ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart40c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468759.1| Oryza sativa (japonica cultivar-group), mRNA 357 3e-95
2dbj|AK061895.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
3dbj|AK101293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
4gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome... 161 3e-36
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 161 3e-36
6gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genom... 161 3e-36
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
8dbj|AK061415.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
10dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
11gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 44 0.49
12gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.9
13gb|AC004994.1| Homo sapiens PAC clone RP5-1194E15 from 7, comple... 42 1.9
14gb|AC142310.1| Pan troglodytes BAC clone RP43-45P13 from 7, comp... 42 1.9
15emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.9
16emb|BX640420.1| Bordetella pertussis strain Tohama I, complete g... 42 1.9
17gb|AE005929.1| Caulobacter crescentus CB15 section 255 of 359 of... 42 1.9
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
19dbj|AP004821.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
20dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
21ref|XM_310575.2| Anopheles gambiae str. PEST ENSANGP00000007405 ... 42 1.9
22ref|XM_474445.1| Oryza sativa (japonica cultivar-group), predic... 40 7.6
23ref|NM_187495.1| Oryza sativa (japonica cultivar-group), predic... 40 7.6
24ref|XM_462671.1| Oryza sativa (japonica cultivar-group), predic... 40 7.6
25ref|XM_473726.1| Oryza sativa (japonica cultivar-group), predic... 40 7.6
26gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 7.6
27gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 7.6
28gb|AC149221.2| Mus musculus BAC clone RP23-402P22 from chromosom... 40 7.6
29gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 7.6
30gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 7.6
31gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 7.6
32gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 7.6
33gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosom... 40 7.6
34gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 7.6
35gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.6
36emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.6
37emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4,... 40 7.6
38emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207... 40 7.6
39emb|CR861335.1| Pongo pygmaeus mRNA; cDNA DKFZp459K2011 (from cl... 40 7.6
40gb|BC076161.1| Danio rerio zgc:109930, mRNA (cDNA clone MGC:9267... 40 7.6
41gb|AY044131.1| Drosophila hypocausta alcohol dehydrogenase (Adh)... 40 7.6
42gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 7.6
43dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 7.6
44gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.6
45gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
46ref|NM_001024436.1| Danio rerio zgc:109930 (zgc:109930), mRNA 40 7.6
47gb|BC095058.1| Danio rerio zgc:109930, mRNA (cDNA clone MGC:1099... 40 7.6
48dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
49gb|AE004908.1| Pseudomonas aeruginosa PAO1, section 469 of 529 o... 40 7.6
50gb|AE004802.1| Pseudomonas aeruginosa PAO1, section 363 of 529 o... 40 7.6
51gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, co... 40 7.6
52gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, c... 40 7.6
53dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
54gb|AF231346.1|AF231346 Ziphius cavirostris von Willebrand factor... 40 7.6
55dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.6
56dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
57dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
58emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 7.6
59emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.6
60tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 7.6
61emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.6
62gb|AF056321.1|AF056321 Actinomyces naeslundii urease gamma subun... 40 7.6
63gb|AF048784.1|AF048784 Actinomyces naeslundii urease accessory p... 40 7.6
64emb|AJ891095.1| Lepilemur edwardsi partial vwf gene for Von Will... 40 7.6
65emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4,... 40 7.6
66emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 40 7.6
67gb|U31619.1|PCU31619 Procavia capensis von Willebrand factor (vW... 40 7.6 
>ref|XM_468759.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1279

 Score =  357 bits (180), Expect = 3e-95
 Identities = 378/444 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 gaagaagaaggtcatcatcgacaccgacccagggatcgacgacgccatggccatcttcgc 160
           |||||||||| || |||||||||||||||| || ||||| ||||||||||||||||||| 
Sbjct: 80  gaagaagaagctcgtcatcgacaccgacccgggaatcgatgacgccatggccatcttcgt 139

                                                                       
Query: 161 ggcgctgaggtcgccggagctggaggtggttggcctcaccaccatcttcggcaacgtcta 220
           ||||||||||||||||||| ||||| || | |||||||||||||||||||||||||||||
Sbjct: 140 ggcgctgaggtcgccggaggtggagctgctgggcctcaccaccatcttcggcaacgtcta 199

                                                                       
Query: 221 caccgccctcgccacccgcaacgcgctgcacctcctggagaccgctgggaggaccgacat 280
           |||| ||||||||||||||||||| || ||||| |||||| | | ||||||||| |||||
Sbjct: 200 caccaccctcgccacccgcaacgccctccacctgctggaggctgttgggaggactgacat 259

                                                                       
Query: 281 ccccgtcgcggaggggtcccatgtaacaatcaagaaagccaccaagctacggattgccag 340
           |||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 260 ccccgtggcagagggatcccatgtaacaatcaagaaagccaccaagctacggattgcgag 319

                                                                       
Query: 341 cttcgtccacggttcggatggcctcggcaaccagaacttccctccgccggccggcaaggc 400
           ||| || || || |||||||| || || || |||||||| ||||||||  | || ||| |
Sbjct: 320 ctttgttcatggctcggatggtctaggaaatcagaactttcctccgccaactgggaagcc 379

                                                                       
Query: 401 ggtggaccagtccgccgccgccttccttgtcgagcaggcgaacctctaccccggacaagt 460
             | || || || |||||||| || |||||||||||||| || || ||||| ||||||||
Sbjct: 380 cttagatcaatcggccgccgcgtttcttgtcgagcaggcaaatctgtaccctggacaagt 439

                                                                       
Query: 461 aaccgtcgtcgccctcggccccctcaccaaccttgcgctggccgtcgagcttgacccttc 520
            || || || ||||| || || || |||||||| ||  ||||  | || ||||| |||||
Sbjct: 440 tactgtggttgcccttggtccacttaccaacctagctttggctatagaacttgatccttc 499

                                   
Query: 521 tttcccccagaagattgggcagat 544
           ||||||  ||||||||||||||||
Sbjct: 500 tttcccgaagaagattgggcagat 523
to top
>dbj|AK061895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G08, full
           insert sequence
          Length = 1321

 Score =  357 bits (180), Expect = 3e-95
 Identities = 378/444 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 gaagaagaaggtcatcatcgacaccgacccagggatcgacgacgccatggccatcttcgc 160
           |||||||||| || |||||||||||||||| || ||||| ||||||||||||||||||| 
Sbjct: 122 gaagaagaagctcgtcatcgacaccgacccgggaatcgatgacgccatggccatcttcgt 181

                                                                       
Query: 161 ggcgctgaggtcgccggagctggaggtggttggcctcaccaccatcttcggcaacgtcta 220
           ||||||||||||||||||| ||||| || | |||||||||||||||||||||||||||||
Sbjct: 182 ggcgctgaggtcgccggaggtggagctgctgggcctcaccaccatcttcggcaacgtcta 241

                                                                       
Query: 221 caccgccctcgccacccgcaacgcgctgcacctcctggagaccgctgggaggaccgacat 280
           |||| ||||||||||||||||||| || ||||| |||||| | | ||||||||| |||||
Sbjct: 242 caccaccctcgccacccgcaacgccctccacctgctggaggctgttgggaggactgacat 301

                                                                       
Query: 281 ccccgtcgcggaggggtcccatgtaacaatcaagaaagccaccaagctacggattgccag 340
           |||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 302 ccccgtggcagagggatcccatgtaacaatcaagaaagccaccaagctacggattgcgag 361

                                                                       
Query: 341 cttcgtccacggttcggatggcctcggcaaccagaacttccctccgccggccggcaaggc 400
           ||| || || || |||||||| || || || |||||||| ||||||||  | || ||| |
Sbjct: 362 ctttgttcatggctcggatggtctaggaaatcagaactttcctccgccaactgggaagcc 421

                                                                       
Query: 401 ggtggaccagtccgccgccgccttccttgtcgagcaggcgaacctctaccccggacaagt 460
             | || || || |||||||| || |||||||||||||| || || ||||| ||||||||
Sbjct: 422 cttagatcaatcggccgccgcgtttcttgtcgagcaggcaaatctgtaccctggacaagt 481

                                                                       
Query: 461 aaccgtcgtcgccctcggccccctcaccaaccttgcgctggccgtcgagcttgacccttc 520
            || || || ||||| || || || |||||||| ||  ||||  | || ||||| |||||
Sbjct: 482 tactgtggttgcccttggtccacttaccaacctagctttggctatagaacttgatccttc 541

                                   
Query: 521 tttcccccagaagattgggcagat 544
           ||||||  ||||||||||||||||
Sbjct: 542 tttcccgaagaagattgggcagat 565
to top
>dbj|AK101293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G23, full
           insert sequence
          Length = 1359

 Score =  357 bits (180), Expect = 3e-95
 Identities = 378/444 (85%)
 Strand = Plus / Plus

                                                                       
Query: 101 gaagaagaaggtcatcatcgacaccgacccagggatcgacgacgccatggccatcttcgc 160
           |||||||||| || |||||||||||||||| || ||||| ||||||||||||||||||| 
Sbjct: 162 gaagaagaagctcgtcatcgacaccgacccgggaatcgatgacgccatggccatcttcgt 221

                                                                       
Query: 161 ggcgctgaggtcgccggagctggaggtggttggcctcaccaccatcttcggcaacgtcta 220
           ||||||||||||||||||| ||||| || | |||||||||||||||||||||||||||||
Sbjct: 222 ggcgctgaggtcgccggaggtggagctgctgggcctcaccaccatcttcggcaacgtcta 281

                                                                       
Query: 221 caccgccctcgccacccgcaacgcgctgcacctcctggagaccgctgggaggaccgacat 280
           |||| ||||||||||||||||||| || ||||| |||||| | | ||||||||| |||||
Sbjct: 282 caccaccctcgccacccgcaacgccctccacctgctggaggctgttgggaggactgacat 341

                                                                       
Query: 281 ccccgtcgcggaggggtcccatgtaacaatcaagaaagccaccaagctacggattgccag 340
           |||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 342 ccccgtggcagagggatcccatgtaacaatcaagaaagccaccaagctacggattgcgag 401

                                                                       
Query: 341 cttcgtccacggttcggatggcctcggcaaccagaacttccctccgccggccggcaaggc 400
           ||| || || || |||||||| || || || |||||||| ||||||||  | || ||| |
Sbjct: 402 ctttgttcatggctcggatggtctaggaaatcagaactttcctccgccaactgggaagcc 461

                                                                       
Query: 401 ggtggaccagtccgccgccgccttccttgtcgagcaggcgaacctctaccccggacaagt 460
             | || || || |||||||| || |||||||||||||| || || ||||| ||||||||
Sbjct: 462 cttagatcaatcggccgccgcgtttcttgtcgagcaggcaaatctgtaccctggacaagt 521

                                                                       
Query: 461 aaccgtcgtcgccctcggccccctcaccaaccttgcgctggccgtcgagcttgacccttc 520
            || || || ||||| || || || |||||||| ||  ||||  | || ||||| |||||
Sbjct: 522 tactgtggttgcccttggtccacttaccaacctagctttggctatagaacttgatccttc 581

                                   
Query: 521 tttcccccagaagattgggcagat 544
           ||||||  ||||||||||||||||
Sbjct: 582 tttcccgaagaagattgggcagat 605
to top
>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0032H19 map E30331S, complete sequence
          Length = 164820

 Score =  161 bits (81), Expect = 3e-36
 Identities = 105/113 (92%)
 Strand = Plus / Plus

                                                                        
Query: 141  gacgccatggccatcttcgcggcgctgaggtcgccggagctggaggtggttggcctcacc 200
            ||||||||||||||||||| ||||||||||||||||||| ||||| || | |||||||||
Sbjct: 3288 gacgccatggccatcttcgtggcgctgaggtcgccggaggtggagctgctgggcctcacc 3347

                                                                 
Query: 201  accatcttcggcaacgtctacaccgccctcgccacccgcaacgcgctgcacct 253
            |||||||||||||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 3348 accatcttcggcaacgtctacaccaccctcgccacccgcaacgccctccacct 3400



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 147/182 (80%)
 Strand = Plus / Plus

                                                                        
Query: 312  aagaaagccaccaagctacggattgccagcttcgtccacggttcggatggcctcggcaac 371
            |||||||||||||||||||||||||| ||||| || || || |||||||| || || || 
Sbjct: 3889 aagaaagccaccaagctacggattgcgagctttgttcatggctcggatggtctaggaaat 3948

                                                                        
Query: 372  cagaacttccctccgccggccggcaaggcggtggaccagtccgccgccgccttccttgtc 431
            |||||||| ||||||||  | || ||| |  | || || || |||||||| || ||||||
Sbjct: 3949 cagaactttcctccgccaactgggaagcccttagatcaatcggccgccgcgtttcttgtc 4008

                                                                        
Query: 432  gagcaggcgaacctctaccccggacaagtaaccgtcgtcgccctcggccccctcaccaac 491
            |||||||| || || ||||| |||||||| || || || ||||| || || || ||||||
Sbjct: 4009 gagcaggcaaatctgtaccctggacaagttactgtggttgcccttggtccacttaccaac 4068

              
Query: 492  ct 493
            ||
Sbjct: 4069 ct 4070



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                             
Query: 266  tgggaggaccgacatccccgtcgcggaggggtcccatgtaacaatcaag 314
            ||||||||| ||||||||||| || ||||| ||||||||||||||||||
Sbjct: 3557 tgggaggactgacatccccgtggcagagggatcccatgtaacaatcaag 3605



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 510  cttgacccttctttcccccagaagattgggcagat 544
            ||||| |||||||||||  ||||||||||||||||
Sbjct: 4186 cttgatccttctttcccgaagaagattgggcagat 4220



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 101  gaagaagaaggtcatcatcgacaccgaccc 130
            |||||||||| || ||||||||||||||||
Sbjct: 3153 gaagaagaagctcgtcatcgacaccgaccc 3182
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  161 bits (81), Expect = 3e-36
 Identities = 105/113 (92%)
 Strand = Plus / Minus

                                                                            
Query: 141      gacgccatggccatcttcgcggcgctgaggtcgccggagctggaggtggttggcctcacc 200
                ||||||||||||||||||| ||||||||||||||||||| ||||| || | |||||||||
Sbjct: 17560455 gacgccatggccatcttcgtggcgctgaggtcgccggaggtggagctgctgggcctcacc 17560396

                                                                     
Query: 201      accatcttcggcaacgtctacaccgccctcgccacccgcaacgcgctgcacct 253
                |||||||||||||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 17560395 accatcttcggcaacgtctacaccaccctcgccacccgcaacgccctccacct 17560343



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                            
Query: 312      aagaaagccaccaagctacggattgccagcttcgtccacggttcggatggcctcggcaac 371
                |||||||||||||||||||||||||| ||||| || || || |||||||| || || || 
Sbjct: 17559854 aagaaagccaccaagctacggattgcgagctttgttcatggctcggatggtctaggaaat 17559795

                                                                            
Query: 372      cagaacttccctccgccggccggcaaggcggtggaccagtccgccgccgccttccttgtc 431
                |||||||| ||||||||  | || ||| |  | || || || |||||||| || ||||||
Sbjct: 17559794 cagaactttcctccgccaactgggaagcccttagatcaatcggccgccgcgtttcttgtc 17559735

                                                                            
Query: 432      gagcaggcgaacctctaccccggacaagtaaccgtcgtcgccctcggccccctcaccaac 491
                |||||||| || || ||||| |||||||| || || || ||||| || || || ||||||
Sbjct: 17559734 gagcaggcaaatctgtaccctggacaagttactgtggttgcccttggtccacttaccaac 17559675

                  
Query: 492      ct 493
                ||
Sbjct: 17559674 ct 17559673



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                 
Query: 266      tgggaggaccgacatccccgtcgcggaggggtcccatgtaacaatcaag 314
                ||||||||| ||||||||||| || ||||| ||||||||||||||||||
Sbjct: 17560186 tgggaggactgacatccccgtggcagagggatcccatgtaacaatcaag 17560138



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 510      cttgacccttctttcccccagaagattgggcagat 544
                ||||| |||||||||||  ||||||||||||||||
Sbjct: 17559557 cttgatccttctttcccgaagaagattgggcagat 17559523



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 101      gaagaagaaggtcatcatcgacaccgaccc 130
                |||||||||| || ||||||||||||||||
Sbjct: 17560590 gaagaagaagctcgtcatcgacaccgaccc 17560561



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 194     cctcaccaccatcttcggca 213
               ||||||||||||||||||||
Sbjct: 8979261 cctcaccaccatcttcggca 8979242
to top
>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete
             sequence
          Length = 97152

 Score =  161 bits (81), Expect = 3e-36
 Identities = 105/113 (92%)
 Strand = Plus / Plus

                                                                         
Query: 141   gacgccatggccatcttcgcggcgctgaggtcgccggagctggaggtggttggcctcacc 200
             ||||||||||||||||||| ||||||||||||||||||| ||||| || | |||||||||
Sbjct: 94622 gacgccatggccatcttcgtggcgctgaggtcgccggaggtggagctgctgggcctcacc 94681

                                                                  
Query: 201   accatcttcggcaacgtctacaccgccctcgccacccgcaacgcgctgcacct 253
             |||||||||||||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 94682 accatcttcggcaacgtctacaccaccctcgccacccgcaacgccctccacct 94734



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 147/182 (80%)
 Strand = Plus / Plus

                                                                         
Query: 312   aagaaagccaccaagctacggattgccagcttcgtccacggttcggatggcctcggcaac 371
             |||||||||||||||||||||||||| ||||| || || || |||||||| || || || 
Sbjct: 95223 aagaaagccaccaagctacggattgcgagctttgttcatggctcggatggtctaggaaat 95282

                                                                         
Query: 372   cagaacttccctccgccggccggcaaggcggtggaccagtccgccgccgccttccttgtc 431
             |||||||| ||||||||  | || ||| |  | || || || |||||||| || ||||||
Sbjct: 95283 cagaactttcctccgccaactgggaagcccttagatcaatcggccgccgcgtttcttgtc 95342

                                                                         
Query: 432   gagcaggcgaacctctaccccggacaagtaaccgtcgtcgccctcggccccctcaccaac 491
             |||||||| || || ||||| |||||||| || || || ||||| || || || ||||||
Sbjct: 95343 gagcaggcaaatctgtaccctggacaagttactgtggttgcccttggtccacttaccaac 95402

               
Query: 492   ct 493
             ||
Sbjct: 95403 ct 95404



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                              
Query: 266   tgggaggaccgacatccccgtcgcggaggggtcccatgtaacaatcaag 314
             ||||||||| ||||||||||| || ||||| ||||||||||||||||||
Sbjct: 94891 tgggaggactgacatccccgtggcagagggatcccatgtaacaatcaag 94939



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 510   cttgacccttctttcccccagaagattgggcagat 544
             ||||| |||||||||||  ||||||||||||||||
Sbjct: 95520 cttgatccttctttcccgaagaagattgggcagat 95554



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 101   gaagaagaaggtcatcatcgacaccgaccc 130
             |||||||||| || ||||||||||||||||
Sbjct: 94487 gaagaagaagctcgtcatcgacaccgaccc 94516
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  161 bits (81), Expect = 3e-36
 Identities = 105/113 (92%)
 Strand = Plus / Minus

                                                                            
Query: 141      gacgccatggccatcttcgcggcgctgaggtcgccggagctggaggtggttggcctcacc 200
                ||||||||||||||||||| ||||||||||||||||||| ||||| || | |||||||||
Sbjct: 17553996 gacgccatggccatcttcgtggcgctgaggtcgccggaggtggagctgctgggcctcacc 17553937

                                                                     
Query: 201      accatcttcggcaacgtctacaccgccctcgccacccgcaacgcgctgcacct 253
                |||||||||||||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 17553936 accatcttcggcaacgtctacaccaccctcgccacccgcaacgccctccacct 17553884



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                            
Query: 312      aagaaagccaccaagctacggattgccagcttcgtccacggttcggatggcctcggcaac 371
                |||||||||||||||||||||||||| ||||| || || || |||||||| || || || 
Sbjct: 17553395 aagaaagccaccaagctacggattgcgagctttgttcatggctcggatggtctaggaaat 17553336

                                                                            
Query: 372      cagaacttccctccgccggccggcaaggcggtggaccagtccgccgccgccttccttgtc 431
                |||||||| ||||||||  | || ||| |  | || || || |||||||| || ||||||
Sbjct: 17553335 cagaactttcctccgccaactgggaagcccttagatcaatcggccgccgcgtttcttgtc 17553276

                                                                            
Query: 432      gagcaggcgaacctctaccccggacaagtaaccgtcgtcgccctcggccccctcaccaac 491
                |||||||| || || ||||| |||||||| || || || ||||| || || || ||||||
Sbjct: 17553275 gagcaggcaaatctgtaccctggacaagttactgtggttgcccttggtccacttaccaac 17553216

                  
Query: 492      ct 493
                ||
Sbjct: 17553215 ct 17553214



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                 
Query: 266      tgggaggaccgacatccccgtcgcggaggggtcccatgtaacaatcaag 314
                ||||||||| ||||||||||| || ||||| ||||||||||||||||||
Sbjct: 17553727 tgggaggactgacatccccgtggcagagggatcccatgtaacaatcaag 17553679



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 510      cttgacccttctttcccccagaagattgggcagat 544
                ||||| |||||||||||  ||||||||||||||||
Sbjct: 17553098 cttgatccttctttcccgaagaagattgggcagat 17553064



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 101      gaagaagaaggtcatcatcgacaccgaccc 130
                |||||||||| || ||||||||||||||||
Sbjct: 17554131 gaagaagaagctcgtcatcgacaccgaccc 17554102



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 194     cctcaccaccatcttcggca 213
               ||||||||||||||||||||
Sbjct: 8977096 cctcaccaccatcttcggca 8977077
to top
>dbj|AK061415.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D09, full
           insert sequence
          Length = 1329

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 106 agaaggtcatcatcgacaccgacccagggatcga 139
           ||||||||||||||||||| || |||||||||||
Sbjct: 150 agaaggtcatcatcgacacggatccagggatcga 183



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 195 ctcaccaccatcttcggcaac 215
           |||||||||||||||||||||
Sbjct: 239 ctcaccaccatcttcggcaac 259
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 106      agaaggtcatcatcgacaccgacccagggatcg 138
                ||||||||||||||||||| || ||||||||||
Sbjct: 22378720 agaaggtcatcatcgacacggatccagggatcg 22378688



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 195      ctcaccaccatcttcggcaac 215
                |||||||||||||||||||||
Sbjct: 22378535 ctcaccaccatcttcggcaac 22378515
to top
>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1003_C09
          Length = 124746

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 106   agaaggtcatcatcgacaccgacccagggatcg 138
             ||||||||||||||||||| || ||||||||||
Sbjct: 15209 agaaggtcatcatcgacacggatccagggatcg 15177



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 195   ctcaccaccatcttcggcaac 215
             |||||||||||||||||||||
Sbjct: 15024 ctcaccaccatcttcggcaac 15004
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 223    ccgccctcgccacccgcaacgcgctg 248
              |||||||||||| |||||||||||||
Sbjct: 409793 ccgccctcgccagccgcaacgcgctg 409768
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 224     cgccctcgccacccgcaacgcgctg 248
               ||||| |||||||||||||||||||
Sbjct: 3328106 cgcccgcgccacccgcaacgcgctg 3328130
to top
>gb|AC004994.1| Homo sapiens PAC clone RP5-1194E15 from 7, complete sequence
          Length = 80331

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 297   tcccatgtaacaatcaagaaa 317
             |||||||||||||||||||||
Sbjct: 62195 tcccatgtaacaatcaagaaa 62175
to top
>gb|AC142310.1| Pan troglodytes BAC clone RP43-45P13 from 7, complete sequence
          Length = 197471

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 297    tcccatgtaacaatcaagaaa 317
              |||||||||||||||||||||
Sbjct: 102013 tcccatgtaacaatcaagaaa 101993
to top
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 420    gccttccttgtcgagcaggcg 440
              |||||||||||||||||||||
Sbjct: 100559 gccttccttgtcgagcaggcg 100539
to top
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12
          Length = 348134

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 420    gccttccttgtcgagcaggcg 440
              |||||||||||||||||||||
Sbjct: 278786 gccttccttgtcgagcaggcg 278766
to top
>gb|AE005929.1| Caulobacter crescentus CB15 section 255 of 359 of the complete genome
          Length = 13698

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 112  tcatcatcgacaccgacccagggatcgacgacgccatggcc 152
            ||||| |||||||||| || || ||||||||||| ||||||
Sbjct: 3395 tcatcttcgacaccgatcccggcatcgacgacgcgatggcc 3435
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 166      tgaggtcgccggagctggagg 186
                |||||||||||||||||||||
Sbjct: 16248612 tgaggtcgccggagctggagg 16248592



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 194      cctcaccaccatcttcggca 213
                ||||||||||||||||||||
Sbjct: 28853937 cctcaccaccatcttcggca 28853918
to top
>dbj|AP004821.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0676G08
          Length = 153154

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    tgaggtcgccggagctggagg 186
              |||||||||||||||||||||
Sbjct: 125019 tgaggtcgccggagctggagg 124999
to top
>dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0008D07
          Length = 156874

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   tgaggtcgccggagctggagg 186
             |||||||||||||||||||||
Sbjct: 10689 tgaggtcgccggagctggagg 10669
to top
>ref|XM_310575.2| Anopheles gambiae str. PEST ENSANGP00000007405
           (ENSANGG00000005590), partial mRNA
          Length = 1329

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 gaggtggttggcctcaccacc 203
           |||||||||||||||||||||
Sbjct: 256 gaggtggttggcctcaccacc 276
to top
>ref|XM_474445.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 caccgccctcgccacccgcaacgc 244
           ||||||||||||||||||| ||||
Sbjct: 426 caccgccctcgccacccgcgacgc 449
to top
>ref|NM_187495.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2442

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  cctcaccaccatcttcggca 213
            ||||||||||||||||||||
Sbjct: 2319 cctcaccaccatcttcggca 2338
to top
>ref|XM_462671.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2331

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  cctcaccaccatcttcggca 213
            ||||||||||||||||||||
Sbjct: 2208 cctcaccaccatcttcggca 2227
to top
>ref|XM_473726.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2331

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  cctcaccaccatcttcggca 213
            ||||||||||||||||||||
Sbjct: 2208 cctcaccaccatcttcggca 2227
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 426     cttgtcgagcaggcgaacctctac 449
               |||||||||||||||||| |||||
Sbjct: 1426115 cttgtcgagcaggcgaacgtctac 1426138
to top
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 473     cctcggccccctcaccaacc 492
               ||||||||||||||||||||
Sbjct: 2610136 cctcggccccctcaccaacc 2610117
to top
>gb|AC149221.2| Mus musculus BAC clone RP23-402P22 from chromosome 7, complete sequence
          Length = 202580

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   ggagctggaggtggttggcc 195
             ||||||||||||||||||||
Sbjct: 26940 ggagctggaggtggttggcc 26921
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    tggccatcttcgcggcgctg 167
              ||||||||||||||||||||
Sbjct: 660147 tggccatcttcgcggcgctg 660128
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 426     cttgtcgagcaggcgaacctctac 449
               |||||||||||||||||| |||||
Sbjct: 2652227 cttgtcgagcaggcgaacgtctac 2652250
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 417     gccgccttccttgtcgagcaggcg 440
               ||||||||||||||| ||||||||
Sbjct: 3307645 gccgccttccttgtccagcaggcg 3307668
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 463     ccgtcgtcgccctcggcccc 482
               ||||||||||||||||||||
Sbjct: 1408971 ccgtcgtcgccctcggcccc 1408952
to top
>gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosome 7, complete sequence
          Length = 229312

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    ggagctggaggtggttggcc 195
              ||||||||||||||||||||
Sbjct: 190655 ggagctggaggtggttggcc 190636
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    gccttccttgtcgagcaggc 439
              ||||||||||||||||||||
Sbjct: 967851 gccttccttgtcgagcaggc 967870
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      ttcttctccacctcgctcga 33
               ||||||||||||||||||||
Sbjct: 3279267 ttcttctccacctcgctcga 3279286
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 426     cttgtcgagcaggcgaacctctac 449
               |||||||||||||||||| |||||
Sbjct: 1731243 cttgtcgagcaggcgaacgtctac 1731220
to top
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01,
             complete sequence
          Length = 143157

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   cctcaccaccatcttcggca 213
             ||||||||||||||||||||
Sbjct: 83503 cctcaccaccatcttcggca 83484
to top
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome
          Length = 124321

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 221   caccgccctcgccacccgcaacgc 244
             ||||||||||||||||||| ||||
Sbjct: 85189 caccgccctcgccacccgcgacgc 85212
to top
>emb|CR861335.1| Pongo pygmaeus mRNA; cDNA DKFZp459K2011 (from clone DKFZp459K2011)
          Length = 2344

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  ccacctcgctcgatccgcccgcgc 44
           |||||||||||||||||| |||||
Sbjct: 221 ccacctcgctcgatccgcgcgcgc 198
to top
>gb|BC076161.1| Danio rerio zgc:109930, mRNA (cDNA clone MGC:92677 IMAGE:7073820),
           complete cds
          Length = 958

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 150 gccatcttcgcggcgctgag 169
           ||||||||||||||||||||
Sbjct: 51  gccatcttcgcggcgctgag 32
to top
>gb|AY044131.1| Drosophila hypocausta alcohol dehydrogenase (Adh) gene, exons 2 and
           3 and partial cds
          Length = 723

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 195 ctcaccaccatcttcggcaa 214
           ||||||||||||||||||||
Sbjct: 130 ctcaccaccatcttcggcaa 149
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 461     aaccgtcgtcgccctcggcc 480
               ||||||||||||||||||||
Sbjct: 1470789 aaccgtcgtcgccctcggcc 1470808
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 388     cggccggcaaggcggtggac 407
               ||||||||||||||||||||
Sbjct: 4038349 cggccggcaaggcggtggac 4038330
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     catggccgccgtcaccaaga 102
              ||||||||||||||||||||
Sbjct: 386711 catggccgccgtcaccaaga 386730
to top
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09,
              complete sequence
          Length = 143595

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    cctcaccaccatcttcggca 213
              ||||||||||||||||||||
Sbjct: 104122 cctcaccaccatcttcggca 104103
to top
>ref|NM_001024436.1| Danio rerio zgc:109930 (zgc:109930), mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 150 gccatcttcgcggcgctgag 169
           ||||||||||||||||||||
Sbjct: 164 gccatcttcgcggcgctgag 145
to top
>gb|BC095058.1| Danio rerio zgc:109930, mRNA (cDNA clone MGC:109930 IMAGE:7245400),
           complete cds
          Length = 1065

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 150 gccatcttcgcggcgctgag 169
           ||||||||||||||||||||
Sbjct: 164 gccatcttcgcggcgctgag 145
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 221      caccgccctcgccacccgcaacgc 244
                ||||||||||||||||||| ||||
Sbjct: 35228283 caccgccctcgccacccgcgacgc 35228260



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 194      cctcaccaccatcttcggca 213
                ||||||||||||||||||||
Sbjct: 30104524 cctcaccaccatcttcggca 30104505



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 194      cctcaccaccatcttcggca 213
                ||||||||||||||||||||
Sbjct: 30043821 cctcaccaccatcttcggca 30043802
to top
>gb|AE004908.1| Pseudomonas aeruginosa PAO1, section 469 of 529 of the complete genome
          Length = 12551

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   ctggccgtcgagcttgaccc 517
             ||||||||||||||||||||
Sbjct: 11083 ctggccgtcgagcttgaccc 11064
to top
>gb|AE004802.1| Pseudomonas aeruginosa PAO1, section 363 of 529 of the complete
            genome
          Length = 10623

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   tcgatccgcccgcgcaaccg 49
            ||||||||||||||||||||
Sbjct: 5301 tcgatccgcccgcgcaaccg 5282
to top
>gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, complete sequence
          Length = 163597

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 249    cacctcctggagaccgctgggagg 272
              |||||||||||||| |||||||||
Sbjct: 129539 cacctcctggagacagctgggagg 129562
to top
>gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, complete sequence
          Length = 174914

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 249    cacctcctggagaccgctgggagg 272
              |||||||||||||| |||||||||
Sbjct: 174139 cacctcctggagacagctgggagg 174116
to top
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_H09
          Length = 110086

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   cctcaccaccatcttcggca 213
             ||||||||||||||||||||
Sbjct: 71980 cctcaccaccatcttcggca 71961
to top
>gb|AF231346.1|AF231346 Ziphius cavirostris von Willebrand factor gene, partial cds
          Length = 1237

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  aagaagaagaaggtcatcat 118
           ||||||||||||||||||||
Sbjct: 503 aagaagaagaaggtcatcat 522
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 20      tccacctcgctcgatccgcccgcgcaac 47
               |||||||||| || ||||||||||||||
Sbjct: 1077803 tccacctcgcacgctccgcccgcgcaac 1077830
to top
>dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132H20, full
           insert sequence
          Length = 1413

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 caccgccctcgccacccgcaacgc 244
           ||||||||||||||||||| ||||
Sbjct: 529 caccgccctcgccacccgcgacgc 552
to top
>dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032B08, full
            insert sequence
          Length = 3800

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 221  caccgccctcgccacccgcaacgc 244
            ||||||||||||||||||| ||||
Sbjct: 3017 caccgccctcgccacccgcgacgc 3040
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    gatcgacgacgccatggcca 153
              ||||||||||||||||||||
Sbjct: 792032 gatcgacgacgccatggcca 792013
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 417     gccgccttccttgtcgagcaggcg 440
               |||| |||||||||||||||||||
Sbjct: 3353344 gccggcttccttgtcgagcaggcg 3353321
to top
>tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx60 gene for
           class III peroxidase 60 precursor, exons 1-3
          Length = 1221

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 caccgccctcgccacccgcaacgc 244
           ||||||||||||||||||| ||||
Sbjct: 519 caccgccctcgccacccgcgacgc 542
to top
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete
             sequence
          Length = 82895

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 221   caccgccctcgccacccgcaacgc 244
             ||||||||||||||||||| ||||
Sbjct: 71858 caccgccctcgccacccgcgacgc 71835
to top
>gb|AF056321.1|AF056321 Actinomyces naeslundii urease gamma subunit UreA (ureA), urease beta
            subunit UreB (ureB), urease alpha subunit UreC (ureC),
            urease accessory protein UreE (ureE), urease accessory
            protein UreF (ureF), urease accessory protein UreG
            (ureG), and urease accessory protein UreD (ureD) genes,
            complete cds
          Length = 5482

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   tccatggccgccgtcaccaa 100
            ||||||||||||||||||||
Sbjct: 3935 tccatggccgccgtcaccaa 3954
to top
>gb|AF048784.1|AF048784 Actinomyces naeslundii urease accessory protein (ureG) gene,
           complete cds
          Length = 681

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  tccatggccgccgtcaccaa 100
           ||||||||||||||||||||
Sbjct: 160 tccatggccgccgtcaccaa 179
to top
>emb|AJ891095.1| Lepilemur edwardsi partial vwf gene for Von Willebrand factor
           precursor
          Length = 1197

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  aagaagaagaaggtcatcat 118
           ||||||||||||||||||||
Sbjct: 481 aagaagaagaaggtcatcat 500
to top
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12,
           complete sequence
          Length = 186142

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 194 cctcaccaccatcttcggca 213
           ||||||||||||||||||||
Sbjct: 935 cctcaccaccatcttcggca 916
to top
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
             complete sequence
          Length = 173770

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 221   caccgccctcgccacccgcaacgc 244
             ||||||||||||||||||| ||||
Sbjct: 24128 caccgccctcgccacccgcgacgc 24105
to top
>gb|U31619.1|PCU31619 Procavia capensis von Willebrand factor (vWF) gene, partial cds
          Length = 1278

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  aagaagaagaaggtcatcat 118
           ||||||||||||||||||||
Sbjct: 530 aagaagaagaaggtcatcat 549


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,282,464
Number of Sequences: 3902068
Number of extensions: 5282464
Number of successful extensions: 98680
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96016
Number of HSP's gapped (non-prelim): 2661
length of query: 559
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 536
effective length of database: 17,143,297,704
effective search space: 9188807569344
effective search space used: 9188807569344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top