ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart42h04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468355.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1440 Score = 127 bits (64), Expect = 4e-26 Identities = 196/238 (82%), Gaps = 9/238 (3%) Strand = Plus / Plus Query: 102 gcctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcc 161 ||||||||||||||||||||||||||||||||| | ||||||||| ||| ||| || Sbjct: 25 gcctgcgagatcgcgcgcctgccggaggagctcctggtggcggcgctctccctcacctcg 84 Query: 162 ccgcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactcc 221 ||||| || || ||| | ||||||||||| | || | |||||||||||| ||||||||| Sbjct: 85 ccgcgggacgcgtgcagcgccgccgcggtctgccgcgacttccgcgccgccgccgactcc 144 Query: 222 gacgacgtctgggcccgcttcctgccccccggcggcctcccgccgctcgccgacggggag 281 |||| ||||||| |||||||||| |||| ||| |||||||| ||||||||||| ||| Sbjct: 145 gacgccgtctggtcccgcttccttcccc---gcgacctcccgcgcctcgccgacggcgag 201 Query: 282 gtcgccgtccccgccccgccatcctccaagaaggagctcttcctccgcctctccgccg 339 || |||||| ||||| | |||| ||||| ||||||||||||||||||||||| Sbjct: 202 ctc----tccccg--ccgccgccgtccacgaaggggctcttcctccgcctctccgccg 253 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 aagtgctacatgctgtccgccagg 422 ||||||||||||||||| |||||| Sbjct: 958 aagtgctacatgctgtcggccagg 981
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 127 bits (64), Expect = 4e-26 Identities = 196/238 (82%), Gaps = 9/238 (3%) Strand = Plus / Plus Query: 102 gcctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcc 161 ||||||||||||||||||||||||||||||||| | ||||||||| ||| ||| || Sbjct: 34816798 gcctgcgagatcgcgcgcctgccggaggagctcctggtggcggcgctctccctcacctcg 34816857 Query: 162 ccgcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactcc 221 ||||| || || ||| | ||||||||||| | || | |||||||||||| ||||||||| Sbjct: 34816858 ccgcgggacgcgtgcagcgccgccgcggtctgccgcgacttccgcgccgccgccgactcc 34816917 Query: 222 gacgacgtctgggcccgcttcctgccccccggcggcctcccgccgctcgccgacggggag 281 |||| ||||||| |||||||||| |||| ||| |||||||| ||||||||||| ||| Sbjct: 34816918 gacgccgtctggtcccgcttccttcccc---gcgacctcccgcgcctcgccgacggcgag 34816974 Query: 282 gtcgccgtccccgccccgccatcctccaagaaggagctcttcctccgcctctccgccg 339 || |||||| ||||| | |||| ||||| ||||||||||||||||||||||| Sbjct: 34816975 ctc----tccccg--ccgccgccgtccacgaaggggctcttcctccgcctctccgccg 34817026 Score = 117 bits (59), Expect = 3e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 161 cccgcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactc 220 ||||||||| |||||||| ||| |||| || |||||||||||||||||||| |||||||| Sbjct: 34843335 cccgcgcgacgcctgccgcgcctccgccgtctccccggccttccgcgccgccgccgactc 34843394 Query: 221 cgacgacgtctgggcccgcttcctgcc 247 ||||||||||||| ||||||||||||| Sbjct: 34843395 cgacgacgtctggtcccgcttcctgcc 34843421 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 105 tgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtccccg 164 |||||||||||||| |||||||||||||| |||| || ||| | ||| ||| | ||| Sbjct: 34836285 tgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctccctcaccgcgccg 34836344 Query: 165 cgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccgac 224 || || |||| ||| |||||||| || |||| ||||||||||||||| |||||||||||| Sbjct: 34836345 cgggacgccttccgcgccgccgccgtctcccgggccttccgcgccgccgccgactccgac 34836404 Query: 225 gacgtctgggcccgcttcctgcc 247 | ||||||||| |||||||||| Sbjct: 34836405 gccgtctgggctagcttcctgcc 34836427 Score = 95.6 bits (48), Expect = 1e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcccc 163 ||||||||||||||| |||||||||||||| |||| || ||| | | | | | || || Sbjct: 34852490 ctgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctcacgcgcctcgcc 34852549 Query: 164 gcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccga 223 ||| || ||||||| |||||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 34852550 gcgggacgcctgccacgccgccgccgtctccccggcgttccgcgccgccgccgactccga 34852609 Query: 224 cgacgtctgggcccgcttcctgcc 247 || ||||||||| |||||||||| Sbjct: 34852610 cgccgtctgggctagcttcctgcc 34852633 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggcc 342 ||||||||||| ||||||||||||||||||||||||| Sbjct: 34836477 tccaagaaggacctcttcctccgcctctccgccggcc 34836513 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 174 tgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccgacgacgtctgg 233 ||||| |||||||| || |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 34820655 tgccgcgccgccgccgtctccccggccttccgcgccatcgccgactccgacgtcgtctgg 34820714 Query: 234 g 234 | Sbjct: 34820715 g 34820715 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 203 ccgcgccgcggccgactccgacgacgtctgggcccgcttcctgccccccggc 254 ||||||||| ||||||||||||| ||||||| |||||||||| |||| |||| Sbjct: 34839941 ccgcgccgccgccgactccgacgccgtctggtcccgcttccttccccgcggc 34839992 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 189 gtgtccccggccttccgcgccgcggccgactccgacgacgtctgggcccgcttcctgccc 248 ||||| ||||| ||||| ||||| ||||||||||||| |||||||| | ||||||| ||| Sbjct: 34812959 gtgtcgccggcgttccgggccgccgccgactccgacgccgtctgggacagcttcctcccc 34813018 Query: 249 cccg 252 |||| Sbjct: 34813019 cccg 34813022 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccg 336 ||||||||||||||||||||||||||||||| Sbjct: 34852683 tccaagaaggagctcttcctccgcctctccg 34852713 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 368 gagcgtgtggctggacagggagaccggcgccaagtgctacatgctgtccgccagg 422 |||| ||||| |||||||||||| |||||||||||||||||||| || |||||| Sbjct: 34840227 gagcatgtggttggacagggagaagggcgccaagtgctacatgctctcggccagg 34840281 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 105 tgcgagatcgcgcgcctgccggaggagctc 134 |||||||||||||||||||||||||||||| Sbjct: 34839870 tgcgagatcgcgcgcctgccggaggagctc 34839899 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 373 tgtggctggacagggagaccggcgccaagtgctacatgctgtccgccag 421 ||||| ||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 34852875 tgtggttggacagggagactggggccaagtgctacatgctctcggccag 34852923 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgccggaggagctcgtctcggcgg 144 ||||||||||||||||||||||| ||||||| |||| |||| Sbjct: 34843272 ctgcgagatcgcgcgcctgccggtggagctcctctccgcgg 34843312 Score = 50.1 bits (25), Expect = 0.007 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggcc 342 ||||||||||||| |||||| |||||||||||||||| Sbjct: 34820781 tccaagaaggagcgcttcct-cgcctctccgccggcc 34820816 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 379 tggacagggagaccggcgccaagtgcta 406 |||||||||||||||| ||||||||||| Sbjct: 34837165 tggacagggagaccggggccaagtgcta 34837192 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccg 336 ||||| |||| |||||||||||||||||||| Sbjct: 34843471 tccaacaaggcgctcttcctccgcctctccg 34843501 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 368 gagcgtgtggctggacagggagaccggcgccaagtgctacatgctgtccgccagg 422 |||| ||||| |||| ||||||| |||| ||||||||||||||| || |||||| Sbjct: 34817215 gagcatgtggttggagagggagaagggcggcaagtgctacatgctctcggccagg 34817269 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 381 gacagggagaccggcgccaagtgcta 406 |||||||||||||| ||||||||||| Sbjct: 34843652 gacagggagaccggggccaagtgcta 34843677 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 373 tgtggctggacagggagaccggcgccaagtgctacatgctgtccgccagg 422 ||||| ||||||||||||| || ||||||||||||||||| |||||| Sbjct: 34841664 tgtggttggacagggagactggttttaagtgctacatgctgtcggccagg 34841713 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 448 cgccgcagtactggacctggatcccgctcg 477 ||||||||||||||| ||||||||| |||| Sbjct: 34840307 cgccgcagtactggagctggatccctctcg 34840336 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 304 cctccaagaaggagctcttcctccgcctctccgccggccccgccctcctc 353 ||||||||||||| |||||| |||||||| || | |||||| ||||||| Sbjct: 34813080 cctccaagaaggacctcttcgcccgcctctgcggccgccccgtcctcctc 34813129 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgc 337 |||| ||||| || |||||||||||||||||| Sbjct: 34840044 tccaggaaggcgcacttcctccgcctctccgc 34840075 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 aagtgctacatgctgtccgccagg 422 ||||||||||||||||| |||||| Sbjct: 34818790 aagtgctacatgctgtcggccagg 34818813 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gctcgtctcggcggcgctgg 150 |||||||||||||||||||| Sbjct: 25411106 gctcgtctcggcggcgctgg 25411087
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 127 bits (64), Expect = 4e-26 Identities = 196/238 (82%), Gaps = 9/238 (3%) Strand = Plus / Plus Query: 102 gcctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcc 161 ||||||||||||||||||||||||||||||||| | ||||||||| ||| ||| || Sbjct: 134646 gcctgcgagatcgcgcgcctgccggaggagctcctggtggcggcgctctccctcacctcg 134705 Query: 162 ccgcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactcc 221 ||||| || || ||| | ||||||||||| | || | |||||||||||| ||||||||| Sbjct: 134706 ccgcgggacgcgtgcagcgccgccgcggtctgccgcgacttccgcgccgccgccgactcc 134765 Query: 222 gacgacgtctgggcccgcttcctgccccccggcggcctcccgccgctcgccgacggggag 281 |||| ||||||| |||||||||| |||| ||| |||||||| ||||||||||| ||| Sbjct: 134766 gacgccgtctggtcccgcttccttcccc---gcgacctcccgcgcctcgccgacggcgag 134822 Query: 282 gtcgccgtccccgccccgccatcctccaagaaggagctcttcctccgcctctccgccg 339 || |||||| ||||| | |||| ||||| ||||||||||||||||||||||| Sbjct: 134823 ctc----tccccg--ccgccgccgtccacgaaggggctcttcctccgcctctccgccg 134874 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 189 gtgtccccggccttccgcgccgcggccgactccgacgacgtctgggcccgcttcctgccc 248 ||||| ||||| ||||| ||||| ||||||||||||| |||||||| | ||||||| ||| Sbjct: 130807 gtgtcgccggcgttccgggccgccgccgactccgacgccgtctgggacagcttcctcccc 130866 Query: 249 cccg 252 |||| Sbjct: 130867 cccg 130870 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 304 cctccaagaaggagctcttcctccgcctctccgccggccccgccctcctc 353 ||||||||||||| |||||| |||||||| || | |||||| ||||||| Sbjct: 130928 cctccaagaaggacctcttcgcccgcctctgcggccgccccgtcctcctc 130977
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 127 bits (64), Expect = 4e-26 Identities = 196/238 (82%), Gaps = 9/238 (3%) Strand = Plus / Plus Query: 102 gcctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcc 161 ||||||||||||||||||||||||||||||||| | ||||||||| ||| ||| || Sbjct: 38393 gcctgcgagatcgcgcgcctgccggaggagctcctggtggcggcgctctccctcacctcg 38452 Query: 162 ccgcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactcc 221 ||||| || || ||| | ||||||||||| | || | |||||||||||| ||||||||| Sbjct: 38453 ccgcgggacgcgtgcagcgccgccgcggtctgccgcgacttccgcgccgccgccgactcc 38512 Query: 222 gacgacgtctgggcccgcttcctgccccccggcggcctcccgccgctcgccgacggggag 281 |||| ||||||| |||||||||| |||| ||| |||||||| ||||||||||| ||| Sbjct: 38513 gacgccgtctggtcccgcttccttcccc---gcgacctcccgcgcctcgccgacggcgag 38569 Query: 282 gtcgccgtccccgccccgccatcctccaagaaggagctcttcctccgcctctccgccg 339 || |||||| ||||| | |||| ||||| ||||||||||||||||||||||| Sbjct: 38570 ctc----tccccg--ccgccgccgtccacgaaggggctcttcctccgcctctccgccg 38621 Score = 117 bits (59), Expect = 3e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 161 cccgcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactc 220 ||||||||| |||||||| ||| |||| || |||||||||||||||||||| |||||||| Sbjct: 64930 cccgcgcgacgcctgccgcgcctccgccgtctccccggccttccgcgccgccgccgactc 64989 Query: 221 cgacgacgtctgggcccgcttcctgcc 247 ||||||||||||| ||||||||||||| Sbjct: 64990 cgacgacgtctggtcccgcttcctgcc 65016 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 105 tgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtccccg 164 |||||||||||||| |||||||||||||| |||| || ||| | ||| ||| | ||| Sbjct: 57880 tgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctccctcaccgcgccg 57939 Query: 165 cgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccgac 224 || || |||| ||| |||||||| || |||| ||||||||||||||| |||||||||||| Sbjct: 57940 cgggacgccttccgcgccgccgccgtctcccgggccttccgcgccgccgccgactccgac 57999 Query: 225 gacgtctgggcccgcttcctgcc 247 | ||||||||| |||||||||| Sbjct: 58000 gccgtctgggctagcttcctgcc 58022 Score = 95.6 bits (48), Expect = 1e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcccc 163 ||||||||||||||| |||||||||||||| |||| || ||| | | | | | || || Sbjct: 74085 ctgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctcacgcgcctcgcc 74144 Query: 164 gcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccga 223 ||| || ||||||| |||||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 74145 gcgggacgcctgccacgccgccgccgtctccccggcgttccgcgccgccgccgactccga 74204 Query: 224 cgacgtctgggcccgcttcctgcc 247 || ||||||||| |||||||||| Sbjct: 74205 cgccgtctgggctagcttcctgcc 74228 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggcc 342 ||||||||||| ||||||||||||||||||||||||| Sbjct: 58072 tccaagaaggacctcttcctccgcctctccgccggcc 58108 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 174 tgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccgacgacgtctgg 233 ||||| |||||||| || |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 42250 tgccgcgccgccgccgtctccccggccttccgcgccatcgccgactccgacgtcgtctgg 42309 Query: 234 g 234 | Sbjct: 42310 g 42310 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 203 ccgcgccgcggccgactccgacgacgtctgggcccgcttcctgccccccggc 254 ||||||||| ||||||||||||| ||||||| |||||||||| |||| |||| Sbjct: 61536 ccgcgccgccgccgactccgacgccgtctggtcccgcttccttccccgcggc 61587 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 189 gtgtccccggccttccgcgccgcggccgactccgacgacgtctgggcccgcttcctgccc 248 ||||| ||||| ||||| ||||| ||||||||||||| |||||||| | ||||||| ||| Sbjct: 34554 gtgtcgccggcgttccgggccgccgccgactccgacgccgtctgggacagcttcctcccc 34613 Query: 249 cccg 252 |||| Sbjct: 34614 cccg 34617 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccg 336 ||||||||||||||||||||||||||||||| Sbjct: 74278 tccaagaaggagctcttcctccgcctctccg 74308 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 368 gagcgtgtggctggacagggagaccggcgccaagtgctacatgctgtccgccagg 422 |||| ||||| |||||||||||| |||||||||||||||||||| || |||||| Sbjct: 61822 gagcatgtggttggacagggagaagggcgccaagtgctacatgctctcggccagg 61876 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 105 tgcgagatcgcgcgcctgccggaggagctc 134 |||||||||||||||||||||||||||||| Sbjct: 61465 tgcgagatcgcgcgcctgccggaggagctc 61494 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 373 tgtggctggacagggagaccggcgccaagtgctacatgctgtccgccag 421 ||||| ||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 74470 tgtggttggacagggagactggggccaagtgctacatgctctcggccag 74518 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgccggaggagctcgtctcggcgg 144 ||||||||||||||||||||||| ||||||| |||| |||| Sbjct: 64867 ctgcgagatcgcgcgcctgccggtggagctcctctccgcgg 64907 Score = 50.1 bits (25), Expect = 0.007 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggcc 342 ||||||||||||| |||||| |||||||||||||||| Sbjct: 42376 tccaagaaggagcgcttcct-cgcctctccgccggcc 42411 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 379 tggacagggagaccggcgccaagtgcta 406 |||||||||||||||| ||||||||||| Sbjct: 58760 tggacagggagaccggggccaagtgcta 58787 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccg 336 ||||| |||| |||||||||||||||||||| Sbjct: 65066 tccaacaaggcgctcttcctccgcctctccg 65096 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 368 gagcgtgtggctggacagggagaccggcgccaagtgctacatgctgtccgccagg 422 |||| ||||| |||| ||||||| |||| ||||||||||||||| || |||||| Sbjct: 38810 gagcatgtggttggagagggagaagggcggcaagtgctacatgctctcggccagg 38864 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 381 gacagggagaccggcgccaagtgcta 406 |||||||||||||| ||||||||||| Sbjct: 65247 gacagggagaccggggccaagtgcta 65272 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 373 tgtggctggacagggagaccggcgccaagtgctacatgctgtccgccagg 422 ||||| ||||||||||||| || ||||||||||||||||| |||||| Sbjct: 63259 tgtggttggacagggagactggttttaagtgctacatgctgtcggccagg 63308 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 448 cgccgcagtactggacctggatcccgctcg 477 ||||||||||||||| ||||||||| |||| Sbjct: 61902 cgccgcagtactggagctggatccctctcg 61931 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 304 cctccaagaaggagctcttcctccgcctctccgccggccccgccctcctc 353 ||||||||||||| |||||| |||||||| || | |||||| ||||||| Sbjct: 34675 cctccaagaaggacctcttcgcccgcctctgcggccgccccgtcctcctc 34724 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgc 337 |||| ||||| || |||||||||||||||||| Sbjct: 61639 tccaggaaggcgcacttcctccgcctctccgc 61670 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 aagtgctacatgctgtccgccagg 422 ||||||||||||||||| |||||| Sbjct: 40385 aagtgctacatgctgtcggccagg 40408
>gb|BT018973.1| Zea mays clone Contig385.F mRNA sequence Length = 1282 Score = 117 bits (59), Expect = 3e-23 Identities = 128/151 (84%) Strand = Plus / Plus Query: 102 gcctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcc 161 |||||||||||||||||||||||||| || ||| | ||||||||||| | || ||| Sbjct: 142 gcctgcgagatcgcgcgcctgccggatgacctcctgtcggcggcgctcggccggacgggg 201 Query: 162 ccgcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactcc 221 |||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| || Sbjct: 202 ccgctggacgcctgccgcgccgccgcggtctcgccggcctttcgcgccgcggccgacgcc 261 Query: 222 gacgacgtctgggcccgcttcctgccccccg 252 |||| ||||||| || |||||||||| |||| Sbjct: 262 gacgccgtctggtccagcttcctgccgcccg 292 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 368 gagcgtgtggctggacagggagaccggcgccaagtgctacatgctgtccgccaggaacct 427 |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| || Sbjct: 408 gagcatgtggctggacagggccaccgtggccaagtgctacatgctgtccgccaggaagct 467 Query: 428 cttcatcgtgtggggtgacacgccgcagtactggacctggatccc 472 |||| | |||||||| ||||||||||||||| ||||||||| Sbjct: 468 gaccatcatatggggtgatacgccgcagtactggcactggatccc 512
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 117 bits (59), Expect = 3e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 161 cccgcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactc 220 ||||||||| |||||||| ||| |||| || |||||||||||||||||||| |||||||| Sbjct: 2832 cccgcgcgacgcctgccgcgcctccgccgtctccccggccttccgcgccgccgccgactc 2891 Query: 221 cgacgacgtctgggcccgcttcctgcc 247 ||||||||||||| ||||||||||||| Sbjct: 2892 cgacgacgtctggtcccgcttcctgcc 2918 Score = 95.6 bits (48), Expect = 1e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcccc 163 ||||||||||||||| |||||||||||||| |||| || ||| | | | | | || || Sbjct: 11987 ctgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctcacgcgcctcgcc 12046 Query: 164 gcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccga 223 ||| || ||||||| |||||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 12047 gcgggacgcctgccacgccgccgccgtctccccggcgttccgcgccgccgccgactccga 12106 Query: 224 cgacgtctgggcccgcttcctgcc 247 || ||||||||| |||||||||| Sbjct: 12107 cgccgtctgggctagcttcctgcc 12130 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccg 336 ||||||||||||||||||||||||||||||| Sbjct: 12180 tccaagaaggagctcttcctccgcctctccg 12210 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 373 tgtggctggacagggagaccggcgccaagtgctacatgctgtccgccag 421 ||||| ||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 12372 tgtggttggacagggagactggggccaagtgctacatgctctcggccag 12420 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgccggaggagctcgtctcggcgg 144 ||||||||||||||||||||||| ||||||| |||| |||| Sbjct: 2769 ctgcgagatcgcgcgcctgccggtggagctcctctccgcgg 2809 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccg 336 ||||| |||| |||||||||||||||||||| Sbjct: 2968 tccaacaaggcgctcttcctccgcctctccg 2998 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 381 gacagggagaccggcgccaagtgcta 406 |||||||||||||| ||||||||||| Sbjct: 3149 gacagggagaccggggccaagtgcta 3174 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 373 tgtggctggacagggagaccggcgccaagtgctacatgctgtccgccagg 422 ||||| ||||||||||||| || ||||||||||||||||| |||||| Sbjct: 1161 tgtggttggacagggagactggttttaagtgctacatgctgtcggccagg 1210
>ref|XM_468358.1| Oryza sativa (japonica cultivar-group), mRNA Length = 591 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 105 tgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtccccg 164 |||||||||||||| |||||||||||||| |||| || ||| | ||| ||| | ||| Sbjct: 34 tgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctccctcaccgcgccg 93 Query: 165 cgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccgac 224 || || |||| ||| |||||||| || |||| ||||||||||||||| |||||||||||| Sbjct: 94 cgggacgccttccgcgccgccgccgtctcccgggccttccgcgccgccgccgactccgac 153 Query: 225 gacgtctgggcccgcttcctgcc 247 | ||||||||| |||||||||| Sbjct: 154 gccgtctgggctagcttcctgcc 176 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggcc 342 ||||||||||| ||||||||||||||||||||||||| Sbjct: 226 tccaagaaggacctcttcctccgcctctccgccggcc 262
>dbj|AK110304.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-A09, full insert sequence Length = 2585 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 105 tgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtccccg 164 |||||||||||||| |||||||||||||| |||| || ||| | ||| ||| | ||| Sbjct: 1507 tgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctccctcaccgcgccg 1566 Query: 165 cgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccgac 224 || || |||| ||| |||||||| || |||| ||||||||||||||| |||||||||||| Sbjct: 1567 cgggacgccttccgcgccgccgccgtctcccgggccttccgcgccgccgccgactccgac 1626 Query: 225 gacgtctgggcccgcttcctgcc 247 | ||||||||| |||||||||| Sbjct: 1627 gccgtctgggctagcttcctgcc 1649 Score = 75.8 bits (38), Expect = 1e-10 Identities = 88/104 (84%), Gaps = 3/104 (2%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggccccgccctcctccag---gacagg 362 ||||||||||| ||||||||||||||||||||||||| | || ||||| | |||||| Sbjct: 1699 tccaagaaggacctcttcctccgcctctccgccggccactaccacctcctgccagacagg 1758 Query: 363 ctcgtgagcgtgtggctggacagggagaccggcgccaagtgcta 406 ||| | || |||| |||||||||||||||| ||||||||||| Sbjct: 1759 ctcaagggcatgtgattggacagggagaccggggccaagtgcta 1802
>ref|XM_468361.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggccccgccctcctccaggacaggctc 365 ||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||| Sbjct: 228 tccaagaaggagctcttcctccgcctctccgatggcccctacctcctatcagaccggctc 287 Query: 366 gtgagcgtgtggctggacagggagaccggcgccaagtgctacatgctgtccgccag 421 |||| ||||| ||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 288 atgagtatgtggttggacagggagactggggccaagtgctacatgctctcggccag 343 Score = 95.6 bits (48), Expect = 1e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcccc 163 ||||||||||||||| |||||||||||||| |||| || ||| | | | | | || || Sbjct: 35 ctgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctcacgcgcctcgcc 94 Query: 164 gcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccga 223 ||| || ||||||| |||||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 95 gcgggacgcctgccacgccgccgccgtctccccggcgttccgcgccgccgccgactccga 154 Query: 224 cgacgtctgggcccgcttcctgcc 247 || ||||||||| |||||||||| Sbjct: 155 cgccgtctgggctagcttcctgcc 178
>ref|XM_507040.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0053L11.25 mRNA Length = 1168 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggccccgccctcctccaggacaggctc 365 ||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||| Sbjct: 306 tccaagaaggagctcttcctccgcctctccgatggcccctacctcctatcagaccggctc 365 Query: 366 gtgagcgtgtggctggacagggagaccggcgccaagtgctacatgctgtccgccag 421 |||| ||||| ||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 366 atgagtatgtggttggacagggagactggggccaagtgctacatgctctcggccag 421 Score = 95.6 bits (48), Expect = 1e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcccc 163 ||||||||||||||| |||||||||||||| |||| || ||| | | | | | || || Sbjct: 113 ctgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctcacgcgcctcgcc 172 Query: 164 gcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccga 223 ||| || ||||||| |||||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 173 gcgggacgcctgccacgccgccgccgtctccccggcgttccgcgccgccgccgactccga 232 Query: 224 cgacgtctgggcccgcttcctgcc 247 || ||||||||| |||||||||| Sbjct: 233 cgccgtctgggctagcttcctgcc 256
>dbj|AK098981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092F18, full insert sequence Length = 1080 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggccccgccctcctccaggacaggctc 365 ||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||| Sbjct: 228 tccaagaaggagctcttcctccgcctctccgatggcccctacctcctatcagaccggctc 287 Query: 366 gtgagcgtgtggctggacagggagaccggcgccaagtgctacatgctgtccgccag 421 |||| ||||| ||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 288 atgagtatgtggttggacagggagactggggccaagtgctacatgctctcggccag 343 Score = 95.6 bits (48), Expect = 1e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcccc 163 ||||||||||||||| |||||||||||||| |||| || ||| | | | | | || || Sbjct: 35 ctgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctcacgcgcctcgcc 94 Query: 164 gcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccga 223 ||| || ||||||| |||||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 95 gcgggacgcctgccacgccgccgccgtctccccggcgttccgcgccgccgccgactccga 154 Query: 224 cgacgtctgggcccgcttcctgcc 247 || ||||||||| |||||||||| Sbjct: 155 cgccgtctgggctagcttcctgcc 178
>dbj|AK060823.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B03, full insert sequence Length = 1168 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggccccgccctcctccaggacaggctc 365 ||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||| Sbjct: 306 tccaagaaggagctcttcctccgcctctccgatggcccctacctcctatcagaccggctc 365 Query: 366 gtgagcgtgtggctggacagggagaccggcgccaagtgctacatgctgtccgccag 421 |||| ||||| ||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 366 atgagtatgtggttggacagggagactggggccaagtgctacatgctctcggccag 421 Score = 95.6 bits (48), Expect = 1e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgccggaggagctcgtctcggcggcgctggcccacacgtcccc 163 ||||||||||||||| |||||||||||||| |||| || ||| | | | | | || || Sbjct: 113 ctgcgagatcgcgcggttgccggaggagctcctctccgccgcgatctcacgcgcctcgcc 172 Query: 164 gcgcgatgcctgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccga 223 ||| || ||||||| |||||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 173 gcgggacgcctgccacgccgccgccgtctccccggcgttccgcgccgccgccgactccga 232 Query: 224 cgacgtctgggcccgcttcctgcc 247 || ||||||||| |||||||||| Sbjct: 233 cgccgtctgggctagcttcctgcc 256
>ref|XM_468356.1| Oryza sativa (japonica cultivar-group), mRNA Length = 417 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 174 tgccgggccgccgcggtgtccccggccttccgcgccgcggccgactccgacgacgtctgg 233 ||||| |||||||| || |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 79 tgccgcgccgccgccgtctccccggccttccgcgccatcgccgactccgacgtcgtctgg 138 Query: 234 g 234 | Sbjct: 139 g 139 Score = 50.1 bits (25), Expect = 0.007 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggcc 342 ||||||||||||| |||||| |||||||||||||||| Sbjct: 205 tccaagaaggagcgcttcct-cgcctctccgccggcc 240
>ref|XM_468359.1| Oryza sativa (japonica cultivar-group), mRNA Length = 711 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctctccgccggccccgccctcctccaggacaggctc 365 |||| ||||| || |||||||||||||||||| || ||| ||||||| || ||| Sbjct: 199 tccaggaaggcgcacttcctccgcctctccgctggaccccttctcctcccacgcaaactc 258 Query: 366 gtgagcgtgtggctggacagggagaccggcgccaagtgctacatgctgtccgccagg 422 ||||| ||||| |||||||||||| |||||||||||||||||||| || |||||| Sbjct: 259 atgagcatgtggttggacagggagaagggcgccaagtgctacatgctctcggccagg 315 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 203 ccgcgccgcggccgactccgacgacgtctgggcccgcttcctgccccccggc 254 ||||||||| ||||||||||||| ||||||| |||||||||| |||| |||| Sbjct: 96 ccgcgccgccgccgactccgacgccgtctggtcccgcttccttccccgcggc 147 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 105 tgcgagatcgcgcgcctgccggaggagctc 134 |||||||||||||||||||||||||||||| Sbjct: 25 tgcgagatcgcgcgcctgccggaggagctc 54 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 448 cgccgcagtactggacctggatcccgctcg 477 ||||||||||||||| ||||||||| |||| Sbjct: 341 cgccgcagtactggagctggatccctctcg 370
>ref|XM_468354.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1522 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 189 gtgtccccggccttccgcgccgcggccgactccgacgacgtctgggcccgcttcctgccc 248 ||||| ||||| ||||| ||||| ||||||||||||| |||||||| | ||||||| ||| Sbjct: 222 gtgtcgccggcgttccgggccgccgccgactccgacgccgtctgggacagcttcctcccc 281 Query: 249 cccg 252 |||| Sbjct: 282 cccg 285 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 304 cctccaagaaggagctcttcctccgcctctccgccggccccgccctcctc 353 ||||||||||||| |||||| |||||||| || | |||||| ||||||| Sbjct: 343 cctccaagaaggacctcttcgcccgcctctgcggccgccccgtcctcctc 392
>dbj|AK106918.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B02, full insert sequence Length = 1522 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 189 gtgtccccggccttccgcgccgcggccgactccgacgacgtctgggcccgcttcctgccc 248 ||||| ||||| ||||| ||||| ||||||||||||| |||||||| | ||||||| ||| Sbjct: 222 gtgtcgccggcgttccgggccgccgccgactccgacgccgtctgggacagcttcctcccc 281 Query: 249 cccg 252 |||| Sbjct: 282 cccg 285 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 304 cctccaagaaggagctcttcctccgcctctccgccggccccgccctcctc 353 ||||||||||||| |||||| |||||||| || | |||||| ||||||| Sbjct: 343 cctccaagaaggacctcttcgcccgcctctgcggccgccccgtcctcctc 392
>ref|XM_481760.1| Oryza sativa (japonica cultivar-group), mRNA Length = 957 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 200 cttccgcgccgcggccgactccgacgacgtctgggcccgcttcctgcccc 249 |||||||||||| ||||||||||||| |||| || |||||||||| |||| Sbjct: 181 cttccgcgccgccgccgactccgacgccgtcaggtcccgcttccttcccc 132 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 105 tgcgagatcgcgcgcctgccggaggagctc 134 ||||||||||||||||| |||||||||||| Sbjct: 254 tgcgagatcgcgcgccttccggaggagctc 225
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 200 cttccgcgccgcggccgactccgacgacgtctgggcccgcttcctgcccc 249 |||||||||||| ||||||||||||| |||| || |||||||||| |||| Sbjct: 15323950 cttccgcgccgccgccgactccgacgccgtcaggtcccgcttccttcccc 15323999 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 105 tgcgagatcgcgcgcctgccggaggagctc 134 ||||||||||||||||| |||||||||||| Sbjct: 15323877 tgcgagatcgcgcgccttccggaggagctc 15323906 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 183 gccgcggtgtccccggccttccgcgccgcggccgactccgacgacgtctgggcccgcttc 242 ||||| ||||| ||| | |||||||||||||| || || |||| |||||||| ||||||| Sbjct: 2912481 gccgccgtgtcgccgtcgttccgcgccgcggcggagtcggacgccgtctgggaccgcttc 2912540 Query: 243 ct 244 || Sbjct: 2912541 ct 2912542 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctct 333 |||| ||||||||||||||||||||||| Sbjct: 15324044 tccatgaaggagctcttcctccgcctct 15324071
>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0062G05 Length = 152802 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 200 cttccgcgccgcggccgactccgacgacgtctgggcccgcttcctgcccc 249 |||||||||||| ||||||||||||| |||| || |||||||||| |||| Sbjct: 109581 cttccgcgccgccgccgactccgacgccgtcaggtcccgcttccttcccc 109630 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 105 tgcgagatcgcgcgcctgccggaggagctc 134 ||||||||||||||||| |||||||||||| Sbjct: 109508 tgcgagatcgcgcgccttccggaggagctc 109537 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctct 333 |||| ||||||||||||||||||||||| Sbjct: 109675 tccatgaaggagctcttcctccgcctct 109702
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 200 cttccgcgccgcggccgactccgacgacgtctgggcccgcttcctgcccc 249 |||||||||||| ||||||||||||| |||| || |||||||||| |||| Sbjct: 9526 cttccgcgccgccgccgactccgacgccgtcaggtcccgcttccttcccc 9575 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 105 tgcgagatcgcgcgcctgccggaggagctc 134 ||||||||||||||||| |||||||||||| Sbjct: 9453 tgcgagatcgcgcgccttccggaggagctc 9482 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 306 tccaagaaggagctcttcctccgcctct 333 |||| ||||||||||||||||||||||| Sbjct: 9620 tccatgaaggagctcttcctccgcctct 9647
>ref|XM_480119.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1133 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 183 gccgcggtgtccccggccttccgcgccgcggccgactccgacgacgtctgggcccgcttc 242 ||||| ||||| ||| | |||||||||||||| || || |||| |||||||| ||||||| Sbjct: 190 gccgccgtgtcgccgtcgttccgcgccgcggcggagtcggacgccgtctgggaccgcttc 249 Query: 243 ct 244 || Sbjct: 250 ct 251
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 183 gccgcggtgtccccggccttccgcgccgcggccgactccgacgacgtctgggcccgcttc 242 ||||| ||||| ||| | |||||||||||||| || || |||| |||||||| ||||||| Sbjct: 85543 gccgccgtgtcgccgtcgttccgcgccgcggcggagtcggacgccgtctgggaccgcttc 85602 Query: 243 ct 244 || Sbjct: 85603 ct 85604
>dbj|AK109659.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-G02, full insert sequence Length = 1135 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 183 gccgcggtgtccccggccttccgcgccgcggccgactccgacgacgtctgggcccgcttc 242 ||||| ||||| ||| | |||||||||||||| || || |||| |||||||| ||||||| Sbjct: 192 gccgccgtgtcgccgtcgttccgcgccgcggcggagtcggacgccgtctgggaccgcttc 251 Query: 243 ct 244 || Sbjct: 252 ct 253
>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region Length = 108553 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 103 cctgcgagatcgcgcgcctgccgga 127 ||||||||||||||||||||||||| Sbjct: 1370 cctgcgagatcgcgcgcctgccgga 1346
>gb|AF527807.1| Sorghum bicolor clone BAC SB_BBc0126P21 php200725 orthologous region Length = 75840 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 103 cctgcgagatcgcgcgcctgccgga 127 ||||||||||||||||||||||||| Sbjct: 69543 cctgcgagatcgcgcgcctgccgga 69519
>gb|AC005083.1| Homo sapiens BAC clone CTA-281G5 from 7, complete sequence Length = 146285 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 305 ctccaagaaggagctcttcctc 326 |||||||||||||||||||||| Sbjct: 117784 ctccaagaaggagctcttcctc 117763
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 cggggaggtcgccgtccccgcc 296 |||||||||||||||||||||| Sbjct: 239333 cggggaggtcgccgtccccgcc 239354
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 248 ccccggcggcctcccgccgctcgccg 273 |||||||| ||||||||||||||||| Sbjct: 20175016 ccccggcgacctcccgccgctcgccg 20175041 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 agctcttcctccgcctctccgccg 339 ||||| |||||||||||||||||| Sbjct: 27447210 agctcctcctccgcctctccgccg 27447187 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 247 cccccggcggcctcccgccgctcgccgacggg 278 |||||||| ||||||||||||| |||| |||| Sbjct: 13188548 cccccggccgcctcccgccgctggccggcggg 13188517
>dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0007G12 Length = 111819 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 248 ccccggcggcctcccgccgctcgccg 273 |||||||| ||||||||||||||||| Sbjct: 41016 ccccggcgacctcccgccgctcgccg 41041
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 265 cgctcgccgacggggaggtcgccgtc 290 ||||||||||||| |||||||||||| Sbjct: 2208809 cgctcgccgacggcgaggtcgccgtc 2208784
>ref|NM_178332.1| Homo sapiens gonadotropin-releasing hormone 2 (GNRH2), transcript variant 2, mRNA Length = 399 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ccccgccccgccatcctccaa 310 ||||||||||||||||||||| Sbjct: 360 ccccgccccgccatcctccaa 380
>ref|NM_178331.1| Homo sapiens gonadotropin-releasing hormone 2 (GNRH2), transcript variant 3, mRNA Length = 402 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ccccgccccgccatcctccaa 310 ||||||||||||||||||||| Sbjct: 363 ccccgccccgccatcctccaa 383
>ref|NM_001501.1| Homo sapiens gonadotropin-releasing hormone 2 (GNRH2), transcript variant 1, mRNA Length = 423 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ccccgccccgccatcctccaa 310 ||||||||||||||||||||| Sbjct: 384 ccccgccccgccatcctccaa 404
>gb|BC069362.1| Homo sapiens gonadotropin-releasing hormone 2, transcript variant 1, mRNA (cDNA clone MGC:97397 IMAGE:7262673), complete cds Length = 422 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ccccgccccgccatcctccaa 310 ||||||||||||||||||||| Sbjct: 383 ccccgccccgccatcctccaa 403
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 gcgagatcgcgcgcctgccgg 126 ||||||||||||||||||||| Sbjct: 1141983 gcgagatcgcgcgcctgccgg 1142003
>emb|AL121905.23|HSDJ534B8 Human DNA sequence from clone RP4-534B8 on chromosome 20 Contains the 3' end of the PTPRA gene for protein tyrosine phosphatase receptor type A, the GNRH2 gene for gonadotropin-releasing hormone 2, a novel gene and two CpG islands, complete sequence Length = 126679 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ccccgccccgccatcctccaa 310 ||||||||||||||||||||| Sbjct: 123127 ccccgccccgccatcctccaa 123147
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 cgagatcgcgcgcctgccgga 127 ||||||||||||||||||||| Sbjct: 138967 cgagatcgcgcgcctgccgga 138947
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 gccggaggagctcgtctcggcggcg 146 |||| |||||||||||||||||||| Sbjct: 4257751 gccgcaggagctcgtctcggcggcg 4257727
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/36 (91%), Gaps = 2/36 (5%) Strand = Plus / Plus Query: 261 ccgccgctcgccgacggggaggtcgccgtccccgcc 296 ||||||||||||||||| |||| |||||||||||| Sbjct: 3869475 ccgccgctcgccgacggcgagg--gccgtccccgcc 3869508
>emb|AJ335813.1|HSA335813 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XH8C Length = 616 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 ccccgccccgccatcctccaa 310 ||||||||||||||||||||| Sbjct: 346 ccccgccccgccatcctccaa 326
>gb|AF036329.1|AF036329 Homo sapiens gonadotropin-releasing hormone precursor, second form (GnRH-II) gene, complete cds Length = 4498 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ccccgccccgccatcctccaa 310 ||||||||||||||||||||| Sbjct: 3392 ccccgccccgccatcctccaa 3412
>ref|XM_466908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5781 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gctcgtctcggcggcgctgg 150 |||||||||||||||||||| Sbjct: 200 gctcgtctcggcggcgctgg 219
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 ccggaggagctcgtctcggcggcg 146 |||||||| ||||||||||||||| Sbjct: 30869 ccggaggacctcgtctcggcggcg 30846
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgcgcgatgcctgccgggccgccg 186 |||||||||||||||| ||||||| Sbjct: 1090882 cgcgcgatgcctgccgcgccgccg 1090905
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctcgccgacgggga 280 |||||||||||||||||||| Sbjct: 38396 ccgccgctcgccgacgggga 38415
>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06, complete sequence Length = 160907 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gctcgtctcggcggcgctgg 150 |||||||||||||||||||| Sbjct: 73167 gctcgtctcggcggcgctgg 73186
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 agaaggagctcttcctccgc 329 |||||||||||||||||||| Sbjct: 2533533 agaaggagctcttcctccgc 2533552
>ref|XM_652748.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0236.2), mRNA Length = 3150 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 cctgccccccggcggcctcccgcc 265 |||||||||||||||| ||||||| Sbjct: 2067 cctgccccccggcggcttcccgcc 2090
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 ccggcggcctcccgccgctcgccg 273 ||||||| |||||||||||||||| Sbjct: 84909 ccggcggactcccgccgctcgccg 84886
>ref|XM_863066.1| PREDICTED: Canis familiaris hypothetical protein LOC611317 (LOC611317), mRNA Length = 1035 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ctgggcccgcttcctgcccc 249 |||||||||||||||||||| Sbjct: 240 ctgggcccgcttcctgcccc 221
>gb|AC152405.15| Medicago truncatula clone mth2-49f2, complete sequence Length = 126818 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ccaatctcgccctctccacc 62 |||||||||||||||||||| Sbjct: 103956 ccaatctcgccctctccacc 103937
>emb|AL591845.27| Human DNA sequence from clone RP11-268J15 on chromosome 1 Contains the 3' end of a novel gene for thyroid hormone receptor-associated protein, 150 kDa subunit (TRAP150) (FLJ22082), a novel transcript (FLJ22938), a gene for a novel protein (FLJ10647), the 3' end of a gene for Ser/Thr-like kinase (MGC4796) and two CpG islands, complete sequence Length = 104307 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 cgcctctccgccggccccgccctc 350 ||||||||| |||||||||||||| Sbjct: 62970 cgcctctccaccggccccgccctc 62947
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 tccgcctctccgccggccccgccc 348 |||||||||| ||||||||||||| Sbjct: 2034360 tccgcctctcagccggccccgccc 2034383
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ctcccgccgctcgccgacgg 277 |||||||||||||||||||| Sbjct: 268474 ctcccgccgctcgccgacgg 268493
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 gcctgccgggccgccgcggtgtcc 194 ||||||||||||||||||| |||| Sbjct: 162630 gcctgccgggccgccgcggcgtcc 162653
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ccgcggtgtccccggccttc 203 |||||||||||||||||||| Sbjct: 107750 ccgcggtgtccccggccttc 107731
>emb|AL596183.11| Mouse DNA sequence from clone RP23-286B12 on chromosome 11, complete sequence Length = 167058 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ctctccaccccaacccccga 73 |||||||||||||||||||| Sbjct: 156471 ctctccaccccaacccccga 156452
>gb|AE012489.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 397 of 460 of the complete genome Length = 10504 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgc 123 |||||||||||||||||||| Sbjct: 2357 ctgcgagatcgcgcgcctgc 2376
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 tccaccccaacccccgaccc 76 |||||||||||||||||||| Sbjct: 3274932 tccaccccaacccccgaccc 3274951 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cacgccgcagtactggacct 465 |||||||||||||||||||| Sbjct: 293665 cacgccgcagtactggacct 293684
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ctgcgagatcgcgcgcctgc 123 |||||||||||||||||||| Sbjct: 4440845 ctgcgagatcgcgcgcctgc 4440864
>tpg|BK000392.1| TPA: TPA_exp: Homo sapiens equilibrative nucleoside transporter 3 (ENT3) gene, complete cds Length = 45759 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ccccgccctcctccaggaca 360 |||||||||||||||||||| Sbjct: 30956 ccccgccctcctccaggaca 30975
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctcgccgacgggga 280 |||||||||||||||||||| Sbjct: 3670724 ccgccgctcgccgacgggga 3670743
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gctcgtctcggcggcgctgg 150 |||||||||||||||||||| Sbjct: 28140492 gctcgtctcggcggcgctgg 28140511
>gb|AC105328.13| Homo sapiens chromosome 8, clone RP11-932B15, complete sequence Length = 128785 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tctccaccccaacccccgac 74 |||||||||||||||||||| Sbjct: 81034 tctccaccccaacccccgac 81015
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gccccgccctcctccaggac 359 |||||||||||||||||||| Sbjct: 889704 gccccgccctcctccaggac 889723
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 247 cccccggcggcctcccgccgctcgccgacggg 278 |||||||| ||||||||||||| |||| |||| Sbjct: 105736 cccccggccgcctcccgccgctggccggcggg 105705
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 agctcttcctccgcctctccgccg 339 ||||| |||||||||||||||||| Sbjct: 16768 agctcctcctccgcctctccgccg 16745
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 agctcttcctccgcctctccgccg 339 ||||| |||||||||||||||||| Sbjct: 66279 agctcctcctccgcctctccgccg 66256
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gctcgtctcggcggcgctgg 150 |||||||||||||||||||| Sbjct: 66768 gctcgtctcggcggcgctgg 66749
>dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109C03, full insert sequence Length = 1277 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 247 cccccggcggcctcccgccgctcgccgacggg 278 |||||||| ||||||||||||| |||| |||| Sbjct: 406 cccccggccgcctcccgccgctggccggcggg 375
>dbj|AK120559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131N16, full insert sequence Length = 5783 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gctcgtctcggcggcgctgg 150 |||||||||||||||||||| Sbjct: 200 gctcgtctcggcggcgctgg 219
>dbj|AK069714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030K16, full insert sequence Length = 1121 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gctcgtctcggcggcgctgg 150 |||||||||||||||||||| Sbjct: 218 gctcgtctcggcggcgctgg 237
>dbj|AK069416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016D11, full insert sequence Length = 939 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gctcgtctcggcggcgctgg 150 |||||||||||||||||||| Sbjct: 168 gctcgtctcggcggcgctgg 187
>gb|AF088826.1|AF088826 Ophiopholis aculeata 28S large subunit ribosomal RNA gene, partial sequence Length = 301 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gctcttcctccgcctctccg 336 |||||||||||||||||||| Sbjct: 173 gctcttcctccgcctctccg 154
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 aggagctcttcctccgcctc 332 |||||||||||||||||||| Sbjct: 274 aggagctcttcctccgcctc 293
>dbj|AP001754.1| Homo sapiens genomic DNA, chromosome 21q, section 98/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gtcgccgtccccgccccgcc 301 |||||||||||||||||||| Sbjct: 15676 gtcgccgtccccgccccgcc 15657
>gb|AF029837.1|AF029837 Homo sapiens alpha 7 neuronal nicotinic receptor gene, promoter region Length = 392 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 ccgtccccgccccgccatcc 305 |||||||||||||||||||| Sbjct: 212 ccgtccccgccccgccatcc 193
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gagctcttcctccgcctctc 334 |||||||||||||||||||| Sbjct: 1936228 gagctcttcctccgcctctc 1936247
>dbj|AP003473.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1935H12 Length = 148498 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tctccaccccaacccccgac 74 |||||||||||||||||||| Sbjct: 75524 tctccaccccaacccccgac 75543
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccgccgctcgccgacgggga 280 |||||||||||||||||||| Sbjct: 3679418 ccgccgctcgccgacgggga 3679437
>emb|AL359183.16| Human DNA sequence from clone RP11-327E2 on chromosome 10 Contains the 3' end of the gene for equilibrative nucleoside transporter 3 (ENT3), the 5' end of the CDH23 gene for cadherin related 23, a novel gene and one CpG island, complete sequence Length = 180745 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ccccgccctcctccaggaca 360 |||||||||||||||||||| Sbjct: 13335 ccccgccctcctccaggaca 13354
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gccccgccctcctccaggac 359 |||||||||||||||||||| Sbjct: 558123 gccccgccctcctccaggac 558142
>dbj|AP005356.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1198A4, complete sequence Length = 159758 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tctccaccccaacccccgac 74 |||||||||||||||||||| Sbjct: 26195 tctccaccccaacccccgac 26214
>emb|X80853.1|HSLTPFK H.sapiens gene for liver type phosphofructokinase Length = 2586 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gtcgccgtccccgccccgcc 301 |||||||||||||||||||| Sbjct: 2533 gtcgccgtccccgccccgcc 2514
>dbj|AP001060.1| Homo sapiens genomic DNA, chromosome 21, clone:D4G11, MX1-D21S171 region, complete sequence Length = 42133 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gtcgccgtccccgccccgcc 301 |||||||||||||||||||| Sbjct: 40172 gtcgccgtccccgccccgcc 40153
>dbj|AB006684.1| Homo sapiens APECED gene for AIRE-1, AIRE-2, AIRE-3, complete cds Length = 20000 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gtcgccgtccccgccccgcc 301 |||||||||||||||||||| Sbjct: 18754 gtcgccgtccccgccccgcc 18735 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,046,569 Number of Sequences: 3902068 Number of extensions: 3046569 Number of successful extensions: 76889 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 74691 Number of HSP's gapped (non-prelim): 2181 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
