ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart42g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1NCL1_YEAST (P38205) Putative methyltransferase NCL1 (EC 2.1.1.-) 137 3e-32
2YLH4_SCHPO (Q9HGQ2) Hypothetical protein C17D4.04 in chromosome I 129 5e-30
3YEBU_ECOLI (P76273) Hypothetical protein yebU 69 1e-11
4RSMB_BACSU (P94464) Ribosomal RNA small subunit methyltransferas... 68 1e-11
5RSMB_COXBU (P45679) Ribosomal RNA small subunit methyltransferas... 59 7e-09
6RSMB_VIBPA (Q87KD3) Ribosomal RNA small subunit methyltransferas... 59 9e-09
7RSMB_SYNY3 (P72943) Ribosomal RNA small subunit methyltransferas... 58 2e-08
8RSMB_PSESM (Q88B41) Ribosomal RNA small subunit methyltransferas... 57 3e-08
9RSMB_VIBVY (Q7MGK4) Ribosomal RNA small subunit methyltransferas... 56 6e-08
10RSMB_VIBVU (Q8DDE5) Ribosomal RNA small subunit methyltransferas... 56 6e-08
11RSMB_PSEPK (Q88RR3) Ribosomal RNA small subunit methyltransferas... 56 7e-08
12Y1407_MYCTU (P71675) Hypothetical protein Rv1407/MT1451 56 7e-08
13RSMB_VIBCH (Q9KVU5) Ribosomal RNA small subunit methyltransferas... 55 2e-07
14RSMB_SHIFL (Q7UBD3) Ribosomal RNA small subunit methyltransferas... 55 2e-07
15RSMB_SALTY (Q8ZLM5) Ribosomal RNA small subunit methyltransferas... 55 2e-07
16RSMB_SALTI (Q8Z1X1) Ribosomal RNA small subunit methyltransferas... 55 2e-07
17RSMB_ECOLI (P36929) Ribosomal RNA small subunit methyltransferas... 54 2e-07
18RSMB_ECOL6 (Q8FD12) Ribosomal RNA small subunit methyltransferas... 54 2e-07
19RSMB_ECO57 (Q8XEE5) Ribosomal RNA small subunit methyltransferas... 54 4e-07
20RSMB_SHEON (Q8EKR0) Ribosomal RNA small subunit methyltransferas... 53 5e-07
21RSMB_YERPE (Q8ZJ81) Ribosomal RNA small subunit methyltransferas... 53 5e-07
22RSMB_HAEDU (Q7VKC4) Ribosomal RNA small subunit methyltransferas... 51 2e-06
23RSMB_PHOLL (Q7MYI0) Ribosomal RNA small subunit methyltransferas... 51 2e-06
24NOL1_HUMAN (P46087) Proliferating-cell nucleolar antigen p120 (P... 50 4e-06
25RSMB_XANAC (Q8PG22) Ribosomal RNA small subunit methyltransferas... 50 5e-06
26RSMB_PSEAE (Q9I7A9) Ribosomal RNA small subunit methyltransferas... 49 7e-06
27RSMB_XANCP (Q8P4G1) Ribosomal RNA small subunit methyltransferas... 49 9e-06
28Y026_METJA (Q60343) Hypothetical protein MJ0026 49 1e-05
29RSMB_PASMU (Q9CKP7) Ribosomal RNA small subunit methyltransferas... 49 1e-05
30NOP2_YEAST (P40991) Nucleolar protein NOP2 47 5e-05
31RSMB_HAEIN (P44788) Ribosomal RNA small subunit methyltransferas... 45 1e-04
32RSMB_XYLFT (Q87AR1) Ribosomal RNA small subunit methyltransferas... 42 0.001
33RSMB_XYLFA (Q9PEV0) Ribosomal RNA small subunit methyltransferas... 41 0.002
34UPP_LEIXX (Q6AHB4) Uracil phosphoribosyltransferase (EC 2.4.2.9)... 31 2.0
35POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein V... 30 3.3
36RS7_ERWCT (Q6CZW4) 30S ribosomal protein S7 30 4.4
37RS7_ECOLI (P02359) 30S ribosomal protein S7 30 5.7
38COBD_THEAC (Q9HLZ7) Probable cobalamin biosynthesis protein cobD 30 5.7
39RS7_SHISS (Q3YWT1) 30S ribosomal protein S7 30 5.7
40RS7_SHIFL (P66608) 30S ribosomal protein S7 30 5.7
41RS7_SHIDS (Q32B25) 30S ribosomal protein S7 30 5.7
42RS7_SHIBS (Q31VU8) 30S ribosomal protein S7 30 5.7
43RS7_PHOLL (Q7N9B3) 30S ribosomal protein S7 30 5.7
44RS7_ECOL6 (P66606) 30S ribosomal protein S7 30 5.7
45RS7_ECO57 (P66607) 30S ribosomal protein S7 30 5.7
46POLG_CXA24 (P36290) Genome polyprotein [Contains: Coat protein V... 30 5.7
47TSC10_NEUCR (Q7RZR2) 3-ketodihydrosphingosine reductase tsc-10 (... 30 5.7
48DGKE_MOUSE (Q9R1C6) Diacylglycerol kinase epsilon (EC 2.7.1.107)... 30 5.7
49RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-) 29 7.5
50FLNB_MOUSE (Q80X90) Filamin-B (FLN-B) (Beta-filamin) (Actin-bind... 29 7.5
51FLNB_HUMAN (O75369) Filamin-B (FLN-B) (Beta-filamin) (Actin-bind... 29 7.5
52RS7_BUCAP (P59059) 30S ribosomal protein S7 29 7.5
53VG10_BPT4 (P10928) Baseplate structural protein Gp10 (Baseplate ... 29 7.5
54HUNB_DROSL (O46256) Protein hunchback (Fragments) 29 9.7
55HUNB_DROAA (O46234) Protein hunchback (Fragments) 29 9.7
56FLNA_HUMAN (P21333) Filamin-A (Alpha-filamin) (Filamin-1) (Endot... 29 9.7
57HUNB_DROTA (O46260) Protein hunchback (Fragments) 29 9.7
58HUNB_DRODA (O46262) Protein hunchback (Fragments) 29 9.7
59HUNB_DROAD (O46232) Protein hunchback (Fragments) 29 9.7
60RS7_SALTY (P0A2B3) 30S ribosomal protein S7 29 9.7
61RS7_SALTI (P0A2B4) 30S ribosomal protein S7 29 9.7
62HUNB_DROIK (O46242) Protein hunchback (Fragments) 29 9.7
63RS7_SALPA (Q5PIW2) 30S ribosomal protein S7 29 9.7
64RS7_SALCH (Q57J25) 30S ribosomal protein S7 29 9.7
65HUNB_DROLI (O46244) Protein hunchback (Fragments) 29 9.7
66S19A1_HUMAN (P41440) Folate transporter 1 (Solute carrier family... 29 9.7
67FLNC_MOUSE (Q8VHX6) Filamin-C (Gamma-filamin) (Filamin-2) (FLN-C... 29 9.7
68VG60_ICHV1 (Q00125) Hypothetical gene 60 protein 29 9.7 
>NCL1_YEAST (P38205) Putative methyltransferase NCL1 (EC 2.1.1.-)|
          Length = 684

 Score =  137 bits (344), Expect = 3e-32
 Identities = 63/108 (58%), Positives = 79/108 (73%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FDRILCDVPCSGDGT+RK   +W+ WN   G GLH +Q+ I  RG+ LLK  GR+VYSTC
Sbjct: 251 FDRILCDVPCSGDGTMRKNVNVWKDWNTQAGLGLHAVQLNILNRGLHLLKNNGRLVYSTC 310

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDVSNELPELIRRPGLRTWKVRDR 324
           S+NP+ENEAVV E LR+ GD + L++  ++LP LIR  G+  W V DR
Sbjct: 311 SLNPIENEAVVAEALRKWGDKIRLVNCDDKLPGLIRSKGVSKWPVYDR 358
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>YLH4_SCHPO (Q9HGQ2) Hypothetical protein C17D4.04 in chromosome I|
          Length = 654

 Score =  129 bits (324), Expect = 5e-30
 Identities = 61/107 (57%), Positives = 76/107 (71%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FDRIL DVPCSGDGT RK   +W  W++    GLH  Q++I MRG+ LL+ GGR+VYSTC
Sbjct: 234 FDRILADVPCSGDGTFRKNIALWNEWSLKTALGLHATQIKILMRGLQLLEKGGRLVYSTC 293

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDVSNELPELIRRPGLRTWKVRD 321
           S+NP+ENEAVV  +L     SV L+DVS+ELP+L R  G+  W V D
Sbjct: 294 SLNPIENEAVVSAVLNATRGSVRLVDVSSELPQLKRSQGVDNWVVCD 340
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>YEBU_ECOLI (P76273) Hypothetical protein yebU|
          Length = 479

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 36/92 (39%), Positives = 49/92 (53%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FD IL D PCSG+G VRK P   + W+      +   Q E+       L+ GG +VYSTC
Sbjct: 188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDVSNELP 276
           ++N  ENEAV   +     D+VE L + +  P
Sbjct: 248 TLNQEENEAVCLWLKETYPDAVEFLPLGDLFP 279
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>RSMB_BACSU (P94464) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase)
          Length = 447

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 40/114 (35%), Positives = 60/114 (52%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FDRIL D PCSG G +R+ P M  T        L  +Q+ I      L+K GG +VYSTC
Sbjct: 323 FDRILVDAPCSGFGVIRRKPDMKYTKKPDDSARLAEIQLSILREIAPLVKKGGTLVYSTC 382

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDVSNELPELIRRPGLRTWKVRDRASWLGS 342
           +M+  EN+ V+   ++   D    L +   LPE + RP +R  +++    + G+
Sbjct: 383 TMDRTENDEVIHAFIQEHPDFEPDLSLEKRLPEKV-RPFVRDGRLQILPHYFGT 435
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>RSMB_COXBU (P45679) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase)
          Length = 430

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FDRIL D PCS  G +R+ P +      G  +  H+ ++++      +LK GG ++YSTC
Sbjct: 312 FDRILLDAPCSATGVIRRHPDIKLLRQPGDISQYHQKKLQLLNALWTVLKAGGFLLYSTC 371

Query: 181 SMNPVENEAVVGEILRRCGDSVEL 252
           S+ P ENE V+ E L    D VEL
Sbjct: 372 SVLPDENEKVIEEFL-STHDKVEL 394
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>RSMB_VIBPA (Q87KD3) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 427

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 40/99 (40%), Positives = 48/99 (48%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FDRIL D PCS  G +R+ P +           L  LQ EI       LK GG MVY+TC
Sbjct: 313 FDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQSEIFDAMWTQLKPGGTMVYATC 372

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDVSNELPELIRRPG 297
           S+ P EN   V   L R  D+ +LLD   + P     PG
Sbjct: 373 SITPQENVEQVKAFLARTADA-QLLDSDPDQPGRQILPG 410
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>RSMB_SYNY3 (P72943) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase)
          Length = 446

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +1

Query: 4   DRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           DR L DVPCSG GT+ + P + WR     +   L  LQ  +      L+K GG +VYSTC
Sbjct: 325 DRALLDVPCSGLGTLHRNPDLRWRQTPATIAT-LLPLQQALLKAIAPLVKSGGTLVYSTC 383

Query: 181 SMNPVENEAVVGEILR 228
           ++NP ENEA +   L+
Sbjct: 384 TLNPAENEAQIERFLQ 399
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>RSMB_PSESM (Q88B41) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 448

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 43/136 (31%), Positives = 64/136 (47%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           F RIL D PCS  G +R+ P +  T  +     L  LQ E+       L+VGG +VY+TC
Sbjct: 314 FQRILLDAPCSATGVIRRHPDIKLTRQLDDIAALATLQGELLDALWPTLQVGGMLVYATC 373

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDVSNELPELIRRPGLRTWKVRDRASWLGSHKDVLH 360
           S  P EN  V+   L R   + E LD++ +  +     G++    R   +  G H D  +
Sbjct: 374 STLPTENTDVIEAFLARTSGARE-LDIAGQAGQ--PPAGIKQPHGRQLLAQQGGH-DGFY 429

Query: 361 YRKNVILPSMFPSGKG 408
           Y K + + +    G G
Sbjct: 430 YAKLIKIAAQDRGGAG 445
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>RSMB_VIBVY (Q7MGK4) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 426

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 38/99 (38%), Positives = 49/99 (49%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FDRIL D PCS  G +R+ P +           L +LQ EI     A LK GG +VY+TC
Sbjct: 313 FDRILLDAPCSATGVIRRHPDIKWLRRAEDITALAQLQSEIFDAMWAQLKPGGTLVYATC 372

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDVSNELPELIRRPG 297
           S+ P+EN   V   L R   + +L+    E P     PG
Sbjct: 373 SITPMENVEQVKAFLART-PAAQLVGSERENPGRQILPG 410
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>RSMB_VIBVU (Q8DDE5) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 426

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 36/92 (39%), Positives = 47/92 (51%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FDRIL D PCS  G +R+ P +           L +LQ EI     A LK GG +VY+TC
Sbjct: 313 FDRILLDAPCSATGVIRRHPDIKWLRRAEDITALAQLQSEIFDAMWAQLKPGGTLVYATC 372

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDVSNELP 276
           S+ P+EN   V   L R   + +L+    E P
Sbjct: 373 SITPMENVEQVKAFLART-SAAQLVGSERENP 403
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>RSMB_PSEPK (Q88RR3) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 436

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 42/123 (34%), Positives = 55/123 (44%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           F RIL D PCS  G +R+ P +  T        L  LQ E+       L+VGG ++Y+TC
Sbjct: 314 FQRILLDAPCSATGVIRRHPDIKMTRQADDIPALATLQGELLDALWPTLEVGGMLLYATC 373

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDVSNELPELIRRPGLRTWKVRDRASWLGSHKDVLH 360
           S  P EN  V+   L R   + EL        +L    GLR    R   +  G H D  +
Sbjct: 374 STLPTENTEVIKAFLARTPGAREL--------DLATEAGLRQPHGRQLLAQEGGH-DGFY 424

Query: 361 YRK 369
           Y K
Sbjct: 425 YAK 427
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>Y1407_MYCTU (P71675) Hypothetical protein Rv1407/MT1451|
          Length = 457

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAP-GMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDR+L D PC+G G +R+ P   WR     +   L +LQ E+    IAL + GG ++Y+T
Sbjct: 335 FDRVLVDAPCTGLGALRRRPEARWRRQPADVA-ALAKLQRELLSAAIALTRPGGVVLYAT 393

Query: 178 CSMNPVENEAVVGEILRR 231
           CS +  E    V + LRR
Sbjct: 394 CSPHLAETVGAVADALRR 411
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>RSMB_VIBCH (Q9KVU5) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 434

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 33/81 (40%), Positives = 40/81 (49%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FDRIL D PCS  G +R+ P +           L  LQ EI       LK GG +VY+TC
Sbjct: 321 FDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQLKPGGSLVYATC 380

Query: 181 SMNPVENEAVVGEILRRCGDS 243
           S+ P EN   V   L R  D+
Sbjct: 381 SITPQENRLQVKAFLERTPDA 401
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>RSMB_SHIFL (Q7UBD3) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 429

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDRIL D PCS  G +R+ P + W   +  +   L +LQ EI       LK GG +VY+T
Sbjct: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE-LAQLQSEILDAIWPHLKSGGTLVYAT 374

Query: 178 CSMNPVENEAVVGEILRRCGDSVELLDVSNELPELIRRPG 297
           CS+ P EN   +   L+R  D+      + E P    +PG
Sbjct: 375 CSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNQPG 414
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>RSMB_SALTY (Q8ZLM5) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 429

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDRIL D PCS  G +R+ P + W   +  +   L +LQ EI       LK GG +VY+T
Sbjct: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIAE-LAQLQAEILDAVWPRLKPGGTLVYAT 374

Query: 178 CSMNPVENEAVVGEILRRCGDS 243
           CS+ P EN   +   L+R  D+
Sbjct: 375 CSVLPEENRDQIKTFLQRTPDA 396
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>RSMB_SALTI (Q8Z1X1) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 429

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDRIL D PCS  G +R+ P + W   +  +   L +LQ EI       LK GG +VY+T
Sbjct: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIAE-LAQLQAEILDAVWPRLKPGGTLVYAT 374

Query: 178 CSMNPVENEAVVGEILRRCGDS 243
           CS+ P EN   +   L+R  D+
Sbjct: 375 CSVLPEENRDQIKAFLQRTPDA 396
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>RSMB_ECOLI (P36929) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 429

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDRIL D PCS  G +R+ P + W   +  +   L +LQ EI       LK GG +VY+T
Sbjct: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE-LAQLQSEILDAIWPHLKTGGTLVYAT 374

Query: 178 CSMNPVENEAVVGEILRRCGDS 243
           CS+ P EN   +   L+R  D+
Sbjct: 375 CSVLPEENSLQIKAFLQRTADA 396
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>RSMB_ECOL6 (Q8FD12) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 429

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDRIL D PCS  G +R+ P + W   +  +   L +LQ EI     + LK GG +VY+T
Sbjct: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE-LAQLQSEILDAIWSHLKSGGTLVYAT 374

Query: 178 CSMNPVENEAVVGEILRRCGDS 243
           CS+ P EN   +   L+R  D+
Sbjct: 375 CSVLPEENSLQIKAFLQRTADA 396
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>RSMB_ECO57 (Q8XEE5) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 429

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDRIL D PCS  G +R+ P + W   +  +   L +LQ EI       LK GG +VY+T
Sbjct: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPE-LAQLQSEILDAIWPHLKSGGTLVYAT 374

Query: 178 CSMNPVENEAVVGEILRRCGDS 243
           CS+ P EN   +   L+R  D+
Sbjct: 375 CSVLPEENSLQIKAFLQRTADA 396
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>RSMB_SHEON (Q8EKR0) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 428

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDRIL D PCS  G +R+ P + W   N  +   L  LQ +I       LK GG ++Y+T
Sbjct: 310 FDRILLDAPCSATGVIRRHPDIKWLRKNHDIEE-LAELQRQILDHCWKWLKPGGTLLYAT 368

Query: 178 CSMNPVENEAVVGEILRRCGDS 243
           CS+ P EN   +   L R  D+
Sbjct: 369 CSILPQENRDQISAFLARTADA 390
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>RSMB_YERPE (Q8ZJ81) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 429

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDRIL D PCS  G +R+ P + W   +  +   L +LQ EI       LK GG +VY+T
Sbjct: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDISE-LAQLQSEIIEAIWPKLKHGGVLVYAT 374

Query: 178 CSMNPVENEAVVGEILRR 231
           CS+ P EN+  +   L+R
Sbjct: 375 CSILPEENQQQIAAFLQR 392
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>RSMB_HAEDU (Q7VKC4) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 435

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 31/87 (35%), Positives = 46/87 (52%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FDRIL D PCS  G +R+ P +      G  + L  LQ +I       LK  G +VY+TC
Sbjct: 318 FDRILLDAPCSATGVIRRHPDIKWLRQAGDISELVELQAKILSALWHRLKPNGTLVYATC 377

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDV 261
           S+ P EN   + + +    D+ EL+++
Sbjct: 378 SILPAENSEQIIQFITANPDA-ELIEM 403
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>RSMB_PHOLL (Q7MYI0) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 429

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDRIL D PCS  G +R+ P + W      +   L +LQ EI       LK  G +VY+T
Sbjct: 316 FDRILLDAPCSATGVIRRHPDIKWLRREEDIAQ-LVQLQSEILDAIWPYLKKSGTLVYAT 374

Query: 178 CSMNPVENEAVVGEILRRCGDS 243
           CS+ P EN   +   L+R  D+
Sbjct: 375 CSILPDENCQQISSFLKRHSDA 396
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>NOL1_HUMAN (P46087) Proliferating-cell nucleolar antigen p120|
           (Proliferation-associated nucleolar protein p120)
          Length = 855

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGI----ALLKVGGRMV 168
           FDR+L D PCSG G + K P +    +         LQ E+ +  I    A  K GG +V
Sbjct: 454 FDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLV 513

Query: 169 YSTCSMNPVENEAVVGEILRR 231
           Y TCS+   ENE VV   L++
Sbjct: 514 YCTCSITVEENEWVVDYALKK 534
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>RSMB_XANAC (Q8PG22) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 436

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 28/81 (34%), Positives = 41/81 (50%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FD +L D PCS  G VR+ P +           L  LQ  +       L+ GG+++Y+TC
Sbjct: 318 FDAVLLDAPCSATGVVRRQPDVLLHRRADDIEALCALQARLLDATWRTLRPGGQLLYTTC 377

Query: 181 SMNPVENEAVVGEILRRCGDS 243
           S+   EN+A V   L+R  D+
Sbjct: 378 SLLARENQAQVEAFLQRTPDA 398
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>RSMB_PSEAE (Q9I7A9) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 434

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 30/84 (35%), Positives = 41/84 (48%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           F RIL D PCS  G +R+ P +           L  LQ E+       L+VGG ++Y+TC
Sbjct: 314 FQRILLDAPCSATGVIRRHPDIKLARKPEDIAALAHLQGELLDALWPTLEVGGVLLYATC 373

Query: 181 SMNPVENEAVVGEILRRCGDSVEL 252
           S+ P EN   +   L R   + EL
Sbjct: 374 SVMPAENSDSIAAFLARTPGAREL 397
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>RSMB_XANCP (Q8P4G1) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 437

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 26/81 (32%), Positives = 41/81 (50%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FD +L D PCS  G VR+ P +         + L  LQ  +       L+ GG+++Y+TC
Sbjct: 319 FDAVLLDAPCSATGVVRRQPDVLLHRRADDIDALCALQARLLEACWRTLRPGGQLLYTTC 378

Query: 181 SMNPVENEAVVGEILRRCGDS 243
           S+   EN+  +   L+R  D+
Sbjct: 379 SLLKRENQTQIEAFLQRTADA 399
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>Y026_METJA (Q60343) Hypothetical protein MJ0026|
          Length = 274

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 35/90 (38%), Positives = 46/90 (51%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FD+IL D PCSG+    K     R  +          Q E+   GI LLK  G +VYSTC
Sbjct: 157 FDKILLDAPCSGNIIKDKN----RNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212

Query: 181 SMNPVENEAVVGEILRRCGDSVELLDVSNE 270
           SM   ENE V+  IL++  D   ++  +NE
Sbjct: 213 SMEVEENEEVIKYILQKRNDVELIIIKANE 242
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>RSMB_PASMU (Q9CKP7) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 446

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 27/75 (36%), Positives = 39/75 (52%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FDRIL D PCS  G +R+ P +         + L  LQ +I      +LK  G ++Y+TC
Sbjct: 328 FDRILLDAPCSATGVIRRHPDIKWLRQASDISALVALQKQILQALWTVLKPNGILLYATC 387

Query: 181 SMNPVENEAVVGEIL 225
           S+ P EN   + + L
Sbjct: 388 SVLPEENALQIEQFL 402
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>NOP2_YEAST (P40991) Nucleolar protein NOP2|
          Length = 618

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALL----KVGGRMV 168
           FDRIL D PCSG G + K   +  +        +  LQ ++ +  I  +    K GG +V
Sbjct: 415 FDRILLDAPCSGTGVIGKDQSVKVSRTEKDFIQIPHLQKQLLLSAIDSVDCNSKHGGVIV 474

Query: 169 YSTCSMNPVENEAVVGEILRRCGDSVELLD 258
           YSTCS+   E+EAV+   LR+   +V+L+D
Sbjct: 475 YSTCSVAVEEDEAVIDYALRK-RPNVKLVD 503
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>RSMB_HAEIN (P44788) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 451

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGM-WRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYST 177
           FDRIL D PCS  G +R+ P + W      +   L  LQ +I       LK  G ++Y+T
Sbjct: 333 FDRILLDAPCSATGVIRRHPDIKWLRKETDIAQ-LVELQKKILSALWEKLKPNGVLLYAT 391

Query: 178 CSMNPVENEAVVGEILRRCGDSVELLDV 261
           CS+ P EN   +   L    D+ ELL +
Sbjct: 392 CSVLPEENCEQIQAFLNAHADA-ELLSL 418
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>RSMB_XYLFT (Q87AR1) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 431

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FD +L D PCS  G VR+ P +           L  +Q  +       L+ GG +VY TC
Sbjct: 311 FDAVLLDAPCSATGVVRRQPDVLLHRRAEDLLPLLNIQSRLLDACWRTLRPGGVLVYVTC 370

Query: 181 SMNPVENEAVVGEILRRCGDS 243
           S+   EN+  +   L R  D+
Sbjct: 371 SVLRAENQTQLEAFLARTADA 391
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>RSMB_XYLFA (Q9PEV0) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 421

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +1

Query: 1   FDRILCDVPCSGDGTVRKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTC 180
           FD +L D PCS  G VR+ P +           L  +Q  +       L+ GG +VY TC
Sbjct: 303 FDAVLLDAPCSATGVVRRQPDVLLHRRAEDLLPLLNIQSRLLDACWRTLRPGGVLVYVTC 362

Query: 181 SMNPVENEAVVGEILRRCGDS 243
           S+   EN+  +   L R  D+
Sbjct: 363 SVLRAENQTQLEAFLARTVDA 383
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>UPP_LEIXX (Q6AHB4) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP|
           pyrophosphorylase) (UPRTase)
          Length = 210

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
 Frame = +1

Query: 136 IALLKVGGRMVYSTCSMNPVENEAVVGEILRRCGDSVELLDVSNELP-ELIRRPGLRTWK 312
           + +L+ G  M+    S+ P      +G  + R  ++ E    +  LP +L  R       
Sbjct: 74  VPILRAGLGMLEGMVSLMPTAEVGFLG--MARNEETFEPTTYAERLPMDLSERQCFVLDP 131

Query: 313 VRDRASWLGSHKDVLHYRKNVILPSMF----PSGKGSMDSCTAGGSVEVSIDAVDADMNE 480
           +      LG+  D L  R  V + ++     P G  +++  T G  V + + A+D  +NE
Sbjct: 132 MLATGGSLGAAIDFLFKRNAVDVTAICILAAPEGLAALEKATEGRDVTIVLGALDERLNE 191

Query: 481 SGDMVEG 501
           +G +V G
Sbjct: 192 NGYIVPG 198
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>POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2205

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 393 EHTWQYHILPVVKYIFMTAQPRRSIPYL 310
           ++TWQ    P + Y++  A PR SIPY+
Sbjct: 747 DYTWQSSSNPSIFYMYGNAPPRMSIPYV 774
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>RS7_ERWCT (Q6CZW4) 30S ribosomal protein S7|
          Length = 156

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 4/110 (3%)
 Frame = +1

Query: 49  RKAPGMWRTWNIGMGNGLHRLQVEIAMRGIALLKVGGRMVYSTCSMNPVENEAV----VG 216
           R   G    + + + N   R  VE+  R     +VGG        + PV   A+    + 
Sbjct: 53  RSGKGHLEAFEVALDNV--RPTVEVKSR-----RVGGSTYQVPVEVRPVRRNALAMRWIV 105

Query: 217 EILRRCGDSVELLDVSNELPELIRRPGLRTWKVRDRASWLGSHKDVLHYR 366
           E  R+ GD    L ++NEL +     G    K  D      ++K   HYR
Sbjct: 106 EAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYR 155
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>RS7_ECOLI (P02359) 30S ribosomal protein S7|
          Length = 178

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 78  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKR 137

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 138 EDVHRMAEANKAFAHYR 154
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>COBD_THEAC (Q9HLZ7) Probable cobalamin biosynthesis protein cobD|
          Length = 304

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = +1

Query: 322 RASW--LGSHKDVLHYRKNVILPSMFPSGKGSMDSCTAGGSVEVSIDAVDADMNESGDMV 495
           R SW  +G   DVL+YR  VI P  + S     DS  AG  +     A++  + + G  +
Sbjct: 205 RLSWFFIGFSADVLNYRHKVISPRKYVS---RFDSVNAGWPISTMACALNLRLEKRGSYI 261

Query: 496 EGKQETKIAIDD 531
              +  + ++ D
Sbjct: 262 VNDEGYQPSVRD 273
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>RS7_SHISS (Q3YWT1) 30S ribosomal protein S7|
          Length = 156

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 79  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKR 138

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 139 EDVHRMAEANKAFAHYR 155
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>RS7_SHIFL (P66608) 30S ribosomal protein S7|
          Length = 155

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 78  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKR 137

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 138 EDVHRMAEANKAFAHYR 154
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>RS7_SHIDS (Q32B25) 30S ribosomal protein S7|
          Length = 156

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 79  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKR 138

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 139 EDVHRMAEANKAFAHYR 155
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>RS7_SHIBS (Q31VU8) 30S ribosomal protein S7|
          Length = 156

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 79  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKR 138

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 139 EDVHRMAEANKAFAHYR 155
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>RS7_PHOLL (Q7N9B3) 30S ribosomal protein S7|
          Length = 156

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 79  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKR 138

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 139 EDVHRMAEANKAFAHYR 155
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>RS7_ECOL6 (P66606) 30S ribosomal protein S7|
          Length = 155

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 78  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKR 137

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 138 EDVHRMAEANKAFAHYR 154
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>RS7_ECO57 (P66607) 30S ribosomal protein S7|
          Length = 155

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 78  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKR 137

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 138 EDVHRMAEANKAFAHYR 154
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>POLG_CXA24 (P36290) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2213

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 393 EHTWQYHILPVVKYIFMTAQPRRSIPYL 310
           ++TWQ    P V Y + +A PR SIPY+
Sbjct: 753 DYTWQSSSNPSVFYTYGSAPPRISIPYV 780
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>TSC10_NEUCR (Q7RZR2) 3-ketodihydrosphingosine reductase tsc-10 (EC 1.1.1.102)|
           (3-dehydrosphinganine reductase) (KDS reductase)
          Length = 969

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = -3

Query: 277 QVAH*KHQGVQQNPHISAESHQQQLHFQQDSLSMLSRPSFRP 152
           Q  H  HQ  QQ  H   + HQQQ   Q D L  L +P   P
Sbjct: 656 QQQHQHHQQQQQQQHQQQQQHQQQQQ-QADMLQGLGQPQAHP 696
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>DGKE_MOUSE (Q9R1C6) Diacylglycerol kinase epsilon (EC 2.7.1.107) (Diglyceride|
           kinase epsilon) (DGK-epsilon) (DAG kinase epsilon)
          Length = 564

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 47  SVRLLVCGEHGILAWVMDFI 106
           SVR+LVCG  G + WV+D I
Sbjct: 268 SVRVLVCGGDGTVGWVLDAI 287
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>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)|
          Length = 1151

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
 Frame = +1

Query: 73  TWNIGMGNGLHRL------QVEIAMRGIALLKVGGRMVYSTCSMNPVENEAVVGEILRRC 234
           T++   GNG  R       + E+  R I   ++G  M++    + PV++EA   E L++ 
Sbjct: 290 TFSTQNGNGRERFGAIVETEQELEERNI---RMGLIMLFDKIKLRPVKDEAKFLEKLKQD 346

Query: 235 GDSVELLDVSNE 270
           GD  E++D+ ++
Sbjct: 347 GDDNEIVDLEDD 358
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>FLNB_MOUSE (Q80X90) Filamin-B (FLN-B) (Beta-filamin) (Actin-binding-like|
            protein) (ABP-280-like protein)
          Length = 2602

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 15/85 (17%)
 Frame = +1

Query: 334  LGSHKDVLHYRKNVILPSMF-----PSGKGSMDSCTAGGS----------VEVSIDAVDA 468
            +G H   + YR   +  S F     P G+G      AGG            E SI   +A
Sbjct: 2162 MGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGAHKVRAGGPGLERGEAGIPAEFSIWTREA 2221

Query: 469  DMNESGDMVEGKQETKIAIDDSKNG 543
                    VEG  + +I  DD KNG
Sbjct: 2222 GAGGLSIAVEGPSKAEITFDDHKNG 2246
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>FLNB_HUMAN (O75369) Filamin-B (FLN-B) (Beta-filamin) (Actin-binding-like|
            protein) (Thyroid autoantigen) (Truncated actin-binding
            protein) (Truncated ABP) (ABP-280 homolog) (ABP-278)
            (Filamin 3) (Filamin homolog 1) (Fh1)
          Length = 2602

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 15/85 (17%)
 Frame = +1

Query: 334  LGSHKDVLHYRKNVILPSMF-----PSGKGSMDSCTAGGS----------VEVSIDAVDA 468
            +G H   + YR   +  S F     P G+G      AGG            E SI   +A
Sbjct: 2162 MGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGAHKVRAGGPGLERGEAGVPAEFSIWTREA 2221

Query: 469  DMNESGDMVEGKQETKIAIDDSKNG 543
                    VEG  + +I  DD KNG
Sbjct: 2222 GAGGLSIAVEGPSKAEITFDDHKNG 2246
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>RS7_BUCAP (P59059) 30S ribosomal protein S7|
          Length = 156

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + +  R+ GD    L +SNEL + +   G    K 
Sbjct: 79  RVGGSTYQVPVEVRPVRRNALAMRWIVDSARKRGDKSMALRLSNELYDAVENKGTSVKKK 138

Query: 316 RDRASWLGSHKDVLHYR 366
            +      ++K   HYR
Sbjct: 139 EEVHKMAEANKAFAHYR 155
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>VG10_BPT4 (P10928) Baseplate structural protein Gp10 (Baseplate wedge protein|
           10)
          Length = 602

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 16/104 (15%)
 Frame = +1

Query: 34  GDGTVRKAPGMWRTWNIGMGNGL-------HRLQVEIAMRGIALLK---------VGGRM 165
           GDG V  + G W+T+N   G  L       + +        I L K         +  R 
Sbjct: 38  GDGDVPYSAGAWKTYNASSGQTLTAEWGKSYAINTSSGRVTINLPKGTVNDYNKVIRARD 97

Query: 166 VYSTCSMNPVENEAVVGEILRRCGDSVELLDVSNELPELIRRPG 297
           V++T ++NPV   A  G+ ++     VE+    ++L  +   PG
Sbjct: 98  VFATWNVNPVTLVAASGDTIKGSAVPVEINVRFSDLELVYCAPG 141
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>HUNB_DROSL (O46256) Protein hunchback (Fragments)|
          Length = 196

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 61 QEPYGQFHHHYRAHHTVY 8
          QEP    HHH+ AHH+ +
Sbjct: 12 QEPISHHHHHHHAHHSYH 29
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>HUNB_DROAA (O46234) Protein hunchback (Fragments)|
          Length = 196

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 79 SMFSTY--QEPYGQFHHHYRAHHT 14
          SMF+    QEP    HHH+ AHH+
Sbjct: 4  SMFAANIKQEPISHHHHHHHAHHS 27
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>FLNA_HUMAN (P21333) Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial|
           actin-binding protein) (Actin-binding protein 280)
           (ABP-280) (Nonmuscle filamin)
          Length = 2646

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 412 MDSCTAGGSVEVSIDAVDADMNESGDMVEGKQETKIAIDDSKNG 543
           ++    G S +  ++A+  D+   G  VEG  + KI  DD  +G
Sbjct: 585 LEGGVVGKSADFVVEAIGDDVGTLGFSVEGPSQAKIECDDKGDG 628
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>HUNB_DROTA (O46260) Protein hunchback (Fragments)|
          Length = 192

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 79 SMFSTY--QEPYGQFHHHYRAHHT 14
          SMF+    QEP    HHH+ AHH+
Sbjct: 4  SMFAANIKQEPISHHHHHHHAHHS 27
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>HUNB_DRODA (O46262) Protein hunchback (Fragments)|
          Length = 195

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 79 SMFSTY--QEPYGQFHHHYRAHHT 14
          SMF+    QEP    HHH+ AHH+
Sbjct: 4  SMFAANIKQEPISHHHHHHHAHHS 27
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>HUNB_DROAD (O46232) Protein hunchback (Fragments)|
          Length = 192

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 79 SMFSTY--QEPYGQFHHHYRAHHT 14
          SMF+    QEP    HHH+ AHH+
Sbjct: 4  SMFAANIKQEPISHHHHHHHAHHS 27
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>RS7_SALTY (P0A2B3) 30S ribosomal protein S7|
          Length = 155

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 78  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAADNKGTAVKKR 137

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 138 EDVHRMAEANKAFAHYR 154
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>RS7_SALTI (P0A2B4) 30S ribosomal protein S7|
          Length = 155

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 78  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAADNKGTAVKKR 137

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 138 EDVHRMAEANKAFAHYR 154
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>HUNB_DROIK (O46242) Protein hunchback (Fragments)|
          Length = 193

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 79 SMFSTY--QEPYGQFHHHYRAHHT 14
          SMF+    QEP    HHH+ AHH+
Sbjct: 4  SMFAANIKQEPISHHHHHHHAHHS 27
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>RS7_SALPA (Q5PIW2) 30S ribosomal protein S7|
          Length = 156

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 79  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAADNKGTAVKKR 138

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 139 EDVHRMAEANKAFAHYR 155
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>RS7_SALCH (Q57J25) 30S ribosomal protein S7|
          Length = 156

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 148 KVGGRMVYSTCSMNPVENEAV----VGEILRRCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +VGG        + PV   A+    + E  R+ GD    L ++NEL +     G    K 
Sbjct: 79  RVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAADNKGTAVKKR 138

Query: 316 RDRASWLGSHKDVLHYR 366
            D      ++K   HYR
Sbjct: 139 EDVHRMAEANKAFAHYR 155
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>HUNB_DROLI (O46244) Protein hunchback (Fragments)|
          Length = 198

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 79 SMFSTY--QEPYGQFHHHYRAHHT 14
          SMF+    QEP    HHH+ AHH+
Sbjct: 4  SMFAANIKQEPISHHHHHHHAHHS 27
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>S19A1_HUMAN (P41440) Folate transporter 1 (Solute carrier family 19 member 1)|
           (Placental folate transporter) (FOLT) (Reduced folate
           carrier protein) (RFC) (Intestinal folate carrier)
           (IFC-1)
          Length = 591

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 211 VGEILR-RCGDSVELLDVSNELPELIRRPGLRTWKV 315
           +G  LR  CGDSV L  +  EL + +RRP LR W +
Sbjct: 238 LGHALRVACGDSV-LARMLRELGDSLRRPQLRLWSL 272
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>FLNC_MOUSE (Q8VHX6) Filamin-C (Gamma-filamin) (Filamin-2) (FLN-C)|
           (Actin-binding-like protein) (ABP-L) (ABP-280-like
           protein) (Fragment)
          Length = 1144

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 15/94 (15%)
 Frame = +1

Query: 307 WKVRDRASWLGSHKDVLHYRKNVILPSMF-----PSGKGSMDSCTAGGS----------V 441
           + VR     +G H   + YR   +  S F     P G+G      AGG+           
Sbjct: 693 YSVRFVPQEMGPHTVTVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLERGVAGVPA 752

Query: 442 EVSIDAVDADMNESGDMVEGKQETKIAIDDSKNG 543
           E SI   +A        VEG  + +IA +D K+G
Sbjct: 753 EFSIWTREAGAGGLSIAVEGPSKAEIAFEDRKDG 786
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>VG60_ICHV1 (Q00125) Hypothetical gene 60 protein|
          Length = 393

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 121 IAMRGIALLKVGGRMVYSTCSMNPVENEAVVGEILRRCGD 240
           +AM GI  L  G   V  +  + P+    +VGEI + CGD
Sbjct: 148 LAMDGIPPLAKGLCFVLKSRGITPIRGGLLVGEIPKACGD 187


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,597,080
Number of Sequences: 219361
Number of extensions: 1831184
Number of successful extensions: 5656
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 5274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5589
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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