ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart41e09 |
|---|---|
| Clone Library Name | barley_pub |
>IF4E1_WHEAT (P29557) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) Length = 215 Score = 263 bits (672), Expect = 3e-70 Identities = 119/156 (76%), Positives = 123/156 (78%) Frame = +2 Query: 107 MAEDTETRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLENAWTFWFDNSQGKSRAV 286 MAEDTETRP HPLENAWTFWFDN QGKSR V Sbjct: 1 MAEDTETRPASAGAEEREEGEIADDGDGSSAAAAGRITAHPLENAWTFWFDNPQGKSRQV 60 Query: 287 AWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHCFKDKIEPKWEDPICANGGKWT 466 AWGSTIHPIHTFSTVEDFW LYNNIH+PSKLNVGADFHCFK+KIEPKWEDPICANGGKWT Sbjct: 61 AWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFHCFKNKIEPKWEDPICANGGKWT 120 Query: 467 ISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 ISCG+GKSDTFWLHTLLA+IGEQFDFGDEICGAVVS Sbjct: 121 ISCGRGKSDTFWLHTLLAMIGEQFDFGDEICGAVVS 156
>IF4E1_ORYSA (P48599) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) Length = 227 Score = 236 bits (603), Expect = 3e-62 Identities = 102/117 (87%), Positives = 109/117 (93%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPLE+AWTFWFDN QGKS+ WGS+I PIHTFSTVEDFWSLYNNIHHPSKL VGADFHC Sbjct: 52 HPLEHAWTFWFDNPQGKSKQATWGSSIRPIHTFSTVEDFWSLYNNIHHPSKLVVGADFHC 111 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 FK+KIEPKWEDPICANGGKWT SCG+GKSDT WLHTLLA+IGEQFD+GDEICGAVVS Sbjct: 112 FKNKIEPKWEDPICANGGKWTFSCGRGKSDTMWLHTLLAMIGEQFDYGDEICGAVVS 168
>IF4E1_MAIZE (O81481) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) Length = 218 Score = 233 bits (595), Expect = 2e-61 Identities = 107/159 (67%), Positives = 119/159 (74%), Gaps = 3/159 (1%) Frame = +2 Query: 107 MAEDTETRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XHPLENAWTFWFDNSQGKS 277 MAE+T+TRP HPLE++WTFWFDN Q KS Sbjct: 1 MAEETDTRPASAGSRGRPAPEDDDREEGEITDLACAPSPPATHPLEHSWTFWFDNPQSKS 60 Query: 278 RAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHCFKDKIEPKWEDPICANGG 457 + AWGS+I PIHTFSTVE+FW LYNNI+HPSKL VGADFHCFK+KIEPKWEDPICANGG Sbjct: 61 KQAAWGSSIRPIHTFSTVEEFWGLYNNINHPSKLIVGADFHCFKNKIEPKWEDPICANGG 120 Query: 458 KWTISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 KWTISCG+GKSDTFWLHTLLA+IGEQFD+GDEICGAVVS Sbjct: 121 KWTISCGRGKSDTFWLHTLLAMIGEQFDYGDEICGAVVS 159
>IF4E1_ARATH (O23252) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) Length = 235 Score = 193 bits (491), Expect = 3e-49 Identities = 85/117 (72%), Positives = 99/117 (84%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPLE++WTFWFDN KS+ +WGS++ P+ TFSTVE+FWSLYNN+ HPSKL GADF+C Sbjct: 60 HPLEHSWTFWFDNPAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADFYC 119 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 FK IEPKWEDPICANGGKWT++ K KSD WL+TLLALIGEQFD GDEICGAVV+ Sbjct: 120 FKHIIEPKWEDPICANGGKWTMTFPKEKSDKSWLYTLLALIGEQFDHGDEICGAVVN 176
>IF4E5_ARATH (Q9C7P2) Putative eukaryotic translation initiation factor 4E-5| (eIF4E type 5) (eIF-4E type 5) (mRNA cap-binding protein type 5) Length = 240 Score = 176 bits (446), Expect = 4e-44 Identities = 74/117 (63%), Positives = 94/117 (80%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 H +N+WTFWFDN KS V WGS++ ++TF+T+E+FWSLYNNIH P+K G+D +C Sbjct: 65 HCFQNSWTFWFDNPSSKSNQVIWGSSLRSLYTFATIEEFWSLYNNIHPPTKWVSGSDLYC 124 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 FKDKIEPKWEDPICANGGKWT+ + ++ WL+TLLAL+GEQFD GDEICGAV++ Sbjct: 125 FKDKIEPKWEDPICANGGKWTMFFPRATLESNWLNTLLALVGEQFDQGDEICGAVLN 181
>IF4E4_ARATH (Q9C7P6) Putative eukaryotic translation initiation factor 4E-4| (eIF4E type 4) (eIF-4E type 4) (mRNA cap-binding protein type 4) Length = 240 Score = 176 bits (446), Expect = 4e-44 Identities = 75/117 (64%), Positives = 92/117 (78%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 H +N+WTFWFDN KS V WGS++ ++TF T+E+FWSLYNNIH P+K GAD +C Sbjct: 65 HCFQNSWTFWFDNPSSKSNQVIWGSSLRSLYTFGTIEEFWSLYNNIHPPTKWVSGADLYC 124 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 FKDKIEPKWEDPICANGGKW++ K + WL+TLLAL+GEQFD GDEICGAV++ Sbjct: 125 FKDKIEPKWEDPICANGGKWSMMFPKATLECNWLNTLLALVGEQFDQGDEICGAVLN 181
>IF4E2_MAIZE (O81482) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) Length = 216 Score = 148 bits (374), Expect = 9e-36 Identities = 65/118 (55%), Positives = 80/118 (67%), Gaps = 1/118 (0%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 H L WTFW+D AWG+++ +TF TVE+FWS+Y+ I PSKL+ ADFH Sbjct: 40 HKLHRQWTFWYDIQTKTKSGAAWGTSLKKAYTFDTVEEFWSMYDQIFRPSKLSGNADFHL 99 Query: 404 FKDKIEPKWEDPICANGGKWTISCG-KGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 FK +EPKWEDP CANGGKWT+ C K +T WL TL+ALIGEQFD ++ICG V S Sbjct: 100 FKAGVEPKWEDPECANGGKWTVPCNRKATFETMWLETLMALIGEQFDETEDICGIVAS 157
>IF4E2_ORYSA (P48600) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) Length = 206 Score = 147 bits (370), Expect = 3e-35 Identities = 64/118 (54%), Positives = 77/118 (65%), Gaps = 1/118 (0%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 H L W FW+D AWG+++ +TF TVE+FW LY+ I PSK+ V ADFH Sbjct: 30 HKLHRQWAFWYDIQSKPKPGAAWGTSLRKAYTFDTVEEFWGLYDQIFRPSKVTVNADFHL 89 Query: 404 FKDKIEPKWEDPICANGGKWTISCG-KGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 FK +EPKWEDP CANGGKWT+ C K + WL TL+ALIGEQFD +EICG V S Sbjct: 90 FKAGVEPKWEDPECANGGKWTVPCSRKTTLENMWLETLMALIGEQFDESEEICGVVAS 147
>IF4E2_WHEAT (Q03389) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) Length = 209 Score = 143 bits (361), Expect = 3e-34 Identities = 67/118 (56%), Positives = 77/118 (65%), Gaps = 1/118 (0%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 H L+ WTFW+D AWG+++ +TF TVE+FW LY+ I PSKL ADFH Sbjct: 33 HKLQRQWTFWYDIQTKPKPGAAWGTSLKKGYTFDTVEEFWCLYDQIFRPSKLVGSADFHL 92 Query: 404 FKDKIEPKWEDPICANGGKWT-ISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 FK +EPKWEDP CANGGKWT IS K DT WL T +ALIGEQFD EICG V S Sbjct: 93 FKAGVEPKWEDPECANGGKWTVISSRKTNLDTMWLETCMALIGEQFDESQEICGVVAS 150
>IF4E2_ARATH (O04663) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) (eIF4Eiso protein) (eIF(iso)4E) Length = 198 Score = 138 bits (348), Expect = 1e-32 Identities = 66/120 (55%), Positives = 76/120 (63%), Gaps = 3/120 (2%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 H LE W+FWFDN K AWG+++ +TF TVEDFW L+ I SKL A+ H Sbjct: 26 HKLERKWSFWFDNQSKKG--AAWGASLRKAYTFDTVEDFWGLHETIFQTSKLTANAEIHL 83 Query: 404 FKDKIEPKWEDPICANGGKWT---ISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 FK +EPKWEDP CANGGKWT + K D WL TL+ALIGEQFD DEICG V S Sbjct: 84 FKAGVEPKWEDPECANGGKWTWVVTANRKEALDKGWLETLMALIGEQFDEADEICGVVAS 143
>IF4E_DROME (P48598) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 259 Score = 119 bits (299), Expect = 5e-27 Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 4/121 (3%) Frame = +2 Query: 224 HPLENAWTFWF-DNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFH 400 HPL N WT W+ +N + KS W + I +F TVEDFWSLYN+I PS++ +G+D+ Sbjct: 81 HPLMNVWTLWYLENDRSKS----WEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYS 136 Query: 401 CFKDKIEPKWEDPICANGGKWTISCGKGKS---DTFWLHTLLALIGEQFDFGDEICGAVV 571 FK I P WED GG+W I+ K D WL LL LIGE FD D+ICGAV+ Sbjct: 137 LFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVI 196 Query: 572 S 574 + Sbjct: 197 N 197
>IF4E_BOVIN (Q9N0T5) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) Length = 217 Score = 117 bits (294), Expect = 2e-26 Identities = 58/122 (47%), Positives = 73/122 (59%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL+N W WF + ++ W + + I F TVEDFW+LYN+I S L G D+ Sbjct: 37 HPLQNRWALWFFKND---KSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSL 93 Query: 404 FKDKIEPKWEDPICANGGKWTISCGK----GKSDTFWLHTLLALIGEQF-DFGDEICGAV 568 FKD IEP WED GG+W I+ K G D FWL TLL LIGE F D+ D++CGAV Sbjct: 94 FKDGIEPMWEDEKNKRGGRWLITLNKQQRRGDLDRFWLETLLCLIGESFDDYSDDVCGAV 153 Query: 569 VS 574 V+ Sbjct: 154 VN 155
>IF4E_RAT (P63074) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 217 Score = 115 bits (289), Expect = 7e-26 Identities = 57/122 (46%), Positives = 73/122 (59%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL+N W WF + ++ W + + I F TVEDFW+LYN+I S L G D+ Sbjct: 37 HPLQNRWALWFFKND---KSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSL 93 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQF-DFGDEICGAV 568 FKD IEP WED GG+W I+ K + D FWL TLL LIGE F D+ D++CGAV Sbjct: 94 FKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAV 153 Query: 569 VS 574 V+ Sbjct: 154 VN 155
>IF4E_RABIT (P29338) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 217 Score = 115 bits (289), Expect = 7e-26 Identities = 57/122 (46%), Positives = 73/122 (59%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL+N W WF + ++ W + + I F TVEDFW+LYN+I S L G D+ Sbjct: 37 HPLQNRWALWFFKND---KSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSL 93 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQF-DFGDEICGAV 568 FKD IEP WED GG+W I+ K + D FWL TLL LIGE F D+ D++CGAV Sbjct: 94 FKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAV 153 Query: 569 VS 574 V+ Sbjct: 154 VN 155
>IF4E_MOUSE (P63073) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 217 Score = 115 bits (289), Expect = 7e-26 Identities = 57/122 (46%), Positives = 73/122 (59%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL+N W WF + ++ W + + I F TVEDFW+LYN+I S L G D+ Sbjct: 37 HPLQNRWALWFFKND---KSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSL 93 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQF-DFGDEICGAV 568 FKD IEP WED GG+W I+ K + D FWL TLL LIGE F D+ D++CGAV Sbjct: 94 FKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAV 153 Query: 569 VS 574 V+ Sbjct: 154 VN 155
>IF4E_HUMAN (P06730) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 217 Score = 115 bits (289), Expect = 7e-26 Identities = 57/122 (46%), Positives = 73/122 (59%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL+N W WF + ++ W + + I F TVEDFW+LYN+I S L G D+ Sbjct: 37 HPLQNRWALWFFKND---KSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSL 93 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQF-DFGDEICGAV 568 FKD IEP WED GG+W I+ K + D FWL TLL LIGE F D+ D++CGAV Sbjct: 94 FKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAV 153 Query: 569 VS 574 V+ Sbjct: 154 VN 155
>IF4E_XENLA (P48597) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 213 Score = 113 bits (283), Expect = 3e-25 Identities = 56/122 (45%), Positives = 72/122 (59%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL+N W WF + ++ W + + I F TVEDFW+LYN+I S L G D+ Sbjct: 33 HPLQNRWALWFFKND---KSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMSGCDYSL 89 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQFD-FGDEICGAV 568 FKD IEP WED GG+W I+ K + D FWL TL+ LIGE FD D++CGAV Sbjct: 90 FKDGIEPMWEDEKNKRGGRWLITLNKQQRRNDLDRFWLETLMCLIGESFDEHSDDVCGAV 149 Query: 569 VS 574 V+ Sbjct: 150 VN 151
>IF4EA_BRARE (Q9DFS6) Eukaryotic translation initiation factor 4E-1A (eIF4E-1A)| (mRNA cap-binding protein) Length = 215 Score = 113 bits (283), Expect = 3e-25 Identities = 56/122 (45%), Positives = 72/122 (59%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL+N W WF + ++ W + + I F TVEDFW+LYN+I S L G D+ Sbjct: 35 HPLQNRWALWFFKND---KSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMSGCDYSL 91 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQF-DFGDEICGAV 568 FKD IEP WED GG+W I+ K + D FWL TLL L+GE F D D++CGAV Sbjct: 92 FKDGIEPMWEDERNKRGGRWLITLSKQQRRADLDRFWLETLLCLVGEAFDDHSDDVCGAV 151 Query: 569 VS 574 V+ Sbjct: 152 VN 153
>IF4EB_BRARE (Q9PW28) Eukaryotic translation initiation factor 4E-1B (eIF4E-1B)| (eIF4E) Length = 214 Score = 113 bits (283), Expect = 3e-25 Identities = 58/122 (47%), Positives = 72/122 (59%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL+N W WF + ++ W + I F TVEDFW LYNNI PSKL+ G D+ Sbjct: 34 HPLQNRWGLWFYKND---KSKMWQDNLRLITKFDTVEDFWGLYNNIQLPSKLSSGCDYSM 90 Query: 404 FKDKIEPKWEDPICANGGKWTISCGK----GKSDTFWLHTLLALIGEQF-DFGDEICGAV 568 FKD IEP WED GG+W I+ K + D FWL TLL LIGE F F +ICG+V Sbjct: 91 FKDGIEPMWEDRSNKCGGRWLITLAKQHRHTELDHFWLETLLCLIGEGFSSFSRDICGSV 150 Query: 569 VS 574 ++ Sbjct: 151 IN 152
>IF4E3_CAEEL (O61955) Eukaryotic translation initiation factor 4E-3 (eIF4E-3)| (eIF-4E-3) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 248 Score = 110 bits (276), Expect = 2e-24 Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL+N W W+ + R W + + F TVEDFWSLYN+I LN G+D++ Sbjct: 32 HPLQNRWALWYLKAD---RNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYL 88 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQFD-FGDEICGAV 568 FK+ I+P WED GG+W + K + D +WL L+A++GEQFD +GD ICGAV Sbjct: 89 FKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAV 148 Query: 569 VS 574 V+ Sbjct: 149 VN 150
>IF4E_APLCA (O77210) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 215 Score = 110 bits (274), Expect = 4e-24 Identities = 59/122 (48%), Positives = 71/122 (58%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL+N+W WF + KSR W + I TF TVEDFW LYN+ SKL G D+ Sbjct: 35 HPLQNSWAMWFFKND-KSRD--WKDNLRVITTFDTVEDFWGLYNHTLPASKLQSGCDYSV 91 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQFD-FGDEICGAV 568 FK I+P WED GG+W I+ K + D FWL TLL LIGE FD +EICGA Sbjct: 92 FKAGIQPMWEDAQNKKGGRWLINLNKTQRQTHLDDFWLETLLCLIGEGFDEHSEEICGAT 151 Query: 569 VS 574 V+ Sbjct: 152 VN 153
>IF4E3_MOUSE (Q8BMB3) Eukaryotic translation initiation factor 4E type 3 (eIF4E| type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Eukaryotic translation initiation factor 4E-like 3) (eIF4E-like protein 4E-LP) Length = 245 Score = 108 bits (269), Expect = 1e-23 Identities = 52/119 (43%), Positives = 75/119 (63%), Gaps = 2/119 (1%) Frame = +2 Query: 224 HPLENAWTFWFDN-SQGK-SRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADF 397 HPL+ +TFW+ + G+ + + ++ I I TF++VE FW Y+++ P L +DF Sbjct: 54 HPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWKFYSHMVRPGDLTGHSDF 113 Query: 398 HCFKDKIEPKWEDPICANGGKWTISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 H FK+ I+P WED NGGKW I KG + W + +LA++GEQF G+EICGAVVS Sbjct: 114 HLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVS 172
>IF4E3_HUMAN (O60573) Eukaryotic translation initiation factor 4E type 3 (eIF4E| type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Eukaryotic translation initiation factor 4E-like 3) (Eukaryotic translation initiation factor 4E homologous protein) Length = 245 Score = 107 bits (268), Expect = 2e-23 Identities = 52/119 (43%), Positives = 75/119 (63%), Gaps = 2/119 (1%) Frame = +2 Query: 224 HPLENAWTFWFDN-SQGK-SRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADF 397 HPL+ +TFW+ + G+ + + ++ I I TF++VE FW Y+++ P L +DF Sbjct: 54 HPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDF 113 Query: 398 HCFKDKIEPKWEDPICANGGKWTISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 H FK+ I+P WED NGGKW I KG + W + +LA++GEQF G+EICGAVVS Sbjct: 114 HLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVS 172
>IF4E1_CAEEL (O45551) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 212 Score = 105 bits (263), Expect = 7e-23 Identities = 51/120 (42%), Positives = 74/120 (61%), Gaps = 5/120 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 +PL+ WT+W+ N + R +W + ++TF+TV +FW+LY+ I PS LN D++ Sbjct: 12 YPLKRNWTWWYLNDE---RNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNV 68 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQFDFG-DEICGAV 568 F+D I+P WE P +NGG+W I KGK+ D WL L+AL+GEQF + ICG V Sbjct: 69 FRDDIQPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLV 128
>IF4E_YEAST (P07260) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 213 Score = 103 bits (256), Expect = 5e-22 Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 3/120 (2%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL WT W+ ++ +W + P+ +F TVE+FW++ NI P +L + +D+H Sbjct: 37 HPLNTKWTLWY-TKPAVDKSESWSDLLRPVTSFQTVEEFWAIIQNIPEPHELPLKSDYHV 95 Query: 404 FKDKIEPKWEDPICANGGKWTISC-GKGKS-DTFWLHTLLALIGEQFDFGD-EICGAVVS 574 F++ + P+WED A GGKW+ GKG D WL TLLA+IGE D D +I G V+S Sbjct: 96 FRNDVRPEWEDEANAKGGKWSFQLRGKGADIDELWLRTLLAVIGETIDEDDSQINGVVLS 155
>IF4E5_CAEEL (P56570) Eukaryotic translation initiation factor 4E-5 (eIF4E-5)| (eIF-4E-5) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 240 Score = 101 bits (252), Expect = 1e-21 Identities = 52/120 (43%), Positives = 71/120 (59%), Gaps = 5/120 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 +PL+ W++WF N R +W + ++TF+TV +FW+ Y I PS LN D++ Sbjct: 48 YPLQRNWSWWFLNDD---RNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNV 104 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQFDFG-DEICGAV 568 F+D I+PKWE P +GG+W I KGK+ D WL LLALIGEQF + ICG V Sbjct: 105 FRDDIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLV 164
>IF4E_CANGA (Q9P974) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 209 Score = 99.8 bits (247), Expect = 5e-21 Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 2/118 (1%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL WT W+ ++ +W + P+ +F +VE+FW++ NI P +L + +D+H Sbjct: 33 HPLNTKWTLWY-TKPAVDKSESWSDLLRPVTSFQSVEEFWAIVQNIPEPHELPLKSDYHV 91 Query: 404 FKDKIEPKWEDPICANGGKWTISC-GKG-KSDTFWLHTLLALIGEQFDFGDEICGAVV 571 F++ I P+WED A GGKW+ G+G + D WL TLLA+IGE D D VV Sbjct: 92 FRNDIRPEWEDSANAKGGKWSFQVRGRGAEIDELWLRTLLAVIGETIDEEDSQINGVV 149
>IF4E2_CAEEL (Q21693) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 228 Score = 99.4 bits (246), Expect = 7e-21 Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 + L+ WT+W+ N + R +W + + TFS+V +FW+L+++I PS LN +D++ Sbjct: 17 YKLKRNWTWWYLNDE---RNKSWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDYNV 73 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQF-DFGDEICGAV 568 F+D IEP WE P NGG+W I+ KG++ DT W L+A+IGEQF D + +CG V Sbjct: 74 FRDGIEPMWEVPQNQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCGIV 133
>IF4E4_CAEEL (Q22888) Eukaryotic translation initiation factor 4E-4 (eIF4E-4)| (eIF-4E-4) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 212 Score = 99.4 bits (246), Expect = 7e-21 Identities = 49/118 (41%), Positives = 68/118 (57%), Gaps = 1/118 (0%) Frame = +2 Query: 224 HPLENAWTF-WFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFH 400 H L+ ++TF +F GK + S + P+ +VE FWS+ + P+++ AD H Sbjct: 31 HQLQYSYTFSYFMRPTGKFDPEDYASYVQPVGIMKSVEQFWSIMVHFKRPTEMCDKADIH 90 Query: 401 CFKDKIEPKWEDPICANGGKWTISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 FK ++P WEDP GGKW I KG S W + L+A+IGEQF GDE+CGAV S Sbjct: 91 FFKTGVKPVWEDPANCKGGKWIIRLKKGLSTRIWENLLMAIIGEQFLVGDELCGAVCS 148
>IF4E3_ARATH (Q9FK59) Eukaryotic translation initiation factor 4E type 3 (eIF4E| type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Novel cap-binding protein) (nCBP) Length = 221 Score = 97.1 bits (240), Expect = 3e-20 Identities = 50/117 (42%), Positives = 62/117 (52%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL ++ W+ R ++ I + FSTVE FW+ Y ++ S L D H Sbjct: 43 HPLRYKFSIWYTRRTPGVRNQSYEDNIKKMVEFSTVEGFWACYCHLARSSLLPSPTDLHF 102 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKSDTFWLHTLLALIGEQFDFGDEICGAVVS 574 FKD I P WED NGGKW I K S FW LLAL+G+Q D D ICGAV+S Sbjct: 103 FKDGIRPLWEDGANCNGGKWIIRFSKVVSARFWEDLLLALVGDQLDDADNICGAVLS 159
>IF4E_CANAL (Q9P975) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 209 Score = 95.9 bits (237), Expect = 7e-20 Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 6/123 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL + WT W+ Q +++ W + P+ TFS+VE+FW +YN+I ++L + +D+H Sbjct: 30 HPLNSRWTLWYTKPQ-TNKSENWHDLLKPVITFSSVEEFWGIYNSIPPANQLPLKSDYHL 88 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS-----DTFWLHTLLALIGEQF-DFGDEICGA 565 FK+ I P+WED + GGKW S K + WL LLA+IGE D +E+ G Sbjct: 89 FKEGIRPEWEDEANSKGGKWQFSFNKKSEVNPIINDLWLRGLLAVIGETIEDEENEVNGI 148 Query: 566 VVS 574 V++ Sbjct: 149 VLN 151
>IF4E_ASHGO (Q75AV8) Eukaryotic translation initiation factor 4E (eIF4E)| (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 211 Score = 92.4 bits (228), Expect = 8e-19 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 3/120 (2%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL + WT W+ +W + P+ +F+TVE+FW++ N I P +L + +D+H Sbjct: 35 HPLNSKWTLWYTKPPVGDNE-SWSDLLRPVTSFTTVEEFWAIQNAIPKPRELPLKSDYHL 93 Query: 404 FKDKIEPKWEDPICANGGKWT--ISCGKGKSDTFWLHTLLALIGEQFDFGD-EICGAVVS 574 F++ I P+WED + GGKW+ D WL LLA+IGE D + EI G V++ Sbjct: 94 FRNDIRPEWEDEANSRGGKWSFQFKVRNPPIDDLWLRALLAVIGESIDEDEFEINGVVIN 153
>IF4E1_SCHPO (P78954) Eukaryotic translation initiation factor 4E-1 (eIF4E-1)| (eIF-4E-1) (mRNA cap-binding protein 1) (eIF-4F 25 kDa subunit 1) Length = 218 Score = 89.0 bits (219), Expect = 9e-18 Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 5/122 (4%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL WT WF + + W I TF++VE+FW ++NNI+ S L + +D+ Sbjct: 38 HPLARPWTLWF--LMPPTPGLEWNELQKNIITFNSVEEFWGIHNNINPASSLPIKSDYSF 95 Query: 404 FKDKIEPKWEDPICANGGKWTISCGKGKS----DTFWLHTLLALIGEQFD-FGDEICGAV 568 F++ + P+WED GGKW KG+ D WL T+LA IGE D G E+ G V Sbjct: 96 FREGVRPEWEDVHNKTGGKWAFQ-NKGRGGNALDEMWLTTVLAAIGETLDPTGQEVMGVV 154 Query: 569 VS 574 ++ Sbjct: 155 IN 156
>IF4E2_SCHPO (O74743) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)| (eIF-4E-2) (mRNA cap-binding protein 2) (eIF-4F 25 kDa subunit 2) Length = 243 Score = 88.6 bits (218), Expect = 1e-17 Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 3/118 (2%) Frame = +2 Query: 224 HPLENAWTFWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVGADFHC 403 HPL++ WT WF + ++ + W + I +F TVE+FW ++ I S L +D+ Sbjct: 64 HPLQHEWTLWF--LKPPTQGLEWSDLLKEIISFKTVEEFWGIFKTISKASMLPAKSDYSY 121 Query: 404 FKDKIEPKWEDPICANGGKWTI-SCGKGKS-DTFWLHTLLALIGEQFD-FGDEICGAV 568 F I P+WEDP NGGKW S KG + D WL+ +LA IGE D G E+ G V Sbjct: 122 FLKGIRPEWEDPQNMNGGKWAYQSKHKGSNLDELWLYMVLAAIGETLDPTGKEVTGVV 179
>IF4EH_MIMIV (Q5UQG4) Eukaryotic translation initiation factor 4E homolog| (eIF4E) (eIF-4E) (mRNA cap-binding protein) Length = 272 Score = 38.1 bits (87), Expect = 0.018 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +2 Query: 356 NIHHPSKLNVGA-DFHCFKDKIEPKWEDPICANGGKWTISCGKGKSDTFWLHTLLALIGE 532 ++ K+N+ A D+ + IEP WEDP +NGG +T+ K W + ++GE Sbjct: 83 SVETDGKINLDANDYIIMRKGIEPIWEDPRNSNGGTFTVKMDHSKGYDVWKIFIQYILGE 142
>BT2A3_HUMAN (Q96KV6) Butyrophilin subfamily 2 member A3 precursor| Length = 567 Score = 31.2 bits (69), Expect = 2.2 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +2 Query: 407 KDKIEPKWEDPICANGGKWTISCGKGKSDTFWLHTLLALI 526 +D +E KWE P+ G WT+ K K +W T L I Sbjct: 353 RDNVERKWEVPLLPQNGFWTLEMHKRK---YWALTSLKWI 389
>PAC1_YEAST (P39946) Protein PAC1 (LIS-1 homolog)| Length = 494 Score = 30.4 bits (67), Expect = 3.7 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 525 INASKVCNQNVSDFPLPQLMVHLPPLAQMGSSHFGSILSLK 403 ++AS+ + + PLP LM H P+ S+F +L+LK Sbjct: 374 VSASRDRTIKIWEIPLPTLMAHRAPIPNPTDSNFRCVLTLK 414
>GABT_ECOLI (P22256) 4-aminobutyrate aminotransferase (EC 2.6.1.19)| ((S)-3-amino-2-methylpropionate transaminase) (EC 2.6.1.22) (Gamma-amino-N-butyrate transaminase) (GABA transaminase) (Glutamate:succinic semialdehyde transaminase) (GABA aminotransferase Length = 426 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +2 Query: 2 DLTTTAAAVASSHPLAPPVRRRKGQDFIAAGGAAG 106 DLTT A ++A PLA R + D +A GG G Sbjct: 262 DLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGG 296
>VL1_COPV (Q89828) Major capsid protein L1| Length = 503 Score = 30.0 bits (66), Expect = 4.9 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +2 Query: 248 FWFDNSQGKSRAVAWGSTIHPIHTFSTVEDFWSLYNNIHHPSKLNVG 388 +W SQGK+ +AWG+ + F TV D N P +N+G Sbjct: 313 YWIQRSQGKNNGIAWGNQL-----FLTVVD-----NTRGTPLTINIG 349 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,480,275 Number of Sequences: 219361 Number of extensions: 1112879 Number of successful extensions: 3988 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3820 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3932 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
