ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart41g05 |
|---|---|
| Clone Library Name | barley_pub |
>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor| Length = 254 Score = 60.8 bits (146), Expect = 3e-09 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 2/98 (2%) Frame = +3 Query: 213 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 392 N+T +L AG + F+ + ST QAN ++ G T+F P D+AF + K L++L Sbjct: 46 NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105 Query: 393 SQQDQVTLVQAHIVPTFYSMESFE--TASNPVRTQASG 500 ++ LV H +P +YS+ F+ + S PV T A G Sbjct: 106 TKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGG 143
>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor| (AtAGP8) Length = 420 Score = 53.1 bits (126), Expect = 6e-07 Identities = 39/123 (31%), Positives = 62/123 (50%) Frame = +3 Query: 201 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 380 A+ N+T +LEKAG T F L+ S+ L + + G TVFAP+D AF + Sbjct: 185 ASLSNITGLLEKAGCKT-FANLLVSSGV---LKTYESAVEKGLTVFAPSDEAFKAEGVPD 240 Query: 381 LNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGTDGPCTVNVTATSNSARHVS 560 L L+Q + V+L++ H + + S +T N + T A+ G + T+TS + Sbjct: 241 LTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDL-TTSTSGDEVILH 299 Query: 561 TGI 569 TG+ Sbjct: 300 TGV 302
>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor| Length = 422 Score = 52.8 bits (125), Expect = 8e-07 Identities = 43/129 (33%), Positives = 67/129 (51%) Frame = +3 Query: 201 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 380 A N+T +LEKAG T F L+ S+ + + + G TVFAP+D AF + Sbjct: 186 AGVSNITGLLEKAGCKT-FANLLVSSGV---IKTFESTVEKGLTVFAPSDEAFKARGVPD 241 Query: 381 LNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGTDGPCTVNVTATSNSARHVS 560 L +L+Q + V+L++ H + + S +T + + T A T+G ++T TS S V Sbjct: 242 LTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLA--TNGAGKYDLT-TSTSGDEV- 297 Query: 561 TGIVHTTVG 587 I+HT VG Sbjct: 298 --ILHTGVG 304
>Y1483_SYNY3 (P74615) Hypothetical protein sll1483 precursor| Length = 180 Score = 45.4 bits (106), Expect = 1e-04 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%) Frame = +3 Query: 201 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 380 AA + ++E A F L+A+ + + A + E FTVFAPT++AF +L GT Sbjct: 40 AATDSAMTIVEVAAGNETFSTLVAAVKAADLVEALSAEGP--FTVFAPTNDAFAALPAGT 97 Query: 381 LNSL----SQQDQVTLVQAHIVP---TFYSMESFETASNPVRTQA-SGTDGPCTVNVTAT 536 + SL ++ V ++ H+VP T ++S E AS DG VN Sbjct: 98 VESLLLPENKDKLVKILTYHVVPGKITAAQVQSGEVASLAGEALTFKVKDGKVKVNKATV 157 Query: 537 SNSARHVSTGIVH 575 ++ S G++H Sbjct: 158 ISADVDASNGVIH 170
>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like| laminin-type EGF-like and link domain-containing scavenger receptor 1) (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Hyaluronan receptor for endocytosis) [ Length = 2551 Score = 40.0 bits (92), Expect = 0.005 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 7/92 (7%) Frame = +3 Query: 243 QYTKFIRLMASTQQDTQLNAQANESDTG--FTVFAPTDNAFNSLKPGTLNSL----SQQD 404 +Y+KF L+ ++T L +E G +T+F P + A N++K GTL+ L + Sbjct: 527 RYSKFRSLL----EETNLGHALDEDGVGGPYTIFVPNNEALNNMKDGTLDYLLSPEGSRK 582 Query: 405 QVTLVQAHIVPTFYSMESFETASNP-VRTQAS 497 + LV+ HIVP F +E S P +R+ A+ Sbjct: 583 LLELVRYHIVP-FTQLEVATLISTPHIRSMAN 613
>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog| Length = 133 Score = 39.3 bits (90), Expect = 0.009 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = +3 Query: 255 FIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 398 F L+A+ Q + A E D FTVFAP D+AF L PGT+ +L Q Sbjct: 14 FSTLVAAVQAAGLVETLAGEGD--FTVFAPNDDAFAKLPPGTIQTLVQ 59
>PAM1_YEAST (P37304) Protein PAM1| Length = 830 Score = 38.1 bits (87), Expect = 0.019 Identities = 24/69 (34%), Positives = 31/69 (44%) Frame = +3 Query: 339 APTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGTDGPCT 518 AP N NS P L SLSQ + Q +I +F T+ NP GT T Sbjct: 733 APCVNQLNSDSPPQLQSLSQNGTSKVPQINITQPSPIQTNFATSDNPAAVIKLGTPSEDT 792 Query: 519 VNVTATSNS 545 V+ AT+N+ Sbjct: 793 VSAAATANN 801
>MP70_MYCTU (P0A668) Immunogenic protein MPT70 precursor| Length = 193 Score = 37.0 bits (84), Expect = 0.043 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 4/105 (3%) Frame = +3 Query: 291 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMES 458 QLN Q N DT +TVFAPT+ AF+ L T++ L + + T++ + Sbjct: 80 QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLT----SILTYHVVAG 135 Query: 459 FETASNPVRTQASGTDGPCTVNVTATSNSARHVSTGIVHTTVGTA 593 + +N V T+ T +V VT NS + + +V V TA Sbjct: 136 QTSPANVVGTRQ--TLQGASVTVTGQGNSLKVGNADVVCGGVSTA 178
>MP70_MYCBO (P0A669) Immunogenic protein MPB70 precursor| Length = 193 Score = 37.0 bits (84), Expect = 0.043 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 4/105 (3%) Frame = +3 Query: 291 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMES 458 QLN Q N DT +TVFAPT+ AF+ L T++ L + + T++ + Sbjct: 80 QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLT----SILTYHVVAG 135 Query: 459 FETASNPVRTQASGTDGPCTVNVTATSNSARHVSTGIVHTTVGTA 593 + +N V T+ T +V VT NS + + +V V TA Sbjct: 136 QTSPANVVGTRQ--TLQGASVTVTGQGNSLKVGNADVVCGGVSTA 178
>Y1735_SYNY3 (P73392) Hypothetical protein sll1735| Length = 133 Score = 36.6 bits (83), Expect = 0.056 Identities = 17/29 (58%), Positives = 20/29 (68%) Frame = +3 Query: 312 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 398 +S FTVFAPTD AF L PGT+ +L Q Sbjct: 31 QSPGPFTVFAPTDTAFAKLPPGTITTLVQ 59
>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor| Length = 424 Score = 35.8 bits (81), Expect = 0.096 Identities = 23/76 (30%), Positives = 36/76 (47%) Frame = +3 Query: 324 GFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGT 503 G TVF P D+A P N L+ + + VPT+YSM ++ + P+ T A T Sbjct: 220 GMTVFCPGDDAMKGFLPKYKN-LTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLA--T 276 Query: 504 DGPCTVNVTATSNSAR 551 DG +T ++ + Sbjct: 277 DGANKFELTVQNDGEK 292
>HA34_BRELC (Q99074) HAM34 protein| Length = 173 Score = 34.7 bits (78), Expect = 0.21 Identities = 27/108 (25%), Positives = 43/108 (39%) Frame = +3 Query: 270 ASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYS 449 AST+Q T +A + G T P D + P + + + + Sbjct: 55 ASTEQTTTAGPEAAGATNGTTTTPPADGTQTATAPLDATATEESSASGEMTPTVGTDTSD 114 Query: 450 MESFETASNPVRTQASGTDGPCTVNVTATSNSARHVSTGIVHTTVGTA 593 S TA+ P + S T G T + +S+SA ++G HTT+ A Sbjct: 115 QVSDSTAAGPSTPEGSMT-GTSTPKASDSSSSATDTTSGASHTTMAVA 161
>VPS33_YEAST (P20795) Vacuolar protein sorting 33 (SLP1 protein)| Length = 691 Score = 34.3 bits (77), Expect = 0.28 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = +3 Query: 378 TLNSLSQQDQVTLVQAHIVPTFYSMESFE--TASNPVR 485 TLN +SQ D+V +VQ ++P S+ +F+ T S PVR Sbjct: 21 TLNEISQNDEVLVVQPSVLPVLNSLLTFQDLTQSTPVR 58
>STAB2_RAT (Q8CFM6) Stabilin-2 precursor (Hyaluronan receptor for endocytosis)| [Contains: 175 kDa stabilin-2 (175 kDa hyaluronan receptor for endocytosis)] (Fragment) Length = 1431 Score = 34.3 bits (77), Expect = 0.28 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = +3 Query: 213 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANES-DTGFTVFAPTDNAFNSLKPGTLNS 389 N+T V G YTKF +L+ QD+ L + +S T TVF PTD A +L P + Sbjct: 607 NLTTVAANHG-YTKFSKLI----QDSGLLSVITDSIHTPVTVFWPTDKALEALPPEQQDF 661 Query: 390 LSQQDQVTLVQAHI 431 L QD +++++ Sbjct: 662 LFNQDNKDKLKSYL 675
>TAU_HYLLA (Q5YCV9) Microtubule-associated protein tau| Length = 775 Score = 33.9 bits (76), Expect = 0.37 Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 15/85 (17%) Frame = +2 Query: 275 DAAGHAAER--AGQRVGHGLHGVRPHRQRLQQPQAGHPQLAL-------------AAGPG 409 +AAGH + +G+ V G G R Q +G P L GP Sbjct: 116 EAAGHVTQEPESGKVVREGFLGEPGPRSXSHQLASGMPGAPLLPEGPREATRQPSGTGPE 175 Query: 410 DARAGAHRPHLLLHGVLRDRQQPRP 484 D G H P LL H +L D Q P Sbjct: 176 DTEGGRHAPELLKHQLLGDLHQEGP 200
>CROC_DROME (P32027) Fork head domain protein crocodile (FKH protein FD1)| Length = 508 Score = 33.5 bits (75), Expect = 0.48 Identities = 23/83 (27%), Positives = 33/83 (39%) Frame = +2 Query: 245 VHQVHPADGVDAAGHAAERAGQRVGHGLHGVRPHRQRLQQPQAGHPQLALAAGPGDARAG 424 +H VH A AA H A++ + V H H + P Q +GH ++ G A G Sbjct: 295 MHHVHHA----AAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGG 350 Query: 425 AHRPHLLLHGVLRDRQQPRPHPG 493 + P +P PH G Sbjct: 351 WYTPE-------TPPSEPVPHNG 366
>POSTN_HUMAN (Q15063) Periostin precursor (PN) (Osteoblast-specific factor 2)| (OSF-2) Length = 836 Score = 33.5 bits (75), Expect = 0.48 Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 11/97 (11%) Frame = +3 Query: 318 DTGFTVFAPTDNAFNSLKPGTLNSLSQQDQV---TLVQAHIVPTFYSMES------FETA 470 D FT+FAPT+ AF L G L + D+V L++ HI+ T ES FET Sbjct: 266 DGHFTLFAPTNEAFEKLPRGVLERI-MGDKVASEALMKYHILNTLQCSESIMGGAVFETL 324 Query: 471 SNPVRTQASGTDG-PCTVNVTATSNSARHV-STGIVH 575 T G DG TVN N V + G++H Sbjct: 325 EG--NTIEIGCDGDSITVNGIKMVNKKDIVTNNGVIH 359
>BGH3_RABIT (Q95215) Transforming growth factor-beta-induced protein ig-h3| precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP) Length = 683 Score = 33.5 bits (75), Expect = 0.48 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = +3 Query: 327 FTVFAPTDNAFNSLKPGTLNSL 392 +TVFAPT+ AF +L PG LN L Sbjct: 537 YTVFAPTNEAFQALPPGELNKL 558 Score = 31.2 bits (69), Expect = 2.4 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 18/101 (17%) Frame = +3 Query: 327 FTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQA---HIV---------------PTFYSM 452 FT+FAP++ A+ SL L+SL + L+ A H+V + Y Sbjct: 138 FTIFAPSNEAWASLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDELKHGMALTSMYQN 197 Query: 453 ESFETASNPVRTQASGTDGPCTVNVTATSNSARHVSTGIVH 575 F+ P +G TVN + H + G+VH Sbjct: 198 SKFQIHHYP--------NGIVTVNCARLLKADHHATNGVVH 230 Score = 30.0 bits (66), Expect = 5.3 Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 8/129 (6%) Frame = +3 Query: 213 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 392 N+ ++E + +A++ +T L ESD FT+ APT+ A + TLN + Sbjct: 242 NIQQIIEIEDTFETLRAAVAASGLNTLL-----ESDGQFTLLAPTNEAKEKIPTETLNRI 296 Query: 393 SQQDQV--TLVQAHIVPTFYSMESFETASNPVRTQASGTDGPC-----TVNVTA-TSNSA 548 + L+ HI+ + E+ + +A+ + C T+N A SN Sbjct: 297 LGDPEALRDLLNNHILKSAMCAEAIVAGLSMETLEATTLEVGCSGDMLTINGKAIISNKD 356 Query: 549 RHVSTGIVH 575 + G++H Sbjct: 357 VLATNGVIH 365
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 32.7 bits (73), Expect = 0.81 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Frame = +3 Query: 270 ASTQQDTQLNAQANESDTGFTVFAP-TDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFY 446 A +D++ NAQ E+D T F P ++L +L D++ +Q +PT Sbjct: 281 AEEDRDSKTNAQTAETDADDTEFEPQAGEDEDNLSDDSL------DEIISLQVPTLPTTV 334 Query: 447 SMESFETASNPVRTQASGTDGPCTVNVTATSNSAR 551 + +S P + T+GP +V + T+ +AR Sbjct: 335 TGQSTIGTGTPTMLRGRKTNGPGSVISSYTATTAR 369
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 32.7 bits (73), Expect = 0.81 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 8/118 (6%) Frame = +3 Query: 219 TAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 398 + +L +GQ + + T + L+ Q + GF VF+ T L GT++ + Sbjct: 1408 SGILFGSGQSSGITSVSGETSGISDLSGQPS----GFPVFSGTATRTPDLASGTISGSGE 1463 Query: 399 QDQVTLVQ---AHIVPTFYSME----SFETASNPV-RTQASGTDGPCTVNVTATSNSA 548 +T V + PT + E S E + P T+ SGT G TV+V+ S+ A Sbjct: 1464 SSGITFVDTSFVEVTPTTFREEEGLGSVELSGFPSGETELSGTSG--TVDVSEQSSGA 1519
>BGH3_MOUSE (P82198) Transforming growth factor-beta-induced protein ig-h3| precursor (Beta ig-h3) Length = 683 Score = 32.3 bits (72), Expect = 1.1 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 10/98 (10%) Frame = +3 Query: 312 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQA---HIVPTFYSMESFETASNPV 482 E FT+FAP++ A++SL L+SL + L+ A H+V + + Sbjct: 133 EGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDELKHGMTLT 192 Query: 483 RTQASGT-------DGPCTVNVTATSNSARHVSTGIVH 575 + +G TVN + H + G+VH Sbjct: 193 SMYQNSNIQIHHYPNGIVTVNCARLLKADHHATNGVVH 230 Score = 30.8 bits (68), Expect = 3.1 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Frame = +3 Query: 210 PNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNS 389 P + V++ +F L+A+ Q + E +TVFAPT+ AF ++ P LN Sbjct: 500 PPMGTVMDVLKGDNRFSMLVAAIQSAGLMEILNREGV--YTVFAPTNEAFQAMPPEELNK 557 Query: 390 L--SQQDQVTLVQAHI 431 L + ++ +++ HI Sbjct: 558 LLANAKELTNILKYHI 573 Score = 29.6 bits (65), Expect = 6.9 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 9/130 (6%) Frame = +3 Query: 213 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 392 N+ ++E + +A++ +T L E D FT+ APT+ AF + TLN + Sbjct: 242 NIQQIIEIEDTFETLRAAVAASGLNTVL-----EGDGQFTLLAPTNEAFEKIPAETLNRI 296 Query: 393 SQQDQV--TLVQAHIVPTFYSME------SFETASNPVRTQASGTDGPCTVNVTAT-SNS 545 + L+ HI+ + E S ET D T+N A SN Sbjct: 297 LGDPEALRDLLNNHILKSAMCAEAIVAGMSMETLGGTTLEVGCSGD-KLTINGKAVISNK 355 Query: 546 ARHVSTGIVH 575 + G++H Sbjct: 356 DILATNGVIH 365
>MP70_MYCKA (Q49614) Immunogenic protein MPT70 analog precursor (Fragment)| Length = 121 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%) Frame = +3 Query: 291 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSL 392 +LN Q N DT +TVFAPTD AF+ L T+ L Sbjct: 78 RLNPQVNLVDTLNNGQYTVFAPTDPAFDKLPASTIVQL 115
>STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)| Length = 2571 Score = 31.2 bits (69), Expect = 2.4 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 4/101 (3%) Frame = +3 Query: 213 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 392 NVTA E G Y F RL+ L + S FT+ PTD+A +L P N L Sbjct: 1728 NVTAAAESFG-YKIFSRLLTVAGLLPMLQ---DASHRPFTMLWPTDSALQALPPDRKNWL 1783 Query: 393 SQQDQ----VTLVQAHIVPTFYSMESFETASNPVRTQASGT 503 +D +++ H++ ++ S +RT T Sbjct: 1784 FHEDHRDKLAAILRGHMIRNIEALASDLPNLGQLRTMHGNT 1824
>BGH3_HUMAN (Q15582) Transforming growth factor-beta-induced protein ig-h3| precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP) Length = 683 Score = 30.8 bits (68), Expect = 3.1 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 10/98 (10%) Frame = +3 Query: 312 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQA---HIVPTFYSMESFETASNPV 482 E FT+FAP++ A+ SL L+SL + L+ A H+V + + Sbjct: 133 EGPGSFTIFAPSNEAWASLPAEVLDSLVSNVNIELLNALRYHMVGRRVLTDELKHGMTLT 192 Query: 483 RTQASGT-------DGPCTVNVTATSNSARHVSTGIVH 575 + +G TVN + H + G+VH Sbjct: 193 SMYQNSNIQIHHYPNGIVTVNCARLLKADHHATNGVVH 230
>VID21_EMENI (Q5B4Q8) Chromatin modification-related protein vid21| Length = 1447 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +2 Query: 356 LQQPQAGHPQLALAAGPGDARAGAHRPHLL-LHGVLRDRQQPRPHP 490 +QQ A P +A+ A P +AR L +L+ RQQP HP Sbjct: 1149 MQQNNAPRPNMAMQASPDNARVIREANRLQEQQRILQSRQQPSQHP 1194
>BGH3_PIG (O11780) Transforming growth factor-beta-induced protein ig-h3| precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP) Length = 683 Score = 30.4 bits (67), Expect = 4.0 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 10/98 (10%) Frame = +3 Query: 312 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQA---HIVPTFYSMESFETASNPV 482 E FT+FAP++ A+ SL L+SL + L+ A H+V + + Sbjct: 133 EGPGSFTIFAPSNEAWASLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDELKHGMALT 192 Query: 483 RTQASGT-------DGPCTVNVTATSNSARHVSTGIVH 575 + +G TVN + H + G+VH Sbjct: 193 SMYQNSNIQIHHYPNGIVTVNCARLLKADHHATNGVVH 230 Score = 30.0 bits (66), Expect = 5.3 Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 11/134 (8%) Frame = +3 Query: 210 PNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNS 389 P + V++ +F L+A+ Q L N +TVFAPT+ AF +L G N Sbjct: 500 PPMGTVMDVLKGDNRFSMLVAAIQS-AGLTETLNREGV-YTVFAPTNEAFQALPLGERNK 557 Query: 390 L--SQQDQVTLVQAHI---------VPTFYSMESFETASNPVRTQASGTDGPCTVNVTAT 536 L + ++ +++ H+ + ++S + + + S + TVN Sbjct: 558 LLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGD----KLEVSSKNSLVTVNKEPV 613 Query: 537 SNSARHVSTGIVHT 578 + + + G+VHT Sbjct: 614 AEADIMATNGVVHT 627
>PTPRV_RAT (Q64612) Receptor-type tyrosine-protein phosphatase V precursor (EC| 3.1.3.48) (Embryonic stem cell protein-tyrosine phosphatase) (ES cell phosphatase) (Osteotesticular protein-tyrosine phosphatase) (OST-PTP) Length = 1711 Score = 30.0 bits (66), Expect = 5.3 Identities = 24/81 (29%), Positives = 33/81 (40%) Frame = +3 Query: 270 ASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYS 449 + + + QL A NES GF + LK L Q +TL A PT Sbjct: 76 SGSPEGQQLQAHTNES--GFEFHGLVPGSRYQLKLTVLRPCWQNVTITLT-ARTAPTVVR 132 Query: 450 MESFETASNPVRTQASGTDGP 512 +A +P R +AS +D P Sbjct: 133 GLQLHSAGSPARLEASWSDAP 153
>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]| Length = 2559 Score = 29.6 bits (65), Expect = 6.9 Identities = 22/73 (30%), Positives = 34/73 (46%) Frame = +3 Query: 213 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 392 N+T V G YTKF +L+ Q L + T T+F PTD A +L + L Sbjct: 1750 NLTTVAANHG-YTKFSKLI---QDSGLLKVITDPMHTPVTLFWPTDKALQALPQEQQDFL 1805 Query: 393 SQQDQVTLVQAHI 431 +D ++A++ Sbjct: 1806 FNEDNKDKLKAYL 1818
>POSTN_MOUSE (Q62009) Periostin precursor (PN) (Osteoblast-specific factor 2)| (OSF-2) Length = 838 Score = 29.6 bits (65), Expect = 6.9 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = +3 Query: 318 DTGFTVFAPTDNAFNSLKPGTLNSLSQQDQV---TLVQAHIVPTFYSMES 458 D FT+FAPT+ AF L G L + D+V L++ HI+ T E+ Sbjct: 268 DGHFTLFAPTNEAFEKLPRGVLERI-MGDKVASEALMKYHILNTLQCSEA 316
>TAU_PANTR (Q5YCW1) Microtubule-associated protein tau| Length = 775 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 401 GPGDARAGAHRPHLLLHGVLRDRQQPRP 484 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>TAU_GORGO (Q5YCW0) Microtubule-associated protein tau| Length = 775 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 401 GPGDARAGAHRPHLLLHGVLRDRQQPRP 484 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>TAU_PONPY (Q5S6V2) Microtubule-associated protein tau| Length = 757 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 401 GPGDARAGAHRPHLLLHGVLRDRQQPRP 484 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>TAU_HUMAN (P10636) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 757 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 401 GPGDARAGAHRPHLLLHGVLRDRQQPRP 484 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>HNRPU_HUMAN (Q00839) Heterogenous nuclear ribonucleoprotein U (hnRNP U)| (Scaffold attachment factor A) (SAF-A) (p120) (pp120) Length = 824 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = +2 Query: 266 DGVDAAGHAAERAGQRVGHGLHGVRPHRQRLQQPQAGHPQLALAAG 403 +G D G E AG GHG +P + QQPQ AAG Sbjct: 140 EGEDELGDEEEGAGDENGHGEQQPQPPATQQQQPQQQRGAAKEAAG 185
>MP83_MYCTU (P0A670) Cell surface lipoprotein MPT83 precursor (Lipoprotein p23)| Length = 220 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Frame = +3 Query: 291 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQV--TLVQAHIV 434 +LN N DT +TVFAPT+ AF+ L T++ L ++ +++ H++ Sbjct: 106 KLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVI 159
>MP83_MYCBO (P0A671) Cell surface lipoprotein MPB83 precursor (Lipoprotein p23)| Length = 220 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Frame = +3 Query: 291 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQV--TLVQAHIV 434 +LN N DT +TVFAPT+ AF+ L T++ L ++ +++ H++ Sbjct: 106 KLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVI 159 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,574,536 Number of Sequences: 219361 Number of extensions: 656769 Number of successful extensions: 2766 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 2646 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2752 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
