup...	27	9.3
53	KCNA5_RABIT (P50638) Potassium voltage-gated channel subfamily A...	27	9.3
54	SC5A5_RAT (Q63008) Sodium/iodide cotransporter (Na(+)/I(-) cotra...	27	9.3
55	YEDZ_SHIFL (Q83KM2) UPF0191 membrane protein yedZ	27	9.3
56	YEDZ_ECOLI (P76343) UPF0191 membrane protein yedZ	27	9.3
57	YEDZ_ECOL6 (Q8FGI6) UPF0191 membrane protein yedZ	27	9.3

>TYRP_SHIFL (P0AAD5) Tyrosine-specific transport protein (Tyrosine permease)|
          Length = 403

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 17/55 (30%), Positives = 32/55 (58%)
 Frame = +2

Query: 176 SAFHNVTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHEMVP 340
           S F      +GAG+L++P A + +G+   + +LI  W +  YT   ++E+++ VP
Sbjct: 8   SVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVP 62

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>TYRP_ECOLI (P0AAD4) Tyrosine-specific transport protein (Tyrosine permease)|
          Length = 403

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 17/55 (30%), Positives = 32/55 (58%)
 Frame = +2

Query: 176 SAFHNVTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHEMVP 340
           S F      +GAG+L++P A + +G+   + +LI  W +  YT   ++E+++ VP
Sbjct: 8   SVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVP 62

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>AVT1_YEAST (P47082) Vacuolar amino acid transporter 1|
          Length = 602

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 182 FHNVTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYT 304
           F+++  ++G G+L+LP  +   GW  G+ +L I  + T  T
Sbjct: 215 FNSINVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCT 255

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>AVT6_YEAST (P40074) Vacuolar amino acid transporter 6|
          Length = 448

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 206 GAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHEMVPGKR 349
           GAG+L++P+A    G  PG+ ++++     + +L+    + + VP  R
Sbjct: 18  GAGILAMPYAFKPFGLIPGVIMIVLCGACAMQSLFIQARVAKYVPQGR 65

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>TYRPA_HAEIN (P44727) Tyrosine-specific transport protein 1 (Tyrosine permease|
           1)
          Length = 400

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 12/44 (27%), Positives = 28/44 (63%)
 Frame = +2

Query: 200 MVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHE 331
           M+GAG+L++P   + +G+G  + +L+  W +  ++    VE+++
Sbjct: 15  MIGAGMLAMPLTSAGIGFGFTLVLLLGLWALLTFSALLFVELYQ 58

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>TYRPB_HAEIN (P44747) Tyrosine-specific transport protein 2 (Tyrosine permease|
           2)
          Length = 406

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 12/43 (27%), Positives = 28/43 (65%)
 Frame = +2

Query: 203 VGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHE 331
           +GAG+L++P   + +G+G  + +L+  W + +Y+    VE+++
Sbjct: 18  IGAGMLAMPLTSAGMGFGYTLLLLVGLWALLVYSGLLFVEVYQ 60

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>RL1_OCEIH (Q8ETZ2) 50S ribosomal protein L1|
          Length = 230

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
 Frame = +2

Query: 38  KAGRQKMGTQAAENVHPPAKDVRTDEQKKIDDCLPITSS------RNAKWWYSAFHNVTA 199
           KAG+ +     + N+H P   +  D+QK +D+ + +T        +++K  Y    ++T+
Sbjct: 157 KAGKVEYRVDKSANIHVPIGKISFDDQKLVDNFVALTEQLVKVKPQSSKGIYMKNASITS 216

Query: 200 MVGAGV 217
            +G G+
Sbjct: 217 TMGPGI 222

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>Y389_CLOPE (P30818) Putative amino acid transporter CPE0389|
          Length = 481

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +2

Query: 191 VTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHEMVPGKRFD 355
           ++AM+G GV +LP  M++         ++ISW++T   +W +     ++   R D
Sbjct: 17  ISAMLGGGVYNLPQNMAQ---SASAGAILISWIITGIGIWFIANTFRILAAARPD 68

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>AVT5_YEAST (P38176) Vacuolar amino acid transporter 5|
          Length = 509

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 206 GAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHEMVP 340
           GAGVL++PFA    G  PG+  L    + +L  L     + + VP
Sbjct: 68  GAGVLAMPFAFKPFGLMPGLITLTFCGICSLCGLLLQTRIAKYVP 112

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>ACH10_CHICK (Q9I8C7) Neuronal acetylcholine receptor protein, alpha-10 subunit|
           precursor (Nicotinic acetylcholine receptor subunit
           alpha 10) (NACHR alpha 10) (Alpha 10 nAChR)
          Length = 452

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = +1

Query: 40  GRPAENGDAGSGERPPAGKGCQDR*AKEDR*LPPDHVVEERQVVVLGLPQCHRHGWRGSA 219
           GRP   G  G G R P G+G +       R L   H V      + G+ + HR   R +A
Sbjct: 360 GRPQREGTGGMGPRDPPGEGVEPGLCPRSRCLCHHHAVLSSVGYIAGVFRRHRTAQRRAA 419

Query: 220 Q 222
           +
Sbjct: 420 E 420

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>Y460_MYCPN (P75323) Hypothetical protein MG322 homolog (H08_orf565)|
          Length = 565

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = +2

Query: 65  QAAENVHPPAKDVRTDEQKKIDDCLPITSSRNAKWWYSAFHNVTAMVGAGVLSL---PFA 235
           Q++  V    K +  D  K+    LP+  + N  + Y  FH+++A+  AG+  L    FA
Sbjct: 199 QSSGKVSNQLKALIVDSTKR----LPVVHNLNLAFQYGFFHSLSAVNNAGIDLLGANSFA 254

Query: 236 MSELGWGPGIAVLIISWVV 292
                WG  I  L IS ++
Sbjct: 255 PYRTNWGIVIQWLAISQII 273

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>CSTA_BACSU (P94532) Carbon starvation protein A homolog|
          Length = 598

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVV 292
           W S  H+  A+  AG L  P   ++ G+ PG+  L+I  V+
Sbjct: 55  WVSFGHHFAAIAAAGPLVGPILAAQFGYLPGLLWLLIGAVI 95

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>GCSP_NITWN (Q3ST46) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
            (Glycine decarboxylase) (Glycine cleavage system
            P-protein)
          Length = 954

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
 Frame = +2

Query: 8    IPLLNSIAQDKAGRQKMGTQ----AAENVHPPAKDVRTDEQKKIDDCLPITSSRNAKWW 172
            I +   IA+ +AGR K+       A    H  A D  +    +   C P  SSR+ K+W
Sbjct: 866  IAIRQEIAEIEAGRWKVEASPLRHAPHTAHDIADDAWSRPYSRAQGCFPSGSSRSDKYW 924

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>YSPK_CAEEL (Q19425) Hypothetical protein F13H10.3 in chromosome IV|
          Length = 615

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +2

Query: 200 MVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVE 322
           M+G  +L++P+A+ + G   GI +++    +  YT + ++E
Sbjct: 176 MMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIE 216

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>NORM_VIBCH (Q9KRU4) Multidrug resistance protein norM (Na(+)/drug antiporter)|
           (Multidrug-efflux transporter)
          Length = 457

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 230 FAMSELGW-GPGIAVLIISWVVTLYTLWQMVEMHEMVPGKRFDRYH 364
           F   ELG  G G+A  I+ W++ L  L+ +V    +   K F+ +H
Sbjct: 182 FGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFH 227

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>POTE_ECOLI (P0AAF1) Putrescine-ornithine antiporter (Putrescine transport|
           protein)
          Length = 439

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 200 MVGAGVLSLPFAMSELGWGPGIAVLIISWVVT 295
           M+G+G++ LP  ++E+G      + IISW+VT
Sbjct: 22  MMGSGIIMLPTKLAEVG-----TISIISWLVT 48

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>POTE_ECOL6 (P0AAF2) Putrescine-ornithine antiporter (Putrescine transport|
           protein)
          Length = 439

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 200 MVGAGVLSLPFAMSELGWGPGIAVLIISWVVT 295
           M+G+G++ LP  ++E+G      + IISW+VT
Sbjct: 22  MMGSGIIMLPTKLAEVG-----TISIISWLVT 48

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>TUTB_ENTAG (Q47825) Tyrosine permease|
          Length = 416

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +2

Query: 191 VTAMVGAGVLSLPFAMSELGWGPGIAVLI-ISWVVTLYTLWQMVEMH 328
           +  ++G G+ SLP AM+ + W PG ++++ +  ++ L T   +VE++
Sbjct: 18  IATVIGGGMFSLPIAMAGI-WFPGASIILTLIAIMMLLTGLMLVEVN 63

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>POTE_HAEIN (P44768) Putrescine-ornithine antiporter (Putrescine transport|
           protein)
          Length = 435

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 200 MVGAGVLSLPFAMSELGWGPGIAVLIISWVVT 295
           M+G+G++ LP  ++E+G      + I+SW+VT
Sbjct: 21  MMGSGIIMLPTKLAEIG-----TISIVSWLVT 47

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>LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like protein 1)|
          Length = 488

 Score = 26.9 bits (58), Expect(2) = 2.6
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAVLII-----SWVVTLYTL 307
           W+S   N  A V   +L+LP++ S+LG   GI + I      SW   L ++
Sbjct: 57  WFSCASNQVAQV---LLTLPYSFSQLGMLSGILLQIFYGLMGSWTAYLISV 104



 Score = 20.8 bits (42), Expect(2) = 2.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 43  RPAENGDAGSGERPPAGKGCQDR*AKED 126
           + AE     SGE   AG+  +D  A+ED
Sbjct: 5   KQAEESIVVSGEDEVAGRKVEDSAAEED 32

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>MTR_SHIFL (P0AAD3) Tryptophan-specific transport protein (Tryptophan|
           permease)
          Length = 414

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 200 MVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVE 322
           ++GAG+ SLP  MS   +   +A LI +W   L++   ++E
Sbjct: 24  IIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGLMILE 64

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>MTR_ECOLI (P0AAD2) Tryptophan-specific transport protein (Tryptophan|
           permease)
          Length = 414

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 200 MVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVE 322
           ++GAG+ SLP  MS   +   +A LI +W   L++   ++E
Sbjct: 24  IIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGLMILE 64

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>LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4|
          Length = 480

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAV-----LIISWVVTLYTL 307
           W+S   N  A V   +L+LP++ S+LG   G+A      L+ SW   L ++
Sbjct: 59  WFSCASNQVAQV---LLTLPYSFSQLGMASGVAFQVFYGLMGSWTAYLISV 106

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>G6PI_ACILW (Q9RMC1) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 557

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 212 GVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMV 319
           GV + P  MSE G  P   +L+  WV   Y+LW  +
Sbjct: 248 GVSTKPDKMSEWGIAPENQLLLWDWVGGRYSLWSCI 283

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>REC1_USTMA (P14746) DNA repair exonuclease REC1 (EC 3.1.11.2)|
          Length = 522

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 25  HCSRQGRPAENGDAGSGERPPAGKGCQ 105
           H S  G P    + GS E PP G+G Q
Sbjct: 176 HSSSSGLPGFRPEQGSAEAPPGGRGYQ 202

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>GBP_PSESE (Q27913) Growth-blocking peptide precursor (GBP)|
          Length = 143

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 17  LNSIAQDKAGRQKMGTQAAENVHPPAKDVRTDEQKKIDDCLPITSS 154
           LNS+       Q+    A+ N+H    +  TD  KK D+  P T++
Sbjct: 46  LNSLFHPNDKNQQGNNDASSNIHFADSEENTDAAKKPDEVTPATTT 91

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>RL1_SELRU (Q84IF4) 50S ribosomal protein L1|
          Length = 226

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = +2

Query: 14  LLNSIAQDKAGRQKMGTQAAENVHPPAKDVRTDEQK------KIDDCLPITSSRNAKWWY 175
           L  ++++ KAG+ +  T  A NVH P      D +K       + D L       AK  Y
Sbjct: 149 LTKAVSEIKAGKVEYRTDKAGNVHCPIGKASFDAEKLQQNFQALIDTLNRVKPAAAKGQY 208

Query: 176 SAFHNVTAMVGAGV 217
                V+A +G G+
Sbjct: 209 MRSITVSATMGPGI 222

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>NU5M_CRYNV (Q85T01) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3)|
          Length = 662

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 16/81 (19%)
 Frame = +2

Query: 143 ITSSRNAKWWYSAFHN-------------VTAMVGAGVLSL--PFAMSELGWGPGIAVLI 277
           + S  NAKW++ A +N             ++ ++  G++ L  P+ +S +  G G +V  
Sbjct: 546 VYSFLNAKWYWDALYNGLIIESGLRIGLVISKVIDRGIIELTGPYGLSTVLTGAGRSVAT 605

Query: 278 I-SWVVTLYTLWQMVEMHEMV 337
             + V+T Y L+ M+ +  ++
Sbjct: 606 YDTGVITSYALYIMLGLVSLI 626

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>ARCD_SHIFL (P0AAE7) Putative arginine/ornithine antiporter|
          Length = 460

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 9/47 (19%)
 Frame = +2

Query: 191 VTAMVGAGVLSLPFAMSE--------LGWG-PGIAVLIISWVVTLYT 304
           +++M+GAGV SLP  M+         +GWG  G  +L++++ + + T
Sbjct: 15  LSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILT 61

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>ARCD_ECOLI (P0AAE5) Putative arginine/ornithine antiporter|
          Length = 460

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 9/47 (19%)
 Frame = +2

Query: 191 VTAMVGAGVLSLPFAMSE--------LGWG-PGIAVLIISWVVTLYT 304
           +++M+GAGV SLP  M+         +GWG  G  +L++++ + + T
Sbjct: 15  LSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILT 61

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>ARCD_ECOL6 (P0AAE6) Putative arginine/ornithine antiporter|
          Length = 460

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 9/47 (19%)
 Frame = +2

Query: 191 VTAMVGAGVLSLPFAMSE--------LGWG-PGIAVLIISWVVTLYT 304
           +++M+GAGV SLP  M+         +GWG  G  +L++++ + + T
Sbjct: 15  LSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILT 61

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>HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant protein 1 precursor|
          Length = 1802

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +2

Query: 8    IPLLNSIAQDKAGRQKMGTQAAENVHPPAKDVRTDEQKKIDDCLPITSSRNA 163
            I  L+ + + K  ++K  T++ E++HPP  D  +   KKI   +P+  S  A
Sbjct: 1326 ISSLSVVKKKKNQQKKNATKSTEDLHPPQVDTSSIAVKKI---VPMVDSSKA 1374

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>SYA_NATPD (Q3ITT7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 932

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 98  PLPAGGRSPLPASPFSAGRPCLEQWSLTEV 9
           PL   G +P PA+P +  +PC+    +  V
Sbjct: 107 PLVTSGETPPPANPLTISQPCIRMQDIDNV 136

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>GCX1_RAT (Q76IQ7) Granulosa cell HMG box protein 1 (GCX-1)|
          Length = 473

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 119 FAHLS*HPLPAGGRSPLPASPFSAG 45
           F H+S  P  +G RSP P++P S+G
Sbjct: 411 FPHISDFPSGSGSRSPGPSNPSSSG 435

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>ADA2B_ECHTE (O77723) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 384

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = -1

Query: 86  GGRSPLPASPFSAGRPCLEQWSLTEVYV 3
           GG   LPASP S G P L+Q   T V V
Sbjct: 286 GGPEALPASPASXGSPQLQQPQGTRVLV 313

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>MTR_NEUCR (P38680) N amino acid transport system protein (Methyltryptophan|
           resistance protein)
          Length = 470

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 191 VTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYT 304
           +   +  G LSLP A + LG  PG+ + +   ++ +YT
Sbjct: 63  IVEAIALGSLSLPGAFATLGMVPGVILSVGMGLICIYT 100

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>LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like protein 4)|
           (MtLAX4)
          Length = 482

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAV-----LIISWVVTLYTL 307
           W+S   N  A V   +L+LP++ S+LG   GI       LI SW   L ++
Sbjct: 52  WFSCASNQVAQV---LLTLPYSFSQLGMVSGIVFQIFYGLIGSWTAYLISV 99

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>TRPS1_HUMAN (Q9UHF7) Zinc finger transcription factor Trps1 (Zinc finger protein|
            GC79) (Tricho-rhino-phalangeal syndrome type I protein)
          Length = 1281

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
 Frame = +1

Query: 22   LHCSRQGRPAENGDAGSGERPPAGKGCQDR*---------AKEDR*LPPDHVVEERQVVV 174
            LH   +      GD G+      GKG  +R          AK     PP   +E+ Q  +
Sbjct: 1035 LHIQIKSPQESTGDPGNSSSVSEGKGSSERGSPIEKYMRPAKHPNYSPPGSPIEKYQYPL 1094

Query: 175  LGLPQCH 195
             GLP  H
Sbjct: 1095 FGLPFVH 1101

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>YEDZ_SALTY (Q8ZLP1) UPF0191 membrane protein yedZ|
          Length = 199

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHEMVPGKR 349
           W +      A++  G+ +L    SEL   P + + IISW+V L       +  +   GKR
Sbjct: 87  WATLHLTSYALLELGIHNLALLGSELISRPYLTLGIISWLVLLALTLTSTQFAQRKLGKR 146

Query: 350 FDRYH 364
           +   H
Sbjct: 147 WQTLH 151

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>YEDZ_SALTI (Q8Z3D4) UPF0191 membrane protein yedZ|
          Length = 199

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHEMVPGKR 349
           W +      A++  G+ +L    SEL   P + + IISW+V L       +  +   GKR
Sbjct: 87  WATLHLTSYALLELGIHNLALLGSELISRPYLTLGIISWLVLLALTLTSTQFAQRKLGKR 146

Query: 350 FDRYH 364
           +   H
Sbjct: 147 WQTLH 151

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>RL1_STAES (Q8CTT4) 50S ribosomal protein L1|
          Length = 231

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
 Frame = +2

Query: 23  SIAQDKAGRQKMGTQAAENVHPPAKDVRTDEQKKID------DCLPITSSRNAKWWYSAF 184
           ++ + KAG+ +   + A  VH     V  DE+K +D      D L      +AK  Y   
Sbjct: 152 AVEEIKAGKVEYRAEKAGIVHASIGKVSFDEEKLVDNFRTLQDVLAKAKPASAKGTYFKS 211

Query: 185 HNVTAMVGAGV 217
             VT  +G GV
Sbjct: 212 VAVTTTMGPGV 222

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>RL1_STAEQ (Q5HRL4) 50S ribosomal protein L1|
          Length = 231

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
 Frame = +2

Query: 23  SIAQDKAGRQKMGTQAAENVHPPAKDVRTDEQKKID------DCLPITSSRNAKWWYSAF 184
           ++ + KAG+ +   + A  VH     V  DE+K +D      D L      +AK  Y   
Sbjct: 152 AVEEIKAGKVEYRAEKAGIVHASIGKVSFDEEKLVDNFRTLQDVLAKAKPASAKGTYFKS 211

Query: 185 HNVTAMVGAGV 217
             VT  +G GV
Sbjct: 212 VAVTTTMGPGV 222

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>GCSP_RHOPA (Q6N344) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
            (Glycine decarboxylase) (Glycine cleavage system
            P-protein)
          Length = 990

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
 Frame = +2

Query: 8    IPLLNSIAQDKAGRQKMGTQAAENVHPPAKDVRTDE----QKKIDDCLPITSSRNAKWW 172
            I +   IAQ +AGR  +      +    A DV + E      + + C P  +SR  K+W
Sbjct: 896  IAIRREIAQVEAGRYPIEQSPLRHAPHTAHDVTSAEWTRPYPRTEGCFPAPNSRTDKYW 954

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>LATS2_MOUSE (Q7TSJ6) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large|
            tumor suppressor homolog 2) (Serine/threonine-protein
            kinase kpm) (Kinase phosphorylated during mitosis
            protein)
          Length = 1042

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 28   CSRQGRPAENGDAGSGERPPAGKGCQ 105
            C +   PAE+ D G  +   A +GCQ
Sbjct: 1013 CPKPSEPAESADPGDADLEGAAEGCQ 1038

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>RL1_LACLA (Q9CE47) 50S ribosomal protein L1|
          Length = 229

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
 Frame = +2

Query: 23  SIAQDKAGRQKMGTQAAENVHPPAKDVRTDEQKKIDDCLPITS------SRNAKWWYSAF 184
           ++ + KAG+       A NVH P   V  D +K +++   + S         +K  Y   
Sbjct: 152 AVEESKAGKVNYRADKAGNVHVPIGKVSFDTEKLVENFKALNSVIAAAKPAASKGAYITN 211

Query: 185 HNVTAMVGAGV 217
            +VT  +G GV
Sbjct: 212 LSVTTTMGPGV 222

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>RL1_ENTFA (Q830Q6) 50S ribosomal protein L1|
          Length = 229

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
 Frame = +2

Query: 23  SIAQDKAGRQKMGTQAAENVHPPAKDVRTDEQK------KIDDCLPITSSRNAKWWYSAF 184
           ++ + KAG+       A N+H P   V  D +K       I+D L       AK  Y   
Sbjct: 152 AVEEVKAGKVTYRVDKAGNIHVPIGKVSFDNEKLVENFNTINDVLLKAKPSTAKGQYIKN 211

Query: 185 HNVTAMVGAGV 217
            +VT   G G+
Sbjct: 212 ISVTTTFGPGI 222

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>LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like protein 1)|
           (MtLAX1)
          Length = 479

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
 Frame = +2

Query: 35  DKAGRQKMGTQAAENVHPPAKDVRTDEQKKIDDCLPITSSRNAKW--------WYSAFHN 190
           +K G + M +   E +         +E+++     P +  +N  W        W+S   N
Sbjct: 4   EKQGEETMMSSLNETIE------LNEEREEEKGASPGSGFKNFLWHGGSVYDAWFSCASN 57

Query: 191 VTAMVGAGVLSLPFAMSELGWGPGIAV-----LIISWVVTLYTL 307
             A V   +L+LP++ S+LG   GI       L+ SW   L ++
Sbjct: 58  QVAQV---LLTLPYSFSQLGMISGIIFQVFYGLMGSWTAYLISI 98

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>AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx carrier protein|
           1) (Polar auxin transport inhibitor resistant protein 1)
          Length = 485

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAV-----LIISWVVTLYTL 307
           W+S   N  A V   +L+LP++ S+LG   GI +     L+ SW   L ++
Sbjct: 52  WFSCASNQVAQV---LLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISV 99

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>LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like protein 2)|
           (MtLAX2)
          Length = 484

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLW 310
           W+S   N  A V   +L+LP++ S+LG   GI + +   ++  +T +
Sbjct: 52  WFSCASNQVAQV---LLTLPYSFSQLGMLSGILLQVFYGILGSWTAY 95

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>HRH3_RAT (Q9QYN8) Histamine H3 receptor (HH3R)|
          Length = 445

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -3

Query: 165 LAFL-DDVIGRQSSIFFCSSVLTSFAGGWTFSAACVPIFCRPALS*AMEFNRGIC 4
           LAF+ D  +  Q++ F  +  ++ F  G    A C+P++    L+    F RG+C
Sbjct: 57  LAFVADSSLRTQNNFFLLNLAISDFLVG----AFCIPLYVPYVLTGRWTFGRGLC 107

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>HRH3_MOUSE (P58406) Histamine H3 receptor (HH3R)|
          Length = 445

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -3

Query: 165 LAFL-DDVIGRQSSIFFCSSVLTSFAGGWTFSAACVPIFCRPALS*AMEFNRGIC 4
           LAF+ D  +  Q++ F  +  ++ F  G    A C+P++    L+    F RG+C
Sbjct: 57  LAFVADSSLRTQNNFFLLNLAISDFLVG----AFCIPLYVPYVLTGRWTFGRGLC 107

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>HRH3_HUMAN (Q9Y5N1) Histamine H3 receptor (HH3R) (G-protein coupled receptor|
           97)
          Length = 445

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -3

Query: 165 LAFL-DDVIGRQSSIFFCSSVLTSFAGGWTFSAACVPIFCRPALS*AMEFNRGIC 4
           LAF+ D  +  Q++ F  +  ++ F  G    A C+P++    L+    F RG+C
Sbjct: 57  LAFVADSSLRTQNNFFLLNLAISDFLVG----AFCIPLYVPYVLTGRWTFGRGLC 107

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>KCNA5_RABIT (P50638) Potassium voltage-gated channel subfamily A member 5|
           (Voltage-gated potassium channel subunit Kv1.5)
          Length = 598

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 28  CSRQGRPAENGDAGSGERPPAGKGCQDR*AKE--DR*LPP 141
           CS+    A  GD GS E  P G+GC  R   E  +R LPP
Sbjct: 26  CSQAAPTAGLGD-GSQEPAPRGRGCSARRGAEPGERPLPP 64

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>SC5A5_RAT (Q63008) Sodium/iodide cotransporter (Na(+)/I(-) cotransporter)|
           (Sodium-iodide symporter) (Na(+)/I(-)-symporter)
          Length = 618

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -3

Query: 360 YLSNRFPGTISCISTICHSV*SVTTHEMISTAIPGPQP 247
           +L+  + GT+S  ST  +++ +VT  ++I   +PG  P
Sbjct: 343 FLACAYSGTLSTASTSINAMAAVTVEDLIKPRMPGLAP 380

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>YEDZ_SHIFL (Q83KM2) UPF0191 membrane protein yedZ|
          Length = 211

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHEMVPGKR 349
           W +      A++  GV +L     EL   P + + IISWV+ L   +   +  +   GK 
Sbjct: 87  WATLHLTSYALLELGVNNLALLGKELITRPYLTLGIISWVILLALAFTSTQSMQRKLGKH 146

Query: 350 FDRYH 364
           + + H
Sbjct: 147 WQQLH 151

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>YEDZ_ECOLI (P76343) UPF0191 membrane protein yedZ|
          Length = 211

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHEMVPGKR 349
           W +      A++  GV +L     EL   P + + IISWV+ L   +   +  +   GK 
Sbjct: 87  WATLHLTSYALLELGVNNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKH 146

Query: 350 FDRYH 364
           + + H
Sbjct: 147 WQQLH 151

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>YEDZ_ECOL6 (Q8FGI6) UPF0191 membrane protein yedZ|
          Length = 211

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = +2

Query: 170 WYSAFHNVTAMVGAGVLSLPFAMSELGWGPGIAVLIISWVVTLYTLWQMVEMHEMVPGKR 349
           W +      A++  GV +L     EL   P + + IISWV+ L   +   +  +   GK 
Sbjct: 87  WATLHLTSYALLELGVNNLALLGKELITRPYLTLGIISWVILLALAFTSTQSMQRKLGKH 146

Query: 350 FDRYH 364
           + + H
Sbjct: 147 WQQLH 151


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,108,637
Number of Sequences: 219361
Number of extensions: 938829
Number of successful extensions: 3670
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 3498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3666
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result