ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart42g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor ... 112 2e-25
2PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor ... 112 2e-25
3PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC... 111 4e-25
4PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3... 82 2e-16
5PSB5_HUMAN (P28074) Proteasome subunit beta type 5 precursor (EC... 82 2e-16
6PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC... 82 4e-16
7PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4.... 77 1e-14
8PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC... 77 1e-14
9PSB5_SCHPO (P30655) Proteasome subunit beta type 5 precursor (EC... 75 3e-14
10PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3... 73 1e-13
11PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC... 72 4e-13
12PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC... 71 7e-13
13PSB8_CANFA (Q5W416) Proteasome subunit beta type 8 precursor (EC... 71 7e-13
14PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25... 47 1e-05
15PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25... 46 2e-05
16PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25... 45 4e-05
17PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25... 45 4e-05
18PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25... 44 7e-05
19PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25... 44 1e-04
20PSB6_RAT (P28073) Proteasome subunit beta type 6 precursor (EC 3... 42 4e-04
21PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25... 42 4e-04
22PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25... 42 4e-04
23PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor ... 41 8e-04
24PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor ... 41 8e-04
25PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC... 40 0.001
26PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 prec... 40 0.001
27PSB6_MOUSE (Q60692) Proteasome subunit beta type 6 precursor (EC... 40 0.001
28PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.... 38 0.005
29PSB9_SALSA (Q9DD33) Proteasome subunit beta type 9 precursor (EC... 37 0.012
30PSB9_ONCMY (Q9PT26) Proteasome subunit beta type 9 precursor (EC... 37 0.012
31PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC... 37 0.012
32PSB6_YEAST (P38624) Proteasome component PRE3 precursor (EC 3.4.... 37 0.012
33PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC... 37 0.012
34PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3... 37 0.015
35PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC... 37 0.015
36PSB9_MUSDU (O35521) Proteasome subunit beta type 9 precursor (EC... 37 0.015
37PSB9_RAT (P28077) Proteasome subunit beta type 9 precursor (EC 3... 36 0.020
38PSB9_ORYLA (Q8UW64) Proteasome subunit beta type 9 precursor (EC... 36 0.020
39PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (... 36 0.026
40PSB9_MUSSI (O35524) Proteasome subunit beta type 9 precursor (EC... 36 0.026
41PSB9_MUSPL (O35523) Proteasome subunit beta type 9 precursor (EC... 36 0.026
42PSB9_MUSMB (O35522) Proteasome subunit beta type 9 precursor (EC... 36 0.026
43PSB9_MOUSE (P28076) Proteasome subunit beta type 9 precursor (EC... 36 0.026
44PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC... 35 0.034
45PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (... 35 0.044
46PSB9_HUMAN (P28065) Proteasome subunit beta type 9 precursor (EC... 34 0.075
47PSB4_DROME (Q9VNA5) Probable proteasome subunit beta type 4 (EC ... 34 0.098
48PSB4_YEAST (P30657) Proteasome component PRE4 (EC 3.4.25.1) (Mac... 33 0.13
49PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC... 33 0.17
50PSB4_MOUSE (P99026) Proteasome subunit beta type 4 precursor (EC... 33 0.22
51PSB4_RAT (P34067) Proteasome subunit beta type 4 precursor (EC 3... 32 0.28
52HSLV_COXBU (Q83A95) ATP-dependent protease hslV (EC 3.4.25.-) 32 0.49
53PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 prec... 31 0.63
54PSB4_HUMAN (P28070) Proteasome subunit beta type 4 precursor (EC... 31 0.83
55PSB4_PIG (Q29384) Proteasome subunit beta type 4 precursor (EC 3... 31 0.83
56PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 30 1.1
57HSLV_WOLPM (P61479) ATP-dependent protease hslV (EC 3.4.25.-) 30 1.4
58HSLV_RICCN (Q92II7) ATP-dependent protease hslV (EC 3.4.25.-) 30 1.4
59NUOF_AQUAE (O66841) NADH-quinone oxidoreductase chain F (EC 1.6.... 29 2.4
60HSLV_RICTY (Q68X53) ATP-dependent protease hslV (EC 3.4.25.-) 29 3.2
61HSLV_PHOLL (Q7MYC2) ATP-dependent protease hslV (EC 3.4.25.-) 29 3.2
62HSLV_VIBCH (Q9KNQ6) ATP-dependent protease hslV (EC 3.4.25.-) 28 4.1
63HSLV_VIBPA (Q87T20) ATP-dependent protease hslV (EC 3.4.25.-) 28 4.1
64PSMA_AERPE (Q9YC01) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 28 4.1
65PSMA2_HALMA (Q5V1D4) Proteasome alpha subunit (EC 3.4.25.1) (Mul... 28 4.1
66HSLV_VIBVY (Q7MH57) ATP-dependent protease hslV (EC 3.4.25.-) 28 4.1
67HSLV_VIBVU (Q8DCP3) ATP-dependent protease hslV (EC 3.4.25.-) 28 4.1
68HSLV_RICPR (Q9ZDK9) ATP-dependent protease hslV (EC 3.4.25.-) 28 5.4
69PSMA_ARCFU (O29760) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 28 5.4
70PSMA_THEAC (P25156) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 28 7.0
71CBPA_CLOCL (P38058) Cellulose-binding protein A precursor 28 7.0
72SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calciu... 28 7.0
73HSLV_PHOPR (Q6LVI2) ATP-dependent protease hslV (EC 3.4.25.-) 28 7.0
74PSMA_THEVO (Q97BZ8) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 27 9.2
75PSMA_METJA (Q60177) Proteasome alpha subunit (EC 3.4.25.1) (Mult... 27 9.2
76VL2_HPV48 (Q80925) Minor capsid protein L2 27 9.2 
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)|
           (20S proteasome beta subunit E-2) (Proteasome epsilon-2
           chain)
          Length = 273

 Score =  112 bits (281), Expect = 2e-25
 Identities = 56/76 (73%), Positives = 63/76 (82%)
 Frame = +2

Query: 155 ALEFPTCDDFDGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKI 334
           + + P   DFDGFQK    MV   KGTTTL+FIF +GV+VAADSRASMGGYISSQ+V+KI
Sbjct: 32  SFDLPRTTDFDGFQKKAVEMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI 91

Query: 335 IEINPYMLGTMAGGAA 382
           IEINPYMLGTMAGGAA
Sbjct: 92  IEINPYMLGTMAGGAA 107
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>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)|
           (20S proteasome beta subunit E-1) (Proteasome epsilon-1
           chain) (Proteasome component E)
          Length = 274

 Score =  112 bits (280), Expect = 2e-25
 Identities = 55/76 (72%), Positives = 64/76 (84%)
 Frame = +2

Query: 155 ALEFPTCDDFDGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKI 334
           + + P   +FDGFQK  K M+ + KGTTTL+FIF  GV+VAADSRASMGGYISSQ+V+KI
Sbjct: 32  SFDLPRTKEFDGFQKKAKDMLKHAKGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKI 91

Query: 335 IEINPYMLGTMAGGAA 382
           IEINPYMLGTMAGGAA
Sbjct: 92  IEINPYMLGTMAGGAA 107
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>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)|
           (20S proteasome subunit E) (Proteasome epsilon chain)
          Length = 272

 Score =  111 bits (278), Expect = 4e-25
 Identities = 56/76 (73%), Positives = 62/76 (81%)
 Frame = +2

Query: 155 ALEFPTCDDFDGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKI 334
           + + P   DFDGFQK    MV   KGTTTL+FIF  GV+VAADSRASMGGYISSQ+V+KI
Sbjct: 30  SFDLPNPTDFDGFQKEAVQMVKPAKGTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKI 89

Query: 335 IEINPYMLGTMAGGAA 382
           IEINPYMLGTMAGGAA
Sbjct: 90  IEINPYMLGTMAGGAA 105
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>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)|
           (Proteasome epsilon chain) (Macropain epsilon chain)
           (Multicatalytic endopeptidase complex epsilon chain)
           (Proteasome subunit X) (Proteasome chain 6)
          Length = 208

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTTTL+F F  GVIVAADSRA+ G YI+SQTV+K+IEINPY+LGTMAGGAA
Sbjct: 4   GTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAA 54
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>PSB5_HUMAN (P28074) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)|
           (Proteasome epsilon chain) (Macropain epsilon chain)
           (Multicatalytic endopeptidase complex epsilon chain)
           (Proteasome subunit X) (Proteasome chain 6) (Proteasome
           subunit MB1)
          Length = 208

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTTTL+F F  GVIVAADSRA+ G YI+SQTV+K+IEINPY+LGTMAGGAA
Sbjct: 4   GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAA 54
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>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)|
           (Proteasome epsilon chain) (Macropain epsilon chain)
           (Multicatalytic endopeptidase complex epsilon chain)
           (Proteasome subunit X) (Proteasome chain 6)
          Length = 209

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTTTL+F F  GVIVAADSRA+ G YI+SQTV+K+IEINPY+LGTMAGGAA
Sbjct: 4   GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAA 54
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>PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4.25.1)|
           (Macropain subunit PRE2) (Proteinase YSCE subunit PRE2)
           (Multicatalytic endopeptidase complex subunit PRE2)
          Length = 287

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 35/51 (68%), Positives = 45/51 (88%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTTTL+F F  G+IVA DSRA+ G +++SQTV+K+IEINP++LGTMAGGAA
Sbjct: 75  GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAA 125
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>PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)|
           (Proteasome chain 1) (Macropain chain 1) (Multicatalytic
           endopeptidase complex chain 1) (Proteasome subunit C1)
           (Fragment)
          Length = 256

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 37/51 (72%), Positives = 44/51 (86%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTTTL+F F  GV+VA DSRA+ G YI+SQTV+K+IEINP +LGTMAGGAA
Sbjct: 55  GTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAA 105
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>PSB5_SCHPO (P30655) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)|
           (Proteasome component pts1) (Macropain subunit pts1)
           (Multicatalytic endopeptidase complex subunit pts1)
          Length = 272

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 35/62 (56%), Positives = 46/62 (74%)
 Frame = +2

Query: 197 KATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGG 376
           K    ++    GTTTL+F +  G++V  DSRAS G  I+SQTV+K+IEINPY+LGT+AGG
Sbjct: 50  KNKHCLIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGG 109

Query: 377 AA 382
           AA
Sbjct: 110 AA 111
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>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)|
           (Proteasome component C13) (Macropain subunit C13)
           (Multicatalytic endopeptidase complex subunit C13)
          Length = 276

 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = +2

Query: 188 GFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTM 367
           G  +  K  +    GTTTL+F F  GVIVA DSRAS G YI++  V K+IEINPY+LGTM
Sbjct: 58  GDDQERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTM 117

Query: 368 AGGAA 382
           +G AA
Sbjct: 118 SGCAA 122
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>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)|
           (Proteasome component C13) (Macropain subunit C13)
           (Multicatalytic endopeptidase complex subunit C13)
          Length = 276

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 36/65 (55%), Positives = 44/65 (67%)
 Frame = +2

Query: 188 GFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTM 367
           G  +     +    GTTTL+F F  GVIVA DSRA+ G YISS  + K+IEINPY+LGTM
Sbjct: 58  GGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTM 117

Query: 368 AGGAA 382
           +G AA
Sbjct: 118 SGCAA 122
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>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)|
           (Proteasome component C13) (Macropain subunit C13)
           (Multicatalytic endopeptidase complex subunit C13)
          Length = 276

 Score = 70.9 bits (172), Expect = 7e-13
 Identities = 35/51 (68%), Positives = 40/51 (78%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTTTL+F F  GVI A DSRAS G YIS+  V K+IEINPY+LGTM+G AA
Sbjct: 72  GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAA 122
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>PSB8_CANFA (Q5W416) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)|
           (Proteasome component C13) (Macropain subunit C13)
           (Multicatalytic endopeptidase complex subunit C13)
          Length = 276

 Score = 70.9 bits (172), Expect = 7e-13
 Identities = 39/66 (59%), Positives = 47/66 (71%)
 Frame = +2

Query: 185 DGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGT 364
           +G +   K MV+   GTTTL+F F  GVIVA DSRA+ G YISS  V K+IEINP +LGT
Sbjct: 60  NGEKNIRKEMVH---GTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGT 116

Query: 365 MAGGAA 382
           M+G AA
Sbjct: 117 MSGCAA 122
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>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 224

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/49 (42%), Positives = 33/49 (67%)
 Frame = +2

Query: 227 KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           KGTTT+  I D  VI+A D RAS+G  ++ +  +K+ +I+ Y+  T+AG
Sbjct: 5   KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAG 53
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>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 213

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
 Frame = +2

Query: 209 AMVNNK--KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           +M+  K  KGTTT+  +   GV++A + RA+MG +I+S+  +KI +I   M  T AG
Sbjct: 2   SMIEEKIYKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAG 58
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>PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 210

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 22/55 (40%), Positives = 32/55 (58%)
 Frame = +2

Query: 218 NNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           N  KGTTT+      GV+ A + RASMG  I+ +   KI +I+ ++  T+AG  A
Sbjct: 5   NTLKGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVA 59
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>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 210

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 22/56 (39%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
 Frame = +2

Query: 212 MVNNK--KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           M N+K  KGTTT+  +   G+++A++ RA+MG +I+S+T +K+ +I+  +  T AG
Sbjct: 1   MDNDKYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAG 56
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>PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 208

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 23/52 (44%), Positives = 34/52 (65%)
 Frame = +2

Query: 227 KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           KGTTT+    + GVI+AAD RAS G +++++ VRK++ I   +  T AG  A
Sbjct: 13  KGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVA 64
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>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 206

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 21/49 (42%), Positives = 34/49 (69%)
 Frame = +2

Query: 227 KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           KGTTT+  +  +GV++AAD+RAS+G  I ++ V KI +I+ ++    AG
Sbjct: 9   KGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAG 57
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>PSB6_RAT (P28073) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome delta chain) (Macropain delta chain)
           (Multicatalytic endopeptidase complex delta chain)
           (Proteasome subunit Y) (Proteasome chain 5)
          Length = 238

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT ++  FD GV++ ADSR + G YI+++   K+  I+ ++    +G AA
Sbjct: 33  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAA 83
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>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 207

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +2

Query: 227 KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           KGTTT+  +   GV++AAD RAS+G  I ++ V KI +I+ ++    AG
Sbjct: 9   KGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAG 57
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>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 207

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = +2

Query: 227 KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           KGTTT+  +   GV++AAD RAS+G  + ++ V KI +I+ ++    AG
Sbjct: 9   KGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAG 57
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>PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1)|
           (Proteasome subunit beta type 2) (20S proteasome beta
           subunit B-2) (Proteasome component FC)
          Length = 274

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +2

Query: 194 QKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           QK  KA    K GTT +  IF  GVI+ AD+RA+ G  ++ +   KI  + P +    AG
Sbjct: 27  QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAG 86

Query: 374 GAA 382
            AA
Sbjct: 87  TAA 89
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>PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1)|
           (Proteasome subunit beta type 2) (20S proteasome beta
           subunit B-1) (Proteasome component FA) (Proteasome
           component FB)
          Length = 273

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +2

Query: 194 QKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           QK  KA    K GTT +  IF  GVI+ AD+RA+ G  ++ +   KI  + P +    AG
Sbjct: 27  QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAG 86

Query: 374 GAA 382
            AA
Sbjct: 87  TAA 89
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>PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome delta chain) (Macropain delta chain)
           (Multicatalytic endopeptidase complex delta chain)
           (Proteasome subunit Y)
          Length = 239

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT ++  FD GV++ ADSR + G YI+++   K+  I+  +    +G AA
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAA 84
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>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC|
           3.4.25.1)
          Length = 226

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 19/53 (35%), Positives = 32/53 (60%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           + GTT  +  +  GVI+AADSR +MG YI+++   K+ ++   +    +G AA
Sbjct: 22  RMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAA 74
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>PSB6_MOUSE (Q60692) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome delta chain) (Macropain delta chain)
           (Multicatalytic endopeptidase complex delta chain)
           (Proteasome subunit Y)
          Length = 238

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 18/51 (35%), Positives = 32/51 (62%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT ++  F+ GV++ ADSR + G YI+++   K+  I+ ++    +G AA
Sbjct: 33  GTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAA 83
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>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)|
           (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1)
           (Multicatalytic endopeptidase complex subunit PUP1)
          Length = 261

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
 Frame = +2

Query: 182 FDGFQKATKAMVNN-------KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIE 340
           FD +Q+      N+         GTT +   F+ GV++AAD+R++ G  ++ +   K+  
Sbjct: 6   FDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHR 65

Query: 341 INPYMLGTMAGGAA 382
           I+P +    AG AA
Sbjct: 66  ISPKIWCAGAGTAA 79
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>PSB9_SALSA (Q9DD33) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Low molecular mass protein 2)
          Length = 217

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           K GTT ++  FD GV++ +DSR S G  + ++ + K+  ++  +   ++G AA
Sbjct: 16  KTGTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAA 68
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>PSB9_ONCMY (Q9PT26) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Low molecular mass protein 2)
          Length = 217

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           K GTT ++  FD GV++ +DSR S G  + ++ + K+  ++  +   ++G AA
Sbjct: 16  KTGTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAA 68
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>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome delta chain) (Tobacco cryptogein-induced
           protein 7) (tcI 7)
          Length = 234

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT +   ++ GV++ ADSR S G Y++++   KI ++   +    +G AA
Sbjct: 13  GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAA 63
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>PSB6_YEAST (P38624) Proteasome component PRE3 precursor (EC 3.4.25.1)|
           (Macropain subunit PRE3) (Proteinase YSCE subunit PRE3)
           (Multicatalytic endopeptidase complex subunit PRE3)
          Length = 215

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GT+ ++  F  GVI+ ADSR + G YI+++   K+  ++  +    +G AA
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAA 69
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>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome subunit beta type 1) (20S proteasome beta
           subunit A-1) (Proteasome component CD)
          Length = 233

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT +   ++ GV++ ADSR S G Y++++   KI ++   +    +G AA
Sbjct: 12  GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAA 62
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>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)|
           (Proteasome subunit Z) (Macropain chain Z)
           (Multicatalytic endopeptidase complex chain Z)
          Length = 277

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 21/66 (31%), Positives = 34/66 (51%)
 Frame = +2

Query: 185 DGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGT 364
           D  +K  K     K GTT    ++  G+++ AD+RA+ G  ++ +   KI  I+P +   
Sbjct: 28  DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCC 87

Query: 365 MAGGAA 382
            AG AA
Sbjct: 88  GAGTAA 93
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>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)|
           (Proteasome subunit Z) (Macropain chain Z)
           (Multicatalytic endopeptidase complex chain Z)
          Length = 277

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 21/66 (31%), Positives = 34/66 (51%)
 Frame = +2

Query: 185 DGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGT 364
           D  +K  K     K GTT    ++  G+++ AD+RA+ G  ++ +   KI  I+P +   
Sbjct: 28  DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCC 87

Query: 365 MAGGAA 382
            AG AA
Sbjct: 88  GAGTAA 93
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>PSB9_MUSDU (O35521) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT ++  FD GV+V +DSR S G  + ++   K+  ++  +   ++G AA
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAA 70
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>PSB9_RAT (P28077) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT ++  FD GV+V +DSR S G  + ++   K+  ++  +   ++G AA
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAA 70
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>PSB9_ORYLA (Q8UW64) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Low molecular mass protein 2)
          Length = 217

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 16/53 (30%), Positives = 32/53 (60%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           K GTT ++  F+ GV++ +DSR S G  + ++ + K+  ++  +   ++G AA
Sbjct: 16  KTGTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALSGSAA 68
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>PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)|
           (Proteasome MECl-1) (Macropain subunit MECl-1)
           (Multicatalytic endopeptidase complex subunit MECl-1)
          Length = 273

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           K GTT    +F  GVI+ AD+RA+    ++ ++  KI  I P +    AG AA
Sbjct: 37  KTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAA 89
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>PSB9_MUSSI (O35524) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT ++  FD GV+V +DSR S G  + ++   K+  ++  +   ++G AA
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAA 70
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>PSB9_MUSPL (O35523) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT ++  FD GV+V +DSR S G  + ++   K+  ++  +   ++G AA
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAA 70
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>PSB9_MUSMB (O35522) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT ++  FD GV+V +DSR S G  + ++   K+  ++  +   ++G AA
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAA 70
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>PSB9_MOUSE (P28076) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2) (LMP-2d)
          Length = 219

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT ++  FD GV+V +DSR S G  + ++   K+  ++  +   ++G AA
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAA 70
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>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)|
           (Proteasome subunit Z) (Macropain chain Z)
           (Multicatalytic endopeptidase complex chain Z)
          Length = 277

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           K GTT    ++  G+++ AD+RA+ G  ++ +   KI  I+P +    AG AA
Sbjct: 41  KTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAA 93
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>PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)|
           (Proteasome MECl-1) (Macropain subunit MECl-1)
           (Multicatalytic endopeptidase complex subunit MECl-1)
          Length = 273

 Score = 35.0 bits (79), Expect = 0.044
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           K GTT    +F  GVI+ AD+RA+    ++ ++  KI  I P +    AG AA
Sbjct: 37  KTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAA 89
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>PSB9_HUMAN (P28065) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT ++  FD GV++ +DSR S G  + ++   K+  ++  +   ++G AA
Sbjct: 20  GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAA 70
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>PSB4_DROME (Q9VNA5) Probable proteasome subunit beta type 4 (EC 3.4.25.1)|
          Length = 268

 Score = 33.9 bits (76), Expect = 0.098
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYML 358
           GT+ L   +D GV++AAD+  S G     Q + ++ ++N  +L
Sbjct: 57  GTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNIL 99
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>PSB4_YEAST (P30657) Proteasome component PRE4 (EC 3.4.25.1) (Macropain subunit|
           PRE4) (Proteinase YSCE subunit PRE4) (Multicatalytic
           endopeptidase complex subunit PRE4)
          Length = 266

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
 Frame = +2

Query: 212 MVNNKK----GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI 343
           MVN ++    GT+ +S  +D GVI+AAD+  S G  +    V ++I +
Sbjct: 31  MVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPV 78
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>PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (Fragment)
          Length = 242

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEIN 346
           GT+ L   FD GVI+AAD   S G     + + +I+++N
Sbjct: 31  GTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVN 69
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>PSB4_MOUSE (P99026) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3)
          Length = 264

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGA 379
           GT+ L   FD GV++AAD   S G     + + +I+ +N     TM G +
Sbjct: 53  GTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVND---STMLGAS 99
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>PSB4_RAT (P34067) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (RN3)
          Length = 263

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGA 379
           GT+ L   FD GV++AAD   S G     + + +I+ +N     TM G +
Sbjct: 52  GTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVND---STMLGAS 98
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>HSLV_COXBU (Q83A95) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 181

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 227 KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI-NPYMLGTMAGGAA 382
           +GTT LS   +  V++  D + SMG  I     RK+  + N  ++   AGG A
Sbjct: 5   RGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTA 57
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>PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 precursor (EC|
           3.4.25.1)
          Length = 267

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           GTT +  I    +++ AD+RA+ G  I+ +  +K+  I+P +    AG AA
Sbjct: 35  GTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAA 85
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>PSB4_HUMAN (P28070) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (HSN3) (HsBPROS26)
          Length = 264

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEIN 346
           GT+ L   F+ GV++AAD   S G     + + +I+ +N
Sbjct: 53  GTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVN 91
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>PSB4_PIG (Q29384) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (Fragment)
          Length = 154

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEIN 346
           GT+ L   F+ GV++AAD   S G     + + +I+ +N
Sbjct: 53  GTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVN 91
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>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 246

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           K+GTT L    ++GV++  D R +    I  +++ K+ +I+ ++    AG
Sbjct: 34  KRGTTALGIKVEEGVVLGVDKRVT-SKLIEPESIEKVYQIDTHIGAATAG 82
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>HSLV_WOLPM (P61479) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 184

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 218 NNKK-GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKI 334
           NNK  GTT LS   DK V+V  D + S+G  +     +K+
Sbjct: 6   NNKMYGTTILSIRKDKSVVVIGDGQVSLGHTVIKSGAKKV 45
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>HSLV_RICCN (Q92II7) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 182

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI-NPYMLGTMAGGAA 382
           GTT L    ++ +I+AAD + S G  +   T RK+  I N  ++   AG  A
Sbjct: 9   GTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTA 60
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>NUOF_AQUAE (O66841) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain F) (NDH-1, chain F)
          Length = 426

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -1

Query: 352 VGINLDDFSHSLRRYVAAHAGPGVGGDDDALVED-EGERGGP 230
           +G N+      L  YVA  AG  + G++ AL+E  EG+RG P
Sbjct: 158 LGKNILGSGFDLEIYVARGAGAYICGEETALIESLEGKRGHP 199
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>HSLV_RICTY (Q68X53) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 182

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI-NPYMLGTMAGGAA 382
           GTT L    ++ +I+AAD + S G  +   T RK+  I N  ++   AG  A
Sbjct: 9   GTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTA 60
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>HSLV_PHOLL (Q7MYC2) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 175

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +2

Query: 233 TTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI-NPYMLGTMAGGAA 382
           TT +S   +  V++  D +A+MG  +    VRK+  + N  ++   AGG A
Sbjct: 1   TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTA 51
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>HSLV_VIBCH (Q9KNQ6) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 184

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 233 TTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI-NPYMLGTMAGGAA 382
           TT +S   +  V++A D + S+G  +     RK+  + N  +L   AGG A
Sbjct: 1   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTA 51
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>HSLV_VIBPA (Q87T20) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 182

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 233 TTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI-NPYMLGTMAGGAA 382
           TT +S   +  V++A D + S+G  +     RK+  + N  +L   AGG A
Sbjct: 1   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTA 51
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>PSMA_AERPE (Q9YC01) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 258

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           KKG T+L    ++GV++AA+ R  +G  +    + KI +I+ ++    AG
Sbjct: 36  KKGWTSLGIKTNEGVVIAAEKR-FIGPLVDIDDIDKIYKIDDHIGVAFAG 84
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>PSMA2_HALMA (Q5V1D4) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 244

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAA 382
           K+GT ++    + GV++AAD R +    I   ++ KI EI+ ++    AG  A
Sbjct: 33  KRGTASVGVRTEDGVVIAAD-RHARSPLIERDSIEKIHEIDSHVGVASAGHVA 84
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>HSLV_VIBVY (Q7MH57) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 183

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 233 TTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI-NPYMLGTMAGGAA 382
           TT +S   +  V++A D + S+G  +     RK+  + N  +L   AGG A
Sbjct: 1   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTA 51
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>HSLV_VIBVU (Q8DCP3) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 183

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 233 TTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI-NPYMLGTMAGGAA 382
           TT +S   +  V++A D + S+G  +     RK+  + N  +L   AGG A
Sbjct: 1   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTA 51
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>HSLV_RICPR (Q9ZDK9) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 182

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 230 GTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI-NPYMLGTMAGGAA 382
           GTT L     + +I+AAD + S G  +   T RK+  I N  ++   AG  A
Sbjct: 9   GTTILCLKKKEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTA 60
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>PSMA_ARCFU (O29760) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 246

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           K+G T +     +GVI+ AD R      + + T+ KI +I+ ++    +G
Sbjct: 32  KRGATAIGIKCKEGVILIADKRVG-SKLLEADTIEKIYKIDEHICAATSG 80
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>PSMA_THEAC (P25156) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 233

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           KKG+T L   F  GV++ +D +      I   ++ KI  I+ Y+    +G
Sbjct: 32  KKGSTALGMKFANGVLLISDKKV-RSRLIEQNSIEKIQLIDDYVAAVTSG 80
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>CBPA_CLOCL (P38058) Cellulose-binding protein A precursor|
          Length = 1848

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 203  TKAMVNNKKGTTTLSFIFDKG 265
            +KA +  + GT TL F+FDKG
Sbjct: 1574 SKAYLAKQTGTVTLEFVFDKG 1594
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>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding|
           protein precursor
          Length = 852

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 370 SHGSQHVGINLDDFSHSLRRYVAAHAGPGVGGDDDALVEDEGERGGP 230
           SHG  H   + D  S    R+V   A  G GG+++   E+E E   P
Sbjct: 151 SHGHGHEEEDEDVISSERPRHVLRRAPRGHGGEEEGEEEEEEEEVSP 197
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>HSLV_PHOPR (Q6LVI2) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 174

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 233 TTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEI-NPYMLGTMAGGAA 382
           TT +S   +  V++A D + S+G  +     RK+  + N  +L   AGG A
Sbjct: 1   TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTA 51
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>PSMA_THEVO (Q97BZ8) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 233

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           KKG+T L   F  GV++ +D +      I   ++ KI  I+ Y+    +G
Sbjct: 32  KKGSTALGLKFSNGVLLISDKKI-RSKLIEQNSLEKIQLIDDYVAAVTSG 80
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>PSMA_METJA (Q60177) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit) (20S proteasome
           alpha subunit)
          Length = 261

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/50 (24%), Positives = 27/50 (54%)
 Frame = +2

Query: 224 KKGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAG 373
           ++GTT +      GV++A D R +    +  +++ KI +I+ ++    +G
Sbjct: 33  RRGTTAIGIACKDGVVLAVDRRIT-SKLVKIRSIEKIFQIDDHVAAATSG 81
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>VL2_HPV48 (Q80925) Minor capsid protein L2|
          Length = 502

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 7/34 (20%)
 Frame = -1

Query: 310 YVAAHAGPGVGGDD-------DALVEDEGERGGP 230
           ++A  AGPG+GG+D       D   +  G  GGP
Sbjct: 122 FIAPDAGPGIGGEDIELFTFRDPATDVGGVSGGP 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,735,596
Number of Sequences: 219361
Number of extensions: 374107
Number of successful extensions: 1686
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 1673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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