| Clone Name | bart38g06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor | 45 | 1e-04 | 2 | UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor | 45 | 1e-04 | 3 | UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein... | 42 | 0.001 | 4 | FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor... | 30 | 3.7 | 5 | NDVA_RHIME (P18767) Beta-(1-->2)glucan export ATP-binding protei... | 30 | 6.4 |
|---|
>UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor| Length = 286 Score = 45.4 bits (106), Expect = 1e-04 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%) Frame = +3 Query: 150 SYCDGST--YAPNSPFQASLSLVAAALPGNASSMPSGFATADAGTSPSRAYAMALCRGDV 323 ++C+ S+ + N+ + +L+ + + L +S + + G + M LC GDV Sbjct: 32 TFCNDSSGNFTRNTTYNTNLNTLLSTLSNQSSF--ANYYNLTTGLGSDTVHGMFLCIGDV 89 Query: 324 NASTCDXXXXXXXXXXXXQENCPNNTGATIYEDACVLRFSTLQFLDFL 467 N +TC+ +NC N+ A IY +C++R+S FL L Sbjct: 90 NRTTCNACVKNATIEIA--KNCTNHREAIIYYFSCMVRYSDKFFLSTL 135
>UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor| Length = 287 Score = 45.1 bits (105), Expect = 1e-04 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 3/118 (2%) Frame = +3 Query: 180 NSPFQASLSLVAAALPGNASSMPSGFATADAGTSPSRAYAMALCRGDVNASTCDXXXXXX 359 N+ + +L+ + + L +S + + G + + M LC GDVN +TC+ Sbjct: 43 NTTYNKNLNTLLSTLSNQSSF--ANYYNLTTGLASDTVHGMFLCTGDVNRTTCNACVKNA 100 Query: 360 XXXXXXQENCPNNTGATIYEDACVLRFSTLQFLDFLRADQ---WQPRELAFQISQAFG 524 +NC N+ A IY C++R+S FL L + W +L I ++FG Sbjct: 101 TIEIA--KNCTNHREAIIYNVDCMVRYSDKFFLTTLETNPSYWWSSNDL---IPKSFG 153
>UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein 3 precursor| Length = 287 Score = 42.4 bits (98), Expect = 0.001 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 2/106 (1%) Frame = +3 Query: 147 DSYCDGSTY--APNSPFQASLSLVAAALPGNASSMPSGFATADAGTSPSRAYAMALCRGD 320 D++C S+ N+ + +L+ + + N SS+ + + G + Y M LC GD Sbjct: 34 DTFCIDSSRNTTGNTTYNKNLNTMLSTFR-NQSSIVNNY-NLTTGLASDTVYGMFLCTGD 91 Query: 321 VNASTCDXXXXXXXXXXXXQENCPNNTGATIYEDACVLRFSTLQFL 458 VN +TC+ +NC N+ A IY C++R+S FL Sbjct: 92 VNITTCNNCVKNATIEIV--KNCTNHREAIIYYIDCMVRYSDKFFL 135
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = +3 Query: 177 PNSPFQASLSLVAAALPGNASSMPSGFATADAGTSPS 287 PNSPF + ++L AA L + SS P A D SPS Sbjct: 60 PNSPFSSQVAL-AAILLSSISSSPLALAVVDEPASPS 95
>NDVA_RHIME (P18767) Beta-(1-->2)glucan export ATP-binding protein ndvA| Length = 616 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = +3 Query: 438 FSTLQFLDFLR-ADQWQPRELAFQISQAFGNVTSVPAAWFSAAATS 572 F+T+ F+ R AD+ A +++AFG + S+P +W S TS Sbjct: 99 FNTIAFVLVSREADRLAHGRRASLLTEAFGRIVSMPLSWHSQRGTS 144 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,380,969 Number of Sequences: 219361 Number of extensions: 707981 Number of successful extensions: 2091 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2035 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2087 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)