>ML423_ARATH (Q93VR4) MLP-like protein 423|
          Length = 155

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 374 AGDDLRPGRLREVSVISGLP-ASTSTERLDLLDDARRAFGFTITGGE 511
           AGD   PG +R ++   G P    S ER++ +D   ++  ++I GGE
Sbjct: 46  AGDGNAPGSIRLITYGEGSPLVKISAERIEAVDLENKSMSYSIIGGE 92

>MPAC1_CARBE (P38949) Major pollen allergen Car b 1 isoforms 1A and 1B (Car B I)|
          Length = 159

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +2

Query: 392 PGRLREVSVISGLPASTSTERLDLLDDARRAFGFTITGGE 511
           PG ++ ++   G+P     ER+D +D+A   + +T+  G+
Sbjct: 50  PGTIKNITFAEGIPFKFVKERVDEVDNANFKYNYTVIEGD 89

>HOXX_BRAJA (P31907) Hydrogenase maturation factor hoxX|
          Length = 566

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 331 VHLGAVEAADDGPDRGWRRLDTLRDEGGAL 242
           +HL  +EAA+   D  WR ++ + D   A+
Sbjct: 341 IHLAEIEAAESAADESWRNINAIDDLARAI 370

>CCA_PSEPK (Q88QU2) Multifunctional CCA protein [Includes: CCA-adding enzyme|
           (EC 2.7.7.25) (EC 2.7.7.21) (tRNA
           nucleotidyltransferase) (tRNA
           adenylyl-/cytidylyl-transferase) (tRNA
           CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC
           3.1.3.-); 2',3'-cycli
          Length = 368

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = +2

Query: 239 GQCSSLVAQRIEAPPAAVWAIVRRFDC---PQVYKHFIRSC--ALRPDPEAG 379
           G+C +   Q +E P  A+  ++++FD    PQ ++ F+  C  A R D E G
Sbjct: 267 GECLAQGNQALELPATALLELLQKFDVYRRPQRFEDFLTVCEMAARGDGEQG 318

>UBP49_MOUSE (Q6P9L4) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 49)
           (Ubiquitin-specific-processing protease 49)
           (Deubiquitinating enzyme 49)
          Length = 685

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +2

Query: 323 QVYKHF--IRSCALRPDPEAGDDLRPGRLREVSVISGLPASTSTERLDL 463
           QV  H    R C L  DP   + L P      + +SG PAS+S   L +
Sbjct: 266 QVLSHLQKFRECFLNLDPSTSEHLFPQATNGKAQLSGRPASSSAAELSV 314

>L18A_LUPLU (P52778) Protein LlR18A (LlPR10.1A)|
          Length = 156

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 392 PGRLREVSVISGLPASTSTERLDLLDDARRAFGFTITGGE 511
           PG ++++  I     S    +LD +D+A   + ++I GGE
Sbjct: 50  PGTIKKIIAIHDGHTSFVLHKLDAIDEANLTYNYSIIGGE 89

>UBP49_HUMAN (Q70CQ1) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 49)
           (Ubiquitin-specific-processing protease 49)
           (Deubiquitinating enzyme 49)
          Length = 688

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = +2

Query: 323 QVYKHF--IRSCALRPDPEAGDDLRPGRLREVSVISGLPASTSTERLDLLDDARRA 484
           QV  H    R C L  DP   + L P      + +SG P ++S   L L +D   A
Sbjct: 269 QVLSHLQKFRECFLNLDPSKTEHLFPKATNGKTQLSGKPTNSSATELSLRNDRAEA 324


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,834,847
Number of Sequences: 219361
Number of extensions: 589502
Number of successful extensions: 2344
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2344
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)