ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart43c06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 942 bits (475), Expect = 0.0 Identities = 478/479 (99%) Strand = Plus / Plus Query: 23 ctcggccattgcttctagtagtactagccaagccattgtttctagaagtaacagaggagg 82 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcggccattgtttctagtagtactagccaagccattgtttctagaagtaacagaggagg 60 Query: 83 aggaagagaggccggcgaaatgaaggctaccgcgggggccctcctcgccgtggtggccac 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggaagagaggccggcgaaatgaaggctaccgcgggggccctcctcgccgtggtggccac 120 Query: 143 ggtgctactgcgaggcatcgcggcagcgccgccccggaagccggtggacgtgccattcga 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggtgctactgcgaggcatcgcggcagcgccgccccggaagccggtggacgtgccattcga 180 Query: 203 gaagaactacgtcccgacatgggcggaggaccacatccactacgtgaacggcggacggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gaagaactacgtcccgacatgggcggaggaccacatccactacgtgaacggcggacggga 240 Query: 263 ggtgcagctgtccctcgacaagaccaccggcactggcttccagacccggggctcctacct 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggtgcagctgtccctcgacaagaccaccggcactggcttccagacccggggctcctacct 300 Query: 323 cttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcac 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcac 360 Query: 383 cgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggg 420 Query: 443 gaacaggacggggcagccgtacatcctgcagacgaacgtgttctccggcgggaagggcg 501 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gaacaggacggggcagccgtacatcctgcagacgaacgtgttctccggcgggaagggcg 479
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 632 bits (319), Expect = e-178 Identities = 406/434 (93%), Gaps = 7/434 (1%) Strand = Plus / Plus Query: 72 aacagaggaggaggaagagaggccggc----gaaatgaaggctaccgcgggggccctcct 127 ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 10 aacagagaaggaggaagagaggccggccggcgaaatgaaggcgaccgcgggggccctcct 69 Query: 128 cgccgtggtggccacggtgctactgcgaggcatcgcggcagcgccgccccggaagccggt 187 |||||||||||| ||||||| || || ||| | ||||||||||| |||||||||||| Sbjct: 70 cgccgtggtggcggcggtgctgctacgcggcgtggcggcagcgcc---ccggaagccggt 126 Query: 188 ggacgtgccattcgagaagaactacgtcccgacatgggcggaggaccacatccactacgt 247 ||||||||| ||||| ||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 127 ggacgtgccgttcgacaagaactacgtgccgacgtgggcgcaggaccacatccactacgt 186 Query: 248 gaacggcggacgggaggtgcagctgtccctcgacaagaccaccggcactggcttccagac 307 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 187 gaacggcgggcgggaggtgcagctgtccctggacaagaccaccggcacgggcttccagac 246 Query: 308 ccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactc 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactc 306 Query: 368 cgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcga 427 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 307 cgccggcaccgtcaccgccttctacctgtcgtcacagaactcggagcacgacgagatcga 366 Query: 428 cttcgagttcttggggaacaggacggggcagccgtacatcctgcagacgaacgtgttctc 487 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 367 cttcgagttcttggggaacaggacggggcagccgtacatcctgcagaccaacgtgttctc 426 Query: 488 cggcgggaagggcg 501 |||||| ||||||| Sbjct: 427 cggcggcaagggcg 440
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Plus Query: 172 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 231 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 101 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 160 Query: 232 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 291 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 161 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 220 Query: 292 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 351 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 280 Query: 352 tcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcagaactcgg 411 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 281 tcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcagaactcgg 340 Query: 412 agcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgc 471 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 341 agcacgacgagatcgacttcgagttcctggggaacaggacgggggagccgtacatcctgc 400 Query: 472 agacgaacgtgttctccggcgggaaggg 499 |||||||||| ||||||||||||||||| Sbjct: 401 agacgaacgtcttctccggcgggaaggg 428
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 515 bits (260), Expect = e-143 Identities = 311/328 (94%) Strand = Plus / Plus Query: 172 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 231 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 98 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 157 Query: 232 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 291 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 158 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 217 Query: 292 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 351 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 277 Query: 352 tcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcagaactcgg 411 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 278 tcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcagaactcgg 337 Query: 412 agcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgc 471 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 338 agcacgacgagatcgacttcgagttcctggggaacaggacgggggagccgtacatcctgc 397 Query: 472 agacgaacgtgttctccggcgggaaggg 499 |||||||||| ||||||||||||||||| Sbjct: 398 agacgaacgtcttctccggcgggaaggg 425
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 434 bits (219), Expect = e-118 Identities = 309/339 (91%) Strand = Plus / Plus Query: 163 cggcagcgccgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacat 222 |||| ||| |||| |||||||| ||||||||||| ||| ||||||||||||| ||||| | Sbjct: 112 cggcggcggcgcctcggaagcccgtggacgtgccgttccagaagaactacgtgccgacgt 171 Query: 223 gggcggaggaccacatccactacgtgaacggcggacgggaggtgcagctgtccctcgaca 282 ||||| ||||||||||||||||| | ||||||| |||||||||||||||| ||| |||| Sbjct: 172 gggcgcaggaccacatccactacatcgacggcgggcgggaggtgcagctgtacctggaca 231 Query: 283 agaccaccggcactggcttccagacccggggctcctacctcttcggccacttcagcatgc 342 || |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 232 agtccaccggcacgggcttccagacgcggggctcctacctcttcggccacttcagcatgc 291 Query: 343 acatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgc 402 |||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 292 acatgaagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctgtcgtcgc 351 Query: 403 agaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgt 462 ||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||||||| | Sbjct: 352 agaactcggagcacgacgagatcgactccgagttcctgggcaaccggacggggcagccct 411 Query: 463 acatcctgcagacgaacgtgttctccggcgggaagggcg 501 ||||||||||||| ||||||||| ||||||| ||||||| Sbjct: 412 acatcctgcagaccaacgtgttcaccggcggcaagggcg 450
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 327 bits (165), Expect = 2e-86 Identities = 207/221 (93%) Strand = Plus / Plus Query: 172 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 231 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 113137 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 113196 Query: 232 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 291 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 113197 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 113256 Query: 292 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 351 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113257 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 113316 Query: 352 tcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 113317 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 113357 Score = 188 bits (95), Expect = 1e-44 Identities = 104/107 (97%) Strand = Plus / Plus Query: 393 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacg 452 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 113453 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcctggggaacaggacg 113512 Query: 453 gggcagccgtacatcctgcagacgaacgtgttctccggcgggaaggg 499 ||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 113513 ggggagccgtacatcctgcagacgaacgtcttctccggcgggaaggg 113559
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 327 bits (165), Expect = 2e-86 Identities = 207/221 (93%) Strand = Plus / Plus Query: 172 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 231 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 12756 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 12815 Query: 232 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 291 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 12816 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 12875 Query: 292 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 351 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12876 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 12935 Query: 352 tcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 12936 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 12976 Score = 188 bits (95), Expect = 1e-44 Identities = 104/107 (97%) Strand = Plus / Plus Query: 393 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacg 452 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 13072 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcctggggaacaggacg 13131 Query: 453 gggcagccgtacatcctgcagacgaacgtgttctccggcgggaaggg 499 ||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 13132 ggggagccgtacatcctgcagacgaacgtcttctccggcgggaaggg 13178
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 327 bits (165), Expect = 2e-86 Identities = 207/221 (93%) Strand = Plus / Plus Query: 172 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 231 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 19009939 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 19009998 Query: 232 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 291 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 19009999 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 19010058 Query: 292 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 351 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19010059 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 19010118 Query: 352 tcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 19010119 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 19010159 Score = 188 bits (95), Expect = 1e-44 Identities = 104/107 (97%) Strand = Plus / Plus Query: 393 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacg 452 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 19010255 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcctggggaacaggacg 19010314 Query: 453 gggcagccgtacatcctgcagacgaacgtgttctccggcgggaaggg 499 ||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19010315 ggggagccgtacatcctgcagacgaacgtcttctccggcgggaaggg 19010361
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 327 bits (165), Expect = 2e-86 Identities = 207/221 (93%) Strand = Plus / Plus Query: 172 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 231 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 19168588 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 19168647 Query: 232 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 291 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 19168648 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 19168707 Query: 292 gcactggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 351 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19168708 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 19168767 Query: 352 tcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 19168768 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 19168808 Score = 188 bits (95), Expect = 1e-44 Identities = 104/107 (97%) Strand = Plus / Plus Query: 393 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacg 452 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 19168904 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcctggggaacaggacg 19168963 Query: 453 gggcagccgtacatcctgcagacgaacgtgttctccggcgggaaggg 499 ||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19168964 ggggagccgtacatcctgcagacgaacgtcttctccggcgggaaggg 19169010
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 149 bits (75), Expect = 1e-32 Identities = 162/191 (84%) Strand = Plus / Plus Query: 311 gggctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgc 370 ||||||||||||||||||||||||||| ||||| || ||||| || || |||||||| Sbjct: 343 gggctcctacctcttcggccacttcagtatgcagatgaagctggtgccaggggactccgc 402 Query: 371 cggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgactt 430 || || |||||||| ||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 403 agggaccgtcaccgcattctatctgtcttcccagaactctgagcacgacgagatcgactt 462 Query: 431 cgagttcttggggaacaggacggggcagccgtacatcctgcagacgaacgtgttctccgg 490 ||||||| | || ||| || | |||||||| ||||||| |||||||| |||||| |||| Sbjct: 463 cgagttccttggcaaccggtcagggcagccccacatcctccagacgaatgtgttcaccgg 522 Query: 491 cgggaagggcg 501 ||| ||||||| Sbjct: 523 cggcaagggcg 533
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 121 bits (61), Expect = 2e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 397 |||||| |||||||||||| |||| ||||||||||||| ||| || ||||||||||||| Sbjct: 310 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacctgtc 369 Query: 398 gtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 446 ||||||| ||| |||||||||||||||||||||||||| |||||||| Sbjct: 370 gtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaac 418
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 117 bits (59), Expect = 4e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 276 ctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccacttc 335 |||||||||||| ||||| | ||||||||| || | || |||||||||||| | || Sbjct: 254 ctcgacaagacctccggctccggcttccagtccaagagcgagtacctcttcggcaagatc 313 Query: 336 agcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 395 |||||| |||||||||||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 314 gacatgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacctg 373 Query: 396 tcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggg 442 ||||||||| ||| ||||||||||||||||||||||||| |||| Sbjct: 374 tcgtcgcaggggacggcgcacgacgagatcgacttcgagttcctggg 420
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 113 bits (57), Expect = 6e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 397 |||||| |||||||||||| |||| ||||||||||||| |||||| ||||||||||||| Sbjct: 210 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtc 269 Query: 398 gtcgcagaactcggagcacgacgagatcgacttcgagttcttggg 442 ||||||| ||| ||||||||||||||||||||||||| |||| Sbjct: 270 gtcgcaggggacggcgcacgacgagatcgacttcgagttcctggg 314
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 103 bits (52), Expect = 5e-19 Identities = 124/148 (83%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 397 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| |||| Sbjct: 312 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtc 371 Query: 398 gtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggggca 457 ||||||| ||| ||||| |||||||||||||||||| |||||||| ||| || | Sbjct: 372 gtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcga 431 Query: 458 gccgtacatcctgcagacgaacgtgttc 485 |||||||| ||||| || ||||||||| Sbjct: 432 gccgtacacgctgcacaccaacgtgttc 459
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 103 bits (52), Expect = 5e-19 Identities = 124/148 (83%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 397 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| |||| Sbjct: 312 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtc 371 Query: 398 gtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggggca 457 ||||||| ||| ||||| |||||||||||||||||| |||||||| ||| || | Sbjct: 372 gtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcga 431 Query: 458 gccgtacatcctgcagacgaacgtgttc 485 |||||||| ||||| || ||||||||| Sbjct: 432 gccgtacacgctgcacaccaacgtgttc 459
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 99.6 bits (50), Expect = 8e-18 Identities = 137/166 (82%) Strand = Plus / Plus Query: 318 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 377 ||||||| ||||| |||| |||||| ||||||||||| || |||||||||||||| Sbjct: 303 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 362 Query: 378 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 437 ||| || ||||||| || ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 363 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttc 422 Query: 438 ttggggaacaggacggggcagccgtacatcctgcagacgaacgtgt 483 |||||||| || ||| ||||||||| |||| |||||||||| Sbjct: 423 ctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgt 468
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 99.6 bits (50), Expect = 8e-18 Identities = 137/166 (82%) Strand = Plus / Plus Query: 318 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 377 ||||||| ||||| |||| |||||| ||||||||||| || |||||||||||||| Sbjct: 310 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 369 Query: 378 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 437 ||| || ||||||| || ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 370 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttc 429 Query: 438 ttggggaacaggacggggcagccgtacatcctgcagacgaacgtgt 483 |||||||| || ||| ||||||||| |||| |||||||||| Sbjct: 430 ctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgt 475
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 95.6 bits (48), Expect = 1e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 397 |||||| |||||| ||||| |||| ||||||||||||| |||||| |||||||| |||| Sbjct: 204 catgcagatcaagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtc 263 Query: 398 gtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggggca 457 ||||||| ||| ||||| |||||||||||||||||| |||||||| ||| || | Sbjct: 264 gtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcga 323 Query: 458 gccgtacatcctgcagacgaacgtgttc 485 |||||||| ||||| || ||||||||| Sbjct: 324 gccgtacacgctgcacaccaacgtgttc 351
>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA, complete cds Length = 1268 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcag 473 |||||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||||| Sbjct: 370 cacgacgagatcgatttcgagttcttggggaacaggacaggacagccatacattctgcag 429 Query: 474 acgaacgtgttc 485 || || |||||| Sbjct: 430 accaatgtgttc 441
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 87.7 bits (44), Expect = 3e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 346 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 405 ||||||||||| |||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 337 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactacttgtcgtcgcagg 396 Query: 406 actcggagcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtaca 465 || ||| || |||||||||||||||||| ||||||| ||| ||| ||||||||| Sbjct: 397 ggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccggggagccgtaca 456 Query: 466 tcctgcagacgaacgtgttc 485 ||||| || ||||||||| Sbjct: 457 cgctgcacaccaacgtgttc 476
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 87.7 bits (44), Expect = 3e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 346 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 405 ||||||||||| |||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactacttgtcgtcgcagg 386 Query: 406 actcggagcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtaca 465 || ||| || |||||||||||||||||| ||||||| ||| ||| ||||||||| Sbjct: 387 ggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccggggagccgtaca 446 Query: 466 tcctgcagacgaacgtgttc 485 ||||| || ||||||||| Sbjct: 447 cgctgcacaccaacgtgttc 466
>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase, partial cds Length = 1292 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcag 473 |||||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||||| Sbjct: 436 cacgacgagatcgatttcgagttcttggggaacaggactggacagccatacattctgcag 495 Query: 474 acgaacgtgttc 485 || || |||||| Sbjct: 496 accaatgtgttc 507
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 364 actccgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgaga 423 ||||||||||||| |||||||||| |||||||||||||||| | | ||||||||||| Sbjct: 385 actccgccggcaccgtcaccgcctactacctgtcgtcgcagggcggcgcgcacgacgaga 444 Query: 424 tcgacttcgagttcttggg 442 |||||||||||||| |||| Sbjct: 445 tcgacttcgagttcctggg 463
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA, complete cds Length = 1130 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 405 aactcggagcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtac 464 ||||| |||||||| ||||||||||||||||||||||||||||| || |||||||| ||| Sbjct: 345 aactcagagcacgatgagatcgacttcgagttcttggggaacagaacagggcagccctac 404 Query: 465 atcctgcagac 475 || ||||||| Sbjct: 405 attttgcagac 415
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 346 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 405 ||||||||||| |||| |||| |||||||| || ||||||| |||||||||||||||| Sbjct: 263 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 322 Query: 406 actcggagcacgacgagatcgacttcgagttcttggg 442 || ||||||||||||||||||||||||| |||| Sbjct: 323 gtccgacgcacgacgagatcgacttcgagttcctggg 359
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 316 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 375 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 252 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 311 Query: 376 cagtcaccgccttctacct 394 | |||||| |||||||||| Sbjct: 312 ccgtcacctccttctacct 330 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 ||||||||||||||| |||||||| |||| Sbjct: 353 cacgacgagatcgacatcgagttcatggg 381
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 316 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 375 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 257 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 316 Query: 376 cagtcaccgccttctacct 394 | |||||| |||||||||| Sbjct: 317 ccgtcacctccttctacct 335 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 ||||||||||||||| |||||||| |||| Sbjct: 358 cacgacgagatcgacatcgagttcatggg 386
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 316 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 375 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 8321925 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 8321984 Query: 376 cagtcaccgccttctacct 394 | |||||| |||||||||| Sbjct: 8321985 ccgtcacctccttctacct 8322003 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaac 446 ||||||||||| ||| | ||||||||||||||| Sbjct: 8482431 cacgacgagattgaccttgagttcttggggaac 8482463 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 ||||||||||||||| |||||||| |||| Sbjct: 8322026 cacgacgagatcgacatcgagttcatggg 8322054 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ccgcgggggccctcctcgcc 131 |||||||||||||||||||| Sbjct: 20214168 ccgcgggggccctcctcgcc 20214149
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 316 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 375 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 248 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 307 Query: 376 cagtcaccgccttctacct 394 | |||||| |||||||||| Sbjct: 308 ccgtcacctccttctacct 326 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 ||||||||||||||| |||||||| |||| Sbjct: 349 cacgacgagatcgacatcgagttcatggg 377
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 316 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 375 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 62034 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 62093 Query: 376 cagtcaccgccttctacct 394 | |||||| |||||||||| Sbjct: 62094 ccgtcacctccttctacct 62112 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 ||||||||||||||| |||||||| |||| Sbjct: 62135 cacgacgagatcgacatcgagttcatggg 62163
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 316 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 375 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 257 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 316 Query: 376 cagtcaccgccttctacct 394 | |||||| |||||||||| Sbjct: 317 ccgtcacctccttctacct 335 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 ||||||||||||||| |||||||| |||| Sbjct: 358 cacgacgagatcgacatcgagttcatggg 386
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 316 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 375 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 252 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 311 Query: 376 cagtcaccgccttctacct 394 | |||||| |||||||||| Sbjct: 312 ccgtcacctccttctacct 330 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 ||||||||||||||| |||||||| |||| Sbjct: 353 cacgacgagatcgacatcgagttcatggg 381
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 348 aagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 395 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 281 aagctcgtcgacggcaactccgccggcacagtcacctccttctacctg 328 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 ||||||||||||||| |||||||| |||| Sbjct: 350 cacgacgagatcgacatcgagttcatggg 378
>gb|AF052194.1|AF052194 Actinidia deliciosa xyloglucan endotransglycosylase precursor (XET) mRNA, partial cds Length = 789 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 405 aactcggagcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtac 464 ||||| ||||| || ||||| ||||| |||||||||||||||||||| |||||||| ||| Sbjct: 280 aactcagagcatgatgagatagactttgagttcttggggaacaggacagggcagccatac 339 Query: 465 atcctgcagacgaacgtgtt 484 || ||||||| || ||||| Sbjct: 340 atattgcagacaaatgtgtt 359
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 318 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 377 |||||||||||| | |||||| || | || ||||||||||||||| ||||||| || || Sbjct: 154 tacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgctgggact 213 Query: 378 gtcaccgccttctacctgtcgtc 400 |||||| ||||||||||| |||| Sbjct: 214 gtcacctccttctacctgacgtc 236
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 318 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 377 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 266 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 325 Query: 378 gtcaccgccttctacctgtcgtc 400 |||||| ||||||||||| |||| Sbjct: 326 gtcacctccttctacctgacgtc 348
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 318 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 377 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 254 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 313 Query: 378 gtcaccgccttctacctgtcgtc 400 |||||| ||||||||||| |||| Sbjct: 314 gtcacctccttctacctgacgtc 336
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 318 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 377 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 378 gtcaccgccttctacctgtcgtc 400 |||||| ||||||||||| |||| Sbjct: 315 gtcacctccttctacctgacgtc 337 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacttcgagttcttggg 442 |||||||||||||||| |||||||| |||| Sbjct: 353 gcacgacgagatcgacatcgagttcatggg 382
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 318 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 377 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 378 gtcaccgccttctacctgtcgtc 400 |||||| ||||||||||| |||| Sbjct: 315 gtcacctccttctacctgacgtc 337 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacttcgagttcttggg 442 |||||||||||||||| |||||||| |||| Sbjct: 353 gcacgacgagatcgacatcgagttcatggg 382
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 318 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 377 |||||||||||| | |||||| || | || ||||||||||||||| ||||||| || || Sbjct: 327 tacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgctgggact 386 Query: 378 gtcaccgccttctacctgtcgtc 400 |||||| ||||||||||| |||| Sbjct: 387 gtcacctccttctacctgacgtc 409
>gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan endotransglycosylase precursor (XET) mRNA, complete cds Length = 1178 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 387 ttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 446 ||||| ||||| || || ||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 314 ttctatctgtcttcacaaaactcagagcatgatgagatagactttgagttcttggggaac 373 Query: 447 aggacggggcagccgtacatcctgcagacgaacgtgttc 485 || || |||||||| ||||| ||||||| || |||||| Sbjct: 374 agaacagggcagccatacatattgcagacaaatgtgttc 412
>ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT5G13870 (EXGT-A4) mRNA, complete cds Length = 1386 Score = 67.9 bits (34), Expect = 3e-08 Identities = 166/210 (79%) Strand = Plus / Plus Query: 275 cctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccactt 334 |||||||||| ||| ||||||||||| ||| || || |||||| | || |||||||| Sbjct: 568 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 627 Query: 335 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 394 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 628 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 687 Query: 395 gtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggg 454 |||||| |||||||| || || || ||||| ||||| ||||| | |||||||| || || Sbjct: 688 gtcgtcccagaactcagaacatgatgagatagactttgagtttctagggaacagaactgg 747 Query: 455 gcagccgtacatcctgcagacgaacgtgtt 484 ||||| ||||| ||||||| |||||||| Sbjct: 748 ccagccttacattttgcagactaacgtgtt 777
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 393 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 446 |||||||||||| ||| |||||||||||||||||||||||||| |||||||| Sbjct: 28761689 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaac 28761742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 28749764 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcag 473 ||||| |||||||||||||||||| |||||||| ||| || ||||||||| ||||| Sbjct: 28749974 cacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcac 28750033 Query: 474 acgaacgtgttc 485 || ||||||||| Sbjct: 28750034 accaacgtgttc 28750045 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 346 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 ||||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 28773895 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 28773849 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||| |||||||||||| |||| ||||||||||||| ||| || |||||||| Sbjct: 28761544 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 28761598 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 420 gagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcagacgaac 479 |||||||||||||||||| ||||||| ||| ||| ||||||||| ||||| || ||| Sbjct: 28773746 gagatcgacttcgagttcctggggaatgtgaccggggagccgtacacgctgcacaccaac 28773687 Query: 480 gtgttc 485 |||||| Sbjct: 28773686 gtgttc 28773681 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 |||||||||||||||||||||||| |||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctggg 13230430 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 cgtcggcggcgactccgccg 372 |||||||||||||||||||| Sbjct: 11429792 cgtcggcggcgactccgccg 11429811
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 393 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 446 |||||||||||| ||| |||||||||||||||||||||||||| |||||||| Sbjct: 69464 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaac 69517 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 57539 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcag 473 ||||| |||||||||||||||||| |||||||| ||| || ||||||||| ||||| Sbjct: 57749 cacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcac 57808 Query: 474 acgaacgtgttc 485 || ||||||||| Sbjct: 57809 accaacgtgttc 57820 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 346 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 ||||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 81670 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 81624 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||| |||||||||||| |||| ||||||||||||| ||| || |||||||| Sbjct: 69319 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 69373 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 420 gagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcagacgaac 479 |||||||||||||||||| ||||||| ||| ||| ||||||||| ||||| || ||| Sbjct: 81521 gagatcgacttcgagttcctggggaatgtgaccggggagccgtacacgctgcacaccaac 81462 Query: 480 gtgttc 485 |||||| Sbjct: 81461 gtgttc 81456
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 393 ctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaac 446 |||||||||||| ||| |||||||||||||||||||||||||| |||||||| Sbjct: 162255 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaac 162308 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 150330 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcag 473 ||||| |||||||||||||||||| |||||||| ||| || ||||||||| ||||| Sbjct: 150540 cacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcac 150599 Query: 474 acgaacgtgttc 485 || ||||||||| Sbjct: 150600 accaacgtgttc 150611 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||| |||||||||||| |||| ||||||||||||| ||| || |||||||| Sbjct: 162110 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 162164
>dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan transferase, complete cds, clone: RAFL23-11-K19 Length = 1028 Score = 67.9 bits (34), Expect = 3e-08 Identities = 166/210 (79%) Strand = Plus / Plus Query: 275 cctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccactt 334 |||||||||| ||| ||||||||||| ||| || || |||||| | || |||||||| Sbjct: 191 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 250 Query: 335 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 394 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 251 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 310 Query: 395 gtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggg 454 |||||| |||||||| || || || ||||| ||||| ||||| | |||||||| || || Sbjct: 311 gtcgtcccagaactcagaacatgatgagatagactttgagtttctagggaacagaactgg 370 Query: 455 gcagccgtacatcctgcagacgaacgtgtt 484 ||||| ||||| ||||||| |||||||| Sbjct: 371 ccagccttacattttgcagactaacgtgtt 400
>dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxyloglucan transferase, complete cds Length = 1050 Score = 67.9 bits (34), Expect = 3e-08 Identities = 166/210 (79%) Strand = Plus / Plus Query: 275 cctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccactt 334 |||||||||| ||| ||||||||||| ||| || || |||||| | || |||||||| Sbjct: 211 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 270 Query: 335 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 394 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 271 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 330 Query: 395 gtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggg 454 |||||| |||||||| || || || ||||| ||||| ||||| | |||||||| || || Sbjct: 331 gtcgtcccagaactcagaacatgatgagatagactttgagtttctagggaacagaactgg 390 Query: 455 gcagccgtacatcctgcagacgaacgtgtt 484 ||||| ||||| ||||||| |||||||| Sbjct: 391 ccagccttacattttgcagactaacgtgtt 420
>gb|AF515607.1| Populus tremula x Populus tremuloides xyloglucan endotransglycosylase precursor (XET16A) mRNA, complete cds Length = 1267 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 375 acagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgag 434 |||||||| || ||||| || || || || ||||||||||| |||||||| ||||| ||| Sbjct: 336 acagtcactgctttctatctatcctcacaaaactcggagcatgacgagatagactttgag 395 Query: 435 ttcttggggaacaggacggggcagccgtacatcctgcagac 475 ||||| || |||||||| || ||||| ||||| ||||||| Sbjct: 396 ttcttaggaaacaggactggccagccctacattttgcagac 436
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 348 aagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 395 |||||||||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 272 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 319 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 ||||||||||||||| |||||||| |||| Sbjct: 341 cacgacgagatcgacatcgagttcatggg 369
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 364 actccgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgaga 423 |||| |||||||| |||||| |||||||||| ||||| ||| | | | |||||||||| Sbjct: 399 actcagccggcaccgtcaccaccttctacctctcgtcccagggccccaaccacgacgaga 458 Query: 424 tcgacttcgagttcttggggaaca 447 |||||||||||||| | ||||||| Sbjct: 459 tcgacttcgagttcctagggaaca 482
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 412 agcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgc 471 |||||||||||||||||||||||||| |||||||| || ||| ||||||||| ||| Sbjct: 412 agcacgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgc 471 Query: 472 agacgaacgtgt 483 | |||||||||| Sbjct: 472 acacgaacgtgt 483 Score = 44.1 bits (22), Expect = 0.43 Identities = 61/74 (82%) Strand = Plus / Plus Query: 318 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 377 ||||||| ||||| |||| |||||| ||||||||||| || |||||||||||||| Sbjct: 193 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 252 Query: 378 gtcaccgccttcta 391 ||| || ||||||| Sbjct: 253 gtcgccaccttcta 266
>gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hydrolase precursor (XTH1) mRNA, complete cds Length = 1112 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 409 cggagcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcc 468 |||||||||| ||||| ||||| ||||||||||||||||| || || || || ||||| Sbjct: 290 cggagcacgatgagatagactttgagttcttggggaacagaacaggacaaccttacattt 349 Query: 469 tgcagacgaacgtgttctccggcgggaaggg 499 ||||||| || |||||| | || |||||||| Sbjct: 350 tgcagacaaatgtgttcactggagggaaggg 380
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 320 cctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagt 379 |||||||||| | ||||||||| | || ||||||||| |||||| || ||||||| || Sbjct: 243 cctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggt 302 Query: 380 caccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttctt 439 | || ||||||||||| | ||| || | ||||||||||||||||||||||||| | Sbjct: 303 cgccaccttctacctgacatcggagggagatgcgcacgacgagatcgacttcgagttcct 362 Query: 440 ggggaac 446 ||||||| Sbjct: 363 ggggaac 369
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 318 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 377 |||||||||||| | |||||| | | || |||||||||| |||| ||||||||||||| Sbjct: 259 tacctcttcggcgagttcagcgtccggatgaagctcgtcgacggcaactccgccggcacc 318 Query: 378 gtcaccgccttctacctgtcgtc 400 |||||| ||||||| ||| |||| Sbjct: 319 gtcacctccttctatctgacgtc 341
>gb|AY189971.1| Gossypium hirsutum xyloglucan endotransglycosylase mRNA, complete cds Length = 1369 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 334 tcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgcctt 388 |||||||| | ||||||||| || ||||||||||||||| |||||||||||||| Sbjct: 1251 tcagcatgaaaatcaagctcatccccggcgactccgccggaacagtcaccgcctt 1305 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 334 tcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgcctt 388 |||||||| | ||||||||| || ||||||||||||||| |||||||||||||| Sbjct: 311 tcagcatgaaaatcaagctcatccccggcgactccgccggaacagtcaccgcctt 365
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 320 cctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagt 379 |||||||||| | ||||||||| | || ||||||||| |||||| || ||||||| || Sbjct: 311 cctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggt 370 Query: 380 caccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttctt 439 | || ||||||||||| | ||| || | ||||||||||||||||||||||||| | Sbjct: 371 cgccaccttctacctgacatcggagggagatgcgcacgacgagatcgacttcgagttcct 430 Query: 440 ggggaac 446 ||||||| Sbjct: 431 ggggaac 437
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 372 ggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttc 431 ||||| |||||| |||||||||||||||| ||| | | ||||||||||||||||||| Sbjct: 375 ggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgacttc 434 Query: 432 gagttcttggg 442 |||||| |||| Sbjct: 435 gagttcctggg 445
>dbj|D88413.1| Cotton mRNA for endo-xyloglucan transferase, clone CF101, partial cds Length = 1062 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 334 tcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgcctt 388 |||||||| | ||||||||| || ||||||||||||||| |||||||||||||| Sbjct: 194 tcagcatgaaaatcaagctcatccccggcgactccgccggaacagtcaccgcctt 248
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 383 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 234 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 279
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 413 gcacgacgagatcgacttcgagttcttggggaac 446 ||||||||||||||||||||||||| |||||||| Sbjct: 32714 gcacgacgagatcgacttcgagttcctggggaac 32681
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 383 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 141990 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 141945 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Minus Query: 340 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 150577 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 150525
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 413 gcacgacgagatcgacttcgagttcttggggaac 446 ||||||||||||||||||||||||| |||||||| Sbjct: 30557006 gcacgacgagatcgacttcgagttcctggggaac 30556973 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 383 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 30508613 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 30508568 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Minus Query: 340 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 30517200 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 30517148
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 383 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 317 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 272
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 338 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 383 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 297 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 342
>emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 58.0 bits (29), Expect = 3e-05 Identities = 168/212 (79%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 275 cctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccactt 334 |||||||||| ||| ||||||||||| ||| || || |||||| | || |||||||| Sbjct: 557 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 616 Query: 335 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 394 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 617 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 676 Query: 395 gtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggg 454 |||||| |||||||| || || || ||||| ||||| |||||| | |||||||| || || Sbjct: 677 gtcgtcccagaactcagaacatgatgagatagactttgagttc-tagggaacagaactgg 735 Query: 455 gc--agccgtacatcctgcagacgaacgtgtt 484 || |||| ||||| ||||||| |||||||| Sbjct: 736 gccaagccttacattttgcagactaacgtgtt 767
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 416 cgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcagac 475 ||||||| | |||||||||||| |||||||| ||||||| |||| |||||| | ||||| Sbjct: 345 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 404 Query: 476 gaacgtgt 483 ||||||| Sbjct: 405 caacgtgt 412 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 333 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 253 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 312
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 416 cgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcagac 475 ||||||| | |||||||||||| |||||||| ||||||| |||| |||||| | ||||| Sbjct: 437 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 496 Query: 476 gaacgtgt 483 ||||||| Sbjct: 497 caacgtgt 504 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 333 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 345 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 404
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 416 cgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcagac 475 ||||||| | |||||||||||| |||||||| ||||||| |||| |||||| | ||||| Sbjct: 20676460 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 20676519 Query: 476 gaacgtgt 483 ||||||| Sbjct: 20676520 caacgtgt 20676527 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 333 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 20676277 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 20676336
>emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1347 Score = 56.0 bits (28), Expect = 1e-04 Identities = 151/192 (78%) Strand = Plus / Plus Query: 275 cctcgacaagaccaccggcactggcttccagacccggggctcctacctcttcggccactt 334 |||||||||| ||| ||||||||||| ||| || || |||||| | || |||||||| Sbjct: 568 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 627 Query: 335 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 394 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 628 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 687 Query: 395 gtcgtcgcagaactcggagcacgacgagatcgacttcgagttcttggggaacaggacggg 454 |||||| |||||||| || || || ||||| ||||| ||||| | |||||||| || || Sbjct: 688 gtcgtcccagaactcagaacatgatgagatagactttgagtttctagggaacagaactgg 747 Query: 455 gcagccgtacat 466 ||||| ||||| Sbjct: 748 ccagccttacat 759
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 416 cgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcagac 475 ||||||| | |||||||||||| |||||||| ||||||| |||| |||||| | ||||| Sbjct: 29210 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 29269 Query: 476 gaacgtgt 483 ||||||| Sbjct: 29270 caacgtgt 29277 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 333 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 29027 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 29086
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 416 cgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcagac 475 ||||||| | |||||||||||| |||||||| ||||||| |||| |||||| | ||||| Sbjct: 437 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 496 Query: 476 gaacgtgt 483 ||||||| Sbjct: 497 caacgtgt 504 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 333 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 345 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 404
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 416 cgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcagac 475 ||||||| | |||||||||||| |||||||| ||||||| |||| |||||| | ||||| Sbjct: 531 cgacgagctggacttcgagttcctggggaaccggacgggtgagccctacatcatccagac 590 Query: 476 gaacgtgt 483 ||||||| Sbjct: 591 caacgtgt 598 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 333 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 348 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 407
>dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1712 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 409 cggagcacgacgagatcgacttcgagttcttggggaacag 448 |||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 842 cggagcacgatgagatagactttgagttcttggggaacag 881
>dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferase, partial cds Length = 975 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 372 ggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttc 431 ||||||||||| || ||||| | || || || ||| ||||||| || ||||| ||||| Sbjct: 273 ggcacagtcactgctttctatttatcttcccaaaacgcggagcatgatgagatagacttt 332 Query: 432 gagttcttggggaacaggacggggcagccgtacatcctgcagacgaacgtgttctccggc 491 ||||||||||||||||| || || || || ||||| ||||| || || |||||| |||| Sbjct: 333 gagttcttggggaacagaacaggacaaccttacattctgcaaacaaatgtgttcaccgga 392 Query: 492 gggaaggg 499 || ||||| Sbjct: 393 ggcaaggg 400
>gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence Length = 765 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 420 gagatcgacttcgagttcttggggaac 446 ||||||||||||||||||||||||||| Sbjct: 1 gagatcgacttcgagttcttggggaac 27
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 412 agcacgacgagatcgacttcgagttcttggg 442 |||||||||||||||||||||||||| |||| Sbjct: 10359112 agcacgacgagatcgacttcgagttcctggg 10359142 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Plus Query: 349 agctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttctt 439 ||||||||||||||||| |||||||| Sbjct: 10363968 cacgacgagatcgactttgagttctt 10363993
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 412 agcacgacgagatcgacttcgagttcttggg 442 |||||||||||||||||||||||||| |||| Sbjct: 1534 agcacgacgagatcgacttcgagttcctggg 1564 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Plus Query: 349 agctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttctt 439 ||||||||||||||||| |||||||| Sbjct: 6390 cacgacgagatcgactttgagttctt 6415
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 412 agcacgacgagatcgacttcgagttcttggg 442 |||||||||||||||||||||||||| |||| Sbjct: 124922 agcacgacgagatcgacttcgagttcctggg 124952 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Plus Query: 349 agctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 366 tccgccggcacagtcaccgccttctacctgtcgt 399 ||||||||||| |||||||||| ||||||||||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgt 396 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacttcgagttcttggg 442 ||||||| ||||||||||||||||| |||| Sbjct: 411 gcacgacaagatcgacttcgagttcctggg 440
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaaca 447 |||||||||||||||||||||||| |||| |||| Sbjct: 74 cacgacgagatcgacttcgagttcctgggcaaca 107
>dbj|AB017025.1| Nicotiana tabacum mRNA for endo-xyloglucan transferase (EXGT), complete cds Length = 1211 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 411 gagcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctg 470 |||||||| ||||| || || || ||||| ||||||||||| ||||| || ||||| || Sbjct: 361 gagcacgatgagatagattttgaattcttagggaacaggactgggcaaccatacattttg 420 Query: 471 cagacgaacgtgtt 484 |||||||| ||||| Sbjct: 421 cagacgaatgtgtt 434
>ref|XM_470453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacttcgagttcttggggaacagg 449 |||||||||| | ||||||||||||||||| |||||| Sbjct: 459 gcacgacgagctggacttcgagttcttgggcaacagg 495
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 413 gcacgacgagatcgacttcgagttcttggggaacagg 449 |||||||||| | ||||||||||||||||| |||||| Sbjct: 89251 gcacgacgagctggacttcgagttcttgggcaacagg 89215
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 413 gcacgacgagatcgacttcgagttcttggggaacagg 449 |||||||||| | ||||||||||||||||| |||||| Sbjct: 35691473 gcacgacgagctggacttcgagttcttgggcaacagg 35691437 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 413 gcacgacgagatcgacttcgagttcttggggaac 446 |||||||||| | |||||||||||| |||||||| Sbjct: 7311667 gcacgacgagctggacttcgagttcctggggaac 7311634 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 gacgagatcgacttcgagttc 437 ||||||||||||||||||||| Sbjct: 944218 gacgagatcgacttcgagttc 944238 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aacagaggaggaggaagaga 91 |||||||||||||||||||| Sbjct: 33448951 aacagaggaggaggaagaga 33448932
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 417 gacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgcagacg 476 ||||| ||||||||||||||| |||||||| ||| || ||||| |||| |||||| || Sbjct: 424 gacgaaatcgacttcgagttcctggggaacgagaccggacagccctacaccctgcacacc 483 Query: 477 aacgt 481 ||||| Sbjct: 484 aacgt 488
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaac 446 ||||||||||| |||||||||||| |||||||| Sbjct: 51 cacgacgagattgacttcgagttcctggggaac 83
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 413 gcacgacgagatcgacttcgagttcttggggaacagg 449 |||||||||| | ||||||||||||||||| |||||| Sbjct: 35781546 gcacgacgagctggacttcgagttcttgggcaacagg 35781510 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 413 gcacgacgagatcgacttcgagttcttggggaac 446 |||||||||| | |||||||||||| |||||||| Sbjct: 7309562 gcacgacgagctggacttcgagttcctggggaac 7309529 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 gacgagatcgacttcgagttc 437 ||||||||||||||||||||| Sbjct: 944216 gacgagatcgacttcgagttc 944236 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aacagaggaggaggaagaga 91 |||||||||||||||||||| Sbjct: 33539461 aacagaggaggaggaagaga 33539442
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 |||||||||||||||||||||||| |||| Sbjct: 147590 cacgacgagatcgacttcgagttcctggg 147618
>dbj|AK104577.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A12, full insert sequence Length = 1326 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacttcgagttcttggggaacagg 449 |||||||||| | ||||||||||||||||| |||||| Sbjct: 410 gcacgacgagctggacttcgagttcttgggcaacagg 446
>dbj|AK071886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H18, full insert sequence Length = 1359 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacttcgagttcttggggaacagg 449 |||||||||| | ||||||||||||||||| |||||| Sbjct: 463 gcacgacgagctggacttcgagttcttgggcaacagg 499
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggg 442 |||||||||||||||||||||||| |||| Sbjct: 643 cacgacgagatcgacttcgagttcctggg 671
>gb|AY497478.1| Lycopersicon esculentum xyloglucan endotransglucosylase-hydrolase XTH7 (XTH7) mRNA, complete cds Length = 993 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 426 gacttcgagttcttggggaacaggacggggcagccgtaca 465 |||||||| |||||||| ||| |||| ||||||||||||| Sbjct: 343 gacttcgaattcttgggaaaccggacagggcagccgtaca 382
>gb|AY098522.1| Ananas comosus xyloglucan endotransglycosylase mRNA, partial cds Length = 742 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 378 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgacttcgagttc 437 |||||| |||||||| |||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 25 gtcaccaccttctacttgtcgtcgcaagggtcgatgcacgacgagatcgatttcgagttc 84
>ref|NM_101028.2| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT1G11545 mRNA, complete cds Length = 1131 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 348 aagctcgtcggcggcgactccgccggc 374 ||||||||||| ||||||||||||||| Sbjct: 336 aagctcgtcggaggcgactccgccggc 362
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence Length = 168537 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 76 gaggaggaggaagagaggccggc 98 ||||||||||||||||||||||| Sbjct: 122700 gaggaggaggaagagaggccggc 122678
>emb|AJ843248.1| Physcomitrella patens mRNA for xyloglucan endotransglycosylase/hydrolase precursor (xth1 gene) Length = 1045 Score = 46.1 bits (23), Expect = 0.11 Identities = 53/63 (84%) Strand = Plus / Plus Query: 439 tggggaacaggacggggcagccgtacatcctgcagacgaacgtgttctccggcgggaagg 498 |||||||| ||| |||||||||| ||| ||||| || ||||||||| |||||||||| Sbjct: 324 tggggaactcgactgggcagccgttcattctgcacaccaacgtgttcgtgggcgggaagg 383 Query: 499 gcg 501 ||| Sbjct: 384 gcg 386
>gb|AC011661.5|AC011661 Genomic sequence for Arabidopsis thaliana BAC T23J18 from chromosome I, complete sequence Length = 84797 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 348 aagctcgtcggcggcgactccgccggc 374 ||||||||||| ||||||||||||||| Sbjct: 64437 aagctcgtcggaggcgactccgccggc 64411
>gb|AY088546.1| Arabidopsis thaliana clone 7729 mRNA, complete sequence Length = 1109 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 348 aagctcgtcggcggcgactccgccggc 374 ||||||||||| ||||||||||||||| Sbjct: 315 aagctcgtcggaggcgactccgccggc 341
>dbj|D86730.1| Nicotiana tabacum mRNA for endoxyloglucan transferase related protein, complete cds Length = 1210 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 411 gagcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctg 470 |||||||| ||||| || || || ||||| ||||||||||| ||||| || ||||| || Sbjct: 314 gagcacgatgagatagattttgaattcttagggaacaggactgggcaaccatacattttg 373 Query: 471 cagacgaacgtgttc 485 ||||| || |||||| Sbjct: 374 cagacaaatgtgttc 388
>emb|CR711857.2|CNS0GC7X Tetraodon nigroviridis full-length cDNA Length = 892 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gaggaggaggaagagaggccgg 97 |||||||||||||||||||||| Sbjct: 576 gaggaggaggaagagaggccgg 597
>emb|CR718189.2|CNS0GH3N Tetraodon nigroviridis full-length cDNA Length = 891 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 gaggaggaggaagagaggccgg 97 |||||||||||||||||||||| Sbjct: 576 gaggaggaggaagagaggccgg 597
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 413 gcacgacgagatcgacttcgagttcttggggaac 446 |||||||||| | |||||||||||| |||||||| Sbjct: 62923 gcacgacgagctggacttcgagttcctggggaac 62890
>gb|DQ320658.2| Rosa x borboniana xyloglucan endotransglucosylase/hydrolase 2 (Xth2) mRNA, complete cds Length = 1336 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 432 gagttcttggggaacaggacggggcagccgtaca 465 |||||||||||||||||||| || ||||| |||| Sbjct: 408 gagttcttggggaacaggactggacagccttaca 441
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 aacagaggaggaggaagagagg 93 |||||||||||||||||||||| Sbjct: 23162659 aacagaggaggaggaagagagg 23162680
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 44.1 bits (22), Expect = 0.43 Identities = 61/74 (82%) Strand = Plus / Plus Query: 364 actccgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgaga 423 ||||||||||||| ||||| |||| |||||| || || ||| || ||||||||||| Sbjct: 342 actccgccggcaccgtcacagcctactacctctcctcccagggaacgacgcacgacgaga 401 Query: 424 tcgacttcgagttc 437 ||||||| |||||| Sbjct: 402 tcgactttgagttc 415
>dbj|AK061284.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G03, full insert sequence Length = 1194 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacttcgagttcttggggaac 446 |||||||||| | |||||||||||| |||||||| Sbjct: 436 gcacgacgagctggacttcgagttcctggggaac 469
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 364 actccgccggcacagtcaccgccttctacctgtcgtcg 401 ||||||| ||||| || ||| ||||||||||||||||| Sbjct: 383 actccgcgggcaccgtgacctccttctacctgtcgtcg 420
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 aacagaggaggaggaagagagg 93 |||||||||||||||||||||| Sbjct: 23090850 aacagaggaggaggaagagagg 23090871
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 aacagaggaggaggaagagagg 93 |||||||||||||||||||||| Sbjct: 15738 aacagaggaggaggaagagagg 15717
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 gacgagatcgacttcgagttc 437 ||||||||||||||||||||| Sbjct: 99415 gacgagatcgacttcgagttc 99435
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaac 446 ||||||||||| ||| | ||||||||||||||| Sbjct: 307 cacgacgagattgaccttgagttcttggggaac 339
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 340 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 212 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 264
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gtaacagaggaggaggaagag 90 ||||||||||||||||||||| Sbjct: 71484 gtaacagaggaggaggaagag 71464
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Minus Query: 413 gcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgca 472 |||||||||||||||| | |||||| |||| ||| | |||| |||| |||| ||||| Sbjct: 799 gcacgacgagatcgacctggagttcctgggcaacgtgtcgggcgagccctacacgctgca 740 Query: 473 gacgaacgtgttc 485 |||||||||||| Sbjct: 739 cacgaacgtgttc 727
>gb|BT013348.1| Lycopersicon esculentum clone 135287R, mRNA sequence Length = 1248 Score = 42.1 bits (21), Expect = 1.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 411 gagcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctg 470 |||||||| ||||| || || || || ||||||||||| || |||||||| ||||| || Sbjct: 348 gagcacgatgagatagattttgaatttttggggaacagaactgggcagccatacatattg 407 Query: 471 cagac 475 ||||| Sbjct: 408 cagac 412
>gb|AC132391.3| Mus musculus BAC clone RP23-454N21 from chromosome 12, complete sequence Length = 178291 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 acagaggaggaggaagagagg 93 ||||||||||||||||||||| Sbjct: 99335 acagaggaggaggaagagagg 99355
>gb|AC151992.3| Mus musculus BAC clone RP23-212H13 from chromosome 8, complete sequence Length = 182428 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 acagaggaggaggaagagagg 93 ||||||||||||||||||||| Sbjct: 162052 acagaggaggaggaagagagg 162032
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 tcctcgccgtggtggccacggtgct 148 ||||||||||||||||| ||||||| Sbjct: 75420 tcctcgccgtggtggccgcggtgct 75396
>gb|AE005709.1| Caulobacter crescentus CB15 section 35 of 359 of the complete genome Length = 10538 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 tcctcgccgtggtggccacggtgct 148 |||| |||||||||||||||||||| Sbjct: 9397 tcctggccgtggtggccacggtgct 9421
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 340 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 284 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 336
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gtaacagaggaggaggaagag 90 ||||||||||||||||||||| Sbjct: 18673708 gtaacagaggaggaggaagag 18673688
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaac 446 ||||||||||||||||| |||||| | |||||| Sbjct: 535 cacgacgagatcgactttgagttcctcgggaac 567
>gb|AC157949.1| Mus musculus BAC clone RP23-148A16 from chromosome 9, complete sequence Length = 204674 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 gaggaggaggaagagaggccg 96 ||||||||||||||||||||| Sbjct: 12874 gaggaggaggaagagaggccg 12894
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaac 446 ||||||||||| ||| | ||||||||||||||| Sbjct: 98148 cacgacgagattgaccttgagttcttggggaac 98180
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 gggggccctcctcgccgtggtggcc 140 ||||||||||||| ||||||||||| Sbjct: 1460587 gggggccctcctcaccgtggtggcc 1460611
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 cacgacgagatcgacttcgagttcttggggaac 446 ||||||||||| ||| | ||||||||||||||| Sbjct: 11974 cacgacgagattgaccttgagttcttggggaac 12006
>dbj|AK073730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F24, full insert sequence Length = 1123 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 gacgagatcgacttcgagttc 437 ||||||||||||||||||||| Sbjct: 355 gacgagatcgacttcgagttc 375
>emb|Z60540.1|HS27G11R H.sapiens CpG island DNA genomic Mse1 fragment, clone 27g11, reverse read cpg27g11.rt1a Length = 321 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 agaggaggaggaagagaggcc 95 ||||||||||||||||||||| Sbjct: 55 agaggaggaggaagagaggcc 75
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 340 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 392 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 302 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 354
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 42.1 bits (21), Expect = 1.7 Identities = 60/73 (82%) Strand = Plus / Plus Query: 413 gcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctgca 472 |||||||||||||||| | |||||| |||| ||| | |||| |||| |||| ||||| Sbjct: 405 gcacgacgagatcgacctggagttcctgggcaacgtgtcgggcgagccctacacgctgca 464 Query: 473 gacgaacgtgttc 485 |||||||||||| Sbjct: 465 cacgaacgtgttc 477
>dbj|AP001858.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-959F10, complete sequence Length = 210723 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 agaggaggaggaagagaggcc 95 ||||||||||||||||||||| Sbjct: 46295 agaggaggaggaagagaggcc 46315
>dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1913 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 426 gacttcgagttcttggggaacaggacggggcagccgtacat 466 ||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 891 gacttcgagttcttgggaaacagaactgggcaaccatacat 931
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 355 tcggcggcgactccgccggcacagtcacc 383 |||||||||||| ||||||||| |||||| Sbjct: 2481622 tcggcggcgacttcgccggcaccgtcacc 2481594
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 cgcgggggccctcctcgccgtggtg 137 |||||||||||||||||||| |||| Sbjct: 1592243 cgcgggggccctcctcgccgcggtg 1592219
>gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete sequence Length = 171495 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 gaggaggaggaagagaggccg 96 ||||||||||||||||||||| Sbjct: 118167 gaggaggaggaagagaggccg 118187
>dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transferase, complete cds Length = 1319 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 426 gacttcgagttcttggggaacaggacggggcagccgtacat 466 ||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 494 gacttcgagttcttgggaaacagaactgggcaaccatacat 534
>dbj|D16456.1|TOMEXT3 Tomato mRNA for endo-xyloglucan transferase, complete cds Length = 1137 Score = 42.1 bits (21), Expect = 1.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 411 gagcacgacgagatcgacttcgagttcttggggaacaggacggggcagccgtacatcctg 470 |||||||| ||||| || || || || ||||||||||| || |||||||| ||||| || Sbjct: 366 gagcacgatgagatagattttgaatttttggggaacagaactgggcagccatacatattg 425 Query: 471 cagac 475 ||||| Sbjct: 426 cagac 430
>dbj|AB015428.1| Pisum sativum mRNA for EXGT1, complete cds Length = 1125 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 420 gagatcgacttcgagttcttggggaacag 448 ||||| || |||||||||||||||||||| Sbjct: 331 gagatagatttcgagttcttggggaacag 359
>dbj|AB042531.1| Pisum sativum PsEXT mRNA for xyloglucan endotransglycosylase, complete cds Length = 1325 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 420 gagatcgacttcgagttcttggggaacag 448 ||||| || |||||||||||||||||||| Sbjct: 520 gagatagatttcgagttcttggggaacag 548
>ref|NM_105205.2| Arabidopsis thaliana ATXTH17; hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT1G65310 (ATXTH17) mRNA, complete cds Length = 1003 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 gagatcgacttcgagttcttggggaaca 447 |||||||| |||||||||||||| |||| Sbjct: 310 gagatcgatttcgagttcttgggaaaca 337
>ref|NM_125135.1| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT5G57540 mRNA, complete cds Length = 855 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 atcgacttcgagttcttggg 442 |||||||||||||||||||| Sbjct: 301 atcgacttcgagttcttggg 320
>ref|NM_188932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2403 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccgcgggggccctcctcgcc 131 |||||||||||||||||||| Sbjct: 425 ccgcgggggccctcctcgcc 444
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 367 ccgccggcacagtcaccgccttctacctgtcg 398 |||||||||| ||||||||||||||||||| Sbjct: 305 ccgccggcaccaacaccgccttctacctgtcg 336
>ref|XM_958677.1| Neurospora crassa OR74A hypothetical protein (NCU07476.1) partial mRNA Length = 2763 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 agaggaggaggaagagaggc 94 |||||||||||||||||||| Sbjct: 135 agaggaggaggaagagaggc 116
>ref|XM_327761.1| Neurospora crassa OR74A hypothetical protein (NCU07476.1) partial mRNA Length = 2763 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 agaggaggaggaagagaggc 94 |||||||||||||||||||| Sbjct: 135 agaggaggaggaagagaggc 116
>gb|AC146238.2| Pan troglodytes BAC clone CH251-170A15 from Y, complete sequence Length = 169552 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 agtactagccaagccattgt 61 |||||||||||||||||||| Sbjct: 46674 agtactagccaagccattgt 46693
>gb|AC120408.7| Mus musculus chromosome 5, clone RP24-433N14, complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 agaggaggaggaagagaggc 94 |||||||||||||||||||| Sbjct: 129665 agaggaggaggaagagaggc 129646
>gb|AC154710.2| Mus musculus BAC clone RP24-357L12 from chromosome 14, complete sequence Length = 163421 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gaggaggaggaagagaggcc 95 |||||||||||||||||||| Sbjct: 22965 gaggaggaggaagagaggcc 22946
>gb|AC005247.2| Homo sapiens PAC clone RP4-740L10 from 7, complete sequence Length = 124096 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ggaggaggaagagaggccgg 97 |||||||||||||||||||| Sbjct: 110181 ggaggaggaagagaggccgg 110162
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gccattgcttctagtagtac 46 |||||||||||||||||||| Sbjct: 734596 gccattgcttctagtagtac 734615
>gb|AC159294.2| Mus musculus BAC clone RP23-287I15 from chromosome 12, complete sequence Length = 226841 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cagaggaggaggaagagagg 93 |||||||||||||||||||| Sbjct: 105189 cagaggaggaggaagagagg 105170
>gb|AC069067.17| Homo sapiens 3 BAC RP11-454C18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172213 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cagaggaggaggaagagagg 93 |||||||||||||||||||| Sbjct: 29897 cagaggaggaggaagagagg 29878
>ref|NM_001030710.1| Gallus gallus similar to MGC68830 protein (LOC417509), mRNA Length = 3031 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 agaggaggaggaagagaggc 94 |||||||||||||||||||| Sbjct: 2725 agaggaggaggaagagaggc 2706
>ref|NM_001015912.1| Xenopus tropicalis CDC37 cell division cycle 37 homolog (S. cerevisiae) (cdc37), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 agaagtaacagaggaggaggaaga 89 ||||||||||||||||||| |||| Sbjct: 463 agaagtaacagaggaggagaaaga 486
>emb|BX294146.1| Pirellula sp. strain 1 complete genome; segment 14/24 Length = 324450 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 cgtcgcagaactcggagcac 416 |||||||||||||||||||| Sbjct: 236361 cgtcgcagaactcggagcac 236342
>emb|BX323026.5| Mouse DNA sequence from clone RP24-95F14 on chromosome 11 Contains the Ppm1d gene for magnesium-dependent protein phosphatase 1D delta isoform, the 5' end of the Bcas3 gene for breast carcinoma amplified sequence 3 and a CpG island, complete sequence Length = 130030 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gggaggtgcagctgtccctc 278 |||||||||||||||||||| Sbjct: 3014 gggaggtgcagctgtccctc 3033
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cagaggaggaggaagagagg 93 |||||||||||||||||||| Sbjct: 76776 cagaggaggaggaagagagg 76795
>emb|AJ719622.1| Gallus gallus mRNA for hypothetical protein, clone 4k12 Length = 3031 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 agaggaggaggaagagaggc 94 |||||||||||||||||||| Sbjct: 2725 agaggaggaggaagagaggc 2706
>dbj|BS000585.1| Pan troglodytes chromosome Y clone:PTB-582H02, complete sequence Length = 140513 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 agtactagccaagccattgt 61 |||||||||||||||||||| Sbjct: 84755 agtactagccaagccattgt 84774
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 agtactagccaagccattgt 61 |||||||||||||||||||| Sbjct: 20127228 agtactagccaagccattgt 20127209
>gb|AC105401.5| Homo sapiens BAC clone RP11-765K14 from 4, complete sequence Length = 30064 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 acagaggaggaggaagagag 92 |||||||||||||||||||| Sbjct: 11735 acagaggaggaggaagagag 11754
>gb|AC087258.14| Homo sapiens 12p BAC RP11-686N4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127018 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 taacagaggaggaggaagag 90 |||||||||||||||||||| Sbjct: 10039 taacagaggaggaggaagag 10020
>emb|CR522991.1| Gallus gallus finished cDNA, clone ChEST799i23 Length = 993 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 agaggaggaggaagagaggc 94 |||||||||||||||||||| Sbjct: 962 agaggaggaggaagagaggc 943
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aacagaggaggaggaagaga 91 |||||||||||||||||||| Sbjct: 49160 aacagaggaggaggaagaga 49179
>gb|AC123660.8| Mus musculus chromosome 3, clone RP23-196E24, complete sequence Length = 211632 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 taacagaggaggaggaagag 90 |||||||||||||||||||| Sbjct: 52307 taacagaggaggaggaagag 52326
>gb|AC017016.5|AC017016 Homo sapiens BAC clone RP11-152H13 from 3, complete sequence Length = 180681 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cagaggaggaggaagagagg 93 |||||||||||||||||||| Sbjct: 140318 cagaggaggaggaagagagg 140337
>gb|AF370621.1|AF370621 Arabidopsis thaliana xylglucan endo-transglycolsylase-like protein (T8F5.9) mRNA, complete cds Length = 849 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 gagatcgacttcgagttcttggggaaca 447 |||||||| |||||||||||||| |||| Sbjct: 310 gagatcgatttcgagttcttgggaaaca 337
>gb|AC006435.7|AC006435 Homo sapiens chromosome 17, clone RP5-59D14, complete sequence Length = 139267 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cagaggaggaggaagagagg 93 |||||||||||||||||||| Sbjct: 135775 cagaggaggaggaagagagg 135756
>gb|AC010972.3|AC010972 Homo sapiens clone RP11-133D3, complete sequence Length = 114637 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 agtactagccaagccattgt 61 |||||||||||||||||||| Sbjct: 84150 agtactagccaagccattgt 84169
>gb|AC147710.3| Pan troglodytes BAC clone CH251-473C15 from chromosome y, complete sequence Length = 200403 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 agtactagccaagccattgt 61 |||||||||||||||||||| Sbjct: 181072 agtactagccaagccattgt 181091
>gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 sequence, complete sequence Length = 88292 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 420 gagatcgacttcgagttcttggggaaca 447 |||||||| |||||||||||||| |||| Sbjct: 23747 gagatcgatttcgagttcttgggaaaca 23774
>gb|AC112666.9| Mus musculus chromosome 3, clone RP24-119D5, complete sequence Length = 193302 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 taacagaggaggaggaagag 90 |||||||||||||||||||| Sbjct: 114435 taacagaggaggaggaagag 114454
>gb|AC015799.23| Homo sapiens chromosome 17, clone RP11-135N5, complete sequence Length = 180157 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cagaggaggaggaagagagg 93 |||||||||||||||||||| Sbjct: 179480 cagaggaggaggaagagagg 179499
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 cgtcggcggcgactccgccg 372 |||||||||||||||||||| Sbjct: 117501 cgtcggcggcgactccgccg 117520
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ccgcgggggccctcctcgcc 131 |||||||||||||||||||| Sbjct: 79954 ccgcgggggccctcctcgcc 79935
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 atcgacttcgagttcttggg 442 |||||||||||||||||||| Sbjct: 34606 atcgacttcgagttcttggg 34587
>dbj|AK106075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H11, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 cgtcggcggcgactccgccg 372 |||||||||||||||||||| Sbjct: 657 cgtcggcggcgactccgccg 676
>dbj|AK099262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G05, full insert sequence Length = 1371 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 cgtcggcggcgactccgccg 372 |||||||||||||||||||| Sbjct: 669 cgtcggcggcgactccgccg 688
>dbj|AK070763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066M03, full insert sequence Length = 1378 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 cgtcggcggcgactccgccg 372 |||||||||||||||||||| Sbjct: 694 cgtcggcggcgactccgccg 713
>dbj|AK068398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L03, full insert sequence Length = 1100 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aacagaggaggaggaagaga 91 |||||||||||||||||||| Sbjct: 77 aacagaggaggaggaagaga 58
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 acagaggaggaggaagagag 92 |||||||||||||||||||| Sbjct: 613900 acagaggaggaggaagagag 613881
>emb|CR926424.1| Xenopus tropicalis finished cDNA, clone TGas127m02 Length = 1875 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 agaagtaacagaggaggaggaaga 89 ||||||||||||||||||| |||| Sbjct: 463 agaagtaacagaggaggagaaaga 486
>gb|AC159104.2| Mus musculus BAC clone RP23-246E2 from chromosome 13, complete sequence Length = 203694 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cagaggaggaggaagagagg 93 |||||||||||||||||||| Sbjct: 15108 cagaggaggaggaagagagg 15089
>gb|AC154246.3| Mus musculus BAC clone RP24-329G5 from chromosome 13, complete sequence Length = 177214 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cagaggaggaggaagagagg 93 |||||||||||||||||||| Sbjct: 110726 cagaggaggaggaagagagg 110745
>gb|AC111084.12| Mus musculus chromosome 7, clone RP23-143J24, complete sequence Length = 205564 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gaggaggaggaagagaggcc 95 |||||||||||||||||||| Sbjct: 136788 gaggaggaggaagagaggcc 136769
>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete sequence Length = 258789 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 agaggaggaggaagagaggc 94 |||||||||||||||||||| Sbjct: 180560 agaggaggaggaagagaggc 180579
>gb|AC141560.4| Mus musculus BAC clone RP23-425A5 from 12, complete sequence Length = 196665 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 agaggaggaggaagagaggccggc 98 |||||||||||| ||||||||||| Sbjct: 98156 agaggaggaggaggagaggccggc 98133
>emb|CT010516.6| Mouse DNA sequence from clone RP23-276H24 on chromosome 14, complete sequence Length = 194815 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gaggaggaggaagagaggcc 95 |||||||||||||||||||| Sbjct: 187557 gaggaggaggaagagaggcc 187538
>gb|AC134670.3| Homo sapiens chromosome 17, clone CTD-2283G11, complete sequence Length = 36100 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cagaggaggaggaagagagg 93 |||||||||||||||||||| Sbjct: 21478 cagaggaggaggaagagagg 21497 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,892,753 Number of Sequences: 3902068 Number of extensions: 3892753 Number of successful extensions: 141971 Number of sequences better than 10.0: 189 Number of HSP's better than 10.0 without gapping: 197 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140153 Number of HSP's gapped (non-prelim): 1804 length of query: 501 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 479 effective length of database: 17,147,199,772 effective search space: 8213508690788 effective search space used: 8213508690788 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
