ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38b08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF255711.1|AF255711 Oryza sativa putative histone deacetylase HD2 mRNA, complete cds Length = 894 Score = 91.7 bits (46), Expect = 3e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 287 gacaagttccctcagatccagttcgacctcgtcttcgaaaaggaatttgagctgtcacac 346 |||||||||||||| |||||||| || | ||||| || || || ||||||||||||||| Sbjct: 178 gacaagttccctcaaatccagtttgatttggtctttgacaaagagtttgagctgtcacac 237 Query: 347 aattccaagacaacaagcgtcttcttctctggctacaatgttttccaacctgcccaggga 406 | ||| ||||| | || || ||||| ||||||||||| |||| ||| || || ||| | Sbjct: 238 acttcaaagactgctagtgtgttcttttctggctacaaagtttcccagccggctgaggaa 297 Query: 407 gatgagatggattttgattctgaaga 432 ||||| |||||||||||||||||||| Sbjct: 298 gatgaaatggattttgattctgaaga 323
>dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142J09, full insert sequence Length = 1284 Score = 91.7 bits (46), Expect = 3e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 287 gacaagttccctcagatccagttcgacctcgtcttcgaaaaggaatttgagctgtcacac 346 |||||||||||||| |||||||| || | ||||| || || || ||||||||||||||| Sbjct: 262 gacaagttccctcaaatccagtttgatttggtctttgacaaagagtttgagctgtcacac 321 Query: 347 aattccaagacaacaagcgtcttcttctctggctacaatgttttccaacctgcccaggga 406 | ||| ||||| | || || ||||| ||||||||||| |||| ||| || || ||| | Sbjct: 322 acttcaaagactgctagtgtgttcttttctggctacaaagtttcccagccggctgaggaa 381 Query: 407 gatgagatggattttgattctgaaga 432 ||||| |||||||||||||||||||| Sbjct: 382 gatgaaatggattttgattctgaaga 407
>dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B10, full insert sequence Length = 1161 Score = 91.7 bits (46), Expect = 3e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 287 gacaagttccctcagatccagttcgacctcgtcttcgaaaaggaatttgagctgtcacac 346 |||||||||||||| |||||||| || | ||||| || || || ||||||||||||||| Sbjct: 263 gacaagttccctcaaatccagtttgatttggtctttgacaaagagtttgagctgtcacac 322 Query: 347 aattccaagacaacaagcgtcttcttctctggctacaatgttttccaacctgcccaggga 406 | ||| ||||| | || || ||||| ||||||||||| |||| ||| || || ||| | Sbjct: 323 acttcaaagactgctagtgtgttcttttctggctacaaagtttcccagccggctgaggaa 382 Query: 407 gatgagatggattttgattctgaaga 432 ||||| |||||||||||||||||||| Sbjct: 383 gatgaaatggattttgattctgaaga 408
>ref|XM_476044.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 894 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 287 gacaagttccctcagatccagttcgacctcgtcttcgaaaaggaatttgagctgtcacac 346 |||||||||||||| |||||||| || | ||||| || || || ||||||||||||||| Sbjct: 178 gacaagttccctcaaatccagtttgatttggtctttgacaaagagtttgagctgtcacac 237 Query: 347 aattccaagacaacaagcgtcttcttctctggctacaatgttttccaacctgcccaggga 406 | ||| ||||| | || || ||||| ||||||||||| |||| ||| || || ||| | Sbjct: 238 acttcaaagactgctagtgtgttcttttctggctacaaagtttcccagccggctgaggaa 297 Query: 407 gatgagatggattttgattctgaaga 432 ||||| ||||||||||||||||||| Sbjct: 298 gatgaattggattttgattctgaaga 323
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 287 gacaagttccctcagatccagttcgacctcgtcttcgaaaaggaatttgagctgtcacac 346 |||||||||||||| |||||||| || | ||||| || || || ||||||||||||||| Sbjct: 19383 gacaagttccctcaaatccagtttgatttggtctttgacaaagagtttgagctgtcacac 19324 Query: 347 aattccaagacaacaagcgtcttcttctctggctacaatgttt 389 | ||| ||||| | || || ||||| ||||||||||| |||| Sbjct: 19323 acttcaaagactgctagtgtgttcttttctggctacaaagttt 19281 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 atggattttgattctgaaga 432 |||||||||||||||||||| Sbjct: 19127 atggattttgattctgaaga 19108
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 287 gacaagttccctcagatccagttcgacctcgtcttcgaaaaggaatttgagctgtcacac 346 |||||||||||||| |||||||| || | ||||| || || || ||||||||||||||| Sbjct: 29534881 gacaagttccctcaaatccagtttgatttggtctttgacaaagagtttgagctgtcacac 29534822 Query: 347 aattccaagacaacaagcgtcttcttctctggctacaatgttt 389 | ||| ||||| | || || ||||| ||||||||||| |||| Sbjct: 29534821 acttcaaagactgctagtgtgttcttttctggctacaaagttt 29534779 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 ccaacctgcccagggagatgag 412 |||||||||||||||||||||| Sbjct: 3519556 ccaacctgcccagggagatgag 3519577 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 atggattttgattctgaaga 432 |||||||||||||||||||| Sbjct: 29534625 atggattttgattctgaaga 29534606
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 287 gacaagttccctcagatccagttcgacctcgtcttcgaaaaggaatttgagctgtcacac 346 |||||||||||||| |||||||| || | ||||| || || || ||||||||||||||| Sbjct: 119151 gacaagttccctcaaatccagtttgatttggtctttgacaaagagtttgagctgtcacac 119092 Query: 347 aattccaagacaacaagcgtcttcttctctggctacaatgttt 389 | ||| ||||| | || || ||||| ||||||||||| |||| Sbjct: 119091 acttcaaagactgctagtgtgttcttttctggctacaaagttt 119049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 atggattttgattctgaaga 432 |||||||||||||||||||| Sbjct: 118895 atggattttgattctgaaga 118876
>emb|Z83848.1|HS57A13 Human DNA sequence from clone RP1-57A13 on chromosome Xq24 Contains the 5' end of the GRIA3 gene for glutamate receptor, ionotrophic, AMPA 3, the gene for a novel protein and a CpG island, complete sequence Length = 169693 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 |||||||||||||||||||||||| Sbjct: 76350 gatgatgacagtgatgatgatggc 76373
>gb|U82815.1|ZMU82815 Zea mays nucleolar histone deacetylase HD2-p39 mRNA, complete cds Length = 1169 Score = 48.1 bits (24), Expect = 0.034 Identities = 84/104 (80%) Strand = Plus / Plus Query: 332 tttgagctgtcacacaattccaagacaacaagcgtcttcttctctggctacaatgttttc 391 ||||||||||| |||| || || || || |||||||||||| |||||||||| ||| Sbjct: 293 tttgagctgtcgcacacatcaaaaactaccagcgtcttcttcactggctacaaggttgaa 352 Query: 392 caacctgcccagggagatgagatggattttgattctgaagatga 435 || || | ||| |||||| |||||| |||||||||||||||| Sbjct: 353 cagccattcgaggaagatgaaatggatcttgattctgaagatga 396 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 atggagttctggggcctcgaggttaagcct 139 |||||||||||||| |||||||| |||||| Sbjct: 74 atggagttctggggtctcgaggtcaagcct 103
>ref|XM_525964.1| PREDICTED: Pan troglodytes similar to Acetylcholine receptor protein, alpha chain precursor (LOC470583), mRNA Length = 1839 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatgg 612 ||||||||||||||||||||||| Sbjct: 1650 gatgatgacagtgatgatgatgg 1628
>gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, complete sequence Length = 193192 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 586 gaaggatgatgacagtgatgatgatgg 612 ||||| ||||||||||||||||||||| Sbjct: 128358 gaagggtgatgacagtgatgatgatgg 128384
>gb|AC111060.5| Mus musculus chromosome 1, clone RP24-121I5, complete sequence Length = 138419 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 594 atgacagtgatgatgatggcagt 616 ||||||||||||||||||||||| Sbjct: 75385 atgacagtgatgatgatggcagt 75407
>gb|AC122898.4| Mus musculus BAC clone RP23-71K9 from 1, complete sequence Length = 230945 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 594 atgacagtgatgatgatggcagt 616 ||||||||||||||||||||||| Sbjct: 186561 atgacagtgatgatgatggcagt 186539
>gb|AC025540.7| Homo sapiens BAC clone RP11-295N22 from 7, complete sequence Length = 160896 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 588 aggatgatgacagtgatgatgat 610 ||||||||||||||||||||||| Sbjct: 156435 aggatgatgacagtgatgatgat 156457
>emb|AL831732.18| Human DNA sequence from clone RP11-396L10 on chromosome 1, complete sequence Length = 38529 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatgg 612 ||||||||||||||||||||||| Sbjct: 26490 gatgatgacagtgatgatgatgg 26468
>emb|AL513307.10| Human DNA sequence from clone RP11-239E12 on chromosome 1, complete sequence Length = 168544 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatgg 612 ||||||||||||||||||||||| Sbjct: 118683 gatgatgacagtgatgatgatgg 118705
>emb|AL513304.27| Human DNA sequence from clone RP11-398B16 on chromosome 10 Contains part of the gene for double-stranded RNA specific adenosine deaminase (ADAR3), a novel gene and two CpG islands, complete sequence Length = 163243 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatgg 612 ||||||||||||||||||||||| Sbjct: 157260 gatgatgacagtgatgatgatgg 157238
>emb|AL137024.27| Human DNA sequence from clone RP11-45A16 on chromosome 9q32-33.3 Contains the 3' end of the PAPPA gene for pregnancy-associated plasma protein A, a novel gene and the 3'end of the ASTN2 gene for astrotactin 2, complete sequence Length = 159430 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatgg 612 ||||||||||||||||||||||| Sbjct: 96992 gatgatgacagtgatgatgatgg 97014
>gb|AC080023.6| Homo sapiens chromosome 11, clone RP11-351I24, complete sequence Length = 189886 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatgg 612 ||||||||||||||||||||||| Sbjct: 145397 gatgatgacagtgatgatgatgg 145375
>gb|AC007240.2| Homo sapiens BAC clone RP11-83M8 from 2, complete sequence Length = 203250 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatgg 612 ||||||||||||||||||||||| Sbjct: 179842 gatgatgacagtgatgatgatgg 179820 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatgg 612 ||||||||||||||||||||| Sbjct: 179606 tgatgacagtgatgatgatgg 179586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatga 609 |||||||||||||||||||| Sbjct: 179678 gatgatgacagtgatgatga 179659 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatga 609 |||||||||||||||||||| Sbjct: 179584 gatgatgacagtgatgatga 179565
>gb|AC005701.1|AC005701 Homo sapiens chromosome 17, clone hRPK.628_E_12, complete sequence Length = 197455 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 594 atgacagtgatgatgatggcagt 616 ||||||||||||||||||||||| Sbjct: 46312 atgacagtgatgatgatggcagt 46290
>gb|AC005668.1|AC005668 Homo sapiens chromosome 17, clone hRPK.243_K_12, complete sequence Length = 152355 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatggcagt 616 |||||||||||||||||||||| |||| Sbjct: 53151 gatgatgacagtgatgatgatgacagt 53125 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 53235 gatgatgacagtgatgatgatg 53214 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 53199 gatgatgacagtgatgatgatg 53178 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 53175 gatgatgacagtgatgatgatg 53154 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 53091 gatgatgacagtgatgatgatg 53070
>gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome 1, complete sequence Length = 209249 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 586 gaaggatgatgacagtgatgatgatgg 612 ||||| ||||||||||||||||||||| Sbjct: 201927 gaagggtgatgacagtgatgatgatgg 201901
>gb|AC103368.7| Mus musculus chromosome 18, clone RP24-131L2, complete sequence Length = 160855 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 agtccatcaaggtttctcctga 165 |||||||||||||||||||||| Sbjct: 11024 agtccatcaaggtttctcctga 11045
>gb|AF047660.2| Caenorhabditis elegans cosmid T09A12, complete sequence Length = 32727 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 15612 gatgatgacagtgatgatgatg 15633
>ref|XM_635858.1| Dictyostelium discoideum hypothetical protein (DDB0215217), partial mRNA Length = 843 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 265 gatgatgacagtgatgatgatg 286
>ref|XM_509484.1| PREDICTED: Pan troglodytes similar to splicing factor, arginine/serine-rich 8 isoform 1; splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot, Drosophila homolog) (LOC452374), mRNA Length = 6957 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 3253 gatgatgacagtgatgatgatg 3274
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 ccaacctgcccagggagatgag 412 |||||||||||||||||||||| Sbjct: 149038 ccaacctgcccagggagatgag 149059
>gb|BT016674.1| Zea mays clone Contig507 mRNA sequence Length = 1258 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 406 agatgagatggattttgattctgaagatga 435 |||||| |||||| |||||||||||||||| Sbjct: 372 agatgaaatggatcttgattctgaagatga 401 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 332 tttgagctgtcacacaattccaagacaacaagcgtcttcttctctggctacaa 384 ||||||||||| |||| || || || || |||||||||||| |||||||||| Sbjct: 298 tttgagctgtcgcacacatcaaaaactaccagcgtcttcttcactggctacaa 350
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 ccaacctgcccagggagatgag 412 |||||||||||||||||||||| Sbjct: 85187 ccaacctgcccagggagatgag 85208
>ref|XM_589826.2| PREDICTED: Bos taurus similar to splicing factor, arginine/serine-rich 8 isoform 1 (LOC512326), mRNA Length = 3596 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 2329 gatgatgacagtgatgatgatg 2350
>ref|NM_004592.2| Homo sapiens splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila) (SFRS8), transcript variant 2A, mRNA Length = 3245 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 1941 gatgatgacagtgatgatgatg 1962
>gb|AC119968.9| Mus musculus chromosome 8, clone RP24-473C10, complete sequence Length = 202850 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 151101 gatgatgacagtgatgatgatg 151080
>ref|XM_534636.2| PREDICTED: Canis familiaris similar to splicing factor, arginine/serine-rich 8 isoform 1, transcript variant 1 (LOC477438), mRNA Length = 3250 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 1921 gatgatgacagtgatgatgatg 1942
>ref|XM_799198.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506553.20) partial mRNA Length = 696 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 670 gatgatgacagtgatgatgatg 691
>ref|XM_661108.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20036) partial mRNA Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 416 gattttgattctgaagatgagt 437 |||||||||||||||||||||| Sbjct: 7 gattttgattctgaagatgagt 28
>gb|AC142498.21| Medicago truncatula clone mth2-24a18, complete sequence Length = 114956 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 67823 gatgatgacagtgatgatgatg 67844
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 ccaacctgcccagggagatgag 412 |||||||||||||||||||||| Sbjct: 86838 ccaacctgcccagggagatgag 86859
>emb|AL133229.40| Human DNA sequence from clone RP5-1167E19 on chromosome 20 Contains STSs, GSSs and a CpG island, complete sequence Length = 161776 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 142014 gatgatgacagtgatgatgatg 141993
>emb|AL022337.19|HS796E4 Human DNA sequence from clone CTA-796E4 on chromosome 22q11.22-12.1, complete sequence Length = 134205 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 21419 gatgatgacagtgatgatgatg 21440
>emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19 on chromosome 22q13.1, complete sequence Length = 114771 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 40068 gatgatgacagtgatgatgatg 40089
>gb|AC153511.4| Mus musculus 10 BAC RP23-102N12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196715 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 90251 gatgatgacagtgatgatgatg 90272
>gb|BC008707.2| Homo sapiens splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila), mRNA (cDNA clone IMAGE:3050255), partial cds Length = 2421 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 1941 gatgatgacagtgatgatgatg 1962
>gb|BC015953.2| Homo sapiens splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila), mRNA (cDNA clone IMAGE:3830054), partial cds Length = 2421 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 1941 gatgatgacagtgatgatgatg 1962
>gb|AC123776.5| Homo sapiens chromosome 8, clone RP11-213I2, complete sequence Length = 157633 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 591 atgatgacagtgatgatgatgg 612 |||||||||||||||||||||| Sbjct: 114901 atgatgacagtgatgatgatgg 114922
>dbj|BS000664.2| Pan troglodytes chromosome Y clone: PTBY-007G10, complete sequence Length = 89389 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 587 aaggatgatgacagtgatgatgatgg 612 ||||||| |||||||||||||||||| Sbjct: 24502 aaggatgctgacagtgatgatgatgg 24477
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 587 aaggatgatgacagtgatgatgatgg 612 ||||||| |||||||||||||||||| Sbjct: 13896881 aaggatgctgacagtgatgatgatgg 13896906
>dbj|AK092410.1| Homo sapiens cDNA FLJ35091 fis, clone PLACE6005786 Length = 1953 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 273 gatgatgacagtgatgatgatg 294
>dbj|AK157085.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830201A08 product:unclassifiable, full insert sequence Length = 570 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 22 gatgatgacagtgatgatgatg 43
>gb|AC012568.7| Homo sapiens chromosome 15, clone RP11-342M21, complete sequence Length = 166785 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 16795 gatgatgacagtgatgatgatg 16816
>gb|AC146250.5| Pan troglodytes BAC clone CH251-148B21 from chromosome y, complete sequence Length = 175351 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 587 aaggatgatgacagtgatgatgatgg 612 ||||||| |||||||||||||||||| Sbjct: 156988 aaggatgctgacagtgatgatgatgg 156963
>ref|XM_625398.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_290), partial mRNA Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 416 gattttgattctgaagatgagt 437 |||||||||||||||||||||| Sbjct: 7 gattttgattctgaagatgagt 28
>emb|AJ496547.1|TRU496547 Takifugu rubripes slc11 alpha gene for solute carrier family 11 protein, exons 1-15 Length = 6502 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 1724 gatgatgacagtgatgatgatg 1745
>gb|AC117500.13| Homo sapiens 12 BAC RP11-495K9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180995 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 19814 gatgatgacagtgatgatgatg 19793
>dbj|AB195483.1| Balaenoptera borealis DNA, SINE flanking sequence Sei23 locus Length = 587 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 151 gatgatgacagtgatgatgatg 172
>gb|AC021093.16|AC021093 Homo sapiens chromosome 8 clone RP11-213I2, complete sequence Length = 157604 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 591 atgatgacagtgatgatgatgg 612 |||||||||||||||||||||| Sbjct: 114872 atgatgacagtgatgatgatgg 114893
>gb|AC133644.3| Homo sapiens BAC clone RP11-1399P15 from 2, complete sequence Length = 192181 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 40030 gatgatgacagtgatgatgatg 40009
>gb|AC140542.3| Homo sapiens chromosome 16 clone XXfos-89147F6, complete sequence Length = 37849 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 14613 gatgatgacagtgatgatgatg 14634
>gb|AC137775.2| Homo sapiens chromosome 16 clone LA16c-466B3, complete sequence Length = 35828 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 19163 gatgatgacagtgatgatgatg 19184
>gb|AC105105.10| Homo sapiens chromosome 18, clone RP11-1151B14, complete sequence Length = 147826 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 25704 gatgatgacagtgatgatgatg 25683
>gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complete sequence Length = 205662 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 51682 gatgatgacagtgatgatgatg 51703
>gb|AF230867.1|AF230867 Medicago sativa clone MSMRD59 resistance gene primer amplified sequence Length = 109 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 432 atgagtctgagtctgaggatga 453 |||||||||||||||||||||| Sbjct: 81 atgagtctgagtctgaggatga 60
>gb|AF254073.1|AF254073 Zea mays histone deacetylase 2 isoform c mRNA, complete cds Length = 903 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 406 agatgagatggattttgattctgaagatga 435 |||||| |||||| |||||||||||||||| Sbjct: 294 agatgaaatggatcttgattctgaagatga 323 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 atggagttctggggcctcgaggttaagcct 139 |||||||||||||| |||||||| |||||| Sbjct: 1 atggagttctggggtctcgaggtcaagcct 30
>gb|AC007857.2|AC007857 Homo sapiens chromosome 16 clone RPCI-11_523L20, complete sequence Length = 147421 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 14302 gatgatgacagtgatgatgatg 14281
>gb|AC131101.3| Mus musculus BAC clone RP23-60O18 from 6, complete sequence Length = 182176 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 88433 gatgatgacagtgatgatgatg 88454
>gb|AY104001.1| Zea mays PCO151917 mRNA sequence Length = 1291 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 406 agatgagatggattttgattctgaagatga 435 |||||| |||||| |||||||||||||||| Sbjct: 372 agatgaaatggatcttgattctgaagatga 401 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 atggagttctggggcctcgaggttaagcct 139 |||||||||||||| |||||||| |||||| Sbjct: 79 atggagttctggggtctcgaggtcaagcct 108
>gb|AC102422.10| Mus musculus chromosome 18, clone RP24-572G3, complete sequence Length = 173218 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 agtccatcaaggtttctcctga 165 |||||||||||||||||||||| Sbjct: 5997 agtccatcaaggtttctcctga 5976
>emb|CT573029.5| M.truncatula DNA sequence from clone MTH2-67H11 on chromosome 3, complete sequence Length = 152399 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 42554 gatgatgacagtgatgatgatg 42533
>emb|CT033503.1| Platynereis dumerilii EST IB0AAA19AH12EM1 Length = 813 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 145 gatgatgacagtgatgatgatg 166
>emb|CT033318.1| Platynereis dumerilii EST IB0AAA22CF02EM1 Length = 798 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 138 gatgatgacagtgatgatgatg 159
>emb|CT033317.1| Platynereis dumerilii EST IB0AAA22CF02FM1 Length = 782 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 661 gatgatgacagtgatgatgatg 640
>emb|CT032495.1| Platynereis dumerilii EST IB0AAA37BF03EM1 Length = 814 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 142 gatgatgacagtgatgatgatg 163
>emb|CT032494.1| Platynereis dumerilii EST IB0AAA37BF03FM1 Length = 804 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 673 gatgatgacagtgatgatgatg 652
>dbj|AB208921.1| Homo sapiens mRNA for SFRS8 protein variant protein Length = 5593 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 5135 gatgatgacagtgatgatgatg 5156
>gb|AC158638.15| Mus musculus 10 BAC RP24-117O6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 185145 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 177467 gatgatgacagtgatgatgatg 177488
>gb|U08377.1|HSU08377 Human homolog of Drosophila splicing regulator suppressor-of-white-apricot mRNA, complete cds Length = 3225 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatg 611 |||||||||||||||||||||| Sbjct: 1921 gatgatgacagtgatgatgatg 1942
>ref|XM_800022.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503395.30) partial mRNA Length = 1572 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgat 610 ||||||||||||||||||||| Sbjct: 757 gatgatgacagtgatgatgat 777
>gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome 15, complete sequence Length = 197376 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgat 610 ||||||||||||||||||||| Sbjct: 26639 gatgatgacagtgatgatgat 26619
>gb|AC109212.15| Mus musculus chromosome 9, clone RP23-329B5, complete sequence Length = 190469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 atgatgacagtgatgatgatg 611 ||||||||||||||||||||| Sbjct: 18270 atgatgacagtgatgatgatg 18290
>gb|AC005487.2| Homo sapiens BAC clone RP11-5N18 from 7, complete sequence Length = 54183 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 ttccaacctgcccagggagatgaga 413 |||| |||||||||||||||||||| Sbjct: 50181 ttcccacctgcccagggagatgaga 50157
>gb|AC005692.1| Homo sapiens PAC clone RP5-842K16 from 7, complete sequence Length = 62536 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgat 610 ||||||||||||||||||||| Sbjct: 27994 gatgatgacagtgatgatgat 27974
>emb|AL365401.20| Human DNA sequence from clone RP11-489M19 on chromosome 20 Contains part of the CDH4 gene for retinal cadherin 4 type 1 (R-cadherin), ESTs, STSs and GSSs, complete sequence Length = 108291 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatggcagt 616 |||| |||||||||||||||||||| Sbjct: 45341 tgattacagtgatgatgatggcagt 45365
>emb|AL121910.26|HSDJ827L5 Human DNA sequence from clone RP5-827L5 on chromosome 20 Contains two putative novel genes, a CpG island, ESTs, STSs and GSSs, complete sequence Length = 141895 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 atgatgacagtgatgatgatg 611 ||||||||||||||||||||| Sbjct: 57452 atgatgacagtgatgatgatg 57432
>emb|AL078645.31|HSG115G20 Human DNA sequence from clone GS1-115G20 on chromosome 1 Contains part of the C1orf21 gene for chromosome 1 open reading frame 21, a novel pseudogene and a novel transcript, complete sequence Length = 206089 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggca 614 |||||||||||||||||||| |||| Sbjct: 135890 gatgatgacagtgatgatgaaggca 135914
>emb|AL035692.10|HS329N18 Human DNA sequence from clone RP3-329N18 on chromosome 6q22.1-22.33, complete sequence Length = 84764 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 atgatgacagtgatgatgatg 611 ||||||||||||||||||||| Sbjct: 73718 atgatgacagtgatgatgatg 73738
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 gtcaaggtcgacggcggccag 259 ||||||||||||||||||||| Sbjct: 36134 gtcaaggtcgacggcggccag 36154
>emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on chromosome 11 Contains a protease pseuodogene, complete sequence Length = 189417 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgat 610 ||||||||||||||||||||| Sbjct: 94002 gatgatgacagtgatgatgat 93982
>emb|AL732607.9| Mouse DNA sequence from clone RP23-16B24 on chromosome 11 Contains a novel pseudogene, two novel genes and a methionine aminopeptidase 2 (Metap2) pseudogene, complete sequence Length = 66800 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 gaggatgagcaggagcccatc 466 ||||||||||||||||||||| Sbjct: 63103 gaggatgagcaggagcccatc 63123
>emb|CR858976.1| Pongo pygmaeus mRNA; cDNA DKFZp468D075 (from clone DKFZp468D075) Length = 2670 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 atgatgacagtgatgatgatg 611 ||||||||||||||||||||| Sbjct: 1413 atgatgacagtgatgatgatg 1433
>gb|AC007623.33| Homo sapiens 12 BAC RP11-608E13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87201 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatgg 612 ||||||||||||||||||||| Sbjct: 83837 tgatgacagtgatgatgatgg 83817
>gb|AC069427.10| Homo sapiens 3 BAC RP11-371I22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 133858 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatggca 614 ||||||||||||| ||||||||||| Sbjct: 116174 gatgatgacagtggtgatgatggca 116150
>ref|XM_688928.1| PREDICTED: Danio rerio similar to thyroid hormone receptor interactor 12 (LOC565660), mRNA Length = 6249 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 588 aggatgatgacagtgatgatgatgg 612 ||||||| ||||||||||||||||| Sbjct: 3011 aggatgaagacagtgatgatgatgg 3035
>ref|XM_688190.1| PREDICTED: Danio rerio similar to thyroid hormone receptor interactor 12 (LOC564866), partial mRNA Length = 6033 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 588 aggatgatgacagtgatgatgatgg 612 ||||||| ||||||||||||||||| Sbjct: 2791 aggatgaagacagtgatgatgatgg 2815
>ref|XM_691017.1| PREDICTED: Danio rerio similar to thyroid hormone receptor interactor 12 (LOC567717), mRNA Length = 3610 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 588 aggatgatgacagtgatgatgatgg 612 ||||||| ||||||||||||||||| Sbjct: 371 aggatgaagacagtgatgatgatgg 395
>gb|BC022288.1| Homo sapiens calsequestrin 2 (cardiac muscle), mRNA (cDNA clone MGC:22461 IMAGE:4289141), complete cds Length = 2634 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 atgatgacagtgatgatgatg 611 ||||||||||||||||||||| Sbjct: 1342 atgatgacagtgatgatgatg 1362
>gb|AC151718.5| Mus musculus BAC clone RP23-142J2 from chromosome 7, complete sequence Length = 213292 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggca 614 |||||||||||||||| |||||||| Sbjct: 96175 gatgatgacagtgatggtgatggca 96199
>gb|AC127321.4| Mus musculus BAC clone RP23-231A8 from chromosome 8, complete sequence Length = 220673 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 587 aaggatgatgacagtgatgatgatg 611 ||||||||||||| ||||||||||| Sbjct: 150896 aaggatgatgacaatgatgatgatg 150920
>gb|AC111182.20| Homo sapiens chromosome 17, clone RP11-936I5, complete sequence Length = 171898 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 tgagtctgaggatgagcagga 459 ||||||||||||||||||||| Sbjct: 67775 tgagtctgaggatgagcagga 67795
>emb|BX255887.8| Zebrafish DNA sequence from clone CH211-272F3 in linkage group 18, complete sequence Length = 158610 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 588 aggatgatgacagtgatgatgatgg 612 ||||||| ||||||||||||||||| Sbjct: 138404 aggatgaagacagtgatgatgatgg 138380
>gb|AC079176.15| Homo sapiens X BAC RP11-325D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186278 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 588 aggatgatgacagtgatgatgatgg 612 ||||||||||| ||||||||||||| Sbjct: 65881 aggatgatgacggtgatgatgatgg 65905
>gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosome 15, complete sequence Length = 177253 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgat 610 ||||||||||||||||||||| Sbjct: 115556 gatgatgacagtgatgatgat 115536
>gb|AC096555.1| Homo sapiens BAC clone RP11-78N15 from 2, complete sequence Length = 155942 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 589 ggatgatgacagtgatgatga 609 ||||||||||||||||||||| Sbjct: 13202 ggatgatgacagtgatgatga 13182
>emb|BX255879.6| Zebrafish DNA sequence from clone CH211-232P17 in linkage group 18, complete sequence Length = 173755 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 588 aggatgatgacagtgatgatgatgg 612 ||||||| ||||||||||||||||| Sbjct: 150693 aggatgaagacagtgatgatgatgg 150669
>emb|BX294441.9| Mouse DNA sequence from clone RP23-421H1 on chromosome 2, complete sequence Length = 96360 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 cacttcctccatctctcccag 193 ||||||||||||||||||||| Sbjct: 68460 cacttcctccatctctcccag 68440
>emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on chromosome 2, complete sequence Length = 202001 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatgg 612 ||||||||||||||||||||| Sbjct: 157155 tgatgacagtgatgatgatgg 157175
>gb|AC007221.2|AC007221 Homo sapiens chromosome 16 clone RPCI-11_418I22, complete sequence Length = 230696 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgat 610 ||||||||||||||||||||| Sbjct: 62067 gatgatgacagtgatgatgat 62047
>emb|CT010464.7| M.truncatula DNA sequence from clone MTH2-95O22 on chromosome 3, complete sequence Length = 117153 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gatgacaagacaaccttgttt 238 ||||||||||||||||||||| Sbjct: 94874 gatgacaagacaaccttgttt 94854
>gb|AY105979.1| Zea mays PCO063337 mRNA sequence Length = 1307 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 332 tttgagctgtcacacaattccaagacaacaagcgtcttcttctctggctacaa 384 |||||| | ||||||||||| |||||| | || || ||||||| ||||||||| Sbjct: 309 tttgagttatcacacaattcaaagacagctagtgttttcttctgtggctacaa 361
>gb|AF026917.1|AF026917 Zea mays histone deacetylase HD2-p39 (HD2) gene, complete cds Length = 2486 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 332 tttgagctgtcacacaattccaagacaacaagcgtcttcttctctggctacaa 384 ||||||||||| |||| || || || || |||||||||||| |||||||||| Sbjct: 1069 tttgagctgtcgcacacatcaaaaactaccagcgtcttcttcactggctacaa 1121
>gb|AC122435.5| Mus musculus BAC clone RP24-199D4 from 8, complete sequence Length = 161717 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 588 aggatgatgacagtgatgatgatgg 612 |||||| |||||||||||||||||| Sbjct: 150558 aggatgttgacagtgatgatgatgg 150582
>gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, complete sequence Length = 228174 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 588 aggatgatgacagtgatgatgatgg 612 |||||| |||||||||||||||||| Sbjct: 203781 aggatgttgacagtgatgatgatgg 203757
>gb|BC107643.1| Danio rerio hypothetical protein LOC553506, mRNA (cDNA clone IMAGE:7402558), partial cds Length = 1184 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 638 gatgacagtgatgatgatgg 657
>gb|AC149528.2| Xenopus tropicalis clone ISB-292P1, complete sequence Length = 87806 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 ggttttaattgacactggatcttc 546 ||||||| |||||||||||||||| Sbjct: 8509 ggttttatttgacactggatcttc 8486
>ref|NM_214167.1| Sus scrofa factor VIII (F8), mRNA Length = 6539 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cgtcttcttctctggctaca 383 |||||||||||||||||||| Sbjct: 2144 cgtcttcttctctggctaca 2163
>gb|AF429315.1| Homo sapiens junctophilin 3 (JPH3) gene, partial cds Length = 125020 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 42667 tgatgacagtgatgatgatg 42686
>gb|AC132404.5| Mus musculus BAC clone RP23-328O21 from chromosome 17, complete sequence Length = 207685 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 cagaagaagcaggttttaat 531 |||||||||||||||||||| Sbjct: 71799 cagaagaagcaggttttaat 71780
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gtcgacggcggccagaagct 264 |||||||||||||||||||| Sbjct: 2281071 gtcgacggcggccagaagct 2281052
>ref|XM_367582.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07493.4) partial mRNA Length = 2523 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 593 gatgacagtgatgatgatggcagt 616 |||||| ||||||||||||||||| Sbjct: 2140 gatgacggtgatgatgatggcagt 2163
>ref|XM_425907.1| PREDICTED: Gallus gallus similar to WD-repeat protein 18 (LOC428347), mRNA Length = 513 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 ggatgagcaggagcccatca 467 |||||||||||||||||||| Sbjct: 439 ggatgagcaggagcccatca 420
>ref|XM_960689.1| Neurospora crassa OR74A hypothetical protein (NCU00642.1) partial mRNA Length = 2967 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ggtcaagaaggatgacaaga 227 |||||||||||||||||||| Sbjct: 1533 ggtcaagaaggatgacaaga 1552
>gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete genome Length = 126479 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 ggccgctgccaaggacattg 575 |||||||||||||||||||| Sbjct: 121583 ggccgctgccaaggacattg 121602
>ref|XM_600478.2| PREDICTED: Bos taurus similar to ribosomal protein L22 like 1 (LOC522203), mRNA Length = 1145 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 tgaagatgagtctgagtctgagga 450 ||||||||| |||||||||||||| Sbjct: 363 tgaagatgaatctgagtctgagga 386
>ref|XM_324821.1| Neurospora crassa OR74A hypothetical protein (NCU00642.1) partial mRNA Length = 2967 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ggtcaagaaggatgacaaga 227 |||||||||||||||||||| Sbjct: 1533 ggtcaagaaggatgacaaga 1552
>ref|XM_457407.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B10659g) partial mRNA Length = 1086 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 495 tgatgacagtgatgatgatg 476
>ref|XM_866514.1| PREDICTED: Bos taurus similar to ribosomal protein L22 like 1 (LOC614872), mRNA Length = 1162 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 tgaagatgagtctgagtctgagga 450 ||||||||| |||||||||||||| Sbjct: 362 tgaagatgaatctgagtctgagga 385
>ref|XM_711480.1| Candida albicans SC5314 hypothetical protein (CaO19_1265), mRNA Length = 3795 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 aggatgatgacagtgatgat 607 |||||||||||||||||||| Sbjct: 3698 aggatgatgacagtgatgat 3717
>ref|NM_213272.1| Danio rerio zgc:77377 (zgc:77377), mRNA Length = 3862 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 2735 gagtctgagtctgaggatga 2754
>gb|AF252828.5| Homo sapiens chromosome 8 clone RP11-245A18 map q24.13, complete sequence Length = 146712 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 atgatgacagtgatgatgat 610 |||||||||||||||||||| Sbjct: 68390 atgatgacagtgatgatgat 68409
>gb|AF216672.5| Homo sapiens chromosome 8 clone RP11-293H22 map q24.13, complete sequence Length = 174030 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 atgatgacagtgatgatgat 610 |||||||||||||||||||| Sbjct: 133393 atgatgacagtgatgatgat 133412
>gb|AC120383.7| Mus musculus chromosome 12, clone RP24-273A7, complete sequence Length = 216796 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 114178 tgatgacagtgatgatgatg 114159
>gb|AC123665.9| Mus musculus chromosome 14, clone RP23-226A4, complete sequence Length = 241576 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 132171 tgatgacagtgatgatgatg 132190
>gb|BC079674.1| Mus musculus ubiquitin specific peptidase 20, mRNA (cDNA clone MGC:90775 IMAGE:30531994), complete cds Length = 5012 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 515 gagtctgagtctgaggatga 534
>gb|BC037199.1| Mus musculus ubiquitin specific peptidase 20, mRNA (cDNA clone IMAGE:3672749) Length = 3544 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 10 gagtctgagtctgaggatga 29
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 gattttgattctgaagatga 435 |||||||||||||||||||| Sbjct: 868800 gattttgattctgaagatga 868819
>ref|XM_855959.1| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 7 (LOC477400), mRNA Length = 6511 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 ||||| |||||||||||||||||| Sbjct: 4108 gatgaagacagtgatgatgatggc 4131
>ref|XM_534596.2| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 1 (LOC477400), mRNA Length = 6578 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 ||||| |||||||||||||||||| Sbjct: 4175 gatgaagacagtgatgatgatggc 4198
>ref|XM_855907.1| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 6 (LOC477400), mRNA Length = 6583 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 ||||| |||||||||||||||||| Sbjct: 4180 gatgaagacagtgatgatgatggc 4203
>ref|XM_845128.1| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 2 (LOC477400), mRNA Length = 6479 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 ||||| |||||||||||||||||| Sbjct: 4076 gatgaagacagtgatgatgatggc 4099
>ref|XM_855844.1| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 5 (LOC477400), mRNA Length = 6502 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 ||||| |||||||||||||||||| Sbjct: 4099 gatgaagacagtgatgatgatggc 4122
>ref|XM_855814.1| PREDICTED: Canis familiaris similar to thyroid hormone receptor interactor 12, transcript variant 4 (LOC477400), mRNA Length = 6688 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 ||||| |||||||||||||||||| Sbjct: 4285 gatgaagacagtgatgatgatggc 4308
>ref|XM_385572.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05396.1) partial mRNA Length = 1407 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatga 609 |||||||||||||||||||| Sbjct: 634 gatgatgacagtgatgatga 653
>gb|AC092720.4| Homo sapiens chromosome 16 clone RP11-482M8, complete sequence Length = 169214 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 127636 tgatgacagtgatgatgatg 127617
>gb|AC126038.4| Mus musculus BAC clone RP24-230C18 from chromosome 8, complete sequence Length = 196490 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 528 taattgacactggatcttcaaaatcaaa 555 |||||||||||| |||||||||| |||| Sbjct: 130233 taattgacactgcatcttcaaaaccaaa 130260
>gb|AF449715.1| Mus musculus pVHL-interacting deubiquitinating enzyme 2 (Vdu2) mRNA, complete cds Length = 4094 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 577 gagtctgagtctgaggatga 596
>ref|XM_759669.1| Theileria parva strain Muguga hypothetical protein (TP02_0966) partial mRNA Length = 999 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatga 609 |||||||||||||||||||| Sbjct: 568 gatgatgacagtgatgatga 587
>gb|AC136729.7| Mus musculus chromosome 3, clone RP23-175I24, complete sequence Length = 216602 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 182182 tgatgacagtgatgatgatg 182163
>ref|XM_761653.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_1225) partial mRNA Length = 1305 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatga 609 |||||||||||||||||||| Sbjct: 94 gatgatgacagtgatgatga 113
>gb|AC160976.2| Mus musculus BAC clone RP24-67M24 from chromosome 9, complete sequence Length = 184288 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 45280 tgatgacagtgatgatgatg 45261
>gb|AC115919.14| Mus musculus chromosome 3, clone RP24-493L18, complete sequence Length = 195790 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 525 ttttaattgacactggatcttcaa 548 ||||| |||||||||||||||||| Sbjct: 48804 ttttatttgacactggatcttcaa 48827
>gb|BC115111.1| Danio rerio cDNA clone IMAGE:8123804, partial cds Length = 1053 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 621 gatgacagtgatgatgatgg 640
>emb|BX510357.2| Human DNA sequence from clone RP11-722J12 on chromosome 1, complete sequence Length = 6340 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 |||| ||||||||||||||||||| Sbjct: 4684 gatggtgacagtgatgatgatggc 4707
>emb|BX119919.5| Human DNA sequence from clone RP11-987D21 on chromosome X, complete sequence Length = 55442 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 |||||||| ||||||||||||||| Sbjct: 23093 gatgatgatagtgatgatgatggc 23116
>emb|AL592436.7| Human DNA sequence from clone RP11-710N8 on chromosome 1 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene and a CCR4-NOT transcription complex, subunit 7 (CNOT7) pseudogene, complete sequence Length = 96782 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 |||| ||||||||||||||||||| Sbjct: 344 gatggtgacagtgatgatgatggc 367
>emb|AL158200.17| Human DNA sequence from clone RP11-278E11 on chromosome Xp11.21-11.22 Contains a novel gene and the gene for a novel protein similar to ubiquinol-cytochrome c reductase binding protein (UQCRB), complete sequence Length = 87538 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 ccaaggagcagaagaagcag 523 |||||||||||||||||||| Sbjct: 43269 ccaaggagcagaagaagcag 43250
>ref|XM_794734.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC575561 (LOC575561), partial mRNA Length = 480 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatgatggc 613 |||||||||| ||||||||||||| Sbjct: 175 gatgatgacaatgatgatgatggc 198
>emb|Y00762.1|HSACHRA Human mRNA for muscle acetylcholine receptor alpha-subunit Length = 1667 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 990 gatgacagtgatgatgatgg 971
>gb|BC068186.1| Danio rerio zgc:77377, mRNA (cDNA clone MGC:77377 IMAGE:6969157), complete cds Length = 3862 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 2735 gagtctgagtctgaggatga 2754
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 826036 tgatgacagtgatgatgatg 826017
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 aggtcgacggcggccagaag 262 |||||||||||||||||||| Sbjct: 176798 aggtcgacggcggccagaag 176817
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 aggtcgacggcggccagaag 262 |||||||||||||||||||| Sbjct: 126949 aggtcgacggcggccagaag 126968
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 aggtcgacggcggccagaag 262 |||||||||||||||||||| Sbjct: 77557 aggtcgacggcggccagaag 77538
>emb|CR381633.6| Zebrafish DNA sequence from clone CH211-230M9 in linkage group 14, complete sequence Length = 163910 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 2122 tgatgacagtgatgatgatg 2103
>emb|AL662846.18| Mouse DNA sequence from clone RP23-399N2 on chromosome 11 Contains a zinc finger protein of the cerebellum 5 (Zic5) pseudogene, complete sequence Length = 189287 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ccacttcctccatctctccc 191 |||||||||||||||||||| Sbjct: 41721 ccacttcctccatctctccc 41702
>gb|AC090753.10| Homo sapiens chromosome 8, clone RP11-245A18, complete sequence Length = 146552 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 atgatgacagtgatgatgat 610 |||||||||||||||||||| Sbjct: 78324 atgatgacagtgatgatgat 78305
>emb|AL590522.7| Mouse DNA sequence from clone RP23-117C5 on chromosome 13 Contains the Prlpc2, Prlpe and Prlpf genes for prolactin-like proteins C2 (1600019F10RIK, Prlpc beta), E (Prlpg) and F (Plp-f), and genes 1600032B14RIK, 1600017L04RIK (3830403L08RIK) and 1600014J19RIK for novel proteins similar to prolactin, complete sequence Length = 211776 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 ggaaaatctaagaaggatga 594 |||||||||||||||||||| Sbjct: 133353 ggaaaatctaagaaggatga 133334
>emb|CR859891.1| Pongo pygmaeus mRNA; cDNA DKFZp469N0516 (from clone DKFZp469N0516) Length = 3444 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 aggatgatgacagtgatgatgatg 611 |||||||||||| ||||||||||| Sbjct: 324 aggatgatgacaatgatgatgatg 347
>gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence Length = 157944 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 134788 tgatgacagtgatgatgatg 134807
>gb|AC008180.15| Homo sapiens 3 BAC RP11-292L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193035 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 atgatgacagtgatgatgat 610 |||||||||||||||||||| Sbjct: 16390 atgatgacagtgatgatgat 16409
>emb|CR592082.1| full-length cDNA clone CS0DE014YD07 of Placenta of Homo sapiens (human) Length = 1310 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 cccctcgcctccggccacca 72 |||||||||||||||||||| Sbjct: 116 cccctcgcctccggccacca 135
>dbj|AK001101.1| Homo sapiens cDNA FLJ10239 fis, clone HEMBB1000589 Length = 1622 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 atgatgacagtgatgatgat 610 |||||||||||||||||||| Sbjct: 9 atgatgacagtgatgatgat 28
>gb|AC104002.5| Homo sapiens, clone RP11-100M12, complete sequence Length = 169822 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatgatggc 613 ||||||||| |||||||||||||| Sbjct: 97999 gatgatgaccgtgatgatgatggc 97976
>gb|AC022392.5| Homo sapiens chromosome 10 clone RP11-150D20, complete sequence Length = 196467 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ggccttaaacccaaccctag 48 |||||||||||||||||||| Sbjct: 33873 ggccttaaacccaaccctag 33854
>gb|AC010536.8| Homo sapiens chromosome 16 clone RP11-278A23, complete sequence Length = 208236 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 175844 tgatgacagtgatgatgatg 175863
>gb|AC104945.4| Homo sapiens chromosome 8, clone RP11-384L9, complete sequence Length = 181328 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 67963 tgatgacagtgatgatgatg 67982
>ref|XM_698265.1| PREDICTED: Danio rerio hypothetical protein LOC553506, transcript variant 1 (LOC553506), mRNA Length = 2157 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 428 gatgacagtgatgatgatgg 447
>dbj|AK163663.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830039L20 product:ubiquitin specific protease 20, full insert sequence Length = 4052 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 536 gagtctgagtctgaggatga 555
>ref|NM_001039523.1| Homo sapiens cholinergic receptor, nicotinic, alpha 1 (muscle) (CHRNA1), transcript variant 1, mRNA Length = 2040 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 1076 gatgacagtgatgatgatgg 1057
>ref|NM_000079.2| Homo sapiens cholinergic receptor, nicotinic, alpha 1 (muscle) (CHRNA1), transcript variant 2, mRNA Length = 1965 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 1001 gatgacagtgatgatgatgg 982
>gb|S77094.1| nicotinic acetylcholine receptor alpha subunit|AChR alpha subunit [human, thymic carcinoma, myasthenia gravis-associated thymoma patient 1494/88, mRNA Partial, 1676 nt] Length = 1676 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 990 gatgacagtgatgatgatgg 971
>dbj|AB179400.1| Macaca fascicularis testis cDNA clone: QtsA-19276, similar to human KIAA0776 (KIAA0776), mRNA, RefSeq: NM_015323.2 Length = 2904 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatga 609 |||||||||||||||||||| Sbjct: 1403 gatgatgacagtgatgatga 1422
>ref|NM_134386.1| Rattus norvegicus G protein-coupled receptor associated sorting protein 1 (Gprasp1), mRNA Length = 6400 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 tgattctgaagatgagtctg 440 |||||||||||||||||||| Sbjct: 2718 tgattctgaagatgagtctg 2737
>dbj|AK047242.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930041H10 product:BA409K20.4 (UBIQUITIN SPECIFIC PROTEASE 20 (KIAA1003)) homolog [Homo sapiens], full insert sequence Length = 4065 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 545 gagtctgagtctgaggatga 564
>gb|AC154336.2| Mus musculus BAC clone RP23-252B13 from chromosome 9, complete sequence Length = 184358 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 174220 tgatgacagtgatgatgatg 174239
>dbj|AK042612.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730010I05 product:weakly similar to BA409K20.4 (UBIQUITIN SPECIFIC PROTEASE 20 (KIAA1003)) [Homo sapiens], full insert sequence Length = 1361 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 543 gagtctgagtctgaggatga 562
>gb|AC159577.3| Macropus eugenii clone ME_KBa-436J11, complete sequence Length = 23152 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 gattttgattctgaagatga 435 |||||||||||||||||||| Sbjct: 21706 gattttgattctgaagatga 21725
>dbj|AK087412.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130012I02 product:ubiquitin specific protease 20, full insert sequence Length = 4053 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 537 gagtctgagtctgaggatga 556
>ref|NM_072421.2| Caenorhabditis elegans F09G2.4 (F09G2.4) mRNA, complete cds Length = 2595 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 1308 tgatgacagtgatgatgatg 1327
>dbj|AK054279.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330009O13 product:ubiquitin specific protease 20, full insert sequence Length = 4101 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 569 gagtctgagtctgaggatga 588
>dbj|AK043439.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730095K12 product:unclassifiable, full insert sequence Length = 511 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 cagaagaagcaggttttaat 531 |||||||||||||||||||| Sbjct: 361 cagaagaagcaggttttaat 342
>dbj|AK078512.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820427H12 product:lysyl oxidase-like, full insert sequence Length = 3147 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 2638 tgatgacagtgatgatgatg 2619
>gb|BC093251.1| Danio rerio hypothetical protein LOC553506, mRNA (cDNA clone IMAGE:7432794), partial cds Length = 976 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 433 gatgacagtgatgatgatgg 452
>dbj|AK029890.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931427A11 product:ubiquitin specific protease 20, full insert sequence Length = 4980 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 523 gagtctgagtctgaggatga 542
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggttaagcctaaccagtcca 149 |||||||||||||||||||| Sbjct: 1848258 ggttaagcctaaccagtcca 1848277
>gb|AC140998.5| Homo sapiens X BAC RP11-428I5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 90420 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 69689 tgatgacagtgatgatgatg 69670 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 69650 tgatgacagtgatgatgatg 69631 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 69611 tgatgacagtgatgatgatg 69592
>dbj|AK173083.1| Mus musculus mRNA for mKIAA1003 protein Length = 4044 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 528 gagtctgagtctgaggatga 547
>gb|AC018890.13| Homo sapiens BAC clone RP11-493G24 from 2, complete sequence Length = 173965 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 50217 gatgacagtgatgatgatgg 50236
>gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y, complete sequence Length = 180019 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 ggatgatgacagtgatgatg 608 |||||||||||||||||||| Sbjct: 108454 ggatgatgacagtgatgatg 108435
>gb|AF026215.1| Caenorhabditis elegans cosmid F09G2, complete sequence Length = 41087 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 16213 tgatgacagtgatgatgatg 16232
>gb|AC137587.2| Homo sapiens 3 BAC RP13-861G15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131999 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 atgatgacagtgatgatgat 610 |||||||||||||||||||| Sbjct: 4475 atgatgacagtgatgatgat 4456
>gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191463 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatga 609 |||||||||||||||||||| Sbjct: 69432 gatgatgacagtgatgatga 69413
>dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1227_D07 Length = 118358 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggttaagcctaaccagtcca 149 |||||||||||||||||||| Sbjct: 86920 ggttaagcctaaccagtcca 86939
>gb|AC145841.3| Macropus eugenii clone ME_KBa-363H17, complete sequence Length = 144488 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 gattttgattctgaagatga 435 |||||||||||||||||||| Sbjct: 601 gattttgattctgaagatga 620
>gb|AY884187.1| Cochliobolus heterostrophus nonribosomal peptide synthetase 2 (NPS2) gene, complete cds Length = 18149 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 342 cacacaattccaagacaacaagcgtctt 369 |||| |||||||||| |||||||||||| Sbjct: 10532 cacataattccaagagaacaagcgtctt 10559
>gb|U49517.1|SSU49517 Sus scrofa factor VIII precursor mRNA, complete cds Length = 6539 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cgtcttcttctctggctaca 383 |||||||||||||||||||| Sbjct: 2144 cgtcttcttctctggctaca 2163
>emb|CR352232.20| Zebrafish DNA sequence from clone DKEY-3L8 in linkage group 23, complete sequence Length = 206478 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 165169 gatgacagtgatgatgatgg 165150
>gb|AF067845.1|AF067845 Homo sapiens clone P1-4248, complete sequence Length = 108932 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 56578 gatgacagtgatgatgatgg 56597
>emb|X02507.1|HSACHR7 H.sapiens gene fragment for acetylcholine receptor (AChR) alpha subunit exon 7 Length = 309 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gatgacagtgatgatgatgg 612 |||||||||||||||||||| Sbjct: 194 gatgacagtgatgatgatgg 175
>emb|AL954136.13| Zebrafish DNA sequence from clone CH211-220E11, complete sequence Length = 194869 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 167694 tgatgacagtgatgatgatg 167713
>dbj|AP003555.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-626H12, complete sequence Length = 121600 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 71274 tgatgacagtgatgatgatg 71293 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 71083 tgatgacagtgatgatgatg 71102 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 70720 tgatgacagtgatgatgatg 70739
>dbj|AP003463.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-651D13, complete sequence Length = 91059 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 8841 tgatgacagtgatgatgatg 8860
>dbj|AP006241.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-660I20, complete sequence Length = 171287 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 atgatgacagtgatgatgat 610 |||||||||||||||||||| Sbjct: 47878 atgatgacagtgatgatgat 47859
>gb|BC088063.1| Xenopus tropicalis hypothetical LOC496913, mRNA (cDNA clone IMAGE:7024289), partial cds Length = 1334 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 523 ggttttaattgacactggatcttc 546 ||||||| |||||||||||||||| Sbjct: 234 ggttttatttgacactggatcttc 257
>gb|AF070718.1|AF070718 Homo sapiens BAC clone 529F11 from 8q21, complete sequence Length = 166832 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 96193 tgatgacagtgatgatgatg 96174
>gb|AC147247.5| Mus musculus BAC clone RP23-468K14 from 8, complete sequence Length = 184377 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 taattgacactggatcttcaaaatcaaa 555 |||||||||||| |||||||||| |||| Sbjct: 125323 taattgacactgcatcttcaaaaccaaa 125296
>gb|AC136021.5| Mus musculus BAC clone RP24-473P10 from 9, complete sequence Length = 171139 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 109374 tgatgacagtgatgatgatg 109355
>ref|NM_028846.2| Mus musculus ubiquitin specific peptidase 20 (Usp20), mRNA Length = 5012 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 515 gagtctgagtctgaggatga 534
>gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3p, complete sequence Length = 189097 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 gatgatgacagtgatgatga 609 |||||||||||||||||||| Sbjct: 100396 gatgatgacagtgatgatga 100415
>dbj|AP006666.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46L11, TM0365, complete sequence Length = 122449 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 gattctgaagatgagtctga 441 |||||||||||||||||||| Sbjct: 87314 gattctgaagatgagtctga 87333
>gb|AC153541.4| Mus musculus 10 BAC RP23-80P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222655 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 93763 tgatgacagtgatgatgatg 93782
>emb|AL591586.8| Mouse DNA sequence from clone RP23-126L18 on chromosome 2, complete sequence Length = 187043 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 11396 tgatgacagtgatgatgatg 11377
>emb|AL807748.10| Mouse DNA sequence from clone RP23-170A3 on chromosome 4, complete sequence Length = 170162 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 84231 gagtctgagtctgaggatga 84212
>emb|AL844546.8| Mouse DNA sequence from clone RP23-243I3 on chromosome 2, complete sequence Length = 170475 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gagtctgagtctgaggatga 453 |||||||||||||||||||| Sbjct: 30043 gagtctgagtctgaggatga 30062
>gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subunit c isoform mRNA, partial cds Length = 911 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 gatgatgacagtgatgatga 609 |||||||||||||||||||| Sbjct: 126 gatgatgacagtgatgatga 107
>dbj|AB045379.1| Xenopus laevis mRNA for pepsinogen C, complete cds Length = 1301 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 523 ggttttaattgacactggatcttc 546 ||||||| |||||||||||||||| Sbjct: 243 ggttttatttgacactggatcttc 266
>dbj|AB051807.1| Rattus norvegicus pips mRNA for Per1 interacting protein of the suprachiamatic nucleus, complete cds Length = 6400 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 tgattctgaagatgagtctg 440 |||||||||||||||||||| Sbjct: 2718 tgattctgaagatgagtctg 2737
>dbj|AP004284.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1268B10 Length = 145226 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 137520 tgatgacagtgatgatgatg 137501
>dbj|AP004388.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1239C7 Length = 165732 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 tgatgacagtgatgatgatg 611 |||||||||||||||||||| Sbjct: 384 tgatgacagtgatgatgatg 365
>emb|AL133245.4|CNS01DUI BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 854M03 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 138041 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cccctcgcctccggccacca 72 |||||||||||||||||||| Sbjct: 68757 cccctcgcctccggccacca 68738 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,147,765 Number of Sequences: 3902068 Number of extensions: 6147765 Number of successful extensions: 139897 Number of sequences better than 10.0: 228 Number of HSP's better than 10.0 without gapping: 229 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 139114 Number of HSP's gapped (non-prelim): 783 length of query: 616 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 593 effective length of database: 17,143,297,704 effective search space: 10165975538472 effective search space used: 10165975538472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
