ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38g05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY839295.1| Hordeum vulgare thaumatin-like protein TLP5 mRNA, complete cds Length = 918 Score = 1078 bits (544), Expect = 0.0 Identities = 579/591 (97%) Strand = Plus / Plus Query: 1 accatattcacaaacaagaacggcacaagccatggcgttctccggcgtcgtccacctcat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13 accatattcacaaacaagaacggcacaagccatggcgttctccggcgtcgtccacctcat 72 Query: 61 cgctctcgtgatcgcggccgctgccgctgccaccgatgcgaccaccataaccgtggtgaa 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 cgctctcgtgatcgcggtcgctgccgctgccaccgatgcgaccaccataaccgtggtgaa 132 Query: 121 ccggtgctcctacacgatatggccaggcgcgctcccaggcggcggcgcgcgtctcgtccc 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 133 ccggtgctcctatacgatatggccaggcgcgctcccaggcggcggcgcgcgtctcgatcc 192 Query: 181 gggccagtcgtggcagctcaacatgcccgcgggcacggcgggcgccagggtgtggccgcg 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 193 gggccagtcgtggcagctcaatatgcccgcgggcacggcgggcgccagggtgtggccgcg 252 Query: 241 cacggggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcgcggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 cacggggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcgcggg 312 Query: 301 cgctctggtctgccgcgtgtccggcgagcagccagccacgctggccgagtacacgctcgg 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 313 cgctctggtctgccgcgtgtccggcgagcagccagccacgctggccgagtacacgctggg 372 Query: 361 ccagggcgggaaccgggactttttcgacctgtccgtcatagacgggttcaatgtgcccat 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 gcagggcgggaaccgggactttttcgacctgtccgtcatagacgggttcaatgtgcccat 432 Query: 421 gagcttccagcccgtcggcggcgcgccgtgccgcgcggctacctgcgccgtggacatcac 480 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 433 gagcttccagcccgtcggcggcgcaccgtgccgcgcggctacctgcgccgtggacatcac 492 Query: 481 ccatgagtgtctgccggagctgcaggtgcccggagggtgcgcgagcgcgtgcggncagtt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 493 ccatgagtgtctgccggagctgcaggtgcccggagggtgcgcgagcgcgtgcggcaagtt 552 Query: 541 tggcggcgacacctactgctgtcgtggccagttcgagcacaactgcccgcc 591 ||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 553 tggcggcgacacctactgctgccggggccagttcgagcacaactgcccgcc 603
>gb|AF442967.1| Triticum aestivum clone WAS-3a thaumatin-like protein mRNA, complete cds Length = 925 Score = 490 bits (247), Expect = e-135 Identities = 437/500 (87%), Gaps = 3/500 (0%) Strand = Plus / Plus Query: 95 gatgcgaccaccataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctc 154 |||||| ||||||| ||||| || ||||| |||||||||||| | ||||| ||||||||| Sbjct: 127 gatgcggccaccatcaccgtcgtcaaccgttgctcctacacggtgtggccgggcgcgctc 186 Query: 155 ccaggcggcggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggc 214 ||||||||||||| |||||||| |||||||||||| ||| ||| ||||||||||| ||| Sbjct: 187 ccaggcggcggcgtgcgtctcgacccgggccagtcttgggcgctgaacatgcccgccggc 246 Query: 215 acggcgggcgccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggc 274 || |||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| Sbjct: 247 accgcgggcgccagggtgtggccgcgcaccgggtgcaccttcgacggcagcggccggggc 306 Query: 275 cggtgcatcaccggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagcca 334 ||||||||||| |||||||||| ||| | |||| |||| | ||||||||| ||||||| Sbjct: 307 cggtgcatcacgggcgactgcggcggcacgctggcctgcagggtgtccggccagcagccc 366 Query: 335 gccacgctggccgagtacacgctcggccagggcgggaaccgggactttttcgacctgtcc 394 ||||||||||||||||||| || ||||||||||||||| |||||| |||||||||||| Sbjct: 367 accacgctggccgagtacaccctgggccagggcgggaacaaggacttcttcgacctgtcc 426 Query: 395 gtcatagacgggttcaatgtgcccatgagcttccagcccgtcggcggcgcgccgtgccgc 454 ||||| ||||||||||| |||||||||| |||| ||||||||||||| || |||||| Sbjct: 427 gtcatcgacgggttcaacgtgcccatgaacttcgagcccgtcggcggttcg---tgccgc 483 Query: 455 gcggctacctgcgccgtggacatcacccatgagtgtctgccggagctgcaggtgcccgga 514 || || ||||||| |||||||||| | ||||| || ||||||||||||||||||| Sbjct: 484 gctgcgcgctgcgccacggacatcaccaaggagtgcctcaaggagctgcaggtgcccgga 543 Query: 515 gggtgcgcgagcgcgtgcggncagtttggcggcgacacctactgctgtcgtggccagttc 574 |||||||||||||||||||| | || |||||||||||||| ||||| || ||||||||| Sbjct: 544 gggtgcgcgagcgcgtgcggcaaattcggcggcgacacctattgctgccggggccagttc 603 Query: 575 gagcacaactgcccgccgac 594 |||||||||||||||||||| Sbjct: 604 gagcacaactgcccgccgac 623
>gb|AF355457.1|AF355457 Hordeum vulgare thaumatin-like protein TLP7 mRNA, complete cds Length = 967 Score = 462 bits (233), Expect = e-127 Identities = 430/495 (86%), Gaps = 7/495 (1%) Strand = Plus / Plus Query: 102 ccaccataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcg 161 ||||||| ||||| || |||||||||||||||||| | ||||| |||||||||||||| | Sbjct: 129 ccaccatcaccgtcgtcaaccggtgctcctacacggtgtggccgggcgcgctcccaggtg 188 Query: 162 gcggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggcacggcgg 221 |||||| |||||||| ||| |||||||||||| || |||||||| || ||||| |||| Sbjct: 189 gcggcgtgcgtctcgacccaggccagtcgtgggctctgaacatgccggccggcaccgcgg 248 Query: 222 gcgccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgca 281 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 249 gcgccagggtgtggccgcgcacggggtgcaccttcgacggcagcggccgtggccggtgca 308 Query: 282 tcaccggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagccacgc 341 ||||||| ||||||| ||||| |||| ||||||||||||||| ||||||| ||||| Sbjct: 309 tcaccggagactgcggcggcgcgctggcatgccgcgtgtccggccagcagcccaccacgt 368 Query: 342 tggccgagtacacgctcggccagggcgggaaccgggactttttcgacctgtccgtcatag 401 ||||||||||||| || || ||||||| |||| |||||| ||||||||||||||||| | Sbjct: 369 tggccgagtacaccctgggacagggcgcgaacaaggacttcttcgacctgtccgtcatcg 428 Query: 402 acgggttcaatgtgcccatgagcttccagcccgtcg--gcggcgcgccgtgccgcgcggc 459 |||||||||| || |||||||||||| ||||||||| ||| || ||||||| |||||| Sbjct: 429 acgggttcaacgttcccatgagcttcgagcccgtcggcgcgtcgtgccgtgctgcgcgg- 487 Query: 460 tacctgcgccgtggacatcacccatgagtgtctgccggagctgcaggtgcccggagggtg 519 || ||| |||||||||| | ||||| || ||||||||||||||| |||||||| Sbjct: 488 ----tgtgccacggacatcaccaaggagtgcctcaaggagctgcaggtgccgggagggtg 543 Query: 520 cgcgagcgcgtgcggncagtttggcggcgacacctactgctgtcgtggccagttcgagca 579 ||||||||||||||| |||| |||||||||||||||||||| || |||||||||||||| Sbjct: 544 cgcgagcgcgtgcggcaagttcggcggcgacacctactgctgccggggccagttcgagca 603 Query: 580 caactgcccgccgac 594 |||||| |||||||| Sbjct: 604 caactgtccgccgac 618
>gb|AF016327.1|AF016327 Hordeum vulgare Barperm1 (perm1) mRNA, partial cds Length = 616 Score = 458 bits (231), Expect = e-125 Identities = 428/493 (86%), Gaps = 7/493 (1%) Strand = Plus / Plus Query: 104 accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163 ||||| ||||| || |||||||||||||||||| | ||||| |||||||||||||| ||| Sbjct: 10 accatcaccgtcgtcaaccggtgctcctacacggtgtggccgggcgcgctcccaggtggc 69 Query: 164 ggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223 |||| |||||||| ||| |||||||||||| || |||||||| || ||||| |||||| Sbjct: 70 ggcgtgcgtctcgacccaggccagtcgtgggctctgaacatgccggccggcaccgcgggc 129 Query: 224 gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatc 283 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130 gccagggtgtggccgcgcacggggtgcaccttcgacggcagcggccgtggccggtgcatc 189 Query: 284 accggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagccacgctg 343 ||||| ||||||| ||||| |||| ||||||||||||||| ||||||| ||||| || Sbjct: 190 accggagactgcggcggcgcgctggcatgccgcgtgtccggccagcagcccaccacgttg 249 Query: 344 gccgagtacacgctcggccagggcgggaaccgggactttttcgacctgtccgtcatagac 403 ||||||||||| || || ||||||| |||| |||||| ||||||||||||||||| ||| Sbjct: 250 gccgagtacaccctgggacagggcgcgaacaaggacttcttcgacctgtccgtcatcgac 309 Query: 404 gggttcaatgtgcccatgagcttccagcccgtcg--gcggcgcgccgtgccgcgcggcta 461 |||||||| || |||||||||||| ||||||||| ||| || ||||||| |||||| Sbjct: 310 gggttcaacgttcccatgagcttcgagcccgtcggcgcgtcgtgccgtgctgcgcgg--- 366 Query: 462 cctgcgccgtggacatcacccatgagtgtctgccggagctgcaggtgcccggagggtgcg 521 || ||| |||||||||| | ||||| || ||||||||||||||| |||||||||| Sbjct: 367 --tgtgccacggacatcaccaaggagtgcctcaaggagctgcaggtgccgggagggtgcg 424 Query: 522 cgagcgcgtgcggncagtttggcggcgacacctactgctgtcgtggccagttcgagcaca 581 ||||||||||||| |||| |||||||||||||||||||| || |||||||||||||||| Sbjct: 425 cgagcgcgtgcggcaagttcggcggcgacacctactgctgccggggccagttcgagcaca 484 Query: 582 actgcccgccgac 594 |||| |||||||| Sbjct: 485 actgtccgccgac 497
>gb|AF355456.1|AF355456 Hordeum vulgare thaumatin-like protein TLP6 mRNA, complete cds Length = 921 Score = 448 bits (226), Expect = e-123 Identities = 427/493 (86%), Gaps = 6/493 (1%) Strand = Plus / Plus Query: 102 ccaccataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcg 161 ||||||| ||||| || |||||||||||||||||| | ||||| ||||||||||| || | Sbjct: 162 ccaccatcaccgtcgtcaaccggtgctcctacacggtgtggccgggcgcgctcccgggtg 221 Query: 162 gcggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggcacggcgg 221 |||| | |||||||| ||| |||||||||||| ||| ||||||||||||||||| |||| Sbjct: 222 gcggtgtgcgtctcgacccaggccagtcgtgggcgctgaacatgcccgcgggcaccgcgg 281 Query: 222 gcgccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgca 281 |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| Sbjct: 282 gcgccagggtgtggccgcgcaccgggtgcaccttcgacggcagcggccgcggccggtgca 341 Query: 282 tcaccggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagccacgc 341 |||| ||||||||| |||| |||| ||||| ||||||||| ||||||| |||||| Sbjct: 342 tcacgggcgactgcaacggcgtgctggcatgccgggtgtccggccagcagccgaccacgc 401 Query: 342 tggccgagtacacgctcggccagggcgggaaccgggactttttcgacctgtccgtcatag 401 ||||||||||||| || |||||||||| |||| |||||| ||||||||||||||||| | Sbjct: 402 tggccgagtacaccctgggccagggcgcgaacaaggacttcttcgacctgtccgtcatcg 461 Query: 402 acgggttcaatgtgcccatgagcttccagcccgtcggcggcgcgccgtgccgcgcggcta 461 |||||||||| ||||| ||||||||| ||||||| || || | ||||||| |||||| Sbjct: 462 acgggttcaacgtgccgatgagcttcgagcccgtgggagg-gtgccgtgctgcgcgg--- 517 Query: 462 cctgcgccgtggacatcacccatgagtgtctgccggagctgcaggtgcccggagggtgcg 521 |||||| |||||||||| | || || || ||||||||||||||| |||||||||| Sbjct: 518 --tgcgccacggacatcaccaaggattgcctcaaggagctgcaggtgccgggagggtgcg 575 Query: 522 cgagcgcgtgcggncagtttggcggcgacacctactgctgtcgtggccagttcgagcaca 581 ||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||| Sbjct: 576 cgagcgcgtgcggcaagttcggcggcgacacctactgctgccgtggccagtttgagcaca 635 Query: 582 actgcccgccgac 594 ||||||||||||| Sbjct: 636 actgcccgccgac 648
>emb|AJ001268.1|HVPATHPR5 Hordeum vulgare mRNA for basic pathogenesis-related protein, PR5 Length = 867 Score = 412 bits (208), Expect = e-112 Identities = 423/493 (85%), Gaps = 9/493 (1%) Strand = Plus / Plus Query: 102 ccaccataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcg 161 ||||||| ||||| || |||||||||||||||||| | ||||| ||||||||||| || | Sbjct: 92 ccaccatcaccgtcgtcaaccggtgctcctacacggtgtggccgggcgcgctcccgggtg 151 Query: 162 gcggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggcacggcgg 221 |||| | |||||||| ||| |||||||||||| ||| |||||||||||||| || |||| Sbjct: 152 gcggtgtgcgtctcgacccaggccagtcgtgggcgctgaacatgcccgcgggtaccgcgg 211 Query: 222 gcgccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgca 281 |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| Sbjct: 212 gcgccagggtgtggccgcgcaccgggtgcaccttcgacggcagcggccgcggccggtgca 271 Query: 282 tcaccggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagccacgc 341 |||||||||||||| || | |||| ||||| ||||||||| ||||||| |||||| Sbjct: 272 tcaccggcgactgcaacggtgtgctggcatgccgggtgtccggccagcagccgaccacgc 331 Query: 342 tggccgagtacacgctcggccagggcgggaaccgggactttttcgacctgtccgtcatag 401 ||||||||||||| || |||||||||| |||| |||||| ||||||||||||||||| | Sbjct: 332 tggccgagtacaccctgggccagggcgcgaacaaggacttcttcgacctgtccgtcatcg 391 Query: 402 acgggttcaatgtgcccatgagcttccagcccgtcggcggcgcgccgtgccgcgcggcta 461 |||||||||| ||||| ||||||||| ||||||| || || | ||||||| |||||| Sbjct: 392 acgggttcaacgtgccgatgagcttcgagcccgtgggagg-gtgccgtgctgcgcgg--- 447 Query: 462 cctgcgccgtggacatcacccatgagtgtctgccggagctgcaggtgcccggagggtgcg 521 |||||| |||||||||| | || || || ||||||||||||||| |||||||||| Sbjct: 448 --tgcgccacggacatcaccaaggattgcctcaaggagctgcaggtgccgggagggtgcg 505 Query: 522 cgagcgcgtgcggncagtttggcggcgacacctactgctgtcgtggccagttcgagcaca 581 ||| ||||||| |||| |||||||||||||||||||| ||||||||||| ||||||| Sbjct: 506 cga---cgtgcggcaagttcggcggcgacacctactgctgccgtggccagtttgagcaca 562 Query: 582 actgcccgccgac 594 ||||||||||||| Sbjct: 563 actgcccgccgac 575
>gb|U57787.1|ASU57787 Avena sativa permatin precursor mRNA, complete cds Length = 846 Score = 377 bits (190), Expect = e-101 Identities = 411/485 (84%) Strand = Plus / Plus Query: 90 ccaccgatgcgaccaccataaccgtggtgaaccggtgctcctacacgatatggccaggcg 149 ||||||| ||| ||||||| ||||| || ||| ||||||||||||| | ||||| |||| Sbjct: 93 ccaccgacgcggccaccatcaccgtcgtcaacaagtgctcctacacggtgtggccgggcg 152 Query: 150 cgctcccaggcggcggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccg 209 ||||||| |||||||||| ||| || | ||||||| |||||||| |||||||||||| | Sbjct: 153 cgctcccgggcggcggcgtgcggctggacccgggcaagtcgtgggcgctcaacatgccgg 212 Query: 210 cgggcacggcgggcgccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggcc 269 |||| || |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 213 cggggacccggggcgccagggtgtggccgcgcacggggtgcaccttcgacgccagcggcc 272 Query: 270 gtggccggtgcatcaccggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagc 329 | || | ||| |||| |||||||||| ||||| |||| ||||||||||||||| ||| Sbjct: 273 gggggcactgcgtcacgggcgactgcggcggcgcgctggcctgccgcgtgtccgggcagc 332 Query: 330 agccagccacgctggccgagtacacgctcggccagggcgggaaccgggactttttcgacc 389 |||| || |||||||| ||||||||||||||| |||||||| | |||||| ||||||| Sbjct: 333 agccggcgacgctggcggagtacacgctcggcaagggcggggccaaggacttcttcgacc 392 Query: 390 tgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtcggcggcgcgccgt 449 | |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| ||| Sbjct: 393 tctccgtcatcgacgggttcaacgtgcccatgagcttccagcccgtgggcggcgcggcgt 452 Query: 450 gccgcgcggctacctgcgccgtggacatcacccatgagtgtctgccggagctgcaggtgc 509 |||| | || || ||||| | |||||||||| | |||| | || ||||||| |||| Sbjct: 453 gccggggcgcgacgtgcgcggcggacatcaccaagcagtgcccgcaggagctgaaggtcg 512 Query: 510 ccggagggtgcgcgagcgcgtgcggncagtttggcggcgacacctactgctgtcgtggcc 569 |||| |||||||| ||||||||||| |||| |||||||||||||||||||| || |||| Sbjct: 513 ccggcgggtgcgccagcgcgtgcggcaagttcggcggcgacacctactgctgccggggcc 572 Query: 570 agttc 574 ||||| Sbjct: 573 agttc 577
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 149 bits (75), Expect = 1e-32 Identities = 213/259 (82%) Strand = Plus / Minus Query: 104 accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163 ||||| ||| |||||||||| ||||| |||||| | ||||| ||||||||||| |||||| Sbjct: 139469 accatcaccatggtgaaccgctgctcgtacacggtgtggccgggcgcgctcccgggcggc 139410 Query: 164 ggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223 ||||| || |||| |||||| ||||||||| | ||| | | |||| ||||| ||| | Sbjct: 139409 ggcgcccggctcgacccggggcagtcgtggtcgatcagcgtcgccgccggcacaccggcc 139350 Query: 224 gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatc 283 |||||| | ||||||||||| || ||| |||||||| || |||||| ||||| ||| | Sbjct: 139349 gccaggatctggccgcgcaccggctgctccttcgacggcgccggccgcggccgctgcgcc 139290 Query: 284 accggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagccacgctg 343 || ||||||||||| ||||| ||| |||| ||| |||||||||| ||| |||||||| Sbjct: 139289 acgggcgactgcgccggcgcgctgtcctgcgccgtctccggcgagccgcccaccacgctg 139230 Query: 344 gccgagtacacgctcggcc 362 ||||||||||||||||||| Sbjct: 139229 gccgagtacacgctcggcc 139211 Score = 83.8 bits (42), Expect = 6e-13 Identities = 204/258 (79%) Strand = Plus / Plus Query: 104 accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163 ||||| || ||||||||||| ||| ||||||| | ||||| |||||||| || |||||| Sbjct: 119121 accatcacggtggtgaaccgctgccgctacacggtgtggccgggcgcgctgcccggcggc 119180 Query: 164 ggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223 |||| ||| |||| ||| ||| |||||||| ||||||| | |||| ||||| || | Sbjct: 119181 ggcgtgcggctcgacccaggcaagtcgtggacgctcaacgtcgccgccggcaccaaggcc 119240 Query: 224 gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatc 283 |||||| | ||||| ||||| || ||| ||||||| || |||||| ||||| ||| || Sbjct: 119241 gccaggatctggccccgcaccggctgcgacttcgacggcgccggccgcggccgctgcctc 119300 Query: 284 accggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagccacgctg 343 |||||||||||| ||| || |||| ||| ||||||| || ||| |||||||| Sbjct: 119301 accggcgactgccgcaacgcgctctcctgcgccgtctccggcgcgccgccgaccacgctg 119360 Query: 344 gccgagtacacgctcggc 361 |||||||||||||||||| Sbjct: 119361 gccgagtacacgctcggc 119378 Score = 69.9 bits (35), Expect = 9e-09 Identities = 73/86 (84%) Strand = Plus / Minus Query: 509 cccggagggtgcgcgagcgcgtgcggncagtttggcggcgacacctactgctgtcgtggc 568 ||||| || ||||| ||||||||||| |||| |||||||||||||||||||| || || Sbjct: 139043 cccggcggctgcgccagcgcgtgcggcaagttcggcggcgacacctactgctgccgggga 138984 Query: 569 cagttcgagcacaactgcccgccgac 594 | |||||||||| ||||||||||| Sbjct: 138983 cggttcgagcacgtgtgcccgccgac 138958 Score = 69.9 bits (35), Expect = 9e-09 Identities = 82/98 (83%) Strand = Plus / Plus Query: 497 gagctgcaggtgcccggagggtgcgcgagcgcgtgcggncagtttggcggcgacacctac 556 |||||| ||||| ||||||| |||| ||||||||||| |||| ||||||||| ||||| Sbjct: 119544 gagctgaaggtggccggaggctgcgacagcgcgtgcggcaagttcggcggcgacgcctac 119603 Query: 557 tgctgtcgtggccagttcgagcacaactgcccgccgac 594 ||||| || || ||| ||||||| | ||||||||||| Sbjct: 119604 tgctgccgggggaagtacgagcacgagtgcccgccgac 119641 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 383 ttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcc 432 ||||||||||| | || ||||||||||| ||||| |||||||||||||| Sbjct: 119415 ttcgacctgtcactgatcgacgggttcaacgtgccgatgagcttccagcc 119464 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 384 tcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcc 432 |||||||||| |||| ||||||||||| ||||| ||||||||||||| Sbjct: 139183 tcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttccagcc 139135 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 226 cagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcac 285 |||||||||| |||||||| |||| ||||||| || |||||||||| | ||| ||| Sbjct: 91609 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgtggcagctgcgccac 91550 Query: 286 cggcgactgcg 296 ||||||||||| Sbjct: 91549 cggcgactgcg 91539 Score = 44.1 bits (22), Expect = 0.52 Identities = 64/78 (82%) Strand = Plus / Minus Query: 226 cagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcac 285 |||||||||| |||||||| |||| ||||||| || |||||| ||| | ||| ||| Sbjct: 72111 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgcggcagctgcgccac 72052 Query: 286 cggcgactgcgcgggcgc 303 |||||||||||| ||||| Sbjct: 72051 cggcgactgcgccggcgc 72034 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Minus Query: 245 gggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcg 296 ||||||| ||||||| || |||||| ||| ||||| |||||||||||||| Sbjct: 115135 gggtgcagcttcgacggcgccggccgcggcaggtgcgccaccggcgactgcg 115084
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 149 bits (75), Expect = 1e-32 Identities = 213/259 (82%) Strand = Plus / Minus Query: 104 accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163 ||||| ||| |||||||||| ||||| |||||| | ||||| ||||||||||| |||||| Sbjct: 27017083 accatcaccatggtgaaccgctgctcgtacacggtgtggccgggcgcgctcccgggcggc 27017024 Query: 164 ggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223 ||||| || |||| |||||| ||||||||| | ||| | | |||| ||||| ||| | Sbjct: 27017023 ggcgcccggctcgacccggggcagtcgtggtcgatcagcgtcgccgccggcacaccggcc 27016964 Query: 224 gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatc 283 |||||| | ||||||||||| || ||| |||||||| || |||||| ||||| ||| | Sbjct: 27016963 gccaggatctggccgcgcaccggctgctccttcgacggcgccggccgcggccgctgcgcc 27016904 Query: 284 accggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagccacgctg 343 || ||||||||||| ||||| ||| |||| ||| |||||||||| ||| |||||||| Sbjct: 27016903 acgggcgactgcgccggcgcgctgtcctgcgccgtctccggcgagccgcccaccacgctg 27016844 Query: 344 gccgagtacacgctcggcc 362 ||||||||||||||||||| Sbjct: 27016843 gccgagtacacgctcggcc 27016825 Score = 83.8 bits (42), Expect = 6e-13 Identities = 204/258 (79%) Strand = Plus / Plus Query: 104 accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163 ||||| || ||||||||||| ||| ||||||| | ||||| |||||||| || |||||| Sbjct: 26995927 accatcacggtggtgaaccgctgccgctacacggtgtggccgggcgcgctgcccggcggc 26995986 Query: 164 ggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223 |||| ||| |||| ||| ||| |||||||| ||||||| | |||| ||||| || | Sbjct: 26995987 ggcgtgcggctcgacccaggcaagtcgtggacgctcaacgtcgccgccggcaccaaggcc 26996046 Query: 224 gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatc 283 |||||| | ||||| ||||| || ||| ||||||| || |||||| ||||| ||| || Sbjct: 26996047 gccaggatctggccccgcaccggctgcgacttcgacggcgccggccgcggccgctgcctc 26996106 Query: 284 accggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagccacgctg 343 |||||||||||| ||| || |||| ||| ||||||| || ||| |||||||| Sbjct: 26996107 accggcgactgccgcaacgcgctctcctgcgccgtctccggcgcgccgccgaccacgctg 26996166 Query: 344 gccgagtacacgctcggc 361 |||||||||||||||||| Sbjct: 26996167 gccgagtacacgctcggc 26996184 Score = 69.9 bits (35), Expect = 9e-09 Identities = 73/86 (84%) Strand = Plus / Minus Query: 509 cccggagggtgcgcgagcgcgtgcggncagtttggcggcgacacctactgctgtcgtggc 568 ||||| || ||||| ||||||||||| |||| |||||||||||||||||||| || || Sbjct: 27016657 cccggcggctgcgccagcgcgtgcggcaagttcggcggcgacacctactgctgccgggga 27016598 Query: 569 cagttcgagcacaactgcccgccgac 594 | |||||||||| ||||||||||| Sbjct: 27016597 cggttcgagcacgtgtgcccgccgac 27016572 Score = 69.9 bits (35), Expect = 9e-09 Identities = 82/98 (83%) Strand = Plus / Plus Query: 497 gagctgcaggtgcccggagggtgcgcgagcgcgtgcggncagtttggcggcgacacctac 556 |||||| ||||| ||||||| |||| ||||||||||| |||| ||||||||| ||||| Sbjct: 26996350 gagctgaaggtggccggaggctgcgacagcgcgtgcggcaagttcggcggcgacgcctac 26996409 Query: 557 tgctgtcgtggccagttcgagcacaactgcccgccgac 594 ||||| || || ||| ||||||| | ||||||||||| Sbjct: 26996410 tgctgccgggggaagtacgagcacgagtgcccgccgac 26996447 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 383 ttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcc 432 ||||||||||| | || ||||||||||| ||||| |||||||||||||| Sbjct: 26996221 ttcgacctgtcactgatcgacgggttcaacgtgccgatgagcttccagcc 26996270 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 384 tcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcc 432 |||||||||| |||| ||||||||||| ||||| ||||||||||||| Sbjct: 27016797 tcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttccagcc 27016749 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 226 cagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcac 285 |||||||||| |||||||| |||| ||||||| || |||||||||| | ||| ||| Sbjct: 26968165 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgtggcagctgcgccac 26968106 Query: 286 cggcgactgcg 296 ||||||||||| Sbjct: 26968105 cggcgactgcg 26968095 Score = 44.1 bits (22), Expect = 0.52 Identities = 64/78 (82%) Strand = Plus / Minus Query: 226 cagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcac 285 |||||||||| |||||||| |||| ||||||| || |||||| ||| | ||| ||| Sbjct: 26947144 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgcggcagctgcgccac 26947085 Query: 286 cggcgactgcgcgggcgc 303 |||||||||||| ||||| Sbjct: 26947084 cggcgactgcgccggcgc 26947067 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Minus Query: 245 gggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcg 296 ||||||| ||||||| || |||||| ||| ||||| |||||||||||||| Sbjct: 26991941 gggtgcagcttcgacggcgccggccgcggcaggtgcgccaccggcgactgcg 26991890
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 149 bits (75), Expect = 1e-32 Identities = 213/259 (82%) Strand = Plus / Minus Query: 104 accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163 ||||| ||| |||||||||| ||||| |||||| | ||||| ||||||||||| |||||| Sbjct: 26942672 accatcaccatggtgaaccgctgctcgtacacggtgtggccgggcgcgctcccgggcggc 26942613 Query: 164 ggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223 ||||| || |||| |||||| ||||||||| | ||| | | |||| ||||| ||| | Sbjct: 26942612 ggcgcccggctcgacccggggcagtcgtggtcgatcagcgtcgccgccggcacaccggcc 26942553 Query: 224 gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatc 283 |||||| | ||||||||||| || ||| |||||||| || |||||| ||||| ||| | Sbjct: 26942552 gccaggatctggccgcgcaccggctgctccttcgacggcgccggccgcggccgctgcgcc 26942493 Query: 284 accggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagccacgctg 343 || ||||||||||| ||||| ||| |||| ||| |||||||||| ||| |||||||| Sbjct: 26942492 acgggcgactgcgccggcgcgctgtcctgcgccgtctccggcgagccgcccaccacgctg 26942433 Query: 344 gccgagtacacgctcggcc 362 ||||||||||||||||||| Sbjct: 26942432 gccgagtacacgctcggcc 26942414 Score = 83.8 bits (42), Expect = 6e-13 Identities = 204/258 (79%) Strand = Plus / Plus Query: 104 accataaccgtggtgaaccggtgctcctacacgatatggccaggcgcgctcccaggcggc 163 ||||| || ||||||||||| ||| ||||||| | ||||| |||||||| || |||||| Sbjct: 26922324 accatcacggtggtgaaccgctgccgctacacggtgtggccgggcgcgctgcccggcggc 26922383 Query: 164 ggcgcgcgtctcgtcccgggccagtcgtggcagctcaacatgcccgcgggcacggcgggc 223 |||| ||| |||| ||| ||| |||||||| ||||||| | |||| ||||| || | Sbjct: 26922384 ggcgtgcggctcgacccaggcaagtcgtggacgctcaacgtcgccgccggcaccaaggcc 26922443 Query: 224 gccagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatc 283 |||||| | ||||| ||||| || ||| ||||||| || |||||| ||||| ||| || Sbjct: 26922444 gccaggatctggccccgcaccggctgcgacttcgacggcgccggccgcggccgctgcctc 26922503 Query: 284 accggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagccacgctg 343 |||||||||||| ||| || |||| ||| ||||||| || ||| |||||||| Sbjct: 26922504 accggcgactgccgcaacgcgctctcctgcgccgtctccggcgcgccgccgaccacgctg 26922563 Query: 344 gccgagtacacgctcggc 361 |||||||||||||||||| Sbjct: 26922564 gccgagtacacgctcggc 26922581 Score = 69.9 bits (35), Expect = 9e-09 Identities = 73/86 (84%) Strand = Plus / Minus Query: 509 cccggagggtgcgcgagcgcgtgcggncagtttggcggcgacacctactgctgtcgtggc 568 ||||| || ||||| ||||||||||| |||| |||||||||||||||||||| || || Sbjct: 26942246 cccggcggctgcgccagcgcgtgcggcaagttcggcggcgacacctactgctgccgggga 26942187 Query: 569 cagttcgagcacaactgcccgccgac 594 | |||||||||| ||||||||||| Sbjct: 26942186 cggttcgagcacgtgtgcccgccgac 26942161 Score = 69.9 bits (35), Expect = 9e-09 Identities = 82/98 (83%) Strand = Plus / Plus Query: 497 gagctgcaggtgcccggagggtgcgcgagcgcgtgcggncagtttggcggcgacacctac 556 |||||| ||||| ||||||| |||| ||||||||||| |||| ||||||||| ||||| Sbjct: 26922747 gagctgaaggtggccggaggctgcgacagcgcgtgcggcaagttcggcggcgacgcctac 26922806 Query: 557 tgctgtcgtggccagttcgagcacaactgcccgccgac 594 ||||| || || ||| ||||||| | ||||||||||| Sbjct: 26922807 tgctgccgggggaagtacgagcacgagtgcccgccgac 26922844 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 383 ttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcc 432 ||||||||||| | || ||||||||||| ||||| |||||||||||||| Sbjct: 26922618 ttcgacctgtcactgatcgacgggttcaacgtgccgatgagcttccagcc 26922667 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 384 tcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcc 432 |||||||||| |||| ||||||||||| ||||| ||||||||||||| Sbjct: 26942386 tcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttccagcc 26942338 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 226 cagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcac 285 |||||||||| |||||||| |||| ||||||| || |||||||||| | ||| ||| Sbjct: 26894812 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgtggcagctgcgccac 26894753 Query: 286 cggcgactgcg 296 ||||||||||| Sbjct: 26894752 cggcgactgcg 26894742 Score = 44.1 bits (22), Expect = 0.52 Identities = 64/78 (82%) Strand = Plus / Minus Query: 226 cagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcac 285 |||||||||| |||||||| |||| ||||||| || |||||| ||| | ||| ||| Sbjct: 26875314 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgcggcagctgcgccac 26875255 Query: 286 cggcgactgcgcgggcgc 303 |||||||||||| ||||| Sbjct: 26875254 cggcgactgcgccggcgc 26875237 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Minus Query: 245 gggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcg 296 ||||||| ||||||| || |||||| ||| ||||| |||||||||||||| Sbjct: 26918338 gggtgcagcttcgacggcgccggccgcggcaggtgcgccaccggcgactgcg 26918287
>gb|AY112407.1| Zea mays CL3918_1 mRNA sequence Length = 724 Score = 63.9 bits (32), Expect = 6e-07 Identities = 76/91 (83%) Strand = Plus / Plus Query: 504 aggtgcccggagggtgcgcgagcgcgtgcggncagtttggcggcgacacctactgctgtc 563 |||||||||| || ||||| ||||| |||| || | |||||||||||||||||||| | Sbjct: 238 aggtgcccggcggctgcgccagcgcctgcgagaagctcggcggcgacacctactgctgcc 297 Query: 564 gtggccagttcgagcacaactgcccgccgac 594 | ||||||| | || |||| ||||||||||| Sbjct: 298 ggggccagtacaaggacaagtgcccgccgac 328 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 acgctggccgagtacacgctc 358 ||||||||||||||||||||| Sbjct: 87 acgctggccgagtacacgctc 107
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 9e-06 Identities = 96/118 (81%) Strand = Plus / Minus Query: 238 gcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcgc 297 ||||||||| || |||||||| |||||||||| ||||| ||| |||| ||||||||||| Sbjct: 6616974 gcgcacgggcggctccttcgacggcagcggccgcggccgctgcgtcacgggcgactgcgc 6616915 Query: 298 gggcgctctggtctgccgcgtgtccggcgagcagccagccacgctggccgagtacacg 355 ||| ||| |||| || |||||||||| ||| |||||||| ||||||||||| Sbjct: 6616914 cagcgtgctgtcctgctccgcctccggcgagccgcccaccacgctgcccgagtacacg 6616857 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 543 gcggcgacacctactgctgtcgtggccagttcgag 577 ||||||||||||||||||| || |||||||||||| Sbjct: 6616635 gcggcgacacctactgctgccggggccagttcgag 6616601 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 230 gtgtggccgcgcacggggtgcaccttcgac 259 |||||| |||||||||| |||||||||||| Sbjct: 728208 gtgtgggcgcgcacgggctgcaccttcgac 728237
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 60.0 bits (30), Expect = 9e-06 Identities = 96/118 (81%) Strand = Plus / Minus Query: 238 gcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcgc 297 ||||||||| || |||||||| |||||||||| ||||| ||| |||| ||||||||||| Sbjct: 97145 gcgcacgggcggctccttcgacggcagcggccgcggccgctgcgtcacgggcgactgcgc 97086 Query: 298 gggcgctctggtctgccgcgtgtccggcgagcagccagccacgctggccgagtacacg 355 ||| ||| |||| || |||||||||| ||| |||||||| ||||||||||| Sbjct: 97085 cagcgtgctgtcctgctccgcctccggcgagccgcccaccacgctgcccgagtacacg 97028 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 543 gcggcgacacctactgctgtcgtggccagttcgag 577 ||||||||||||||||||| || |||||||||||| Sbjct: 96806 gcggcgacacctactgctgccggggccagttcgag 96772
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 278 tgcatcaccggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagcc 337 ||||||| ||| ||||||| ||||| ||| |||| ||| |||||||||| ||| ||| Sbjct: 10798461 tgcatcatgggcaactgcgccggcgcgctgtcctgctccgtctccggcgagccgcccgcc 10798520 Query: 338 acgctggccgagtacacgctcggc 361 |||||| | ||||||||||||||| Sbjct: 10798521 acgctgacagagtacacgctcggc 10798544 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 238 gcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcgc 297 ||||||||| || |||||||| |||||||||| ||||| ||| |||| ||||||||||| Sbjct: 6945282 gcgcacgggcggctccttcgacggcagcggccgcggccgctgcgtcacgggcgactgcgc 6945341 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 376 ggactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttc 427 |||||||| ||||||||| || || ||||||| |||||| ||||||||||| Sbjct: 9868951 ggacttttacgacctgtcagtgattgacgggtacaatgtcgccatgagcttc 9868900 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 543 gcggcgacacctactgctgtcgtggccagttcgag 577 ||||||||||| ||||||| || |||||||||||| Sbjct: 6945604 gcggcgacaccaactgctgccggggccagttcgag 6945638
>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036B02 Length = 168253 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 278 tgcatcaccggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagcc 337 ||||||| ||| ||||||| ||||| ||| |||| ||| |||||||||| ||| ||| Sbjct: 151524 tgcatcatgggcaactgcgccggcgcgctgtcctgctccgtctccggcgagccgcccgcc 151583 Query: 338 acgctggccgagtacacgctcggc 361 |||||| | ||||||||||||||| Sbjct: 151584 acgctgacagagtacacgctcggc 151607
>dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0055N24 Length = 142702 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 278 tgcatcaccggcgactgcgcgggcgctctggtctgccgcgtgtccggcgagcagccagcc 337 ||||||| ||| ||||||| ||||| ||| |||| ||| |||||||||| ||| ||| Sbjct: 24827 tgcatcatgggcaactgcgccggcgcgctgtcctgctccgtctccggcgagccgcccgcc 24886 Query: 338 acgctggccgagtacacgctcggc 361 |||||| | ||||||||||||||| Sbjct: 24887 acgctgacagagtacacgctcggc 24910
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 238 gcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcgc 297 ||||||||| || |||||||| |||||||||| ||||| ||| |||| ||||||||||| Sbjct: 134807 gcgcacgggcggctccttcgacggcagcggccgcggccgctgcgtcacgggcgactgcgc 134866 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 543 gcggcgacacctactgctgtcgtggccagttcgag 577 ||||||||||| ||||||| || |||||||||||| Sbjct: 135129 gcggcgacaccaactgctgccggggccagttcgag 135163
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 238 gcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcgc 297 ||||||||| || |||||||| |||||||||| ||||| ||| |||| ||||||||||| Sbjct: 4709 gcgcacgggcggctccttcgacggcagcggccgcggccgctgcgtcacgggcgactgcgc 4768 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 543 gcggcgacacctactgctgtcgtggccagttcgag 577 ||||||||||| ||||||| || |||||||||||| Sbjct: 5031 gcggcgacaccaactgctgccggggccagttcgag 5065
>gb|DQ147021.1| Zea mays subsp. parviglumis isolate p14b zeamatin-like protein (zlp) gene, complete cds Length = 733 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcggcg 443 ||||||| Sbjct: 420 ggcggcg 426
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 537 agtttggcggcgacacctactgctgtcgtggccagttc 574 |||| |||||||||||||||||||| || ||||||||| Sbjct: 63045 agttcggcggcgacacctactgctgccggggccagttc 63008 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 320 tccggcgagcagccagccacgctggccgagtacacg 355 |||||||||| ||| |||||||| ||||||||||| Sbjct: 63295 tccggcgagctgcccaccacgctgcccgagtacacg 63260 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 384 tcgacctgtccgtcatagacgggttcaatgtgcccatgagcttc 427 |||||||||| |||| ||||||||||| ||||| |||||||| Sbjct: 63217 tcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttc 63174
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 537 agtttggcggcgacacctactgctgtcgtggccagttc 574 |||| |||||||||||||||||||| || ||||||||| Sbjct: 13849386 agttcggcggcgacacctactgctgccggggccagttc 13849349 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 320 tccggcgagcagccagccacgctggccgagtacacg 355 |||||||||| ||| |||||||| ||||||||||| Sbjct: 13849636 tccggcgagctgcccaccacgctgcccgagtacacg 13849601 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 384 tcgacctgtccgtcatagacgggttcaatgtgcccatgagcttc 427 |||||||||| |||| ||||||||||| ||||| |||||||| Sbjct: 13849558 tcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttc 13849515
>gb|U06831.1|ZMU06831 Zea mays B73 antifungal zeamatin-like protein mRNA, complete cds Length = 957 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 371 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 430 Query: 437 ggcgg 441 ||||| Sbjct: 431 ggcgg 435
>gb|DQ147030.1| Zea diploperennis isolate d8 zeamatin-like protein (zlp) gene, complete cds Length = 913 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147029.1| Zea diploperennis isolate d7 zeamatin-like protein (zlp) gene, complete cds Length = 901 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147028.1| Zea diploperennis isolate d6 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147027.1| Zea diploperennis isolate d5 zeamatin-like protein (zlp) gene, complete cds Length = 907 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147026.1| Zea diploperennis isolate d4 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147024.1| Zea diploperennis isolate d2 zeamatin-like protein (zlp) gene, complete cds Length = 724 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147023.1| Zea diploperennis isolate d1 zeamatin-like protein (zlp) gene, complete cds Length = 907 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147022.1| Zea mays subsp. parviglumis isolate p15 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147019.1| Zea mays subsp. parviglumis isolate p12 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147018.1| Zea mays subsp. parviglumis isolate p11 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147017.1| Zea mays subsp. parviglumis isolate p9 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147016.1| Zea mays subsp. parviglumis isolate p8 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147015.1| Zea mays subsp. parviglumis isolate p6 zeamatin-like protein (zlp) gene, complete cds Length = 890 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147014.1| Zea mays subsp. parviglumis isolate p13 zeamatin-like protein (zlp) gene, complete cds Length = 916 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147013.1| Zea mays subsp. parviglumis isolate p4 zeamatin-like protein (zlp) gene, complete cds Length = 892 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147012.1| Zea mays subsp. parviglumis isolate p5 zeamatin-like protein (zlp) gene, complete cds Length = 901 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147011.1| Zea mays subsp. parviglumis isolate p3 zeamatin-like protein (zlp) gene, complete cds Length = 907 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>gb|DQ147010.1| Zea mays subsp. parviglumis isolate p2 zeamatin-like protein (zlp) gene, complete cds Length = 916 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtc 436 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| |||| | Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcctccccgac 419 Query: 437 ggcgg 441 ||||| Sbjct: 420 ggcgg 424
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 376 ggactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttc 427 |||||||| ||||||||| || || ||||||| |||||| ||||||||||| Sbjct: 159193 ggacttttacgacctgtcagtgattgacgggtacaatgtcgccatgagcttc 159142
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 376 ggactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttc 427 |||||||| ||||||||| || || ||||||| |||||| ||||||||||| Sbjct: 65586 ggacttttacgacctgtcagtgattgacgggtacaatgtcgccatgagcttc 65535
>gb|AY105654.1| Zea mays PCO151032 mRNA sequence Length = 926 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttcc 428 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| Sbjct: 368 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcc 419
>gb|DQ147025.1| Zea diploperennis isolate d3 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttcc 428 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcc 411
>gb|DQ147020.1| Zea mays subsp. parviglumis isolate p14 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttcc 428 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcc 411
>gb|DQ147009.1| Zea mays subsp. parviglumis isolate p1 zeamatin-like protein (zlp) gene, complete cds Length = 916 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 377 gactttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttcc 428 ||||| |||||| | ||| |||| ||||| ||||| |||||||||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttcc 411
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 146 ggcgcgctcccaggcggcggcgc 168 ||||||||||||||||||||||| Sbjct: 3115448 ggcgcgctcccaggcggcggcgc 3115426
>ref|XM_549890.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 230 gtgtggccgcgcacggggtgcaccttcgac 259 |||||| |||||||||| |||||||||||| Sbjct: 241 gtgtgggcgcgcacgggctgcaccttcgac 270
>gb|AY589699.1| Mirabilis jalapa clone FS-87 thaumatin-like protein mRNA, partial cds Length = 496 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 gacgggttcaatgtgcccatga 422 |||||||||||||||||||||| Sbjct: 313 gacgggttcaatgtgcccatga 334
>emb|X68197.1|OSTHLP O.sativa mRNA for thaumatin-like protein Length = 681 Score = 44.1 bits (22), Expect = 0.52 Identities = 64/78 (82%) Strand = Plus / Plus Query: 226 cagggtgtggccgcgcacggggtgcaccttcgaccgcagcggccgtggccggtgcatcac 285 |||||||||| |||||||| |||| ||||||| || |||||| ||| | ||| ||| Sbjct: 235 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgcggcagctgcgccac 294 Query: 286 cggcgactgcgcgggcgc 303 |||||||||||| ||||| Sbjct: 295 cggcgactgcgccggcgc 312
>dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1212_B09 Length = 130728 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 230 gtgtggccgcgcacggggtgcaccttcgac 259 |||||| |||||||||| |||||||||||| Sbjct: 5408 gtgtgggcgcgcacgggctgcaccttcgac 5437
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 230 gtgtggccgcgcacggggtgcaccttcgac 259 |||||| |||||||||| |||||||||||| Sbjct: 111952 gtgtgggcgcgcacgggctgcaccttcgac 111981
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 249 gcaccttcgaccgcagcggccg 270 |||||||||||||||||||||| Sbjct: 1073034 gcaccttcgaccgcagcggccg 1073055
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 430 gcccgtcggcggcgcgccgtgccgcgcgg 458 ||||| ||||||||||| ||||||||||| Sbjct: 3380160 gcccggcggcggcgcgcagtgccgcgcgg 3380132
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 gcgctcccaggcggcggcgcg 169 ||||||||||||||||||||| Sbjct: 27296214 gcgctcccaggcggcggcgcg 27296234
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcgctcccaggcggcggcgcg 169 ||||||||||||||||||||| Sbjct: 6578653 gcgctcccaggcggcggcgcg 6578633 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tcgcggccgctgccgctgccaccg 95 |||| ||||||||||||||||||| Sbjct: 1958786 tcgccgccgctgccgctgccaccg 1958763
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 atcgcggccgctgccgctgccaccg 95 ||||| ||||||||||||||||||| Sbjct: 4882459 atcgccgccgctgccgctgccaccg 4882483
>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1151D08 Length = 152824 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcgctcccaggcggcggcgcg 169 ||||||||||||||||||||| Sbjct: 77323 gcgctcccaggcggcggcgcg 77303
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12 Length = 149011 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 atcgcggccgctgccgctgccaccg 95 ||||| ||||||||||||||||||| Sbjct: 41713 atcgccgccgctgccgctgccaccg 41737
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056D04 Length = 158118 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 atcgcggccgctgccgctgccaccg 95 ||||| ||||||||||||||||||| Sbjct: 87253 atcgccgccgctgccgctgccaccg 87277
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gcttccagcccgtcggcggc 442 |||||||||||||||||||| Sbjct: 164476 gcttccagcccgtcggcggc 164457
>ref|XM_471730.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1302 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 320 tccggcgagcagccagccacgctggccgagtacacg 355 |||||||||| ||| |||||||| ||||||||||| Sbjct: 184 tccggcgagctgcccaccacgctgcccgagtacacg 219
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 gcggcgcgccgtgccgcgcg 457 |||||||||||||||||||| Sbjct: 1378482 gcggcgcgccgtgccgcgcg 1378463
>ref|XM_956567.1| Neurospora crassa OR74A hypothetical protein (NCU01048.1) partial mRNA Length = 1626 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgctgccgctgccaccga 96 |||||||||||||||||||| Sbjct: 91 gccgctgccgctgccaccga 110
>ref|XM_326540.1| Neurospora crassa OR74A hypothetical protein (NCU01048.1) partial mRNA Length = 1626 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgctgccgctgccaccga 96 |||||||||||||||||||| Sbjct: 91 gccgctgccgctgccaccga 110
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gcccgtcggcggcgcgccgt 449 |||||||||||||||||||| Sbjct: 2972444 gcccgtcggcggcgcgccgt 2972463
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 gcggcgcgccgtgccgcgcg 457 |||||||||||||||||||| Sbjct: 2603279 gcggcgcgccgtgccgcgcg 2603260
>gb|AF314590.3| Bradyrhizobium japonicum putative cyclic NTP-binding protein gene, partial cds; LuxA-like protein, MDO-like protein, and AraC-like protein genes, complete cds; nap operon, complete sequence; exodeoxyribosylnuclease EdrN (edrN) genes, complete cds; and putative sensor protein gene, partial cds Length = 11020 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gatcgcggccgctgccgctg 89 |||||||||||||||||||| Sbjct: 5455 gatcgcggccgctgccgctg 5474
>gb|AC132277.3| Mus musculus BAC clone RP24-344C7 from chromosome 9, complete sequence Length = 175852 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ccatattcacaaacaagaac 21 |||||||||||||||||||| Sbjct: 129888 ccatattcacaaacaagaac 129907
>emb|AL512604.14| Human DNA sequence from clone RP11-220I1 on chromosome 9 Contains two novel genes, the 5' end of a novel gene (FLJ22611), an RPL21 psueodgene and two CpG islands, complete sequence Length = 176503 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 agcagccagccacgctggcc 346 |||||||||||||||||||| Sbjct: 44123 agcagccagccacgctggcc 44142
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ggcgcgccgtgccgcgcggc 459 |||||||||||||||||||| Sbjct: 637186 ggcgcgccgtgccgcgcggc 637205
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cagcccgtcggcggcgcgcc 447 |||||||||||||||||||| Sbjct: 867855 cagcccgtcggcggcgcgcc 867874
>gb|BT010058.1| Drosophila melanogaster LD15974 full insert cDNA Length = 3457 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ggccgctgccgctgccaccg 95 |||||||||||||||||||| Sbjct: 729 ggccgctgccgctgccaccg 710
>emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branched-chain amino acid aminotransferase, exons 1-7 Length = 4318 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 tctgccgcgtgtccggcgag 328 |||||||||||||||||||| Sbjct: 1436 tctgccgcgtgtccggcgag 1417
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ggcgcgccgtgccgcgcggc 459 |||||||||||||||||||| Sbjct: 2427567 ggcgcgccgtgccgcgcggc 2427548
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gcccgtcggcggcgcgccgt 449 |||||||||||||||||||| Sbjct: 1151004 gcccgtcggcggcgcgccgt 1151023
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 gcggcgcgccgtgccgcgcg 457 |||||||||||||||||||| Sbjct: 1778873 gcggcgcgccgtgccgcgcg 1778892
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gccagggtgtggccgcgcac 243 |||||||||||||||||||| Sbjct: 211572 gccagggtgtggccgcgcac 211591
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccagggtgtggccgcgcacg 244 |||||||||||||||||||| Sbjct: 123892 ccagggtgtggccgcgcacg 123911
>emb|AL670006.1|NCG15G9 Neurospora crassa DNA linkage group V cosmid contig G15G9 Length = 92230 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gccgctgccgctgccaccga 96 |||||||||||||||||||| Sbjct: 26482 gccgctgccgctgccaccga 26463
>dbj|AB239930.1| Lolium perenne PR5 mRNA for thaumatin-like protein, partial cds Length = 305 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tccgtcatagacgggttcaa 411 |||||||||||||||||||| Sbjct: 255 tccgtcatagacgggttcaa 274
>gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174616 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ggccgctgccgctgccaccg 95 |||||||||||||||||||| Sbjct: 75816 ggccgctgccgctgccaccg 75797
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tcgcggccgctgccgctgccaccg 95 |||| ||||||||||||||||||| Sbjct: 19021 tcgccgccgctgccgctgccaccg 18998
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tcgcggccgctgccgctgccaccg 95 |||| ||||||||||||||||||| Sbjct: 79003 tcgccgccgctgccgctgccaccg 78980
>gb|AC023789.8| Mus musculus chromosome 4 clone RP23-43A16, complete sequence Length = 146120 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tcgcggccgctgccgctgccaccg 95 |||| ||||||||||||||||||| Sbjct: 129401 tcgctgccgctgccgctgccaccg 129378
>ref|NM_168413.1| Drosophila melanogaster CG32062-RB, transcript variant B (CG32062), mRNA Length = 6200 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ggccgctgccgctgccaccg 95 |||||||||||||||||||| Sbjct: 740 ggccgctgccgctgccaccg 721
>ref|NM_168412.1| Drosophila melanogaster CG32062-RD, transcript variant D (CG32062), mRNA Length = 5993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ggccgctgccgctgccaccg 95 |||||||||||||||||||| Sbjct: 740 ggccgctgccgctgccaccg 721
>gb|DQ083762.1| Burkholderia sp. BCC6 polyhydroxybutyrate synthase (phaC) gene, partial cds Length = 1348 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 gcggcgcgccgtgccgcgcg 457 |||||||||||||||||||| Sbjct: 1306 gcggcgcgccgtgccgcgcg 1325
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 gcccgtcggcggcgcgccgt 449 |||||||||||||||||||| Sbjct: 1476912 gcccgtcggcggcgcgccgt 1476893
>ref|XM_575873.1| PREDICTED: Rattus norvegicus forkhead box D3 (Foxd3), mRNA Length = 1737 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ccgcgggcacggcgggcgcc 226 |||||||||||||||||||| Sbjct: 1518 ccgcgggcacggcgggcgcc 1537
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gatcgcggccgctgccgctg 89 |||||||||||||||||||| Sbjct: 7752634 gatcgcggccgctgccgctg 7752653
>dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0025H18 Length = 176201 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tcgcggccgctgccgctgccaccg 95 |||| ||||||||||||||||||| Sbjct: 107954 tcgccgccgctgccgctgccaccg 107931
>gb|AF262873.1| Pleurothallis condylata isolate MWC6808 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, partial sequence Length = 762 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 tgcccgcgggcacggcgggc 223 |||||||||||||||||||| Sbjct: 571 tgcccgcgggcacggcgggc 590
>dbj|AB110643.1| Streptomyces thermoviolaceus stxIV, stxI genes for alpha-L-arabinofuranosidase, xylanase I complete cds Length = 3642 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gccagggtgtggccgcgcac 243 |||||||||||||||||||| Sbjct: 2572 gccagggtgtggccgcgcac 2553
>dbj|AK110501.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-D08, full insert sequence Length = 2551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 cgtcggcggcgcgccgtgcc 452 |||||||||||||||||||| Sbjct: 592 cgtcggcggcgcgccgtgcc 573
>dbj|AK069182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009L15, full insert sequence Length = 693 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 245 gggtgcaccttcgaccgcagcggccgtggccggtgcatcaccggcgactgcg 296 ||||||| ||||||| || |||||| ||| ||||| |||||||||||||| Sbjct: 284 gggtgcagcttcgacggcgccggccgcggcaggtgcgccaccggcgactgcg 335
>gb|AF194024.1|AF194024 Streptomyces thermocyaneoviolaceus xylanase A precursor (xynA) gene, complete cds Length = 1918 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gccagggtgtggccgcgcac 243 |||||||||||||||||||| Sbjct: 848 gccagggtgtggccgcgcac 829
>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete sequence Length = 244140 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ggccgctgccgctgccaccg 95 |||||||||||||||||||| Sbjct: 205585 ggccgctgccgctgccaccg 205566
>emb|AL773539.18| Mouse DNA sequence from clone RP23-9F18 on chromosome 4, complete sequence Length = 182206 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tcgcggccgctgccgctgccaccg 95 |||| ||||||||||||||||||| Sbjct: 16416 tcgctgccgctgccgctgccaccg 16439
>gb|M64551.1|STMXLNA Streptomyces lividans alpha-L-arabinofuranosidase precursor (abfB) and xylanase A precursor (xlnA) genes, complete cds Length = 4501 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gccagggtgtggccgcgcac 243 |||||||||||||||||||| Sbjct: 2683 gccagggtgtggccgcgcac 2664 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,353,221 Number of Sequences: 3902068 Number of extensions: 3353221 Number of successful extensions: 83516 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79586 Number of HSP's gapped (non-prelim): 3921 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
