Clone Information

BLAST Search Result

Clone Name	bart41a02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit...	255	7e-68
2	PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulator...	214	2e-55
3	PSD6_MOUSE (Q99JI4) 26S proteasome non-ATPase regulatory subunit...	135	6e-32
4	PSD6_HUMAN (Q15008) 26S proteasome non-ATPase regulatory subunit...	133	3e-31
5	PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit...	118	1e-26
6	PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit...	112	9e-25
7	RPN7_SCHPO (Q10335) Probable 26S proteasome regulatory subunit rpn7	69	7e-12
8	RPN7_YEAST (Q06103) 26S proteasome regulatory subunit RPN7	55	1e-07
9	MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle II...	39	0.013
10	RAD50_PYRKO (Q5JHN1) DNA double-strand break repair rad50 ATPase	37	0.038
11	AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor	37	0.050
12	RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase	34	0.25
13	CLPE_STRPN (P35594) ATP-dependent Clp protease ATP-binding subun...	34	0.25
14	MRCKB_RAT (Q7TT49) Serine/threonine-protein kinase MRCK beta (EC...	34	0.32
15	IF2P_SCHPO (Q10251) Eukaryotic translation initiation factor 5B ...	34	0.32
16	MRCKB_MOUSE (Q7TT50) Serine/threonine-protein kinase MRCK beta (...	33	0.42
17	YHES_ECOLI (P63389) Hypothetical ABC transporter ATP-binding pro...	33	0.72
18	YHES_ECO57 (P63390) Hypothetical ABC transporter ATP-binding pro...	33	0.72
19	ATG20_CANGA (Q6FR93) Autophagy-related protein 20	33	0.72
20	MUTS2_CLOAB (Q97GM6) MutS2 protein	32	0.94
21	ATPF_SYNP6 (P08447) ATP synthase B chain (EC 3.6.3.14) (Subunit I)	32	1.2
22	RAD50_AERPE (Q9YFZ1) DNA double-strand break repair rad50 ATPase	32	1.6
23	SMCA4_HUMAN (P51532) Probable global transcription activator SNF...	31	2.1
24	POTA_MYCPN (P75059) Spermidine/putrescine import ATP-binding pro...	31	2.1
25	TPM_CHAFE (Q9N2R3) Tropomyosin (Allergen Cha f 1) (Cha f I) (Fra...	31	2.7
26	BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B a...	30	3.6
27	ORC2_MOUSE (Q60862) Origin recognition complex subunit 2	30	3.6
28	POTA_MYCGE (P47288) Spermidine/putrescine import ATP-binding pro...	30	3.6
29	ZN365_RAT (Q5PQS2) Protein ZNF365	30	3.6
30	MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle II...	30	3.6
31	YGCJ_ECOLI (Q46899) Hypothetical protein ygcJ	30	3.6
32	SYTM_ARATH (O04630) Threonyl-tRNA synthetase, mitochondrial prec...	30	3.6
33	SYCP1_HUMAN (Q15431) Synaptonemal complex protein 1 (SCP-1)	30	3.6
34	TPM_HOMAM (O44119) Tropomyosin (Allergen Hom a 1)	30	4.6
35	IFB2_CAEEL (Q19286) Intermediate filament protein ifb-2 (Interme...	30	4.6
36	SLAP_BACCI (P35824) S-layer-related protein precursor	30	4.6
37	NPS12_ARATH (Q9LNH6) Novel plant SNARE 12 (AtNPSN12)	30	4.6
38	BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)	30	4.6
39	YKQ9_CAEEL (P34304) Hypothetical protein C06E1.9	30	4.6
40	IF3A_CAEEL (P34339) Probable eukaryotic translation initiation f...	30	4.6
41	GUN_BACS1 (P06564) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,...	30	4.6
42	SYV_METCA (Q606C1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	30	6.1
43	BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	30	6.1
44	GAS7_RAT (O55148) Growth-arrest-specific protein 7 (GAS-7)	30	6.1
45	YKI5_CAEEL (P46012) Hypothetical protein C01G6.5	29	7.9
46	HBHA_MYCTU (P0A5P6) Heparin-binding hemagglutinin (Adhesin)	29	7.9
47	HBHA_MYCBO (P0A5P7) Heparin-binding hemagglutinin (Adhesin)	29	7.9
48	PFDA_PYRFU (Q8U3T0) Prefoldin alpha subunit (GimC alpha subunit)	29	7.9

>PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit 6 (26S|
           proteasome regulatory particle non-ATPase subunit 7)
           (OsRPN7)
          Length = 389

 Score =  255 bits (651), Expect = 7e-68
 Identities = 130/147 (88%), Positives = 140/147 (95%)
 Frame = +1

Query: 118 SHPDVDDLSKVDIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKL 297
           SHPDVDDL+KVD+R+DVL+AVKSDDMA L+ESL A GVLE DAALLAEMR RI+EEIRKL
Sbjct: 25  SHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLETDAALLAEMRGRIEEEIRKL 84

Query: 298 DEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYT 477
           DEKIADAEENLGESEVREAHLAKSLYF++VGEKEKALEQLKVTEGKTVA+GQKMDLVF+T
Sbjct: 85  DEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTVAVGQKMDLVFHT 144

Query: 478 LQIGLFYMDFDLISXSIDKAKKLFEEG 558
           LQIG FYMDFDLIS SIDKAKKLFEEG
Sbjct: 145 LQIGFFYMDFDLISKSIDKAKKLFEEG 171

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>PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulatory subunit 6|
          Length = 387

 Score =  214 bits (544), Expect = 2e-55
 Identities = 103/147 (70%), Positives = 128/147 (87%)
 Frame = +1

Query: 118 SHPDVDDLSKVDIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKL 297
           +HPDV D+ KV ++S+VL  ++S  MAPL+E+L A+ VL+ D +LL  MRA  +EE++KL
Sbjct: 23  THPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDLDQSLLESMRAANEEELKKL 82

Query: 298 DEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYT 477
           DEKIADAEENLGESEVREAHLAK+LYF+++ +KEKALEQLK+TEGKTVA+GQKMD+VFYT
Sbjct: 83  DEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLKLTEGKTVAVGQKMDVVFYT 142

Query: 478 LQIGLFYMDFDLISXSIDKAKKLFEEG 558
           LQ+  FYMDFDL+S SIDKAKKLFEEG
Sbjct: 143 LQLAFFYMDFDLVSKSIDKAKKLFEEG 169

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>PSD6_MOUSE (Q99JI4) 26S proteasome non-ATPase regulatory subunit 6 (26S|
           proteasome regulatory subunit S10) (p42A)
          Length = 389

 Score =  135 bits (341), Expect = 6e-32
 Identities = 64/135 (47%), Positives = 102/135 (75%)
 Frame = +1

Query: 154 IRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLG 333
           +R ++++AV+ ++MAP +E+L  +   + D  LL++M+   +EE+++LDE++ DAE+NLG
Sbjct: 37  VREELMAAVRENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLG 96

Query: 334 ESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDL 513
           ESE+R+A +AK+ Y  ++G+KE AL   + T  KTVA+G ++D+VFY L+IGLFYMD DL
Sbjct: 97  ESEIRDAMMAKAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDL 156

Query: 514 ISXSIDKAKKLFEEG 558
           I+ + +KAK L EEG
Sbjct: 157 ITRNTEKAKSLIEEG 171

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>PSD6_HUMAN (Q15008) 26S proteasome non-ATPase regulatory subunit 6 (26S|
           proteasome regulatory subunit S10) (p42A) (Proteasome
           regulatory particle subunit p44S10) (Phosphonoformate
           immuno-associated protein 4) (Breast cancer-associated
           protein SGA-113M)
          Length = 389

 Score =  133 bits (335), Expect = 3e-31
 Identities = 63/135 (46%), Positives = 101/135 (74%)
 Frame = +1

Query: 154 IRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLG 333
           +R ++++AV+ ++MAP +E+L  +   + D  LL +M+   ++E+++LDE++ DAE+NLG
Sbjct: 37  VRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLG 96

Query: 334 ESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDL 513
           ESE+R+A +AK+ Y  ++G+KE AL   + T  KTVA+G ++D+VFY L+IGLFYMD DL
Sbjct: 97  ESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDL 156

Query: 514 ISXSIDKAKKLFEEG 558
           I+ + +KAK L EEG
Sbjct: 157 ITRNTEKAKSLIEEG 171

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>PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit 6 (26S|
           proteasome regulatory subunit S10) (Rpn7 protein)
          Length = 389

 Score =  118 bits (296), Expect = 1e-26
 Identities = 59/135 (43%), Positives = 92/135 (68%)
 Frame = +1

Query: 154 IRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLG 333
           +++ +L A+++++MAP +E + +      D  LLA M+     E+ +LD  I DAE+NLG
Sbjct: 37  LKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLARMKENNRVEVEQLDAAIEDAEKNLG 96

Query: 334 ESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDL 513
           E EVREA+L KS Y  ++G+K  A    + T  KTV++G ++D+VF+ +++GLFY+D DL
Sbjct: 97  EMEVREANLKKSEYLCRIGDKAAAETAFRKTYEKTVSLGHRLDIVFHLIRLGLFYLDHDL 156

Query: 514 ISXSIDKAKKLFEEG 558
           I+ +IDKAK L EEG
Sbjct: 157 ITRNIDKAKYLIEEG 171

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>PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit 6 (26S|
           proteasome regulatory subunit rpn-7)
          Length = 410

 Score =  112 bits (279), Expect = 9e-25
 Identities = 58/147 (39%), Positives = 92/147 (62%)
 Frame = +1

Query: 118 SHPDVDDLSKVDIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKL 297
           +HP+VD   K      +   +K  DMAP +E + A   +  DA  LA M+A   ++I ++
Sbjct: 39  NHPEVDSSVKEAKLEKLQETIKEFDMAPFYELVCADFKIVVDATQLAAMKAANQKKIDEI 98

Query: 298 DEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYT 477
             ++ DAE+NLGESEVR+  L K  Y+ ++G+K+ AL+    T  KTV +G ++D+VF  
Sbjct: 99  TAEVEDAEKNLGESEVRQGLLRKFEYYCQIGDKDNALKAYTATYEKTVGMGYRIDVVFAM 158

Query: 478 LQIGLFYMDFDLISXSIDKAKKLFEEG 558
           +++GLF++D  LI+  I KAK+L E+G
Sbjct: 159 IRVGLFFLDHHLINKFITKAKELMEQG 185

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>RPN7_SCHPO (Q10335) Probable 26S proteasome regulatory subunit rpn7|
          Length = 409

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 36/135 (26%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
 Frame = +1

Query: 166 VLSAVKSDDMAPLFESLA----ATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLG 333
           + SA++  D+APL++ L+     +  ++ D+  L  M  + +E++ + D+ I DA+E  G
Sbjct: 48  LFSAIRDHDLAPLYKYLSENPKTSASIDFDSNFLNSMIKKNEEKLAEFDKAIEDAQELNG 107

Query: 334 ESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDL 513
           E E+ EA   K+ Y+  + ++E+ ++    T  +    G K+D++F  +++   Y D  +
Sbjct: 108 EHEILEAMKNKADYYTNICDRERGVQLCDETFERATLTGMKIDVLFSKIRLAYVYADMRV 167

Query: 514 ISXSIDKAKKLFEEG 558
           +   ++K K L E+G
Sbjct: 168 VGQLLEKLKPLIEKG 182

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>RPN7_YEAST (Q06103) 26S proteasome regulatory subunit RPN7|
          Length = 429

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 21/152 (13%)
 Frame = +1

Query: 166 VLSAVKSDDMAPLFESLAATGVLEP--------------------DAALLAEMRARIDEE 285
           VL+ +K ++MAP ++ L    ++                      D  L  E+  + + +
Sbjct: 50  VLAKIKEEEMAPYYKYLCEEYLVNNGQSDLEHDEKSDSLNEWIKFDQELYNELCKKNESK 109

Query: 286 IRKLDEKIADAEEN-LGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMD 462
           I++L+EKI   EE+  GE E  +A +    Y+ ++G+K+ A + L  +  K ++ G K+D
Sbjct: 110 IKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKID 169

Query: 463 LVFYTLQIGLFYMDFDLISXSIDKAKKLFEEG 558
           ++    ++G FY D   +   ++    + E+G
Sbjct: 170 VMLTIARLGFFYNDQLYVKEKLEAVNSMIEKG 201

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>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle|
            myosin heavy chain IIc) (NMHC II-C)
          Length = 1995

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = +1

Query: 208  ESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVR--EAHLAKSLYFV 381
            +S    G L+   A L E RAR+ E++R   E  A+AEE  G    R  E  L  S    
Sbjct: 887  QSAREVGELQGRVAQLEEERARLAEQLRAEAELCAEAEETRGRLAARKQELELVVSELEA 946

Query: 382  KVGEKEKALEQLKVTEGK 435
            +VGE+E+   Q++ TE K
Sbjct: 947  RVGEEEECSRQMQ-TEKK 963



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 26/63 (41%), Positives = 32/63 (50%)
 Frame = +1

Query: 256  AEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGK 435
            A  RAR    I  L+ K+A AEE L E E RE  L+  L  V+  EK      L+V E +
Sbjct: 1823 AGARARHKMTIAALESKLAQAEEQL-EQETRERILSGKL--VRRAEKRLKEVVLQVEEER 1879

Query: 436  TVA 444
             VA
Sbjct: 1880 RVA 1882

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>RAD50_PYRKO (Q5JHN1) DNA double-strand break repair rad50 ATPase|
          Length = 883

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
 Frame = +1

Query: 130 VDDLSKVDIRSDVLSAVKSD---DMAPLFESLAATGVLEPDAALLAEMRARI---DEEIR 291
           +D+LSK + R   L   K     ++  L E L A    +   A L  ++ R+   +EEI 
Sbjct: 330 IDELSKKEARVKELLKEKEGLQKELGALEEDLKAYQRAKELMANLERLKKRLTLSEEEIE 389

Query: 292 KLDEKIADAEENLGE--SEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKM 459
           KL+ +I  A E   E   E+ E    +       GE+ KAL +LK  +G+    G+++
Sbjct: 390 KLEAEIQKARERKEEIMKELEEIGSRRGELKSIAGERNKALMELKKAKGRCPVCGREL 447

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>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 31/130 (23%), Positives = 43/130 (33%), Gaps = 6/130 (4%)
 Frame = -1

Query: 443 ATVFPSVTLSCSSAFSFSPTFTKYKDLARWASRTSLSPKFXXXXXXXXXXXXXXXXXXXX 264
           A++   VT + SS  S +PT T     +   S TS SP                      
Sbjct: 163 ASIISPVTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSS 222

Query: 263 XXXXXXXXXXXXXXXXSDSNSGAMSSDLTAESTSERMST------LERSSTSGWESRKSL 102
                           S S+S   +S  +  ++S   ST         SSTS   S KS 
Sbjct: 223 STSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKST 282

Query: 101 WASNRCFSCF 72
            AS+   S +
Sbjct: 283 SASSTSTSSY 292

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>RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase|
          Length = 882

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
 Frame = +1

Query: 208 ESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEEN-----LGESEVREAHLAKSL 372
           E L    +LE D  L  E++A+  E +R+L EK+ D         L E E ++  + +  
Sbjct: 355 EILNKLAILEKDHQLYEEIKAK-KENLRQLKEKLGDKSPEDIKKLLEELETKKTTIEEER 413

Query: 373 YFV---------KVGEKEKALEQLKVTEGKTVAIGQKM 459
             +         K+G+ + A+E+LK  +GK    G+++
Sbjct: 414 NEITQRIGELKNKIGDLKTAIEELKKAKGKCPVCGREL 451

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>CLPE_STRPN (P35594) ATP-dependent Clp protease ATP-binding subunit clpE|
           (Exported protein 4)
          Length = 752

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
 Frame = +1

Query: 238 PDAA--LLAEMRARIDEEIRKLDEKIADAE----ENLGESEVREAHLAKSLYFVKVGEKE 399
           PD A  LL E  ++++  +  +D K+ D      ENL     RE    K+ YF     K 
Sbjct: 338 PDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKSQATREEDFEKAAYFRDQIAKY 397

Query: 400 KALEQLKVTEGKTVAIGQK 456
           K +++ K+T+  T +I +K
Sbjct: 398 KEMQKKKITDQDTPSISEK 416

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>MRCKB_RAT (Q7TT49) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)|
            (CDC42-binding protein kinase beta) (Myotonic dystrophy
            kinase-related CDC42-binding kinase beta) (Myotonic
            dystrophy protein kinase-like beta) (MRCK beta)
            (DMPK-like beta)
          Length = 1713

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
 Frame = +1

Query: 172  SAVKSDDMAPLF-----ESLAATGVLEPDAALLAEMRAR--IDEEIRKLDEKIADAEENL 330
            S++ S  + PL+     + L  +  LE  +AL AE+RA+  + EE+RK+ +     E  L
Sbjct: 852  SSLGSRTLDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVHEELRKVKDTSLAFESKL 911

Query: 331  GESEVREAHLAKSLYFVKVGEKEK 402
             ESE +   L + +  +K   +EK
Sbjct: 912  KESEAKNRELLEEMQSLKKRMEEK 935

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>IF2P_SCHPO (Q10251) Eukaryotic translation initiation factor 5B (eIF-5B)|
           (Translation initiation factor IF-2)
          Length = 1079

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
 Frame = +1

Query: 133 DDLSKVDIRSDV-LSAVKSDDMAPLFESLAATGVLEPDAA----LLAEMRARIDEEIRKL 297
           D L+  ++ S+V +S    +D +   +  A +    P+      +L E RAR +EE R  
Sbjct: 209 DTLASSEVSSEVDISTPAENDSSAKGKQAAGSKRKGPNVTALQKMLEEKRAREEEEQRIR 268

Query: 298 DEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQK 456
           +E+   AEE    +EV EA   K    +K  EKE+  ++    +GK ++  QK
Sbjct: 269 EEEARIAEEEKRLAEVEEAR--KEEARLKKKEKERKKKEEMKAQGKYLSKKQK 319

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>MRCKB_MOUSE (Q7TT50) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)|
            (CDC42-binding protein kinase beta) (Myotonic dystrophy
            kinase-related CDC42-binding kinase beta) (Myotonic
            dystrophy protein kinase-like beta) (MRCK beta)
            (DMPK-like beta)
          Length = 1713

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
 Frame = +1

Query: 172  SAVKSDDMAPLF-----ESLAATGVLEPDAALLAEMRAR--IDEEIRKLDEKIADAEENL 330
            S++ S  + PL+     + L  +  LE  +AL AE+RA+  + EE+RK+ +     E  L
Sbjct: 852  SSLGSRTLDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVQEELRKVKDSSLAFESKL 911

Query: 331  GESEVREAHLAKSLYFVKVGEKEK 402
             ESE +   L + +  ++   +EK
Sbjct: 912  KESEAKNRELLEEMQSLRKRMEEK 935

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>YHES_ECOLI (P63389) Hypothetical ABC transporter ATP-binding protein yheS|
          Length = 637

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
 Frame = +1

Query: 268 ARIDEEIRKLDEKIADAEENLGESEV----REAHLAKSL 372
           AR+++E+ KL+ ++A AEE LG+SE+    R+A L   L
Sbjct: 565 ARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACL 603

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>YHES_ECO57 (P63390) Hypothetical ABC transporter ATP-binding protein yheS|
          Length = 637

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
 Frame = +1

Query: 268 ARIDEEIRKLDEKIADAEENLGESEV----REAHLAKSL 372
           AR+++E+ KL+ ++A AEE LG+SE+    R+A L   L
Sbjct: 565 ARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACL 603

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>ATG20_CANGA (Q6FR93) Autophagy-related protein 20|
          Length = 753

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
 Frame = +1

Query: 127 DVDDLSKVDIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMR-----ARIDEEIR 291
           D + +  VDI+  V S +   D+    E L  T +LE D       +      ++DE++ 
Sbjct: 144 DSEAIESVDIKGKVSSGISDADVLKPQEELVHTAILENDNPFYDANKEISGSKKLDEKVN 203

Query: 292 KLDEKIADAEENLGESEVREAHL 360
            +D      + N G+S+ R   L
Sbjct: 204 SVDSMAETTKVNSGDSKQRMGDL 226

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>MUTS2_CLOAB (Q97GM6) MutS2 protein|
          Length = 788

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 20/47 (42%), Positives = 28/47 (59%)
 Frame = +1

Query: 256 AEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEK 396
           +E R R+ E  +KL EK+ +AEE+L  SE  +    KS   VK GE+
Sbjct: 601 SEARQRLQESRQKLKEKLNNAEESLNISERDQGEALKS---VKEGEE 644

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>ATPF_SYNP6 (P08447) ATP synthase B chain (EC 3.6.3.14) (Subunit I)|
          Length = 171

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 14/83 (16%)
 Frame = +1

Query: 250 LLAEMRARIDEEIRKLDEKIADAEENLGESEVR----EAHLAKSLYFVK---------VG 390
           LL+  RA I+ EIR+++EK+A + + L +++ +    EA  A+ L   K         + 
Sbjct: 47  LLSNRRAAIEAEIREVEEKLASSAQALSQAQTQLKEAEAEAARLLVEAKARAAAVRQEIL 106

Query: 391 EKEKA-LEQLKVTEGKTVAIGQK 456
           +K  A +E+LK T  + V+  Q+
Sbjct: 107 DKAAADVERLKATAAQDVSTEQQ 129

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>RAD50_AERPE (Q9YFZ1) DNA double-strand break repair rad50 ATPase|
          Length = 919

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
 Frame = +1

Query: 202 LFESLAATGVLEPDAALLAEMRARID----EEIRKLDEKIADAEENLGESEV--REAHLA 363
           L E L   G   P+    AE + R+     EE+RKL+  + +   NL   EV  REA   
Sbjct: 528 LEEGLRELGFQTPEDLAKAEQKLRMLRERLEELRKLENSLEEKVRNLSREEVALREAKTR 587

Query: 364 KSLYFVKVG-EKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISXSIDKAK 540
                 ++G ++E+A E+LK    ++  + + +      L   L    +  +   ++KA+
Sbjct: 588 ALEVLQRLGIKEEEAREKLKTLSSESKKLERMLVSKAEDLATRLGITAYRSLDDLLEKAR 647

Query: 541 KLFE 552
           +  E
Sbjct: 648 EALE 651



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
 Frame = +1

Query: 187 DDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLG--------ESE 342
           DD+      L A   L  + A LA +++R+D+  R L E I DA E L         ES 
Sbjct: 298 DDLEKRRAELRAKASLAHEVAELARLQSRLDKLGRDL-EMIRDAVEKLEVSRRLKEIESA 356

Query: 343 VREA--HLAKSLYFVKVGEKEKALEQLKVTEGKTV 441
            REA   L ++   +K  ++   L   +VT G+++
Sbjct: 357 RREAENRLLEARSSIKEEQRRYTLLDYRVTRGRSI 391

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>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC 3.6.1.-)|
            (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1
            protein) (Mitotic growth and transcription activator)
            (Brahma protein homolog 1) (SWI/SNF-related
            matrix-associated actin
          Length = 1647

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +1

Query: 151  DIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADA--EE 324
            D+  DV+   ++     L  SL     +  D+ +L  +   + ++I K D+   +   EE
Sbjct: 1524 DLEKDVMLLCQNAQTFNLEGSL-----IYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1578

Query: 325  NLGESEVREAHLAKSLYFVKVGEKEKALEQLK 420
              GE E  E+        +K+G KEKA ++LK
Sbjct: 1579 EEGEEEGSESESRSVKVKIKLGRKEKAQDRLK 1610

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>POTA_MYCPN (P75059) Spermidine/putrescine import ATP-binding protein potA (EC|
           3.6.3.31)
          Length = 560

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
 Frame = +1

Query: 211 SLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKV- 387
           +LA + V+EPD  LL E  + +D ++RK          NL + E+++ H    L F+ V 
Sbjct: 358 ALARSLVIEPDILLLDEPLSALDAKVRK----------NL-QKELQKIHQQSGLTFILVT 406

Query: 388 GEKEKAL----EQLKVTEGKTVAIGQKMDL 465
            ++E+AL      + + EG  + +G   D+
Sbjct: 407 HDQEEALVLSNRIVVMNEGNILQVGSPADI 436

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>TPM_CHAFE (Q9N2R3) Tropomyosin (Allergen Cha f 1) (Cha f I) (Fragment)|
          Length = 264

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = +1

Query: 256 AEMRA-RIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEG 432
           A +RA + +EEIR   +K+   E  L +++ +      S    K+ EKEKAL+     EG
Sbjct: 32  ANLRAEKTEEEIRATQKKMQQVENELDQAQEQ-----LSAANTKLDEKEKALQN---AEG 83

Query: 433 KTVAIGQKMDL 465
           +  A+ +++ L
Sbjct: 84  EVAALNRRIQL 94

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>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B antigen)|
          Length = 1164

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
 Frame = +1

Query: 118 SHPDVDDLSKV--DIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIR 291
           ++ D D + K   DIR     A K +D        A   V E    L +  +A +D+EI+
Sbjct: 215 TNEDKDSMLKKIEDIRKQAQQADKKED--------AEVKVREELGKLFSSTKAGLDQEIQ 266

Query: 292 KLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGK 435
           +  +K   +EEN  + +   A+  ++L    + E +KA    + T+ K
Sbjct: 267 EHVKKETSSEENTQKVDEHYANSLQNLAQKSLEELDKATTNEQATQVK 314

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>ORC2_MOUSE (Q60862) Origin recognition complex subunit 2|
          Length = 576

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
 Frame = +1

Query: 184 SDDMAPLFESLAATGVLEPDAALLAEMRARIDEE-----IRKL-------DEKIADAEEN 327
           SD +   FE+ +++ VL  D  L    RAR+D++     +RK         E++    E 
Sbjct: 236 SDLVEEYFEAHSSSKVLTSDRTLQRLRRARVDQKTLHNLLRKFVPSFSAEIERLNQQHEK 295

Query: 328 LGESEVREAHLAKSLYFVKVGEKEKALEQLKVT 426
           L    + + HL  ++    +G K   LE+ + T
Sbjct: 296 LFHKWMLQLHLGFNIVLYGLGSKRDLLEKFRTT 328

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>POTA_MYCGE (P47288) Spermidine/putrescine import ATP-binding protein potA (EC|
           3.6.3.31)
          Length = 559

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
 Frame = +1

Query: 211 SLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKV- 387
           +LA + V+EP+  LL E  + +D ++RK          NL + E+++ H    L F+ V 
Sbjct: 357 ALARSLVVEPEILLLDEPLSALDAKVRK----------NL-QKELQQIHKKSGLTFILVT 405

Query: 388 GEKEKAL----EQLKVTEGKTVAIGQKMDL 465
            ++E+AL      + + EG  + +G  +D+
Sbjct: 406 HDQEEALVLSDRIVVMNEGNILQVGNPVDI 435

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>ZN365_RAT (Q5PQS2) Protein ZNF365|
          Length = 408

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
 Frame = +1

Query: 130 VDDLSKVDIRSDVLSAVKSDDMAPLFESLAA--TGVLEPDAALLAEMRARIDEEIRKLDE 303
           V   + VDIR+D L A +S    P  ++ AA    V E    ++  +   I++ I KL +
Sbjct: 127 VQTYTAVDIRADSLDAPRSSSGLPTQDTKAAFEAHVREKFNRMVEAVDRTIEKRIDKLTK 186

Query: 304 KIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQ 414
           ++A     L   EVR A +  +    +V  +E+AL +
Sbjct: 187 ELAQKTAEL--LEVRAAFVQLTQKKQEVQRRERALHK 221

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>MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle|
            myosin heavy chain IIc) (NMHC II-C)
          Length = 2000

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
 Frame = +1

Query: 253  LAEMRARIDEE-----------IRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKE 399
            + E+RAR+ EE           I  L+ K+A AEE L E E RE  L+  L  V+  EK 
Sbjct: 1815 IQELRARLGEEDAGARARQKMLIAALESKLAQAEEQL-EQESRERILSGKL--VRRAEKR 1871

Query: 400  KALEQLKVTEGKTVA 444
                 L+V E + VA
Sbjct: 1872 LKEVVLQVDEERRVA 1886

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>YGCJ_ECOLI (Q46899) Hypothetical protein ygcJ|
          Length = 363

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
 Frame = +1

Query: 232 LEPDAALLAEMRARIDEE-IRKLDEKIADAEENLGESEVREAHLA--KSLYFVKVGEK-- 396
           ++ DA    + R RI  + +++   K     +N+GES +R  HLA  + +   K+GE+  
Sbjct: 25  MQKDAIFGGKRRVRISSQSLKRAMRKSGYYAQNIGESSLRTIHLAQLRDVLRQKLGERFD 84

Query: 397 EKALEQ-LKVTEGKTVAIGQKM 459
           +K +++ L +  GK+V   +K+
Sbjct: 85  QKIIDKTLALLSGKSVDEAEKI 106

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>SYTM_ARATH (O04630) Threonyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.3) (Threonine--tRNA ligase) (ThrRS)
          Length = 709

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = +1

Query: 232 LEPDAALLAEMRARIDEEIRKLDEKIADA--------EENLGESEVREAHLAKSLYFVKV 387
           + P  A++  +  +  +   K+ ++I DA         +   + +VREA LA+  Y + V
Sbjct: 610 ISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKKVREAQLAQYNYILVV 669

Query: 388 GEKEKALEQLKV 423
           GE E A  Q+ V
Sbjct: 670 GETEAATGQVSV 681

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>SYCP1_HUMAN (Q15431) Synaptonemal complex protein 1 (SCP-1)|
          Length = 976

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
 Frame = +1

Query: 250 LLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVG-----EKEKALEQ 414
           LL E R    +++ +L+EK     ENL +S  ++ HL K L  +KV        +KALE+
Sbjct: 288 LLEESR----DKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEE 343

Query: 415 LKVTEGKTV 441
                 KT+
Sbjct: 344 DLQIATKTI 352

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>TPM_HOMAM (O44119) Tropomyosin (Allergen Hom a 1)|
          Length = 284

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +1

Query: 256 AEMRA-RIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEG 432
           A +RA + +EEIR   +K+   E  L + + +      SL   K+ EKEKAL+     EG
Sbjct: 32  ANIRAEKTEEEIRITHKKMQQVENELDQVQEQ-----LSLANTKLEEKEKALQN---AEG 83

Query: 433 KTVAIGQKMDLV 468
           +  A+ +++ L+
Sbjct: 84  EVAALNRRIQLL 95

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>IFB2_CAEEL (Q19286) Intermediate filament protein ifb-2 (Intermediate filament|
           protein B2) (IF-B2) (Cel IF B2)
          Length = 543

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
 Frame = +1

Query: 208 ESLAATGVLEPDAALLAEMRARI--DEEIRKLDEKIADAEENLGESEVREAHLAK--SLY 375
           E++  + +   +++++++  A +   EEIRK++E I      L E E R + L +  +  
Sbjct: 265 ETIFQSKISAVESSIVSKNEAAVFRQEEIRKMNESITTLRAKLSELEARNSALEREANTL 324

Query: 376 FVKVGEKEKALE 411
            +++GE ++A E
Sbjct: 325 QIQLGEDQRAYE 336

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>SLAP_BACCI (P35824) S-layer-related protein precursor|
          Length = 1616

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +2

Query: 218  PPRACWSRTPHCSPRCAPGSTRRSA 292
            P R  W+R P CS  C P S R  A
Sbjct: 1398 PRRWSWTRPPECSASCPPASNRPGA 1422

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>NPS12_ARATH (Q9LNH6) Novel plant SNARE 12 (AtNPSN12)|
          Length = 265

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = +1

Query: 316 AEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKM--DLVFYTLQIG 489
           AEEN+  +              ++ E ++A+E+ K    +T+ +G +   +L   T Q+G
Sbjct: 126 AEENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQTDQMG 185

Query: 490 LFYMDFDLISXSIDKAKKLFEE 555
               D D I  S+ KA +L +E
Sbjct: 186 RVVNDLDTIQFSLKKASQLVKE 207

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>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 700

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 21/76 (27%), Positives = 35/76 (46%)
 Frame = +1

Query: 241 DAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLK 420
           D   L E     +E++++LD KIA  E        + A L++S      G  + A EQL 
Sbjct: 259 DTKALRETIQVQEEQMKELDAKIAALEHEASLFNAKMADLSESDLLDHSGAFKAAKEQLS 318

Query: 421 VTEGKTVAIGQKMDLV 468
              G+ +A+ +  D +
Sbjct: 319 DKTGQILALEKSRDAI 334

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>YKQ9_CAEEL (P34304) Hypothetical protein C06E1.9|
          Length = 643

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
 Frame = +1

Query: 127 DVDDLSKVDIRS---------DVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARID 279
           +++ L++ D R+         +  SA     +AP+      +  ++  A L A   A   
Sbjct: 409 EIEKLARADKRAKDEETRKNNETKSASNLFSLAPILSDRPPSPPVDQQAELRAHAEAYRT 468

Query: 280 EEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAI 447
             + KL +  ADA      SE + A  A++L  +   +K  AL  LK++E   VAI
Sbjct: 469 SVLTKLQKIRADAAGPSSPSE-KIAVDAENLVPLATSKKYSALNSLKISEADKVAI 523

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>IF3A_CAEEL (P34339) Probable eukaryotic translation initiation factor 3|
           subunit 10 (eIF-3 theta) (eIF3a) (Egg-laying defective
           protein 45)
          Length = 1076

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 217 AATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGE- 393
           AAT   + + A  AE   R+DE+ ++ + K   AE++  + ++++  L K        E 
Sbjct: 604 AATEQAKREEAARAEEMKRLDEQNKESERKRKQAEQDEIQKKIKQDQLYKMQQNAIYQEI 663

Query: 394 -KEKALEQLKVTEGKTVAIGQK 456
            KEK LEQ +  + + V   Q+
Sbjct: 664 IKEKGLEQFRDMDPEQVLREQR 685

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>GUN_BACS1 (P06564) Endoglucanase precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Alkaline cellulase)
          Length = 800

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 151 DIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEE 324
           D+ SD    V  D++   FE  A T  +EP+     E    +DE+  K ++K A+ EE
Sbjct: 742 DVESDFAGRVFVDNVR--FEGAATTEPVEPEPVDPGEETPPVDEKEAKTEQKEAEKEE 797

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>SYV_METCA (Q606C1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 921

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 25/94 (26%)
 Frame = +1

Query: 199  PLFESLA--------ATGVLEPDAA--LLAEMRA---------------RIDEEIRKLDE 303
            PL E LA        A G  EP+AA  L+ E+R                R+D+EI++LD+
Sbjct: 812  PLLEKLARLESLNWLAPGQAEPEAAIALVGELRVLIPMRGLIDKEAELTRLDKEIQRLDK 871

Query: 304  KIADAEENLGESEVREAHLAKSLYFVKVGEKEKA 405
            ++   E  LG++    + L+K+     V EKEKA
Sbjct: 872  ELPRLEGKLGDA----SFLSKAP--PAVVEKEKA 899

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>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 984

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +1

Query: 256 AEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGK 435
           +E++AR DEE R+ + +  + E    + + RE    K     +  EK+K  E  K  E K
Sbjct: 558 SEVKARRDEEERERERREREREREKEKEKEREREKEKEKEKEREREKQKQKESEKERESK 617

Query: 436 TVAIGQKMD 462
               G+  D
Sbjct: 618 EKEKGKHED 626

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>GAS7_RAT (O55148) Growth-arrest-specific protein 7 (GAS-7)|
          Length = 422

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +1

Query: 253 LAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKV 423
           L   R    ++++K D  IAD  + LGES       A+     +  + E   +QL++
Sbjct: 249 LMNFRENFKKDMKKCDHHIADLRKQLGESRYASVEKARKALTERQKDLEMKTQQLEI 305

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>YKI5_CAEEL (P46012) Hypothetical protein C01G6.5|
          Length = 952

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
 Frame = +1

Query: 118  SHPDVDDLSKVDIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKL 297
            S  + D    VD  SD     +S  +    ++L+AT    P  +   + +     ++++L
Sbjct: 687  SKENTDQKRAVDDSSD-----ESARLVKQIKALSATPSSTPAESSKRKQKDTSSRKMKQL 741

Query: 298  DEKIADAE-ENLGES----------EVREAHLAKSLYFVKVGEKEKALEQLKVTE 429
            DE  AD++ E+ G S            R   + KS    KVG+KEK +E    T+
Sbjct: 742  DESSADSDSEDDGRSGDKSTKRRDKARRSTRIGKSTPAKKVGKKEKVVEDEDETD 796

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>HBHA_MYCTU (P0A5P6) Heparin-binding hemagglutinin (Adhesin)|
          Length = 198

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
 Frame = +1

Query: 151 DIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRK-------LDEKI 309
           DI++ +L+A+ + D+A    +   T + E       + R+R++E   +       L E++
Sbjct: 8   DIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQL 67

Query: 310 ADAEENLGESEVREA-----HLAKSLYFVKVGEKEKALEQLK 420
            +  E     E+R+A       A S Y   V   E ALE+L+
Sbjct: 68  TELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLR 109

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>HBHA_MYCBO (P0A5P7) Heparin-binding hemagglutinin (Adhesin)|
          Length = 198

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
 Frame = +1

Query: 151 DIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRK-------LDEKI 309
           DI++ +L+A+ + D+A    +   T + E       + R+R++E   +       L E++
Sbjct: 8   DIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQL 67

Query: 310 ADAEENLGESEVREA-----HLAKSLYFVKVGEKEKALEQLK 420
            +  E     E+R+A       A S Y   V   E ALE+L+
Sbjct: 68  TELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLR 109

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>PFDA_PYRFU (Q8U3T0) Prefoldin alpha subunit (GimC alpha subunit)|
          Length = 146

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 274 IDEEIRKLDEKIADAEENLGESEVREAHLAK 366
           +DE I++ DE I   +E L E + R A LAK
Sbjct: 99  LDERIKEYDEAIRKTQEALNELQKRAAELAK 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.132    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,582,268
Number of Sequences: 219361
Number of extensions: 987337
Number of successful extensions: 3614
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 3481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3599
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result