Clone Information

BLAST Search Result

Clone Name	bart40g01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MSH6_ARATH (O04716) DNA mismatch repair protein MSH6-1 (AtMsh6-1)	38	0.017
2	PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing famil...	38	0.017
3	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	35	0.19
4	IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 s...	35	0.19
5	WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interactin...	34	0.24
6	PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precu...	31	0.30
7	AEX3_CAEEL (O02626) Regulator of presynaptic activity aex-3 (Abo...	33	0.41
8	RIN3_HUMAN (Q8TB24) Ras and Rab interactor 3 (Ras interaction/in...	33	0.54
9	WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protei...	29	0.63
10	Y1277_CHLTE (Q8KCY0) UPF0251 protein CT1277	33	0.71
11	PKN3_HUMAN (Q6P5Z2) Serine/threonine-protein kinase N3 (EC 2.7.1...	32	0.92
12	ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (I...	32	0.92
13	THAP8_HUMAN (Q8NA92) THAP domain-containing protein 8	32	0.92
14	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	32	1.2
15	PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing famil...	32	1.2
16	HXB2_HUMAN (P14652) Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8)	32	1.6
17	ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (V...	31	2.1
18	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	31	2.7
19	PKHA4_RAT (P60669) Pleckstrin homology domain-containing family ...	31	2.7
20	CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3...	31	2.7
21	SPIB_HUMAN (Q01892) Transcription factor Spi-B	30	3.5
22	ACVS_EMENI (P27742) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D...	30	3.5
23	ZN703_HUMAN (Q9H7S9) Zinc finger protein 703	30	4.6
24	SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	30	4.6
25	PROB_RALEJ (Q46X18) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut...	30	4.6
26	HOX3_BRAFL (P50901) Homeobox protein HOX3	30	4.6
27	BHLH8_HUMAN (Q7RTS1) Class B basic helix-loop-helix protein 8 (b...	30	4.6
28	SPHK2_MOUSE (Q9JIA7) Sphingosine kinase 2 (EC 2.7.1.-) (SK 2) (S...	30	4.6
29	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	26	5.9
30	SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)	30	6.0
31	TEGU_EBV (P03186) Large tegument protein	30	6.0
32	PLS3_RAT (Q6QBQ4) Phospholipid scramblase 3 (PL scramblase 3) (C...	30	6.0
33	CD2L7_CAEEL (P46551) Putative cell division cycle 2-related prot...	30	6.0
34	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	30	6.0
35	DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-re...	30	6.0
36	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	29	7.8
37	PDC6I_RAT (Q9QZA2) Programmed cell death 6-interacting protein (...	29	7.8
38	HEPA_HCMVA (P16827) DNA helicase/primase complex-associated protein	29	7.8
39	RL4_PASMU (Q9CL33) 50S ribosomal protein L4	29	7.8
40	RL4_HAEDU (Q7VKD3) 50S ribosomal protein L4	29	7.8
41	RL4_ACTAC (P55836) 50S ribosomal protein L4	29	7.8
42	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	29	7.8
43	SCND1_HUMAN (P57086) SCAN domain-containing protein 1	29	7.8

>MSH6_ARATH (O04716) DNA mismatch repair protein MSH6-1 (AtMsh6-1)|
          Length = 1324

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +1

Query: 124 PVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLPAAYARVPA--PLRGP 276
           P P+P  SN+  PKSN+P+    +P PS P   P   P   + +PA  P  GP
Sbjct: 37  PSPSPSLSNKKTPKSNNPNPKSPSPSPSPPKKTPKLNPNPSSNLPARSPSPGP 89

to top

>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
 Frame = +1

Query: 109 PLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYT----VPVRLPAAY-------ARV 255
           PL  PP P  L   RS P    P+ S     P+ P+T    + VR P  +       +R 
Sbjct: 235 PLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQRQTLSRP 294

Query: 256 PAPLRGPPEVAGGAAARSRP 315
           P P RGPP  AGG      P
Sbjct: 295 PTPRRGPPSEAGGGKPPRSP 314

to top

>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 15/98 (15%)
 Frame = +1

Query: 70  PAAASQIHPANNLPLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRL----P 237
           P A SQ  P    P R  P P P TS+  +P+    + S  +P P  P   P R     P
Sbjct: 287 PGAGSQAPPPPP-PSRPGPPPLPPTSSDEIPRLPQRNLSLTSPTP--PLPSPGRSGPLPP 343

Query: 238 AAYARVPAPLRGPPEVAG-----------GAAARSRPA 318
               R P P+R PP  +G           G+ AR+ PA
Sbjct: 344 PPTERPPPPVRDPPGRSGPLPPPPPINRNGSTARALPA 381

to top

>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 361

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 29/80 (36%), Positives = 33/80 (41%)
 Frame = +1

Query: 79  ASQIHPANNLPLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLPAAYARVP 258
           AS   PAN  P      P P+ +  + P S        AP PS P   P   PAA    P
Sbjct: 2   ASPAVPANVPPATAAAAPAPVVT--AAPAS--------APTPSTPAPTPAATPAA---SP 48

Query: 259 APLRGPPEVAGGAAARSRPA 318
           AP+   P VA  AA    PA
Sbjct: 49  APVSSDPAVAAPAAPGQTPA 68

to top

>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
 Frame = +1

Query: 70  PAAASQIHPANNLPLRDPPVPNPLTSNRS-----LPKSNHPS*SCLAPCPSWPYTVPVRL 234
           P+A+SQ  P    P R  P P P +S+ +     LP+ N    S   P PS   + P+  
Sbjct: 300 PSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPP 359

Query: 235 PAAYARVPAPLRGPPEVAG-----------GAAARSRPA 318
           P +  R P P+R PP  +G           G+ +R+ PA
Sbjct: 360 PPS-ERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPA 397

to top

>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)|
          Length = 426

 Score = 31.2 bits (69), Expect(2) = 0.30
 Identities = 23/74 (31%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
 Frame = +1

Query: 70  PAAASQIHPANNLPLRDPPVPNPLTSNRSLPKSNHPS*SCLAP-CPSWPYTVPVRLPAAY 246
           P  A    PA   P   PPV  P  S  + P +  P     A   P  P   PV  P   
Sbjct: 185 PVKAPSPSPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAYPPVM 244

Query: 247 ARVPAPLRGPPEVA 288
              P+P   PP +A
Sbjct: 245 TPSPSPAAEPPIIA 258



 Score = 21.6 bits (44), Expect(2) = 0.30
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 48  EPSPTSGSSRRQPDPP 95
           +PSP   S+++ P PP
Sbjct: 157 KPSPPDQSAKQPPQPP 172

to top

>AEX3_CAEEL (O02626) Regulator of presynaptic activity aex-3 (Aboc, expulsion|
            defective protein 3)
          Length = 1409

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +1

Query: 94   PANNLPLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVR-LPAAYARVPAPLR 270
            PA+ + LR P    PL  N +   +N+   +     P+ P  VP R  P    R P PL 
Sbjct: 928  PASTIDLRTPT--KPLGQNVTPTSTNNHEIAQSTRSPALPPPVPPREAPPIPKRNPPPLG 985

Query: 271  GPPEVAGGAAA 303
             PP+V  GA A
Sbjct: 986  APPKVPEGARA 996

to top

>RIN3_HUMAN (Q8TB24) Ras and Rab interactor 3 (Ras interaction/interference|
           protein 3)
          Length = 984

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 20/71 (28%), Positives = 29/71 (40%)
 Frame = +1

Query: 70  PAAASQIHPANNLPLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLPAAYA 249
           P  +    P +    R PP P P+   +    +  P    LAP P+ P      +PA + 
Sbjct: 263 PPTSDATSPTSRWAPRRPPPPPPVLPLQPCSPAQPPVLPALAPAPACPLPTSPPVPAPHV 322

Query: 250 RVPAPLRGPPE 282
              AP  GPP+
Sbjct: 323 TPHAP--GPPD 331

to top

>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 29.3 bits (64), Expect(2) = 0.63
 Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 26/108 (24%)
 Frame = +1

Query: 70  PAAASQIHPANNLPLRDPPV---PNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLP- 237
           P    ++HP    P   PPV   P+P+           PS   LAP P  PY  P  +P 
Sbjct: 211 PTPGQRLHPGREGPPAPPPVKPPPSPVNIRTG------PSGQSLAPPPP-PYRQPPGVPN 263

Query: 238 ------------------AAYARVPAPLRG----PPEVAGGAAARSRP 315
                             + + + P P+RG    PP  A  +   +RP
Sbjct: 264 GPSSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRP 311



 Score = 22.3 bits (46), Expect(2) = 0.63
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 383 PARMKGARASRPCPYPRHRRSPAPPTSGE 469
           P    GAR + P P P       PP+ G+
Sbjct: 330 PVIRNGARDAPPPPPPYRMHGSEPPSRGK 358

to top

>Y1277_CHLTE (Q8KCY0) UPF0251 protein CT1277|
          Length = 197

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 23/58 (39%), Positives = 27/58 (46%)
 Frame = -2

Query: 297 CSAGNLRRPSQGGGDSGIGSREPHRDGVGPRRAWR*AALGWMVGFGQASVRCEGIGHG 124
           CS+ N+ R S GGG  G       R G G  R +R    G   G G    RC+G GHG
Sbjct: 127 CSSQNIHRMSPGGGFGG------GRRGGGKCRGFR---SGLDRGPGHGEGRCQGEGHG 175

to top

>PKN3_HUMAN (Q6P5Z2) Serine/threonine-protein kinase N3 (EC 2.7.11.13) (Protein|
           kinase PKN-beta) (Protein-kinase C-related kinase 3)
          Length = 889

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 377 QEPARMKGARASRPCPYPRHRRSPAPPTSGERR 475
           QEP   +  R  RP   PR RR P+PP S  R+
Sbjct: 520 QEPTSEETPRTKRPHMEPRTRRGPSPPASPTRK 552

to top

>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 30/85 (35%), Positives = 35/85 (41%)
 Frame = +1

Query: 64  RDPAAASQIHPANNLPLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLPAA 243
           RDP   S   PA+  P R P  P P     S P+   P+ S  A  P+ P        A 
Sbjct: 359 RDPIVISDSPPAS--PHRPPAAPMP----GSAPRPGPPA-SAAASGPARPRAAV----AP 407

Query: 244 YARVPAPLRGPPEVAGGAAARSRPA 318
             R P P  GP   A GA   +RPA
Sbjct: 408 CVRAPPPGPGPRAPAPGAEPAARPA 432

to top

>THAP8_HUMAN (Q8NA92) THAP domain-containing protein 8|
          Length = 274

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 25/78 (32%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
 Frame = +1

Query: 64  RDPAAASQIHPANNLPLRDPPVP----NPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVR 231
           R P A SQ    +      PP P     PL  + ++P S       L P    P TV   
Sbjct: 87  RGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSGSPKTVATM 146

Query: 232 LPAAYARVPAPLRGPPEV 285
           L    A  P P R  PEV
Sbjct: 147 LLTPLAPAPTPERSQPEV 164

to top

>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 26/65 (40%), Positives = 30/65 (46%)
 Frame = +1

Query: 121 PPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLPAAYARVPAPLRGPPEVAGGAA 300
           PPVP P     SLP S  PS       PS P ++P+  PAA    P+    PP  AG  A
Sbjct: 415 PPVPTP----PSLPPSAPPSLP-----PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPA 465

Query: 301 ARSRP 315
           A   P
Sbjct: 466 APPLP 470

to top

>PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 588

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
 Frame = +1

Query: 109 PLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYT----VPVRLPAAY-------ARV 255
           PL  PP P  L   RS P    P  +     P+ P+T    + VR P  +       +R 
Sbjct: 235 PLSRPPSPLSLPRPRSAPARRPPLSAGDISFPARPHTPLSRIDVRPPLDWGPQRQTLSRP 294

Query: 256 PAPLRGPPEVAGG 294
           P P RGP   AGG
Sbjct: 295 PIPRRGPSSEAGG 307

to top

>HXB2_HUMAN (P14652) Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8)|
          Length = 356

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
 Frame = +1

Query: 97  ANNLPLRDPPVPNPLTSNRSLPK---------SNHPS*SCLAPCPSWPYTVPVRLPAAYA 249
           A + P   PP P PL +    P+         +  PS S  +P P+        +PA+  
Sbjct: 72  AEDGPALPPPPPPPLPAAPPAPEFPWMKEKKSAKKPSQSATSPSPA-----ASAVPASGV 126

Query: 250 RVPAPLRGPPEVAGGAAARSRPA 318
             PA   G PE  GG A R R A
Sbjct: 127 GSPADGLGLPEAGGGGARRLRTA 149

to top

>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
 Frame = +1

Query: 133 NPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLPAAYARV--PAPLRGPPEVAGGAAA- 303
           NP T+ RSL    H     L+P P WP T       A      PAP R P    GGA A 
Sbjct: 215 NPRTAPRSLSLGGHTV-RALSPTPPWPGTDDEDDDLADVDYVPPAPRRAPRRGGGGAGAT 273

Query: 304 --RSRPA 318
              S+PA
Sbjct: 274 RGTSQPA 280

to top

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +2

Query: 371 HSQEPARMKGARASRPCPYPRHRRSPAPPTSGERRCAS 484
           HS+ P+     R   P P  R RRSP+PP +  RR  S
Sbjct: 520 HSRSPSPSPRKRQKEPSPR-RRRRSPSPPPARRRRSPS 556

to top

>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 11/80 (13%)
 Frame = +1

Query: 109 PLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYT----VPVRLPAAY-------ARV 255
           PL  PP P  L   RS P    P  +     P+ P+T    + VR P  +       +R 
Sbjct: 235 PLSRPPSPLSLPRPRSAPVRRPPLSAGDISFPARPHTPLSRIDVRPPLDWGPQRQTLSRP 294

Query: 256 PAPLRGPPEVAGGAAARSRP 315
           P P RGP   AGG      P
Sbjct: 295 PIPRRGPFSEAGGGRPPRSP 314

to top

>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal|
           transduction protein CBL-B-B) (SH3-binding protein
           CBL-B-B)
          Length = 764

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +1

Query: 67  DPAAASQIHPANNLPLRDPPVPNPLTSNRSLPKSNHPS 180
           D      +H A N+P RD   PN     R L   N PS
Sbjct: 579 DSRTCRHLHHAENVPCRDQSTPNEAWCTRDLSGGNQPS 616

to top

>SPIB_HUMAN (Q01892) Transcription factor Spi-B|
          Length = 262

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/72 (29%), Positives = 30/72 (41%)
 Frame = +1

Query: 67  DPAAASQIHPANNLPLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLPAAY 246
           DPAAA+  HP       +PP  +P  +    P    P    L   P+  +     +P AY
Sbjct: 62  DPAAAAFSHPQAAQLCYEPPTYSPAGNLELAPSLEAPG-PGLPAYPTENFASQTLVPPAY 120

Query: 247 ARVPAPLRGPPE 282
           A  P+P+    E
Sbjct: 121 APYPSPVLSEEE 132

to top

>ACVS_EMENI (P27742) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine|
           synthase (EC 6.3.2.26)
           (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine
           synthetase) (ACV synthetase) (ACVS)
          Length = 3770

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 264 GGGDSGIGSREPHRDGVGPRRAWR*AALGWMVGFGQASVRCE 139
           G  D+G G+ +P + GVG +  +     GW  G  + + RC+
Sbjct: 40  GDVDAGNGNIDPSKSGVGVQVCFAGGLEGWKAGISKITERCD 81

to top

>ZN703_HUMAN (Q9H7S9) Zinc finger protein 703|
          Length = 590

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -2

Query: 516 VPRAAAAGSPGEAHRRSPEVGGAGLRRWRGYGQGRLARA 400
           +P  AA GSPG    R+P     GL R+  YG+  L+ A
Sbjct: 520 LPPPAAPGSPGSLSLRNPHT--LGLSRYHPYGKSHLSTA 556

to top

>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150)
            (Fragment)
          Length = 1324

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 19/92 (20%)
 Frame = +1

Query: 94   PANNLPLRDPPVPN-PLTSNRSLPKSNHPS*SCLAPCPSWPYT---------------VP 225
            PA++LP R  PVP+ P+  +R+  ++  P  S  +P  + P T                P
Sbjct: 1050 PASHLPYRRGPVPSLPVRPSRAPSRTPGPPASQSSPVDTLPATQLQQKDSSQTLEPKRPP 1109

Query: 226  VRLPAAYARVPAPLRGPPEVAGG---AAARSR 312
               P A    PAP + PP  +G    A AR R
Sbjct: 1110 PPRPVAPPARPAPPQRPPPPSGARSPAPARER 1141

to top

>PROB_RALEJ (Q46X18) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 372

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 549 GWFQR*RTIHSVPRAAAAGSPGEAHRRSPEVGGAGLR 439
           GW +R R IH +  AAA G  G A     + G  G+R
Sbjct: 65  GWVRRPREIHELQAAAAVGQMGLAQVYESQFGRYGIR 101

to top

>HOX3_BRAFL (P50901) Homeobox protein HOX3|
          Length = 411

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +1

Query: 91  HPANNLPLRDPPVPNPLTSNRSLP----KSNHPS*SCLAPCPSWPYTVPVRLPAAYARVP 258
           H  ++LP + PP    LT +  +     +SNH      +PCP  P + P  +P     VP
Sbjct: 266 HLNHSLPHQAPPHSVGLTMSGPVSPQCYQSNH------SPCP--PSSAPHPVPMGN-HVP 316

Query: 259 APLRGPPEVAGGAAA 303
            P +GPP +  G  A
Sbjct: 317 HPRQGPPHMTNGLPA 331

to top

>BHLH8_HUMAN (Q7RTS1) Class B basic helix-loop-helix protein 8 (bHLHB8) (Muscle,|
           intestine and stomach expression 1) (MIST-1)
          Length = 189

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -2

Query: 525 IHSVPRAAAAGSPGEAHRRSPEVGGAGLRR 436
           + S P  AAA +PGE  RR P   G G RR
Sbjct: 41  LRSRPARAAARAPGEGRRRRPGPSGPGGRR 70

to top

>SPHK2_MOUSE (Q9JIA7) Sphingosine kinase 2 (EC 2.7.1.-) (SK 2) (SPK 2)|
          Length = 617

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +2

Query: 5   PSLPLPRFPNLANPRA*SHLGIQPPPARSTRQTIFHFEI----LPCPIPSHLTEACPNP 169
           P+LP+P     + PRA S L + P PA +   +  H  +    LP P P+ ++   P P
Sbjct: 350 PALPIPGH---SLPRAKSELVLAPAPAPAATHSPLHRSVSDLPLPLPQPALVSPGSPEP 405

to top

>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 26.2 bits (56), Expect(2) = 5.9
 Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
 Frame = +1

Query: 70  PAAASQIHPANNLPLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVR--LPAA 243
           PA  S   PA   P+  PP P P +     PK   P      P PS P   P R   PA 
Sbjct: 231 PAPPSPSPPAPPSPV--PPSPAPPSPAPPSPKPPAPP-----PPPSPPPPPPPRPPFPAN 283

Query: 244 YARVPAPLRGPPEVA 288
               P+P   PP  A
Sbjct: 284 TPMPPSPPSPPPSPA 298



 Score = 21.9 bits (45), Expect(2) = 5.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 416 PCPYPRHRRSPAPPT 460
           P P P    SPAPPT
Sbjct: 328 PSPAPSPPPSPAPPT 342

to top

>SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)|
          Length = 747

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 35/137 (25%), Positives = 49/137 (35%), Gaps = 9/137 (6%)
 Frame = -2

Query: 507 AAAAGSPGEAHRRSPEVGGAGLRRWRGYGQGRLARAPFILAGSCEWNXXXXXXXXXXXXX 328
           AAAAG  G+        GG G    +G G+G    A     G+ +               
Sbjct: 112 AAAAGGAGQ--------GGYGGLGNQGAGRGGQGAAAAAAGGAGQGGYGGLGSQGAGRGG 163

Query: 327 XXXRWPGPCCCSAGNLRRPSQGG---------GDSGIGSREPHRDGVGPRRAWR*AALGW 175
              +  G    +AG   +   GG         G  G+GS+   R G+G + A   AA   
Sbjct: 164 LGGQGAGAAAAAAGGAGQGGYGGLGGQGAGQGGYGGLGSQGAGRGGLGGQGAGA-AAAAA 222

Query: 174 MVGFGQASVRCEGIGHG 124
             G GQ  +  +G G G
Sbjct: 223 AGGAGQGGLGGQGAGQG 239

to top

>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
 Frame = +1

Query: 64  RDPAAASQIHPANNLPLRDPPV---PNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRL 234
           R P+AA    P   +P + PP    P+P   +   P         + P P  P  +P+ L
Sbjct: 455 RPPSAARLPPPVIPIPHQSPPASPTPHPAPVSTIAPS--------VTPSPRLPLQIPIPL 506

Query: 235 P-AAYARVPAPLRGPPEVAGGAAA 303
           P AA +    PL  P      AAA
Sbjct: 507 PQAAPSNPKIPLTTPSPSPTAAAA 530

to top

>PLS3_RAT (Q6QBQ4) Phospholipid scramblase 3 (PL scramblase 3)|
           (Ca(2+)-dependent phospholipid scramblase 3)
          Length = 296

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = +1

Query: 193 APCPSWPYTVPVRLPAAYARVPAPLRGPPEVAGGAAA 303
           AP P  PY VP   P A A  P P + P    G A A
Sbjct: 11  APSPPPPYPVPAGYPEAAALHPGPGQAPVPTQGPAPA 47

to top

>CD2L7_CAEEL (P46551) Putative cell division cycle 2-related protein kinase 7|
           (EC 2.7.11.22)
          Length = 730

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/81 (25%), Positives = 31/81 (38%)
 Frame = +1

Query: 70  PAAASQIHPANNLPLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLPAAYA 249
           P  +  I+P   +  + PP P P  S    P    P      P PS           + +
Sbjct: 190 PPPSFNINPFQPMFSQPPPPPLPPNSQFMTPPPRPPPAPFSIPPPSVDIHFAATASFSLS 249

Query: 250 RVPAPLRGPPEVAGGAAARSR 312
            +P P   PP+  GGA++  R
Sbjct: 250 SIPPP---PPQTDGGASSSKR 267

to top

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +1

Query: 109 PLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWP-YTVPVRLPAAYARVPAPLRGPP 279
           P   PP+P P T +   P  + P  +   P P  P Y+ P   P AY+  P P   PP
Sbjct: 397 PAYSPPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPP---PPAYSPPPPPTYSPP 451

to top

>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)|
           (DRF1) (mDIA1) (p140mDIA)
          Length = 1255

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 16/97 (16%)
 Frame = +1

Query: 73  AAASQIHPANNLP------LRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWP----YTV 222
           ++++ + PA  LP      +  PP P PL      P    P  +C+ P P  P       
Sbjct: 566 SSSAAVPPAPPLPGDSGTVIPPPPPPPPLPGGVVPPSPPLPPGTCIPPPPPLPGGACIPP 625

Query: 223 PVRLPAAYA-RVPAPLRG-----PPEVAGGAAARSRP 315
           P +LP + A   P PL G     PP    GA A   P
Sbjct: 626 PPQLPGSAAIPPPPPLPGVASIPPPPPLPGATAIPPP 662

to top

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 374 SQEPARMKGARASRPCPYPRHRRSPAPP 457
           S  P   +  R+  P P PR RR+P PP
Sbjct: 563 SPSPPPTRRRRSPSPAPPPRRRRTPTPP 590

to top

>PDC6I_RAT (Q9QZA2) Programmed cell death 6-interacting protein|
           (ALG-2-interacting protein 1) (Fragment)
          Length = 401

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = +1

Query: 115 RDPPVPN-PLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLPAAYARVPAPL----RGPP 279
           R+P  P+ P  + +S P   H +    AP P+ P T+P   P   AR P P+    R PP
Sbjct: 248 REPSAPSIPPPAYQSSPAGGHAT----APTPA-PRTMPPAKPQPPARPPPPVLPANRVPP 302

Query: 280 EVAGGAAA 303
             A  A A
Sbjct: 303 AAAATAPA 310

to top

>HEPA_HCMVA (P16827) DNA helicase/primase complex-associated protein|
          Length = 873

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 309 GPCCCSAGNLRRPSQGGGDSGIGSREPHRDGVG 211
           G CC       R S GGG SG+G  + H  G G
Sbjct: 611 GACCAGCVVTHRHSSGGGGSGVGDAD-HASGGG 642

to top

>RL4_PASMU (Q9CL33) 50S ribosomal protein L4|
          Length = 200

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -2

Query: 525 IHSVPRAAAAGSP--GEAHRRSPEVGGAGLRRWRGYGQGR 412
           IH V  A AAG+     A +   EV G+G + WR  G GR
Sbjct: 27  IHQVVVAYAAGARQGSRAQKTRAEVSGSGKKPWRQKGTGR 66

to top

>RL4_HAEDU (Q7VKD3) 50S ribosomal protein L4|
          Length = 200

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -2

Query: 525 IHSVPRAAAAGSP--GEAHRRSPEVGGAGLRRWRGYGQGR 412
           IH V  A AAG+     A +   EV G+G + WR  G GR
Sbjct: 27  IHQVVVAYAAGARQGSRAQKTRAEVSGSGKKPWRQKGTGR 66

to top

>RL4_ACTAC (P55836) 50S ribosomal protein L4|
          Length = 200

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -2

Query: 525 IHSVPRAAAAGSP--GEAHRRSPEVGGAGLRRWRGYGQGR 412
           IH V  A AAG+     A +   EV G+G + WR  G GR
Sbjct: 27  IHQVVVAYAAGARQGSRAQKTRAEVSGSGKKPWRQKGTGR 66

to top

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 374 SQEPARMKGARASRPCPYPRHRRSPAPP 457
           S  P   +  R+  P P PR RR+P PP
Sbjct: 549 SPSPPPTRRRRSPSPAPPPRRRRTPTPP 576

to top

>SCND1_HUMAN (P57086) SCAN domain-containing protein 1|
          Length = 179

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +1

Query: 100 NNLPLRDPPVPNPLTSNRSLPKSNHPS*SCLAPCPSWPYTVPVRLPAAYARVPAPLRGPP 279
           ++LP   PP P P + N ++P++         P P    +  + LP      PAP+   P
Sbjct: 38  SSLPEASPPAPEPSSPNAAVPEA--------IPTPRAAASAALELPLG----PAPVSVAP 85

Query: 280 EVAGGAAARSRP 315
           +    A ARS P
Sbjct: 86  QAE--AEARSTP 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.133    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,918,598
Number of Sequences: 219361
Number of extensions: 1784373
Number of successful extensions: 6689
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 5763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6639
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result