>emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein
          Length = 1892

 Score = 1021 bits (515), Expect = 0.0
 Identities = 541/547 (98%), Gaps = 2/547 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    aaattcaatggtatcgggataaccaacggggaagaagccttggctgtggtgcggcttgtg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824  aaattcaatggtatcgggataaccaacggggaagaagccttggctgtggtgcggcttgtg 883

                                                                        
Query: 61   aagctagtcatccgaagcaacatggcggccgccccgacaaccgacgagcagctgctcgcg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884  aagctagtcatccgaagcaacatggcggccgccccgacaaccgacgagcagctgctcgcg 943

                                                                        
Query: 121  ttcgctcaactacccaaacacgggcgctacatggcggaggtgttcgccgtgcgcatcccc 180
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944  tacgctcaactacccaaacacgggcgctacatggcggaggtgttcgccgtgcgcatcccc 1003

                                                                        
Query: 181  gccaccgccggaggagacccgcccagcggcaccatctctttgcacggcggccactgcagc 240
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 gccaccgccggaggagacc-gcccagcggcaccatctctttgcacggcggccactgcagc 1062

                                                                        
Query: 241  agcgacttcatttacagcccggaagaagaacacacctcgcagcaaaccagctgcgacagc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 agcgacttcatttacagcccggaagaagaacacacctcgcagcaaaccagctgcgacagc 1122

                                                                        
Query: 301  cagggtaacatggtcctcactgggccatcggt-ggccacctcggcatacggtccaattgt 359
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1123 cagggtaacatggtcctcactgggccatcggttggccacctcggcatacggtccaattgt 1182

                                                                        
Query: 360  cttcaacctcgaccttcatgacggcactcgcgggcaagccgacgaggaggaggatgaaaa 419
            ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||
Sbjct: 1183 cttcaacctcgaccttcatgacggcaactgcgggcaagccgacgaggaggaggatgaaaa 1242

                                                                        
Query: 420  gaacaccgggaggatagtgtgcgacgccattggcggcgacttctccaactataataaggc 479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 gaacaccgggaggatagtgtgcgacgccattggcggcgacttctccaactataataaggc 1302

                                                                        
Query: 480  catatcagagactgtcctcacacgctgcggccccgcggaggtgatctacgcagttctaag 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 catatcagagactgtcctcacacgctgcggccccgcggaggtgatctacgcagttctaag 1362

                   
Query: 540  caacggc 546
            |||||||
Sbjct: 1363 caacggc 1369

>emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; clone MWG2037.uni
          Length = 328

 Score =  194 bits (98), Expect = 2e-46
 Identities = 208/244 (85%), Gaps = 13/244 (5%)
 Strand = Plus / Minus

                                                                       
Query: 300 ccagggtaacatggtcctcactgggccatcggtggccacctcggcatacggtccaattgt 359
           |||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 269 ccagggtaacatcgtgctcactgggccatcggtggtcacctcggcatacagtccaattgt 210

                                                                       
Query: 360 cttcaacctcgaccttcatgacggcactcgcgggcaagccgacgaggaggaggatgaaaa 419
           ||||| ||||||||| |||||||         | |||||||||||||||||||| ||   
Sbjct: 209 cttcagcctcgacctccatgacg---------gacaagccgacgaggaggaggaaga--- 162

                                                                       
Query: 420 gaacaccgggaggatagtgtgcgacgccattggcggcgacttctccaactataataaggc 479
           |||||||| ||||||||| |||||| ||||||||||||||||||| ||||| || | |||
Sbjct: 161 gaacaccgcgaggatagtctgcgacaccattggcggcgacttctctaactacaacagggc 102

                                                                       
Query: 480 catatcagagactgt-cctcacacgctgcggccccgcggaggtgatctacgcagttctaa 538
           |||||| |||||||| |  |||| |||  ||||||||||||||||||||||| || ||||
Sbjct: 101 catatcggagactgtacggcacaggctatggccccgcggaggtgatctacgccgtcctaa 42

               
Query: 539 gcaa 542
           ||||
Sbjct: 41  gcaa 38

>gb|AY109619.1| Zea mays CL9605_1 mRNA sequence
          Length = 1251

 Score =  163 bits (82), Expect = 7e-37
 Identities = 144/164 (87%), Gaps = 3/164 (1%)
 Strand = Plus / Minus

                                                                        
Query: 98   caaccgacgagcagctgctcgcgttcgctcaactacccaaacacgggcgctacatggcgg 157
            ||||||||||||| ||||| |||| |||| | || |||||||| || ||| |||||||||
Sbjct: 1009 caaccgacgagcaactgctggcgtacgctgagctgcccaaacatggccgcgacatggcgg 950

                                                                        
Query: 158  aggtgttcgccgtgcgcatccccgccaccgccggaggagacccgcccagc---ggcacca 214
            ||||||||||||||||||||||||||||||||||||||||||||||   |   |||||||
Sbjct: 949  aggtgttcgccgtgcgcatccccgccaccgccggaggagacccgccgccccatggcacca 890

                                                        
Query: 215  tctctttgcacggcggccactgcagcagcgacttcatttacagc 258
            || ||||  |||||||||||||| ||||||| ||||||||||||
Sbjct: 889  tcactttctacggcggccactgctgcagcgatttcatttacagc 846



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 103/121 (85%), Gaps = 3/121 (2%)
 Strand = Plus / Minus

                                                                       
Query: 265 gaagaacacacctcgcagcaaaccagctgcgacagccagggtaacatggtcctcactggg 324
           |||||| |||||||| ||||||||   |||||||||||||||||| | || || ||||||
Sbjct: 827 gaagaagacacctcgaagcaaacc---tgcgacagccagggtaacctcgtgctaactggg 771

                                                                       
Query: 325 ccatcggtggccacctcggcatacggtccaattgtcttcaacctcgaccttcatgacggc 384
           |||||  ||||||||||||||||| ||||||||| ||||| | || |||| ||||| |||
Sbjct: 770 ccatcattggccacctcggcatacagtccaattgccttcaccttctacctccatgatggc 711

            
Query: 385 a 385
           |
Sbjct: 710 a 710



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 426 cgggaggatagtgtgcgacgccattggcggcgacttctccaactataataaggccatatc 485
           |||||||||| | ||||||  ||| |||| ||||||||||||||| || | |||||||  
Sbjct: 669 cgggaggatactctgcgactgcatcggcgacgacttctccaactacaacagggccatagt 610

                                                                       
Query: 486 agagactgtcctcacacgctgcggccccgcggaggtgatctacgcagttctaagcaacgg 545
            ||||||||||  ||  |||  |||||||| || |||||||| || || || ||||||||
Sbjct: 609 cgagactgtccaaacgggctatggccccgctgaagtgatctatgccgtcctgagcaacgg 550

            
Query: 546 c 546
           |
Sbjct: 549 c 549

>emb|AJ234730.1|HVU234730 Hordeum vulgare genomic DNA fragment; clone MWG2037.rev
          Length = 331

 Score =  121 bits (61), Expect = 3e-24
 Identities = 64/65 (98%)
 Strand = Plus / Plus

                                                                       
Query: 240 cagcgacttcatttacagcccggaagaagaacacacctcgcagcaaaccagctgcgacag 299
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1   cagcgacttcatttacagcccggaagaagaacacgcctcgcagcaaaccagctgcgacag 60

                
Query: 300 ccagg 304
           |||||
Sbjct: 61  ccagg 65

>gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence
          Length = 1034

 Score =  107 bits (54), Expect = 4e-20
 Identities = 137/164 (83%), Gaps = 3/164 (1%)
 Strand = Plus / Plus

                                                                       
Query: 98  caaccgacgagcagctgctcgcgttcgctcaactacccaaacacgggcgctacatggcgg 157
           |||| |||||||| ||||| |||| |||| | || |||| ||| || ||| ||  || ||
Sbjct: 9   caactgacgagcaactgctggcgtacgctgagctgcccatacatggccgcgactcggagg 68

                                                                       
Query: 158 aggtgttcgccgtgcgcatccccgccaccgccggaggagacccgcc---cagcggcacca 214
           |||||||||||||||||||||||||||||||||||||| |||||||   | | |||| ||
Sbjct: 69  aggtgttcgccgtgcgcatccccgccaccgccggaggaaacccgccgcccggtggcagca 128

                                                       
Query: 215 tctctttgcacggcggccactgcagcagcgacttcatttacagc 258
           ||  |||  |||||||||||||| ||||||| ||||||||||||
Sbjct: 129 tcgttttctacggcggccactgctgcagcgatttcatttacagc 172



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 68/80 (85%), Gaps = 3/80 (3%)
 Strand = Plus / Plus

                                                                       
Query: 265 gaagaacacacctcgcagcaaaccagctgcgacagccagggtaacatggtcctcactggg 324
           |||||| |||||||| ||||||||   |||||||||||||| ||| | || || ||||||
Sbjct: 191 gaagaagacacctcgaagcaaacc---tgcgacagccagggcaacctcgtgctaactggg 247

                               
Query: 325 ccatcggtggccacctcggc 344
           |||||  |||||||||||||
Sbjct: 248 ccatcattggccacctcggc 267



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 426 cgggaggatagtgtgcgacgccattggcggcgacttctccaactataataaggccatatc 485
           |||||||||| | ||||||  ||| ||||| |||||||||||||| || | |||||||  
Sbjct: 349 cgggaggataatctgcgactgcatcggcggagacttctccaactacaacagggccatagt 408

                      
Query: 486 agagactgtcc 496
            ||||||||||
Sbjct: 409 cgagactgtcc 419

>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22
              map R10571S, complete sequence
          Length = 154441

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 149    acatggcggaggtgttcgccgtgcgc 174
              ||||||||||||| ||||||||||||
Sbjct: 149843 acatggcggaggtcttcgccgtgcgc 149818

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 149     acatggcggaggtgttcgccgtgcgc 174
               ||||||||||||| ||||||||||||
Sbjct: 3165142 acatggcggaggtcttcgccgtgcgc 3165167

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 149     acatggcggaggtgttcgccgtgcgc 174
               ||||||||||||| ||||||||||||
Sbjct: 3173847 acatggcggaggtcttcgccgtgcgc 3173872

>gb|AC144728.11| Medicago truncatula clone mth2-6g7, complete sequence
          Length = 105161

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 402   cgaggaggaggatgaaaagaa 422
             |||||||||||||||||||||
Sbjct: 79209 cgaggaggaggatgaaaagaa 79189

>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 165    cgccgtgcgcatccccgccaccgcc 189
              |||||||| ||||||||||||||||
Sbjct: 211639 cgccgtgcccatccccgccaccgcc 211663

>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 165    cgccgtgcgcatccccgccaccgcc 189
              |||||||| ||||||||||||||||
Sbjct: 148129 cgccgtgcccatccccgccaccgcc 148153

>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 165    cgccgtgcgcatccccgccaccgcc 189
              |||||||| ||||||||||||||||
Sbjct: 205914 cgccgtgcccatccccgccaccgcc 205890

>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 234     ctgcagcagcgacttcattt 253
               ||||||||||||||||||||
Sbjct: 2108968 ctgcagcagcgacttcattt 2108987

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    cagctgctcgcgttcgctca 128
              ||||||||||||||||||||
Sbjct: 230472 cagctgctcgcgttcgctca 230491

>gb|AC159702.1| Trypanosoma brucei chromosome 7 clone RPCI93-30D13, complete sequence
          Length = 171752

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   ctgcagcagcgacttcattt 253
             ||||||||||||||||||||
Sbjct: 96266 ctgcagcagcgacttcattt 96247

>ref|XM_369803.1| Magnaporthe grisea 70-15 hypothetical protein (MG06318.4) partial
           mRNA
          Length = 3699

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 gccgacgaggaggaggatga 416
           ||||||||||||||||||||
Sbjct: 964 gccgacgaggaggaggatga 983

>ref|XM_421760.1| PREDICTED: Gallus gallus transcription factor Tcf4 (TCF4), mRNA
          Length = 4491

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 399  cgacgaggaggaggatgaaaagaa 422
            ||||||||||||||| ||||||||
Sbjct: 4002 cgacgaggaggaggaggaaaagaa 3979

>ref|XM_820996.1| Trypanosoma brucei TREU927 clone RPCI93-30D13 ATP-dependent DEAD/H
            RNA helicase (Tb927.7.7300) partial mRNA
          Length = 3051

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  ctgcagcagcgacttcattt 253
            ||||||||||||||||||||
Sbjct: 1284 ctgcagcagcgacttcattt 1265

>ref|XM_802673.1| Trypanosoma cruzi strain CL Brener DNA excision repair protein
            (Tc00.1047053508675.20) partial mRNA
          Length = 3357

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  cgacgaggaggaggatgaaa 418
            ||||||||||||||||||||
Sbjct: 2301 cgacgaggaggaggatgaaa 2320

>ref|XM_813897.1| Trypanosoma cruzi strain CL Brener cyclin (Tc00.1047053506945.270)
           partial mRNA
          Length = 636

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 407 aggaggatgaaaagaacacc 426
           ||||||||||||||||||||
Sbjct: 590 aggaggatgaaaagaacacc 609

>emb|AL158046.12| Human DNA sequence from clone RP5-1092K5 on chromosome 10 Contains part
             of the gene for a novel protein (KIAA1617) and a
             cytochrome c oxidase subunit VIc (COX6) pseudogene,
             complete sequence
          Length = 119265

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   aggaggaggatgaaaagaac 423
             ||||||||||||||||||||
Sbjct: 12194 aggaggaggatgaaaagaac 12175

>emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gene cluster for balhimycin,
             strain DSM 5908
          Length = 66669

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 507   cggccccgcggaggtgatctacgc 530
             |||||||||||| |||||||||||
Sbjct: 44569 cggccccgcggacgtgatctacgc 44592

>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    ccgtgcgcatccccgccacc 186
              ||||||||||||||||||||
Sbjct: 158447 ccgtgcgcatccccgccacc 158466

>gb|AY113531.1| Drosophila melanogaster RE60835 full insert cDNA
          Length = 925

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 cgacgaggaggaggatgaaa 418
           ||||||||||||||||||||
Sbjct: 680 cgacgaggaggaggatgaaa 699

>ref|NM_135833.2| Drosophila melanogaster CG16865-RA (CG16865), mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 cgacgaggaggaggatgaaa 418
           ||||||||||||||||||||
Sbjct: 680 cgacgaggaggaggatgaaa 699

>gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, region 34D-34D, BAC clone
              BACR30I21, complete sequence
          Length = 161682

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    cgacgaggaggaggatgaaa 418
              ||||||||||||||||||||
Sbjct: 142321 cgacgaggaggaggatgaaa 142340

>gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, region 34D-35X, BAC clone
            BACR16P12, complete sequence
          Length = 171598

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  cgacgaggaggaggatgaaa 418
            ||||||||||||||||||||
Sbjct: 9464 cgacgaggaggaggatgaaa 9483

>gb|AC004863.5|AC004863 Homo sapiens PAC clone RP4-708P22 from 7, complete sequence
          Length = 133030

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    ccttggctgtggtgcggctt 57
             ||||||||||||||||||||
Sbjct: 23758 ccttggctgtggtgcggctt 23739

>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete
              sequence
          Length = 304772

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    cgacgaggaggaggatgaaa 418
              ||||||||||||||||||||
Sbjct: 158836 cgacgaggaggaggatgaaa 158855

>gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosome 7, complete sequence
          Length = 212016

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    gggaagaagccttggctgtg 48
             ||||||||||||||||||||
Sbjct: 76915 gggaagaagccttggctgtg 76896


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,229,506
Number of Sequences: 3902068
Number of extensions: 4229506
Number of successful extensions: 81682
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81461
Number of HSP's gapped (non-prelim): 217
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)