ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart40f12 |
|---|---|
| Clone Library Name | barley_pub |
>MSBP1_ARATH (Q9XFM6) Membrane steroid-binding protein 1 (AtMP1)| Length = 220 Score = 196 bits (497), Expect = 5e-50 Identities = 102/161 (63%), Positives = 112/161 (69%), Gaps = 5/161 (3%) Frame = +2 Query: 107 ELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXXXX 286 ELW+TLK+AI AYTGLSP +Y V+SG FA Sbjct: 4 ELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEE 63 Query: 287 X-----VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKD 451 VQ+GE+ EEEL+QYDGSDP+KPLLMAIK QIYDVTQSRMFYGPGGPYALFAGKD Sbjct: 64 PPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKD 123 Query: 452 ASRALAKMSFEPQDLNGDTSGLGPFELDALQDWGVQFMSKY 574 ASRALAKMSFE +DL D SGLGPFELDALQDW +FMSKY Sbjct: 124 ASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKY 164
>SBP2_ARATH (Q9M2Z4) Putative steroid binding protein 2 (AtMP2)| Length = 233 Score = 193 bits (490), Expect = 3e-49 Identities = 101/159 (63%), Positives = 110/159 (69%), Gaps = 1/159 (0%) Frame = +2 Query: 101 VAELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXX 280 V ++WETLK+ I AYTGLSP +Y VVSG F Sbjct: 2 VQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP 61 Query: 281 XXX-VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDAS 457 VQLGE+ EEEL+ YDGSD KKPLLMAIKGQIYDV+QSRMFYGPGGPYALFAGKDAS Sbjct: 62 LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDAS 121 Query: 458 RALAKMSFEPQDLNGDTSGLGPFELDALQDWGVQFMSKY 574 RALAKMSFE QDL GD SGLG FEL+ALQDW +FMSKY Sbjct: 122 RALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKY 160
>SBP3_ARATH (Q9SK39) Putative steroid-binding protein 3 (AtMP3)| Length = 100 Score = 99.0 bits (245), Expect = 9e-21 Identities = 45/91 (49%), Positives = 63/91 (69%) Frame = +2 Query: 302 EVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 481 E E+L QY+G+D KP+ +AIKG+++DVT + FYG GG Y++FAGKDASRAL KMS Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61 Query: 482 EPQDLNGDTSGLGPFELDALQDWGVQFMSKY 574 +D++ GL E++ L DW +F +KY Sbjct: 62 NEEDVSPSLEGLTEKEINTLNDWETKFEAKY 92
>NENF_MOUSE (Q9CQ45) Neudesin precursor (Neuron-derived neurotrophic factor)| (Secreted protein of unknown function) (SPUF protein) Length = 171 Score = 89.4 bits (220), Expect = 7e-18 Identities = 41/79 (51%), Positives = 55/79 (69%) Frame = +2 Query: 311 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 490 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY AGKD+SR +AKMS +P Sbjct: 48 EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107 Query: 491 DLNGDTSGLGPFELDALQD 547 DL DT+GL EL+AL D Sbjct: 108 DLTHDTTGLTAKELEALDD 126
>NENF_RAT (Q6IUR5) Neudesin precursor (Neuron-derived neurotrophic factor)| (Spinal cord injury-related protein 10) (SCIRP10-related protein) Length = 171 Score = 88.6 bits (218), Expect = 1e-17 Identities = 41/79 (51%), Positives = 54/79 (68%) Frame = +2 Query: 311 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 490 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY AGKD+SR +AKMS +P Sbjct: 48 EEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107 Query: 491 DLNGDTSGLGPFELDALQD 547 DL D SGL EL+AL D Sbjct: 108 DLTHDISGLTAKELEALDD 126
>PGRC1_RAT (P70580) Membrane-associated progesterone receptor component 1| (Acidic 25 kDa protein) (25-DX) Length = 194 Score = 85.1 bits (209), Expect = 1e-16 Identities = 45/90 (50%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Frame = +2 Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 493 ELR+YDG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 76 ELRRYDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 494 LN---GDTSGLGPFELDALQDWGVQFMSKY 574 L D S L P + + L DW QF KY Sbjct: 134 LKDEYDDLSDLTPAQQETLNDWDSQFTFKY 163
>NENF_HUMAN (Q9UMX5) Neudesin precursor (Neuron-derived neurotrophic factor)| (Secreted protein of unknown function) (SPUF protein) Length = 172 Score = 85.1 bits (209), Expect = 1e-16 Identities = 38/79 (48%), Positives = 54/79 (68%) Frame = +2 Query: 311 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 490 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY GKD++R +AKMS +P Sbjct: 49 EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPA 108 Query: 491 DLNGDTSGLGPFELDALQD 547 DL DT+GL EL+AL + Sbjct: 109 DLTHDTTGLTAKELEALDE 127
>PGRC1_PIG (Q95250) Membrane-associated progesterone receptor component 1| Length = 193 Score = 83.6 bits (205), Expect = 4e-16 Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Frame = +2 Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 493 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 75 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 132 Query: 494 LN---GDTSGLGPFELDALQDWGVQFMSKY 574 L D S L P + + L DW QF KY Sbjct: 133 LKDEYDDLSDLTPAQQETLNDWDSQFTFKY 162
>PGRC1_MOUSE (O55022) Membrane-associated progesterone receptor component 1| Length = 194 Score = 83.6 bits (205), Expect = 4e-16 Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Frame = +2 Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 493 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 76 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 494 LN---GDTSGLGPFELDALQDWGVQFMSKY 574 L D S L P + + L DW QF KY Sbjct: 134 LKDEYDDLSDLTPAQQETLSDWDSQFTFKY 163
>PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor component 2| (Progesterone membrane-binding protein) (Steroid receptor protein DG6) Length = 223 Score = 82.8 bits (203), Expect = 6e-16 Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 3/90 (3%) Frame = +2 Query: 314 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEP-- 487 E+LRQYDGS + +L+A+ G+++DVT+ FYGP GPY +FAG+DASR LA + Sbjct: 106 EQLRQYDGSRNPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 164 Query: 488 -QDLNGDTSGLGPFELDALQDWGVQFMSKY 574 +D D S L +++++++W +QF KY Sbjct: 165 LRDEYDDLSDLNAVQMESVREWEMQFKEKY 194
>PGRC2_MOUSE (Q80UU9) Membrane associated progesterone receptor component 2| (Fragment) Length = 214 Score = 82.0 bits (201), Expect = 1e-15 Identities = 38/90 (42%), Positives = 60/90 (66%), Gaps = 3/90 (3%) Frame = +2 Query: 314 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEP-- 487 E+LRQYDG+ + +L+A+ G+++DVT+ FYGP GPY +FAG+DASR LA + Sbjct: 97 EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 155 Query: 488 -QDLNGDTSGLGPFELDALQDWGVQFMSKY 574 +D D S L +++++++W +QF KY Sbjct: 156 LRDEYDDLSDLNAVQMESVREWEMQFKEKY 185
>PGRC2_RAT (Q5XIU9) Membrane associated progesterone receptor component 2| Length = 217 Score = 82.0 bits (201), Expect = 1e-15 Identities = 38/90 (42%), Positives = 60/90 (66%), Gaps = 3/90 (3%) Frame = +2 Query: 314 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEP-- 487 E+LRQYDG+ + +L+A+ G+++DVT+ FYGP GPY +FAG+DASR LA + Sbjct: 100 EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 158 Query: 488 -QDLNGDTSGLGPFELDALQDWGVQFMSKY 574 +D D S L +++++++W +QF KY Sbjct: 159 LRDEYDDLSDLNAVQMESVREWEMQFKEKY 188
>PGRC1_HUMAN (O00264) Membrane-associated progesterone receptor component 1| (mPR) Length = 194 Score = 80.1 bits (196), Expect = 4e-15 Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 4/90 (4%) Frame = +2 Query: 317 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 493 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 76 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 494 LN---GDTSGLGPFELDALQDWGVQFMSKY 574 L D S L + + L DW QF KY Sbjct: 134 LKDEYDDLSDLTAAQQETLSDWESQFTFKY 163
>YL81_SCHPO (O13995) Hypothetical protein C25B8.01 in chromosome I| Length = 166 Score = 73.9 bits (180), Expect = 3e-13 Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 7/93 (7%) Frame = +2 Query: 317 ELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDL 496 EL++Y+GS + +AIKG +Y+VT FYGP GPY+ FAG DASR LAK SF+ + + Sbjct: 47 ELKEYNGSK-NSLVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNSFDDEFI 105 Query: 497 N-------GDTSGLGPFELDALQDWGVQFMSKY 574 D S L E AL DW F KY Sbjct: 106 PDSDAEELDDCSDLNDEERQALNDWKAFFDQKY 138
>DAP1_YEAST (Q12091) Damage response protein 1| Length = 152 Score = 72.0 bits (175), Expect = 1e-12 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 6/101 (5%) Frame = +2 Query: 290 VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALA 469 V G L +++G D +K + +AI+G++YD T+ R FYGP GPY FAG DASR LA Sbjct: 39 VVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLA 97 Query: 470 KMSFEPQDLNGDTSGLGPF------ELDALQDWGVQFMSKY 574 SF+ + + P ++DAL +W F +KY Sbjct: 98 LNSFDLDVIKDWDQPIDPLDDLTKEQIDALDEWQEHFENKY 138
>GLPK_XANCP (Q8PDI0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 32.3 bits (72), Expect = 0.99 Identities = 24/77 (31%), Positives = 35/77 (45%) Frame = +2 Query: 302 EVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 481 E D E L D P + + ++Y +TQ++ FYG P A AG + + F Sbjct: 198 EWDAELLEMLDVPAQMLPEVRS-SSEVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACF 256 Query: 482 EPQDLNGDTSGLGPFEL 532 EP + +T G G F L Sbjct: 257 EP-GMAKNTYGTGCFML 272
>GLPK_XANAC (Q8PQG7) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +2 Query: 377 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPFEL 532 ++Y +TQ++ FYG P A AG + + FEP + +T G G F L Sbjct: 222 EVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACFEP-GMAKNTYGTGCFML 272
>GLPK_ENTFA (O34154) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 500 Score = 31.6 bits (70), Expect = 1.7 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +2 Query: 377 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPF 526 ++Y +T++ FYG P A AG + +M+FEP + +T G G F Sbjct: 221 EVYGLTKNYHFYGSEVPIAGMAGDQQAALFGQMAFEP-GMVKNTYGTGSF 269
>Y3770_BACSK (Q5WBF8) UPF0271 protein ABC3770| Length = 253 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 329 YDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDT 508 Y+ + + L AI +YDV + +FYG G + AGK A A F + D Sbjct: 116 YNMAAADQALAEAIANAVYDVDPNLVFYGLAGSALIAAGKKAGLKTASEVFADRTYQADG 175 Query: 509 S 511 S Sbjct: 176 S 176
>GLPK_LACLA (Q9CG64) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 498 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +2 Query: 377 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPF 526 ++Y VT+ F+G P + AG + +M+FEP + +T G G F Sbjct: 223 EVYGVTKGFHFFGSEVPISGMAGDQQAALFGQMAFEPGMIK-NTYGTGSF 271
>DX26B_MOUSE (Q8BND4) Protein DDX26B| Length = 861 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Frame = -2 Query: 548 SLVVRRARTAQGPKYHRSGPGARKTSWLELCWRLCQR-IGHK----VHQVH 411 SL++RRA+TA H G G SW C L + GH +H H Sbjct: 628 SLLLRRAQTAPTVTNHVGGKGPLSASWFPSCPSLVKHTFGHPDTTVIHDTH 678 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,505,272 Number of Sequences: 219361 Number of extensions: 1033002 Number of successful extensions: 3229 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3217 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
