ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart40e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468420.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.49
2gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
3gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
4gb|AC125213.3| Mus musculus BAC clone RP23-136A14 from 7, comple... 44 0.49
5emb|AL513304.27| Human DNA sequence from clone RP11-398B16 on ch... 44 0.49
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
8dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
9gb|AF131216.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTB-... 42 1.9
10gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, comp... 42 1.9
11emb|CT010581.10| Mouse DNA sequence from clone RP23-104J14 on ch... 42 1.9
12gb|DQ068068.1| Uncultured bacterium BAC17H8, complete sequence 42 1.9
13gb|AC154814.2| Mus musculus BAC clone RP24-532L22 from 16, compl... 42 1.9
14emb|CR956397.19| Pig DNA sequence from clone CH242-259E5 on chro... 42 1.9
15ref|XM_472010.1| Oryza sativa (japonica cultivar-group), predic... 40 7.7
16gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 7.7
17gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, co... 40 7.7
18gb|AC135672.4| Mus musculus BAC clone RP23-449K22 from chromosom... 40 7.7
19emb|CR376773.7| Zebrafish DNA sequence from clone CH211-23E22 in... 40 7.7
20gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, comple... 40 7.7
21gb|AC162462.6| Mus musculus chromosome 3, clone RP23-55M9, compl... 40 7.7
22gb|AY328081.1| Mus musculus transcription factor PAX7 (Pax7) gen... 40 7.7
23gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 7.7
24gb|AC114295.2| Homo sapiens chromosome 5 clone RP11-115A1, compl... 40 7.7
25gb|AC158572.3| Mus musculus chromosome 7, clone RP24-402J3, comp... 40 7.7
26emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4,... 40 7.7
27emb|AJ854486.1| Human adenovirus type 9 complete genome 40 7.7
28gb|AC183530.3| Pan troglodytes BAC clone CH251-653K11 from chrom... 40 7.7
29gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold 40 7.7
30gb|AC079329.15| Homo sapiens chromosome 11, clone RP11-265D17, c... 40 7.7
31gb|AC104236.2| Homo sapiens chromosome 15, clone RP11-24J19, com... 40 7.7
32gb|AC027216.6| Homo sapiens chromosome 18, clone RP11-440L16, co... 40 7.7
33gb|AY875648.1| Human adenovirus type 46, complete genome 40 7.7
34gb|S82508.1| Human adenovirus type 9 E4 protein (E4), Orf2, Orf3... 40 7.7
35gb|AC021843.6|AC021843 Homo sapiens chromosome 18, clone RP11-71... 40 7.7
36emb|BX465227.3| Zebrafish DNA sequence from clone RP71-40K24 in ... 40 7.7
37dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
38dbj|D32064.2| Homo sapiens ogdh gene for 2-oxoglutarate dehydrog... 40 7.7
39gb|AC097503.2| Homo sapiens BAC clone RP11-356P4 from 2, complet... 40 7.7
40gb|AC020974.4|AC020974 Mus musculus chromosome 18 clone RP23-92D... 40 7.7
41dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 7.7
42dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.7
43emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 i... 40 7.7
44emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on ch... 40 7.7
45emb|BX649264.4| Zebrafish DNA sequence from clone CH211-260K9 in... 40 7.7
46gb|AF108105.1|AF108105 Human adenovirus type 17 complete genome 40 7.7
47gb|DQ196108.1| Chlamydomonas reinhardtii pherophorin-C2 protein ... 40 7.7
48gb|L39241.1|HS5K17EMB Murine cytomegalovirus strain K17E glycopr... 40 7.7 
>ref|XM_468420.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1470

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 463  cgcacatcacctcctcctcccccgtc 488
            |||||||| |||||||||||||||||
Sbjct: 1235 cgcacatctcctcctcctcccccgtc 1260
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>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09,
              complete sequence
          Length = 167318

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 472    cctcctcctcccccgtcgccga 493
              ||||||||||||||||||||||
Sbjct: 154922 cctcctcctcccccgtcgccga 154901
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>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12,
             complete sequence
          Length = 121293

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 472   cctcctcctcccccgtcgccga 493
             ||||||||||||||||||||||
Sbjct: 25717 cctcctcctcccccgtcgccga 25696
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>gb|AC125213.3| Mus musculus BAC clone RP23-136A14 from 7, complete sequence
          Length = 194309

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 132   tcctcgcacccacccaccctac 153
             ||||||||||||||||||||||
Sbjct: 99968 tcctcgcacccacccaccctac 99989
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>emb|AL513304.27| Human DNA sequence from clone RP11-398B16 on chromosome 10 Contains part
              of the gene for double-stranded RNA specific adenosine
              deaminase (ADAR3), a novel gene and two CpG islands,
              complete sequence
          Length = 163243

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 8      tccatccactcccaatccatccatct 33
              ||||||||||| ||||||||||||||
Sbjct: 106411 tccatccactcacaatccatccatct 106436



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 8      tccatccactcccaatccatccatct 33
              ||||||||||| ||||||||||||||
Sbjct: 105958 tccatccactcacaatccatccatct 105983
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 472      cctcctcctcccccgtcgccga 493
                ||||||||||||||||||||||
Sbjct: 17894968 cctcctcctcccccgtcgccga 17894947
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 463      cgcacatcacctcctcctcccccgtc 488
                |||||||| |||||||||||||||||
Sbjct: 35138178 cgcacatctcctcctcctcccccgtc 35138153
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1202_E07
          Length = 145014

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 463   cgcacatcacctcctcctcccccgtc 488
             |||||||| |||||||||||||||||
Sbjct: 33534 cgcacatctcctcctcctcccccgtc 33509
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>gb|AF131216.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTB-164D9, CTB-169o5,
              CTB-65D4, CTC-271o23, CTC-367J24, complete sequence; and
              clones CTC-493P15, CTB-91N18, partial sequence
          Length = 321261

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 191    ttcttcctccctgatccctcc 211
              |||||||||||||||||||||
Sbjct: 185993 ttcttcctccctgatccctcc 185973
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>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence
          Length = 357655

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 203    gatccctccgcctccaccggc 223
              |||||||||||||||||||||
Sbjct: 155317 gatccctccgcctccaccggc 155337
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>emb|CT010581.10| Mouse DNA sequence from clone RP23-104J14 on chromosome 16, complete
             sequence
          Length = 218225

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 170   tcctcccccaccccatctaccttct 194
             ||||||||||||||||| |||||||
Sbjct: 30311 tcctcccccaccccatccaccttct 30287
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>gb|DQ068068.1| Uncultured bacterium BAC17H8, complete sequence
          Length = 135294

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 361   agatgctggttgacggcgccg 381
             |||||||||||||||||||||
Sbjct: 22805 agatgctggttgacggcgccg 22825
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>gb|AC154814.2| Mus musculus BAC clone RP24-532L22 from 16, complete sequence
          Length = 155332

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 170   tcctcccccaccccatctaccttct 194
             ||||||||||||||||| |||||||
Sbjct: 48388 tcctcccccaccccatccaccttct 48364
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>emb|CR956397.19| Pig DNA sequence from clone CH242-259E5 on chromosome 17, complete
            sequence
          Length = 177531

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 347  ctgcttctccaccaagatgctggtt 371
            |||||||||||||||| ||||||||
Sbjct: 3808 ctgcttctccaccaagctgctggtt 3832
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>ref|XM_472010.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1902

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 cctccgcctccaccggcccc 226
           ||||||||||||||||||||
Sbjct: 140 cctccgcctccaccggcccc 159
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 398     cgaggcgctgccgccggagatgct 421
               ||||||||||||||| ||||||||
Sbjct: 1751336 cgaggcgctgccgcccgagatgct 1751313
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>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence
          Length = 203120

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 164   ccttcgtcctcccccaccccatct 187
             |||| |||||||||||||||||||
Sbjct: 32072 ccttggtcctcccccaccccatct 32049
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>gb|AC135672.4| Mus musculus BAC clone RP23-449K22 from chromosome 9, complete
            sequence
          Length = 162356

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 164  ccttcgtcctcccccaccccatct 187
            |||| |||||||||||||||||||
Sbjct: 7735 ccttggtcctcccccaccccatct 7758
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>emb|CR376773.7| Zebrafish DNA sequence from clone CH211-23E22 in linkage group 17,
              complete sequence
          Length = 167088

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tcccaatccatccatctcca 36
              ||||||||||||||||||||
Sbjct: 140223 tcccaatccatccatctcca 140242



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tcccaatccatccatctcca 36
              ||||||||||||||||||||
Sbjct: 140184 tcccaatccatccatctcca 140203



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tcccaatccatccatctcca 36
              ||||||||||||||||||||
Sbjct: 139738 tcccaatccatccatctcca 139757
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>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence
          Length = 178530

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ccttcctccactccatcctc 136
              ||||||||||||||||||||
Sbjct: 166064 ccttcctccactccatcctc 166083
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>gb|AC162462.6| Mus musculus chromosome 3, clone RP23-55M9, complete sequence
          Length = 191456

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    tcctcccccaccccatctac 189
              ||||||||||||||||||||
Sbjct: 159942 tcctcccccaccccatctac 159923
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>gb|AY328081.1| Mus musculus transcription factor PAX7 (Pax7) gene, promoter region
            and partial cds
          Length = 13352

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  cctcccccaccccatctacc 190
            ||||||||||||||||||||
Sbjct: 7449 cctcccccaccccatctacc 7430
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    cggcgccggcggcaccacgc 393
              ||||||||||||||||||||
Sbjct: 241691 cggcgccggcggcaccacgc 241710
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>gb|AC114295.2| Homo sapiens chromosome 5 clone RP11-115A1, complete sequence
          Length = 87978

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   gtgaagttcccccactgctt 352
             ||||||||||||||||||||
Sbjct: 57041 gtgaagttcccccactgctt 57022
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>gb|AC158572.3| Mus musculus chromosome 7, clone RP24-402J3, complete sequence
          Length = 171722

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      cactccatccactcccaatc 24
              ||||||||||||||||||||
Sbjct: 145686 cactccatccactcccaatc 145667
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>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02,
             complete sequence
          Length = 172435

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   cctccgcctccaccggcccc 226
             ||||||||||||||||||||
Sbjct: 96104 cctccgcctccaccggcccc 96123
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>emb|AJ854486.1| Human adenovirus type 9 complete genome
          Length = 35083

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   cctgccaccgccccctctga 313
             ||||||||||||||||||||
Sbjct: 33435 cctgccaccgccccctctga 33416
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>gb|AC183530.3| Pan troglodytes BAC clone CH251-653K11 from chromosome 1, complete
             sequence
          Length = 198127

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tcttcctccctgatccctcc 211
             ||||||||||||||||||||
Sbjct: 41283 tcttcctccctgatccctcc 41302
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>gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold
          Length = 359132

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    cccccaccccatctaccttc 193
              ||||||||||||||||||||
Sbjct: 205078 cccccaccccatctaccttc 205059
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>gb|AC079329.15| Homo sapiens chromosome 11, clone RP11-265D17, complete sequence
          Length = 156540

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   accccatctaccttcttcct 198
             ||||||||||||||||||||
Sbjct: 52000 accccatctaccttcttcct 51981
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>gb|AC104236.2| Homo sapiens chromosome 15, clone RP11-24J19, complete sequence
          Length = 160392

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ccactcccaatccatccatc 32
             ||||||||||||||||||||
Sbjct: 72942 ccactcccaatccatccatc 72923
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>gb|AC027216.6| Homo sapiens chromosome 18, clone RP11-440L16, complete sequence
          Length = 170843

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     ccatccatctccaccctgcc 43
              ||||||||||||||||||||
Sbjct: 157946 ccatccatctccaccctgcc 157927
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>gb|AY875648.1| Human adenovirus type 46, complete genome
          Length = 35178

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   cctgccaccgccccctctga 313
             ||||||||||||||||||||
Sbjct: 33540 cctgccaccgccccctctga 33521
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>gb|S82508.1| Human adenovirus type 9 E4 protein (E4), Orf2, Orf3, Orf4, and Orf6
            genes, complete cds; and Orf7 gene, partial cds
          Length = 3119

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  cctgccaccgccccctctga 313
            ||||||||||||||||||||
Sbjct: 1648 cctgccaccgccccctctga 1667
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>gb|AC021843.6|AC021843 Homo sapiens chromosome 18, clone RP11-713C1, complete sequence
          Length = 159480

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    ccatccatctccaccctgcc 43
             ||||||||||||||||||||
Sbjct: 55317 ccatccatctccaccctgcc 55336
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>emb|BX465227.3| Zebrafish DNA sequence from clone RP71-40K24 in linkage group 17,
             complete sequence
          Length = 161395

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     tccatccactcccaatccatccat 31
             ||||||| ||||||||||||||||
Sbjct: 53574 tccatcccctcccaatccatccat 53551



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     tccatccactcccaatccatccat 31
             ||||||| ||||||||||||||||
Sbjct: 53356 tccatcccctcccaatccatccat 53333
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 207      cctccgcctccaccggcccc 226
                ||||||||||||||||||||
Sbjct: 16566871 cctccgcctccaccggcccc 16566890
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>dbj|D32064.2| Homo sapiens ogdh gene for 2-oxoglutarate dehydrogenase, complete cds
          Length = 33851

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ggcgccggcggcaccacgcc 394
             ||||||||||||||||||||
Sbjct: 19144 ggcgccggcggcaccacgcc 19125
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>gb|AC097503.2| Homo sapiens BAC clone RP11-356P4 from 2, complete sequence
          Length = 88520

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 117  ccttcctccactccatcctc 136
            ||||||||||||||||||||
Sbjct: 6706 ccttcctccactccatcctc 6725
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>gb|AC020974.4|AC020974 Mus musculus chromosome 18 clone RP23-92D17, complete sequence
          Length = 162639

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    tcttcctccctgatccctcc 211
              ||||||||||||||||||||
Sbjct: 104217 tcttcctccctgatccctcc 104236
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 374     cggcgccggcggcaccacgc 393
               ||||||||||||||||||||
Sbjct: 3699175 cggcgccggcggcaccacgc 3699194
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 398     cgaggcgctgccgccggaga 417
               ||||||||||||||||||||
Sbjct: 5339483 cgaggcgctgccgccggaga 5339464
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>emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 in linkage group 6,
              complete sequence
          Length = 167320

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tcccaatccatccatctcca 36
              ||||||||||||||||||||
Sbjct: 117122 tcccaatccatccatctcca 117141



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tcccaatccatccatctcca 36
              ||||||||||||||||||||
Sbjct: 117083 tcccaatccatccatctcca 117102



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tcccaatccatccatctcca 36
              ||||||||||||||||||||
Sbjct: 116637 tcccaatccatccatctcca 116656
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>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete
             sequence
          Length = 175199

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   cctcccccaccccatctacc 190
             ||||||||||||||||||||
Sbjct: 15423 cctcccccaccccatctacc 15442
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>emb|BX649264.4| Zebrafish DNA sequence from clone CH211-260K9 in linkage group 20,
              complete sequence
          Length = 194320

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     caatccatccatctccaccc 39
              ||||||||||||||||||||
Sbjct: 138590 caatccatccatctccaccc 138571
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>gb|AF108105.1|AF108105 Human adenovirus type 17 complete genome
          Length = 35100

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   cctgccaccgccccctctga 313
             ||||||||||||||||||||
Sbjct: 33464 cctgccaccgccccctctga 33445
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>gb|DQ196108.1| Chlamydomonas reinhardtii pherophorin-C2 protein precursor, mRNA,
            complete cds
          Length = 2562

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 472  cctcctcctcccccgtcgcc 491
            ||||||||||||||||||||
Sbjct: 1150 cctcctcctcccccgtcgcc 1169



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 472  cctcctcctcccccgtcgcc 491
            ||||||||||||||||||||
Sbjct: 1018 cctcctcctcccccgtcgcc 1037
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>gb|L39241.1|HS5K17EMB Murine cytomegalovirus strain K17E glycoprotein B (gB) gene,
           partial cds
          Length = 240

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 cggagatgctcagggagctc 431
           ||||||||||||||||||||
Sbjct: 221 cggagatgctcagggagctc 240


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,864,121
Number of Sequences: 3902068
Number of extensions: 5864121
Number of successful extensions: 124803
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124239
Number of HSP's gapped (non-prelim): 564
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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