ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38b07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK106545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-F03, full insert sequence Length = 1756 Score = 359 bits (181), Expect = 7e-96 Identities = 274/306 (89%), Gaps = 8/306 (2%) Strand = Plus / Plus Query: 220 ggcggggcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgagga 279 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 207 ggcggggcagaggtcgctgccgacgccgttcctgacgaagacgtaccagctggtggagga 266 Query: 280 cccggcggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcg 339 ||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||||||| Sbjct: 267 cccggcggtggacgacgtgatctcgtggaacgaggacgggtcgacgttcgtggtgtggcg 326 Query: 340 gccggcggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaa 399 ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 327 gccggcggagttcgcgcgggacctcctccccaagtacttcaagcacaacaacttctccag 386 Query: 400 ctttgtgcggcagctcaacac--------atacgaagatcgtgccggaccggtgggagtt 451 | | ||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 387 cctcgtgcgtcagctcaacacctatggatttaggaagatcgtgccggaccggtgggagtt 446 Query: 452 cgccaacgactgcttccggcgaggcgagaagcgcctgctctgcgacatacaccgccggaa 511 |||||||||||||||||||||||| |||||||| || | || || |||||||||||||| Sbjct: 447 cgccaacgactgcttccggcgaggggagaagcgtttgttgtgtgatatacaccgccggaa 506 Query: 512 ggtggt 517 |||||| Sbjct: 507 ggtggt 512
>dbj|AK106525.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D11, full insert sequence Length = 1422 Score = 359 bits (181), Expect = 7e-96 Identities = 274/306 (89%), Gaps = 8/306 (2%) Strand = Plus / Plus Query: 220 ggcggggcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgagga 279 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 208 ggcggggcagaggtcgctgccgacgccgttcctgacgaagacgtaccagctggtggagga 267 Query: 280 cccggcggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcg 339 ||||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 268 cccggcggtggacgacgtgatctcgtggaacgaggacgggtcgacgttcgtgttgtggcg 327 Query: 340 gccggcggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaa 399 ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 328 gccggcggagttcgcgcgggacctcctccccaagtacttcaagcacaacaacttctccag 387 Query: 400 ctttgtgcggcagctcaacac--------atacgaagatcgtgccggaccggtgggagtt 451 ||| ||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 388 cttcgtgcgccagctcaacacctatggatttaggaagatcgtgccggaccggtgggagtt 447 Query: 452 cgccaacgactgcttccggcgaggcgagaagcgcctgctctgcgacatacaccgccggaa 511 |||||||||||||||||||||||| |||||||| || | || || |||||||||||||| Sbjct: 448 cgccaacgactgcttccggcgaggggagaagcgtttgttgtgtgatatacaccgccggaa 507 Query: 512 ggtggt 517 |||||| Sbjct: 508 ggtggt 513
>dbj|AK105409.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F08, full insert sequence Length = 1475 Score = 301 bits (152), Expect = 1e-78 Identities = 239/269 (88%), Gaps = 8/269 (2%) Strand = Plus / Plus Query: 257 aagacgtaccagctcgtcgaggacccggcggtcgacgacgtgatctcgtggggcgaggac 316 |||||||||||||| || |||||||||||||| |||||||||||||||||| ||||||| Sbjct: 3 aagacgtaccagctggtggaggacccggcggtggacgacgtgatctcgtggaacgaggac 62 Query: 317 gggtcgaccttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtac 376 |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 63 gggtcgacgttcgtggtgtggcggccggcggagttcgcgcgggacctcctccccaagtac 122 Query: 377 ttcaagcacaacaacttctctaactttgtgcggcagctcaacac--------atacgaag 428 |||||||||||||||||||| | ||| ||||| ||||||||||| || |||| Sbjct: 123 ttcaagcacaacaacttctccagcttcgtgcgccagctcaacacctatggatttaggaag 182 Query: 429 atcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcgcctg 488 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 183 atcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggggagaagcgtttg 242 Query: 489 ctctgcgacatacaccgccggaaggtggt 517 | || || |||||||||||||||||||| Sbjct: 243 ttgtgtgatatacaccgccggaaggtggt 271
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 287 bits (145), Expect = 2e-74 Identities = 187/201 (93%) Strand = Plus / Minus Query: 220 ggcggggcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgagga 279 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 20293543 ggcggggcagaggtcgctgccgacgccgttcctgacgaagacgtaccagctggtggagga 20293484 Query: 280 cccggcggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcg 339 ||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||||||| Sbjct: 20293483 cccggcggtggacgacgtgatctcgtggaacgaggacgggtcgacgttcgtggtgtggcg 20293424 Query: 340 gccggcggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaa 399 ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 20293423 gccggcggagttcgcgcgggacctcctccccaagtacttcaagcacaacaacttctccag 20293364 Query: 400 ctttgtgcggcagctcaacac 420 ||| ||||| ||||||||||| Sbjct: 20293363 cttcgtgcgccagctcaacac 20293343 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcg 484 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 20293210 gaagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggggagaagcg 20293151 Query: 485 cctgctctgcgacatacaccgccggaaggtggt 517 || | || || |||||||||||||||||||| Sbjct: 20293150 tttgttgtgtgatatacaccgccggaaggtggt 20293118 Score = 111 bits (56), Expect = 3e-21 Identities = 151/182 (82%), Gaps = 3/182 (1%) Strand = Plus / Minus Query: 218 gcggcggggcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgag 277 ||||||| ||||| | || ||||| |||||||| ||||||||||||| ||||| || || Sbjct: 17056254 gcggcggcgcagaaggcggtgccggcgccgttcttgaccaagacgtatcagctggtggat 17056195 Query: 278 gacccggcggtcgacgacgtgatctcgtggggcgaggacggg---tcgaccttcgtcgtg 334 |||||||| ||| || | |||||||||| || ||| || || |||||||||||| Sbjct: 17056194 gacccggccactgaccacatcgtctcgtggggggacgaccgggtgtccaccttcgtcgtg 17056135 Query: 335 tggcggccggcggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttc 394 ||||||||| |||||||||| || ||| | |||||||| ||||||||||||||||||||| Sbjct: 17056134 tggcggccgccggagttcgcgcgcgacatcctccccaactacttcaagcacaacaacttc 17056075 Query: 395 tc 396 || Sbjct: 17056074 tc 17056073 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 432 gtgccggaccggtgggagttcgccaacgactgcttccggcgagg 475 ||||| || ||||||||||||||||||| | |||||||||||| Sbjct: 17173336 gtgcccgatcggtgggagttcgccaacggcaacttccggcgagg 17173379 Score = 48.1 bits (24), Expect = 0.033 Identities = 108/136 (79%) Strand = Plus / Plus Query: 290 gacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggag 349 ||||| |||||||||||||| |||| ||| | | ||||| |||||| ||||| |||| Sbjct: 17167306 gacgaggtgatctcgtggggaaaggaggggcggtcgttcgtggtgtggaagccggtggag 17167365 Query: 350 ttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcgg 409 |||||||| ||||| ||||| ||||||||||| ||||||||| ||| || || Sbjct: 17167366 ttcgcccgcgacctcctcccgctccacttcaagcactgcaacttctcctccttcgtccgc 17167425 Query: 410 cagctcaacacatacg 425 ||||||||||| |||| Sbjct: 17167426 cagctcaacacctacg 17167441 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacga 460 |||| |||||||||| ||||||||||||| ||||| Sbjct: 17055948 gaaggtcgtgccggagaggtgggagttcgcgaacga 17055913 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 gccgccgcagccgcggccgc 556 |||||||||||||||||||| Sbjct: 12510222 gccgccgcagccgcggccgc 12510203
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 287 bits (145), Expect = 2e-74 Identities = 187/201 (93%) Strand = Plus / Minus Query: 220 ggcggggcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgagga 279 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 72670 ggcggggcagaggtcgctgccgacgccgttcctgacgaagacgtaccagctggtggagga 72611 Query: 280 cccggcggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcg 339 ||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||||||| Sbjct: 72610 cccggcggtggacgacgtgatctcgtggaacgaggacgggtcgacgttcgtggtgtggcg 72551 Query: 340 gccggcggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaa 399 ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 72550 gccggcggagttcgcgcgggacctcctccccaagtacttcaagcacaacaacttctccag 72491 Query: 400 ctttgtgcggcagctcaacac 420 ||| ||||| ||||||||||| Sbjct: 72490 cttcgtgcgccagctcaacac 72470 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcg 484 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 72337 gaagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggggagaagcg 72278 Query: 485 cctgctctgcgacatacaccgccggaaggtggt 517 || | || || |||||||||||||||||||| Sbjct: 72277 tttgttgtgtgatatacaccgccggaaggtggt 72245
>gb|BT018502.1| Zea mays clone EL01N0427E10.d mRNA sequence Length = 1544 Score = 280 bits (141), Expect = 5e-72 Identities = 264/306 (86%), Gaps = 8/306 (2%) Strand = Plus / Plus Query: 218 gcggcggggcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgag 277 |||||||| |||||||| |||| ||||||||||| | ||||||||||||||| || || Sbjct: 305 gcggcgggccagaggtccgtgcccacgccgttcctcagcaagacgtaccagctggtggac 364 Query: 278 gacccggcggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtgg 337 ||||||||||| |||||| | ||||||||| ||| |||||||| ||||| |||||||| Sbjct: 365 gacccggcggtggacgacatcatctcgtggaacgacgacgggtctgccttcatcgtgtgg 424 Query: 338 cggccggcggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctct 397 || |||||||||||||| || || ||| | ||||||||||||||||||||||||||||| Sbjct: 425 cgcccggcggagttcgcgcgcgatctgttgcccaagtacttcaagcacaacaacttctcc 484 Query: 398 aactttgtgcggcagctcaacacatac--------gaagatcgtgccggaccggtgggag 449 | ||| ||||| ||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 485 agcttcgtgcgccagctcaacacctacgggttcaggaagatcgtgccggacaggtgggag 544 Query: 450 ttcgccaacgactgcttccggcgaggcgagaagcgcctgctctgcgacatacaccgccgg 509 ||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 545 ttcgcgaacgactgcttccgccgaggggagaagcggctgctctgcgacatacaccgccgg 604 Query: 510 aaggtg 515 |||||| Sbjct: 605 aaggtg 610
>ref|XM_483635.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1499 Score = 272 bits (137), Expect = 1e-69 Identities = 257/298 (86%), Gaps = 8/298 (2%) Strand = Plus / Plus Query: 226 gcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 ||||||| || |||||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 207 gcagaggacggtgccgacgccgttcctgaccaagacgtaccagctggtggatgacccggc 266 Query: 286 ggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggc 345 |||||||||||| ||||| ||| ||| ||||| || ||||||||||||||||| || || Sbjct: 267 ggtcgacgacgtcatctcctggaacgacgacggctccaccttcgtcgtgtggcgccccgc 326 Query: 346 ggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgt 405 ||||||||||| ||||| |||||||||||||||||||||||||||||||| | ||| || Sbjct: 327 cgagttcgcccgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgt 386 Query: 406 gcggcagctcaacacatac--------gaagatcgtgccggaccggtgggagttcgccaa 457 || ||||||||||| ||| |||||| || |||||| |||||||||||||||| Sbjct: 387 ccgccagctcaacacctacggatttaggaagattgtcccggacaggtgggagttcgccaa 446 Query: 458 cgactgcttccggcgaggcgagaagcgcctgctctgcgacatacaccgccggaaggtg 515 |||||||||||| ||||| || ||| ||||||||||| |||||||||||||||||| Sbjct: 447 cgactgcttccgccgaggggaacggcggctgctctgcgagatacaccgccggaaggtg 504
>gb|AY344484.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF2 mRNA, complete cds Length = 1938 Score = 272 bits (137), Expect = 1e-69 Identities = 257/298 (86%), Gaps = 8/298 (2%) Strand = Plus / Plus Query: 226 gcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 ||||||| || |||||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 559 gcagaggacggtgccgacgccgttcctgaccaagacgtaccagctggtggatgacccggc 618 Query: 286 ggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggc 345 |||||||||||| ||||| ||| ||| ||||| || ||||||||||||||||| || || Sbjct: 619 ggtcgacgacgtcatctcctggaacgacgacggctccaccttcgtcgtgtggcgccccgc 678 Query: 346 ggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgt 405 ||||||||||| ||||| |||||||||||||||||||||||||||||||| | ||| || Sbjct: 679 cgagttcgcccgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgt 738 Query: 406 gcggcagctcaacacatac--------gaagatcgtgccggaccggtgggagttcgccaa 457 || ||||||||||| ||| |||||| || |||||| |||||||||||||||| Sbjct: 739 ccgccagctcaacacctacggatttaggaagattgtcccggacaggtgggagttcgccaa 798 Query: 458 cgactgcttccggcgaggcgagaagcgcctgctctgcgacatacaccgccggaaggtg 515 |||||||||||| ||||| || ||| ||||||||||| |||||||||||||||||| Sbjct: 799 cgactgcttccgccgaggggaacggcggctgctctgcgagatacaccgccggaaggtg 856
>dbj|AK101700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060E19, full insert sequence Length = 1499 Score = 272 bits (137), Expect = 1e-69 Identities = 257/298 (86%), Gaps = 8/298 (2%) Strand = Plus / Plus Query: 226 gcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 ||||||| || |||||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 207 gcagaggacggtgccgacgccgttcctgaccaagacgtaccagctggtggatgacccggc 266 Query: 286 ggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggc 345 |||||||||||| ||||| ||| ||| ||||| || ||||||||||||||||| || || Sbjct: 267 ggtcgacgacgtcatctcctggaacgacgacggctccaccttcgtcgtgtggcgccccgc 326 Query: 346 ggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgt 405 ||||||||||| ||||| |||||||||||||||||||||||||||||||| | ||| || Sbjct: 327 cgagttcgcccgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgt 386 Query: 406 gcggcagctcaacacatac--------gaagatcgtgccggaccggtgggagttcgccaa 457 || ||||||||||| ||| |||||| || |||||| |||||||||||||||| Sbjct: 387 ccgccagctcaacacctacggatttaggaagattgtcccggacaggtgggagttcgccaa 446 Query: 458 cgactgcttccggcgaggcgagaagcgcctgctctgcgacatacaccgccggaaggtg 515 |||||||||||| ||||| || ||| ||||||||||| |||||||||||||||||| Sbjct: 447 cgactgcttccgccgaggggaacggcggctgctctgcgagatacaccgccggaaggtg 504
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 214 bits (108), Expect = 2e-52 Identities = 177/200 (88%) Strand = Plus / Minus Query: 226 gcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 ||||||| || |||||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 27377023 gcagaggacggtgccgacgccgttcctgaccaagacgtaccagctggtggatgacccggc 27376964 Query: 286 ggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggc 345 |||||||||||| ||||| ||| ||| ||||| || ||||||||||||||||| || || Sbjct: 27376963 ggtcgacgacgtcatctcctggaacgacgacggctccaccttcgtcgtgtggcgccccgc 27376904 Query: 346 ggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgt 405 ||||||||||| ||||| |||||||||||||||||||||||||||||||| | ||| || Sbjct: 27376903 cgagttcgcccgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgt 27376844 Query: 406 gcggcagctcaacacatacg 425 || ||||||||||| |||| Sbjct: 27376843 ccgccagctcaacacctacg 27376824 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcg 484 |||||| || |||||| |||||||||||||||||||||||||||| ||||| || ||| Sbjct: 27376715 gaagattgtcccggacaggtgggagttcgccaacgactgcttccgccgaggggaacggcg 27376656 Query: 485 cctgctctgcgacatacaccgccggaaggtg 515 ||||||||||| |||||||||||||||||| Sbjct: 27376655 gctgctctgcgagatacaccgccggaaggtg 27376625 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 325 cttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtacttcaagca 384 |||||||||||||||||| ||||||||||| ||||| | |||||||| ||||||||||| Sbjct: 23152123 cttcgtcgtgtggcggccaccggagttcgccagggacatcctccccaactacttcaagca 23152064 Query: 385 caacaacttctctaactttgtgcggcagctcaacacata 423 || ||||||||| ||| || || |||||||||||||| Sbjct: 23152063 cagcaacttctcctccttcgtccgccagctcaacacata 23152025 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 243 cgccgttcctgaccaagacgtaccagctcgtcgaggaccc 282 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 23152220 cgccgttcctgaccaagacgtaccagctcgtcgacgaccc 23152181 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcg 484 |||| |||||||||| ||||||||||||||||||| | |||| || |||||||||| Sbjct: 23151922 gaaggtcgtgccggagaggtgggagttcgccaacgagttcttcaggaagggcgagaagca 23151863 Query: 485 cctgctctgcgacatacaccg 505 ||||| ||||| || ||||| Sbjct: 23151862 gctgctgtgcgagatccaccg 23151842 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 533 ggcggccgccgcagccgcggccgcggc 559 |||||||||||| |||||||||||||| Sbjct: 24329447 ggcggccgccgcggccgcggccgcggc 24329421 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 532 tggcggccgccgcagccgcggccgcggctggcgccg 567 ||||||| || || |||||||| ||||||||||||| Sbjct: 23347015 tggcggcggcggccgccgcggcggcggctggcgccg 23347050
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 214 bits (108), Expect = 2e-52 Identities = 177/200 (88%) Strand = Plus / Minus Query: 226 gcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 ||||||| || |||||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 3818 gcagaggacggtgccgacgccgttcctgaccaagacgtaccagctggtggatgacccggc 3759 Query: 286 ggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggc 345 |||||||||||| ||||| ||| ||| ||||| || ||||||||||||||||| || || Sbjct: 3758 ggtcgacgacgtcatctcctggaacgacgacggctccaccttcgtcgtgtggcgccccgc 3699 Query: 346 ggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgt 405 ||||||||||| ||||| |||||||||||||||||||||||||||||||| | ||| || Sbjct: 3698 cgagttcgcccgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgt 3639 Query: 406 gcggcagctcaacacatacg 425 || ||||||||||| |||| Sbjct: 3638 ccgccagctcaacacctacg 3619 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcg 484 |||||| || |||||| |||||||||||||||||||||||||||| ||||| || ||| Sbjct: 3510 gaagattgtcccggacaggtgggagttcgccaacgactgcttccgccgaggggaacggcg 3451 Query: 485 cctgctctgcgacatacaccgccggaaggtg 515 ||||||||||| |||||||||||||||||| Sbjct: 3450 gctgctctgcgagatacaccgccggaaggtg 3420
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 214 bits (108), Expect = 2e-52 Identities = 177/200 (88%) Strand = Plus / Minus Query: 226 gcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 ||||||| || |||||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 78550 gcagaggacggtgccgacgccgttcctgaccaagacgtaccagctggtggatgacccggc 78491 Query: 286 ggtcgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggc 345 |||||||||||| ||||| ||| ||| ||||| || ||||||||||||||||| || || Sbjct: 78490 ggtcgacgacgtcatctcctggaacgacgacggctccaccttcgtcgtgtggcgccccgc 78431 Query: 346 ggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgt 405 ||||||||||| ||||| |||||||||||||||||||||||||||||||| | ||| || Sbjct: 78430 cgagttcgcccgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgt 78371 Query: 406 gcggcagctcaacacatacg 425 || ||||||||||| |||| Sbjct: 78370 ccgccagctcaacacctacg 78351 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcg 484 |||||| || |||||| |||||||||||||||||||||||||||| ||||| || ||| Sbjct: 78242 gaagattgtcccggacaggtgggagttcgccaacgactgcttccgccgaggggaacggcg 78183 Query: 485 cctgctctgcgacatacaccgccggaaggtg 515 ||||||||||| |||||||||||||||||| Sbjct: 78182 gctgctctgcgagatacaccgccggaaggtg 78152
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 2e-37 Identities = 158/183 (86%) Strand = Plus / Minus Query: 238 gccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggcggtcgacgacgt 297 |||| |||||||||||| ||||||||||||||| || || |||||| || ||||||||| Sbjct: 14183431 gccggcgccgttcctgagcaagacgtaccagctggtggacgacccgtcgaccgacgacgt 14183372 Query: 298 gatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggagttcgcccg 357 | | |||||||| ||||||| | | |||||||| |||||||||||| ||||||||||| | Sbjct: 14183371 ggtgtcgtggggggaggacgaggccaccttcgtggtgtggcggccgccggagttcgccag 14183312 Query: 358 ggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaa 417 |||||| ||||| || ||||||||||||||||||||||| | ||| || |||||||||| Sbjct: 14183311 ggacctcctcccaaactacttcaagcacaacaacttctccagcttcgtcaggcagctcaa 14183252 Query: 418 cac 420 ||| Sbjct: 14183251 cac 14183249 Score = 83.8 bits (42), Expect = 6e-13 Identities = 115/138 (83%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 289 cgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcgga 348 ||||||| | ||||| ||| ||| ||||| || ||||||||||| ||||| || || || Sbjct: 25743706 cgacgacatcatctcatggaacgacgacggctccaccttcgtcgtctggcgccccgccga 25743647 Query: 349 gttcgcccgggacctgctcccc-aagtacttcaagcacaacaacttctctaactttgtgc 407 ||||||||| ||||| |||||| ||||||||||||| ||| |||||||| | ||| || | Sbjct: 25743646 gttcgcccgcgacctcctcccccaagtacttcaagcgcaataacttctccagcttcgtcc 25743587 Query: 408 ggcagctcaacacatacg 425 | ||||||||||| |||| Sbjct: 25743586 gccagctcaacacctacg 25743569 Score = 73.8 bits (37), Expect = 6e-10 Identities = 71/81 (87%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 435 ccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcgcctgctctgc 494 |||||| |||||||||||||||||||| ||||||||||||| || ||| ||||||||| Sbjct: 25743447 ccggacaggtgggagttcgccaacgac-gcttccggcgaggggaacggcggctgctctgc 25743389 Query: 495 gacatacaccgccggaaggtg 515 || |||||||| |||||||| Sbjct: 25743388 gagatacaccgatggaaggtg 25743368 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 347 gagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtg 406 |||||||| || ||||| |||||||||||||||||||||| ||||||||| ||| || Sbjct: 35685576 gagttcgcgcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtc 35685635 Query: 407 cggcagctcaacacatacg 425 ||||||||||||| |||| Sbjct: 35685636 aggcagctcaacacctacg 35685654 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 373 gtacttcaagcacaacaacttctctaactttgtgcggcagctcaa 417 |||||||||||||||||||||||| | ||| || ||||||||||| Sbjct: 32802779 gtacttcaagcacaacaacttctccagcttcgtccggcagctcaa 32802823 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||| ||||||||| | ||| || || ||||||||||| |||| Sbjct: 30313728 tacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 30313677 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||||| ||||| | ||| || || ||||||||||| |||| Sbjct: 3324246 cttcaagcacaacaatttctccagcttcgtccgccagctcaacacctacg 3324295 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgt 263 |||| ||||||||||||||||||||| Sbjct: 3324108 gccgccgccgttcctgaccaagacgt 3324133 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 gctggcggcgacggccgacgcggcg 223 |||||||||||||| |||||||||| Sbjct: 4002947 gctggcggcgacgggcgacgcggcg 4002971 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 537 gccgccgcagccgcggccgcggctggcgccgt 568 |||||||||||||| |||||| ||| |||||| Sbjct: 30505526 gccgccgcagccgccgccgcgtctgccgccgt 30505557 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 tggcggcgacggccgacgcggcgg 224 |||||||||||| ||||||||||| Sbjct: 29556071 tggcggcgacgggcgacgcggcgg 29556048 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacga 460 |||||| ||| | ||| ||||||||||||||||||| Sbjct: 14181786 gaagatagtggctgacaggtgggagttcgccaacga 14181751
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 165 bits (83), Expect = 2e-37 Identities = 158/183 (86%) Strand = Plus / Minus Query: 238 gccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggcggtcgacgacgt 297 |||| |||||||||||| ||||||||||||||| || || |||||| || ||||||||| Sbjct: 57722 gccggcgccgttcctgagcaagacgtaccagctggtggacgacccgtcgaccgacgacgt 57663 Query: 298 gatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggagttcgcccg 357 | | |||||||| ||||||| | | |||||||| |||||||||||| ||||||||||| | Sbjct: 57662 ggtgtcgtggggggaggacgaggccaccttcgtggtgtggcggccgccggagttcgccag 57603 Query: 358 ggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaa 417 |||||| ||||| || ||||||||||||||||||||||| | ||| || |||||||||| Sbjct: 57602 ggacctcctcccaaactacttcaagcacaacaacttctccagcttcgtcaggcagctcaa 57543 Query: 418 cac 420 ||| Sbjct: 57542 cac 57540 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacga 460 |||||| ||| | ||| ||||||||||||||||||| Sbjct: 56077 gaagatagtggctgacaggtgggagttcgccaacga 56042
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 2e-37 Identities = 158/183 (86%) Strand = Plus / Minus Query: 238 gccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggcggtcgacgacgt 297 |||| |||||||||||| ||||||||||||||| || || |||||| || ||||||||| Sbjct: 14178406 gccggcgccgttcctgagcaagacgtaccagctggtggacgacccgtcgaccgacgacgt 14178347 Query: 298 gatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggagttcgcccg 357 | | |||||||| ||||||| | | |||||||| |||||||||||| ||||||||||| | Sbjct: 14178346 ggtgtcgtggggggaggacgaggccaccttcgtggtgtggcggccgccggagttcgccag 14178287 Query: 358 ggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaa 417 |||||| ||||| || ||||||||||||||||||||||| | ||| || |||||||||| Sbjct: 14178286 ggacctcctcccaaactacttcaagcacaacaacttctccagcttcgtcaggcagctcaa 14178227 Query: 418 cac 420 ||| Sbjct: 14178226 cac 14178224 Score = 83.8 bits (42), Expect = 6e-13 Identities = 115/138 (83%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 289 cgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcgga 348 ||||||| | ||||| ||| ||| ||||| || ||||||||||| ||||| || || || Sbjct: 25835015 cgacgacatcatctcatggaacgacgacggctccaccttcgtcgtctggcgccccgccga 25834956 Query: 349 gttcgcccgggacctgctcccc-aagtacttcaagcacaacaacttctctaactttgtgc 407 ||||||||| ||||| |||||| ||||||||||||| ||| |||||||| | ||| || | Sbjct: 25834955 gttcgcccgcgacctcctcccccaagtacttcaagcgcaataacttctccagcttcgtcc 25834896 Query: 408 ggcagctcaacacatacg 425 | ||||||||||| |||| Sbjct: 25834895 gccagctcaacacctacg 25834878 Score = 73.8 bits (37), Expect = 6e-10 Identities = 71/81 (87%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 435 ccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcgcctgctctgc 494 |||||| |||||||||||||||||||| ||||||||||||| || ||| ||||||||| Sbjct: 25834756 ccggacaggtgggagttcgccaacgac-gcttccggcgaggggaacggcggctgctctgc 25834698 Query: 495 gacatacaccgccggaaggtg 515 || |||||||| |||||||| Sbjct: 25834697 gagatacaccgatggaaggtg 25834677 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 347 gagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtg 406 |||||||| || ||||| |||||||||||||||||||||| ||||||||| ||| || Sbjct: 35775649 gagttcgcgcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtc 35775708 Query: 407 cggcagctcaacacatacg 425 ||||||||||||| |||| Sbjct: 35775709 aggcagctcaacacctacg 35775727 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 373 gtacttcaagcacaacaacttctctaactttgtgcggcagctcaa 417 |||||||||||||||||||||||| | ||| || ||||||||||| Sbjct: 32893289 gtacttcaagcacaacaacttctccagcttcgtccggcagctcaa 32893333 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||| ||||||||| | ||| || || ||||||||||| |||| Sbjct: 30405150 tacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 30405099 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||||| ||||| | ||| || || ||||||||||| |||| Sbjct: 3324357 cttcaagcacaacaatttctccagcttcgtccgccagctcaacacctacg 3324406 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgt 263 |||| ||||||||||||||||||||| Sbjct: 3324219 gccgccgccgttcctgaccaagacgt 3324244 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 gctggcggcgacggccgacgcggcg 223 |||||||||||||| |||||||||| Sbjct: 4003058 gctggcggcgacgggcgacgcggcg 4003082 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 537 gccgccgcagccgcggccgcggctggcgccgt 568 |||||||||||||| |||||| ||| |||||| Sbjct: 30596948 gccgccgcagccgccgccgcgtctgccgccgt 30596979 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 tggcggcgacggccgacgcggcgg 224 |||||||||||| ||||||||||| Sbjct: 29647493 tggcggcgacgggcgacgcggcgg 29647470 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacga 460 |||||| ||| | ||| ||||||||||||||||||| Sbjct: 14176761 gaagatagtggctgacaggtgggagttcgccaacga 14176726
>gb|AY344494.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF12 mRNA, complete cds Length = 1233 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Plus Query: 237 tgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggcggtcgacgacg 296 ||||| ||||||||||||| |||||||||||||| || || ||||| |||| || Sbjct: 211 tgccggcgccgttcctgacgaagacgtaccagctggtggacgacccctgcaccgaccaca 270 Query: 297 tgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggagttcgccc 356 | | |||||||||||||||| | ||||||||||||||||||||| |||||||||||| Sbjct: 271 tcgtgtcgtggggcgaggacgacaccaccttcgtcgtgtggcggccgccggagttcgccc 330 Query: 357 gggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctca 416 | ||||| |||||||| ||||||||||||||||||||||| | ||| || ||||||||| Sbjct: 331 gcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctca 390 Query: 417 acac 420 |||| Sbjct: 391 acac 394
>ref|XM_479293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1526 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Plus Query: 237 tgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggcggtcgacgacg 296 ||||| ||||||||||||| |||||||||||||| || || ||||| |||| || Sbjct: 187 tgccggcgccgttcctgacgaagacgtaccagctggtggacgacccctgcaccgaccaca 246 Query: 297 tgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggagttcgccc 356 | | |||||||||||||||| | ||||||||||||||||||||| |||||||||||| Sbjct: 247 tcgtgtcgtggggcgaggacgacaccaccttcgtcgtgtggcggccgccggagttcgccc 306 Query: 357 gggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctca 416 | ||||| |||||||| ||||||||||||||||||||||| | ||| || ||||||||| Sbjct: 307 gcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctca 366 Query: 417 acac 420 |||| Sbjct: 367 acac 370
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Plus Query: 237 tgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggcggtcgacgacg 296 ||||| ||||||||||||| |||||||||||||| || || ||||| |||| || Sbjct: 26620269 tgccggcgccgttcctgacgaagacgtaccagctggtggacgacccctgcaccgaccaca 26620328 Query: 297 tgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggagttcgccc 356 | | |||||||||||||||| | ||||||||||||||||||||| |||||||||||| Sbjct: 26620329 tcgtgtcgtggggcgaggacgacaccaccttcgtcgtgtggcggccgccggagttcgccc 26620388 Query: 357 gggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctca 416 | ||||| |||||||| ||||||||||||||||||||||| | ||| || ||||||||| Sbjct: 26620389 gcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctca 26620448 Query: 417 acac 420 |||| Sbjct: 26620449 acac 26620452 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 ||||||||| || ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 4172083 tgctccccaggttcttcaagcacaacaacttctccagcttcgtcaggcagctcaacac 4172140 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgtac 265 |||| ||||||||||||||||||||||| Sbjct: 4171958 gccgccgccgttcctgaccaagacgtac 4171985 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gccgcggccgcggctggcgc 565 |||||||||||||||||||| Sbjct: 6263661 gccgcggccgcggctggcgc 6263642
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Plus Query: 237 tgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggcggtcgacgacg 296 ||||| ||||||||||||| |||||||||||||| || || ||||| |||| || Sbjct: 165540 tgccggcgccgttcctgacgaagacgtaccagctggtggacgacccctgcaccgaccaca 165599 Query: 297 tgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggagttcgccc 356 | | |||||||||||||||| | ||||||||||||||||||||| |||||||||||| Sbjct: 165600 tcgtgtcgtggggcgaggacgacaccaccttcgtcgtgtggcggccgccggagttcgccc 165659 Query: 357 gggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctca 416 | ||||| |||||||| ||||||||||||||||||||||| | ||| || ||||||||| Sbjct: 165660 gcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctca 165719 Query: 417 acac 420 |||| Sbjct: 165720 acac 165723
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Plus Query: 237 tgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggcggtcgacgacg 296 ||||| ||||||||||||| |||||||||||||| || || ||||| |||| || Sbjct: 37873 tgccggcgccgttcctgacgaagacgtaccagctggtggacgacccctgcaccgaccaca 37932 Query: 297 tgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggagttcgccc 356 | | |||||||||||||||| | ||||||||||||||||||||| |||||||||||| Sbjct: 37933 tcgtgtcgtggggcgaggacgacaccaccttcgtcgtgtggcggccgccggagttcgccc 37992 Query: 357 gggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctca 416 | ||||| |||||||| ||||||||||||||||||||||| | ||| || ||||||||| Sbjct: 37993 gcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctca 38052 Query: 417 acac 420 |||| Sbjct: 38053 acac 38056
>dbj|AK099354.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042P04, full insert sequence Length = 1416 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Plus Query: 237 tgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggcggtcgacgacg 296 ||||| ||||||||||||| |||||||||||||| || || ||||| |||| || Sbjct: 82 tgccggcgccgttcctgacgaagacgtaccagctggtggacgacccctgcaccgaccaca 141 Query: 297 tgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggagttcgccc 356 | | |||||||||||||||| | ||||||||||||||||||||| |||||||||||| Sbjct: 142 tcgtgtcgtggggcgaggacgacaccaccttcgtcgtgtggcggccgccggagttcgccc 201 Query: 357 gggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctca 416 | ||||| |||||||| ||||||||||||||||||||||| | ||| || ||||||||| Sbjct: 202 gcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctca 261 Query: 417 acac 420 |||| Sbjct: 262 acac 265
>dbj|AK063952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F07, full insert sequence Length = 1526 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Plus Query: 237 tgccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggcggtcgacgacg 296 ||||| ||||||||||||| |||||||||||||| || || ||||| |||| || Sbjct: 187 tgccggcgccgttcctgacgaagacgtaccagctggtggacgacccctgcaccgaccaca 246 Query: 297 tgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggagttcgccc 356 | | |||||||||||||||| | ||||||||||||||||||||| |||||||||||| Sbjct: 247 tcgtgtcgtggggcgaggacgacaccaccttcgtcgtgtggcggccgccggagttcgccc 306 Query: 357 gggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctca 416 | ||||| |||||||| ||||||||||||||||||||||| | ||| || ||||||||| Sbjct: 307 gcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctca 366 Query: 417 acac 420 |||| Sbjct: 367 acac 370
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 111 bits (56), Expect = 3e-21 Identities = 151/182 (82%), Gaps = 3/182 (1%) Strand = Plus / Minus Query: 218 gcggcggggcagaggtcgctgccgacgccgttcctgaccaagacgtaccagctcgtcgag 277 ||||||| ||||| | || ||||| |||||||| ||||||||||||| ||||| || || Sbjct: 49913 gcggcggcgcagaaggcggtgccggcgccgttcttgaccaagacgtatcagctggtggat 49854 Query: 278 gacccggcggtcgacgacgtgatctcgtggggcgaggacggg---tcgaccttcgtcgtg 334 |||||||| ||| || | |||||||||| || ||| || || |||||||||||| Sbjct: 49853 gacccggccactgaccacatcgtctcgtggggggacgaccgggtgtccaccttcgtcgtg 49794 Query: 335 tggcggccggcggagttcgcccgggacctgctccccaagtacttcaagcacaacaacttc 394 ||||||||| |||||||||| || ||| | |||||||| ||||||||||||||||||||| Sbjct: 49793 tggcggccgccggagttcgcgcgcgacatcctccccaactacttcaagcacaacaacttc 49734 Query: 395 tc 396 || Sbjct: 49733 tc 49732 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacga 460 |||| |||||||||| ||||||||||||| ||||| Sbjct: 49607 gaaggtcgtgccggagaggtgggagttcgcgaacga 49572
>ref|XM_473539.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 918 Score = 109 bits (55), Expect = 1e-20 Identities = 145/176 (82%), Gaps = 8/176 (4%) Strand = Plus / Plus Query: 324 ccttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtacttcaagc 383 ||||||| |||||||| || || ||||||||||| ||||| ||||||||| ||||||||| Sbjct: 107 ccttcgtggtgtggcgccccgccgagttcgcccgcgacctcctccccaagcacttcaagc 166 Query: 384 acaacaacttctctaactttgtgcggcagctcaacacatac--------gaagatcgtgc 435 ||| ||||||||| ||| ||||| ||||||||||| ||| |||| | ||| Sbjct: 167 acagcaacttctcctccttcgtgcgccagctcaacacctacggattcaagaaggtggtgg 226 Query: 436 cggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcgcctgctc 491 |||| |||||||||||||||||||||||||| || |||| ||||||| ||||||| Sbjct: 227 cggataggtgggagttcgccaacgactgcttcaggagaggggagaagcacctgctc 282
>gb|AY344483.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF1 mRNA, complete cds Length = 1172 Score = 109 bits (55), Expect = 1e-20 Identities = 145/176 (82%), Gaps = 8/176 (4%) Strand = Plus / Plus Query: 324 ccttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtacttcaagc 383 ||||||| |||||||| || || ||||||||||| ||||| ||||||||| ||||||||| Sbjct: 177 ccttcgtggtgtggcgccccgccgagttcgcccgcgacctcctccccaagcacttcaagc 236 Query: 384 acaacaacttctctaactttgtgcggcagctcaacacatac--------gaagatcgtgc 435 ||| ||||||||| ||| ||||| ||||||||||| ||| |||| | ||| Sbjct: 237 acagcaacttctcctccttcgtgcgccagctcaacacctacggattcaagaaggtggtgg 296 Query: 436 cggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcgcctgctc 491 |||| |||||||||||||||||||||||||| || |||| ||||||| ||||||| Sbjct: 297 cggataggtgggagttcgccaacgactgcttcaggagaggggagaagcacctgctc 352
>ref|XM_482889.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1143 Score = 95.6 bits (48), Expect = 2e-16 Identities = 153/189 (80%), Gaps = 8/189 (4%) Strand = Plus / Plus Query: 325 cttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtacttcaagca 384 |||||||||||||||||| ||||||||||| ||||| | |||||||| ||||||||||| Sbjct: 168 cttcgtcgtgtggcggccaccggagttcgccagggacatcctccccaactacttcaagca 227 Query: 385 caacaacttctctaactttgtgcggcagctcaacaca--------tacgaagatcgtgcc 436 || ||||||||| ||| || || |||||||||||| || |||| ||||||| Sbjct: 228 cagcaacttctcctccttcgtccgccagctcaacacatatgggtttaggaaggtcgtgcc 287 Query: 437 ggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcgcctgctctgcga 496 ||| ||||||||||||||||||| | |||| || |||||||||| ||||| ||||| Sbjct: 288 ggagaggtgggagttcgccaacgagttcttcaggaagggcgagaagcagctgctgtgcga 347 Query: 497 catacaccg 505 || ||||| Sbjct: 348 gatccaccg 356 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 243 cgccgttcctgaccaagacgtaccagctcgtcgaggaccc 282 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 71 cgccgttcctgaccaagacgtaccagctcgtcgacgaccc 110
>gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone CL000798.1 R2R3-MYB gene region Length = 12635 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 325 cttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtacttcaagca 384 |||||||||||||||||| ||||||||||| ||||| | |||||||| ||||||||||| Sbjct: 12180 cttcgtcgtgtggcggccaccggagttcgccagggacatcctccccaactacttcaagca 12239 Query: 385 caacaacttctctaactttgtgcggcagctcaacacata 423 || ||||||||| ||| || || |||||||||||||| Sbjct: 12240 cagcaacttctcctccttcgtccgccagctcaacacata 12278 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 243 cgccgttcctgaccaagacgtaccagctcgtcgaggaccc 282 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 12083 cgccgttcctgaccaagacgtaccagctcgtcgacgaccc 12122 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcg 484 |||| |||||||||| ||||||||||||||||||| | |||| || |||||||||| Sbjct: 12381 gaaggtcgtgccggagaggtgggagttcgccaacgagttcttcaggaagggcgagaagca 12440 Query: 485 cctgctctgcgacatacaccg 505 ||||| ||||| || ||||| Sbjct: 12441 gctgctgtgcgagatccaccg 12461
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 325 cttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtacttcaagca 384 |||||||||||||||||| ||||||||||| ||||| | |||||||| ||||||||||| Sbjct: 75222 cttcgtcgtgtggcggccaccggagttcgccagggacatcctccccaactacttcaagca 75163 Query: 385 caacaacttctctaactttgtgcggcagctcaacacata 423 || ||||||||| ||| || || |||||||||||||| Sbjct: 75162 cagcaacttctcctccttcgtccgccagctcaacacata 75124 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 243 cgccgttcctgaccaagacgtaccagctcgtcgaggaccc 282 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 75319 cgccgttcctgaccaagacgtaccagctcgtcgacgaccc 75280 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Minus Query: 425 gaagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcg 484 |||| |||||||||| ||||||||||||||||||| | |||| || |||||||||| Sbjct: 75021 gaaggtcgtgccggagaggtgggagttcgccaacgagttcttcaggaagggcgagaagca 74962 Query: 485 cctgctctgcgacatacaccg 505 ||||| ||||| || ||||| Sbjct: 74961 gctgctgtgcgagatccaccg 74941
>ref|NM_191220.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1323 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 355 ccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagct 414 |||||| ||||||||||||||||||||||||||||||||||| | ||| ||||| ||||| Sbjct: 144 ccgggatctgctccccaagtacttcaagcacaacaacttctccagcttcgtgcgacagct 203 Query: 415 caacac 420 |||||| Sbjct: 204 caacac 209
>gb|AY344491.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF9 mRNA, complete cds Length = 1548 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 355 ccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagct 414 |||||| ||||||||||||||||||||||||||||||||||| | ||| ||||| ||||| Sbjct: 235 ccgggatctgctccccaagtacttcaagcacaacaacttctccagcttcgtgcgacagct 294 Query: 415 caacac 420 |||||| Sbjct: 295 caacac 300
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 324 ccttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtacttcaagc 383 ||||||| |||||||| || || ||||||||||| ||||| ||||||||| ||||||||| Sbjct: 38660 ccttcgtggtgtggcgccccgccgagttcgcccgcgacctcctccccaagcacttcaagc 38719 Query: 384 acaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||| ||||||||| ||| ||||| ||||||||||| |||| Sbjct: 38720 acagcaacttctcctccttcgtgcgccagctcaacacctacg 38761 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 442 ggtgggagttcgccaacgactgcttccggcgaggcgagaagcgcctgctc 491 |||||||||||||||||||||||||| || |||| ||||||| ||||||| Sbjct: 38888 ggtgggagttcgccaacgactgcttcaggagaggggagaagcacctgctc 38937
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 324 ccttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtacttcaagc 383 ||||||| |||||||| || || ||||||||||| ||||| ||||||||| ||||||||| Sbjct: 28547870 ccttcgtggtgtggcgccccgccgagttcgcccgcgacctcctccccaagcacttcaagc 28547929 Query: 384 acaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||| ||||||||| ||| ||||| ||||||||||| |||| Sbjct: 28547930 acagcaacttctcctccttcgtgcgccagctcaacacctacg 28547971 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 442 ggtgggagttcgccaacgactgcttccggcgaggcgagaagcgcctgctc 491 |||||||||||||||||||||||||| || |||| ||||||| ||||||| Sbjct: 28548098 ggtgggagttcgccaacgactgcttcaggagaggggagaagcacctgctc 28548147 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 tggcggccgccgcagccgcggccg 555 ||||||||||||||| |||||||| Sbjct: 14907412 tggcggccgccgcagacgcggccg 14907435 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 tggcggccgccgcagccgcggccg 555 ||||||||||||||| |||||||| Sbjct: 14497399 tggcggccgccgcagacgcggccg 14497422
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 355 ccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagct 414 |||||| ||||||||||||||||||||||||||||||||||| | ||| ||||| ||||| Sbjct: 31363994 ccgggatctgctccccaagtacttcaagcacaacaacttctccagcttcgtgcgacagct 31364053 Query: 415 caacac 420 |||||| Sbjct: 31364054 caacac 31364059 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 cggccgccgcagccgcggccgcggc 559 ||||||||||||||||| ||||||| Sbjct: 39151551 cggccgccgcagccgcgtccgcggc 39151575 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 tggcggcgacggccgacgcggcgg 224 |||||||||||| ||||||||||| Sbjct: 42776877 tggcggcgacgggcgacgcggcgg 42776900 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 |||||||||||| ||||||| | | ||| || |||||||||||||| |||| Sbjct: 30576092 tacttcaagcaccgcaacttcgccagcttcgtccggcagctcaacacctacg 30576143
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 355 ccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagct 414 |||||| ||||||||||||||||||||||||||||||||||| | ||| ||||| ||||| Sbjct: 118277 ccgggatctgctccccaagtacttcaagcacaacaacttctccagcttcgtgcgacagct 118336 Query: 415 caacac 420 |||||| Sbjct: 118337 caacac 118342
>dbj|AK109856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G05, full insert sequence Length = 1735 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 355 ccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagct 414 |||||| ||||||||||||||||||||||||||||||||||| | ||| ||||| ||||| Sbjct: 324 ccgggatctgctccccaagtacttcaagcacaacaacttctccagcttcgtgcgacagct 383 Query: 415 caacac 420 |||||| Sbjct: 384 caacac 389
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 83.8 bits (42), Expect = 6e-13 Identities = 115/138 (83%), Gaps = 1/138 (0%) Strand = Plus / Plus Query: 289 cgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcgga 348 ||||||| | ||||| ||| ||| ||||| || ||||||||||| ||||| || || || Sbjct: 101190 cgacgacatcatctcatggaacgacgacggctccaccttcgtcgtctggcgccccgccga 101249 Query: 349 gttcgcccgggacctgctcccc-aagtacttcaagcacaacaacttctctaactttgtgc 407 ||||||||| ||||| |||||| ||||||||||||| ||| |||||||| | ||| || | Sbjct: 101250 gttcgcccgcgacctcctcccccaagtacttcaagcgcaataacttctccagcttcgtcc 101309 Query: 408 ggcagctcaacacatacg 425 | ||||||||||| |||| Sbjct: 101310 gccagctcaacacctacg 101327 Score = 73.8 bits (37), Expect = 6e-10 Identities = 71/81 (87%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 435 ccggaccggtgggagttcgccaacgactgcttccggcgaggcgagaagcgcctgctctgc 494 |||||| |||||||||||||||||||| ||||||||||||| || ||| ||||||||| Sbjct: 101449 ccggacaggtgggagttcgccaacgac-gcttccggcgaggggaacggcggctgctctgc 101507 Query: 495 gacatacaccgccggaaggtg 515 || |||||||| |||||||| Sbjct: 101508 gagatacaccgatggaaggtg 101528
>emb|X82943.1|ZMHSFB Z.mays mRNA for heat shock factor Length = 2048 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 357 gggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctca 416 |||| ||||||||||||||||||||||||||||||||||| | ||| |||||||| || | Sbjct: 313 gggatctgctccccaagtacttcaagcacaacaacttctccagcttcgtgcggcaactga 372 Query: 417 acacatacg 425 |||| |||| Sbjct: 373 acacctacg 381
>gb|AY110852.1| Zea mays CL2307_1 mRNA sequence Length = 2364 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 357 gggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctca 416 |||| ||||||||||||||||||||||||||||||||||| | ||| |||||||| || | Sbjct: 313 gggatctgctccccaagtacttcaagcacaacaacttctccagcttcgtgcggcaactga 372 Query: 417 acacatacg 425 |||| |||| Sbjct: 373 acacctacg 381
>ref|XM_470452.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1920 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 347 gagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtg 406 |||||||| || ||||| |||||||||||||||||||||| ||||||||| ||| || Sbjct: 211 gagttcgcgcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtc 270 Query: 407 cggcagctcaacacatacg 425 ||||||||||||| |||| Sbjct: 271 aggcagctcaacacctacg 289
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 347 gagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtg 406 |||||||| || ||||| |||||||||||||||||||||| ||||||||| ||| || Sbjct: 83354 gagttcgcgcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtc 83413 Query: 407 cggcagctcaacacatacg 425 ||||||||||||| |||| Sbjct: 83414 aggcagctcaacacctacg 83432
>gb|AY344485.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF3 mRNA, complete cds Length = 1742 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 347 gagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtg 406 |||||||| || ||||| |||||||||||||||||||||| ||||||||| ||| || Sbjct: 310 gagttcgcgcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtc 369 Query: 407 cggcagctcaacacatacg 425 ||||||||||||| |||| Sbjct: 370 aggcagctcaacacctacg 388
>dbj|AK106118.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E07, full insert sequence Length = 1635 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 347 gagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtg 406 |||||||| || ||||| |||||||||||||||||||||| ||||||||| ||| || Sbjct: 245 gagttcgcgcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtc 304 Query: 407 cggcagctcaacacatacg 425 ||||||||||||| |||| Sbjct: 305 aggcagctcaacacctacg 323
>dbj|AK100430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088F14, full insert sequence Length = 2051 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 347 gagttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtg 406 |||||||| || ||||| |||||||||||||||||||||| ||||||||| ||| || Sbjct: 336 gagttcgcgcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtc 395 Query: 407 cggcagctcaacacatacg 425 ||||||||||||| |||| Sbjct: 396 aggcagctcaacacctacg 414
>gb|BC013716.1| Mus musculus heat shock factor 1, mRNA (cDNA clone MGC:18620 IMAGE:3978881), complete cds Length = 2032 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||| Sbjct: 323 tgctgcccaagtacttcaagcacaacaacatggctagcttcgtgcggcagctcaaca 379
>ref|NM_008296.1| Mus musculus heat shock factor 1 (Hsf1), mRNA Length = 2032 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||| Sbjct: 323 tgctgcccaagtacttcaagcacaacaacatggctagcttcgtgcggcagctcaaca 379
>gb|AC157566.6| Mus musculus chromosome 15, clone RP23-415D19, complete sequence Length = 196738 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||| Sbjct: 140368 tgctgcccaagtacttcaagcacaacaacatggctagcttcgtgcggcagctcaaca 140312
>emb|X61753.1|MMHSF1 M.musculus mRNA for heat shock transcription factor 1 Length = 1947 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||| Sbjct: 306 tgctgcccaagtacttcaagcacaacaacatggctagcttcgtgcggcagctcaaca 362
>gb|AC142129.4| Rattus norvegicus BAC CH230-183M21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 215272 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 165594 tgctgcccaagtacttcaagcacaacaacatggccagctttgtgcggcagctcaaca 165650
>dbj|AK082507.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230058A10 product:heat shock factor 1, full insert sequence Length = 2704 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||| Sbjct: 347 tgctgcccaagtacttcaagcacaacaacatggctagcttcgtgcggcagctcaaca 403
>dbj|AK089144.1| Mus musculus 10 days neonate olfactory brain cDNA, RIKEN full-length enriched library, clone:E530015F20 product:heat shock factor 1, full insert sequence Length = 2009 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||| Sbjct: 348 tgctgcccaagtacttcaagcacaacaacatggctagcttcgtgcggcagctcaaca 404
>gb|BC094064.1| Mus musculus heat shock factor 1, mRNA (cDNA clone MGC:102664 IMAGE:4158683), complete cds Length = 2121 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||| Sbjct: 333 tgctgcccaagtacttcaagcacaacaacatggctagcttcgtgcggcagctcaaca 389
>gb|AF059275.1|AF059275 Mus musculus heat shock transcription factor 1 (Hsf1) gene, partial cds Length = 11395 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||| Sbjct: 4993 tgctgcccaagtacttcaagcacaacaacatggctagcttcgtgcggcagctcaaca 5049
>ref|XM_475737.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1380 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 354 cccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagc 413 |||| |||||| | ||||||||||||||||||||||||||||| | ||| | |||||| Sbjct: 167 cccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagc 226 Query: 414 tcaacacatacg 425 ||||||| |||| Sbjct: 227 tcaacacctacg 238
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 354 cccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagc 413 |||| |||||| | ||||||||||||||||||||||||||||| | ||| | |||||| Sbjct: 55744 cccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagc 55803 Query: 414 tcaacacatacg 425 ||||||| |||| Sbjct: 55804 tcaacacctacg 55815
>gb|AY344492.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF10 mRNA, complete cds Length = 1634 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 354 cccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagc 413 |||| |||||| | ||||||||||||||||||||||||||||| | ||| | |||||| Sbjct: 233 cccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagc 292 Query: 414 tcaacacatacg 425 ||||||| |||| Sbjct: 293 tcaacacctacg 304
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 354 cccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagc 413 |||| |||||| | ||||||||||||||||||||||||||||| | ||| | |||||| Sbjct: 26138404 cccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagc 26138463 Query: 414 tcaacacatacg 425 ||||||| |||| Sbjct: 26138464 tcaacacctacg 26138475
>dbj|AK100412.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087K12, full insert sequence Length = 1961 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 354 cccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagc 413 |||| |||||| | ||||||||||||||||||||||||||||| | ||| | |||||| Sbjct: 534 cccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagc 593 Query: 414 tcaacacatacg 425 ||||||| |||| Sbjct: 594 tcaacacctacg 605
>dbj|AB050098.1| Oryza sativa spl7 mRNA for spl7 protein, complete cds Length = 1983 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 354 cccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagc 413 |||| |||||| | ||||||||||||||||||||||||||||| | ||| | |||||| Sbjct: 524 cccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagc 583 Query: 414 tcaacacatacg 425 ||||||| |||| Sbjct: 584 tcaacacctacg 595
>dbj|AB050097.1| Oryza sativa spl7 gene for spl7 protein, complete cds Length = 5579 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 354 cccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagc 413 |||| |||||| | ||||||||||||||||||||||||||||| | ||| | |||||| Sbjct: 3877 cccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagc 3936 Query: 414 tcaacacatacg 425 ||||||| |||| Sbjct: 3937 tcaacacctacg 3948
>dbj|AB050096.1| Oryza sativa (japonica cultivar-group) Spl7 mRNA for heat stress transcription factor Spl7, complete cds Length = 1983 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 354 cccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagc 413 |||| |||||| | ||||||||||||||||||||||||||||| | ||| | |||||| Sbjct: 524 cccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagc 583 Query: 414 tcaacacatacg 425 ||||||| |||| Sbjct: 584 tcaacacctacg 595
>dbj|AB050095.1| Oryza sativa (japonica cultivar-group) Spl7 gene for heat stress transcription factor Spl7, complete cds Length = 5579 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 354 cccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagc 413 |||| |||||| | ||||||||||||||||||||||||||||| | ||| | |||||| Sbjct: 3877 cccgtgacctgttgcccaagtacttcaagcacaacaacttctccagcttcatcaggcagc 3936 Query: 414 tcaacacatacg 425 ||||||| |||| Sbjct: 3937 tcaacacctacg 3948
>ref|XM_466050.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1808 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 350 ttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcgg 409 ||||| || ||| |||||||| | |||||||||||||||||||||| | ||| || ||| Sbjct: 385 ttcgcgcgcgacgtgctcccccaccacttcaagcacaacaacttctccagcttcgtccgg 444 Query: 410 cagctcaacac 420 ||||||||||| Sbjct: 445 cagctcaacac 455
>emb|Z46951.1|GMHSF29 G.max mRNA for heat shock transcription factor 29 Length = 1386 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 438 gaccggtgggagttcgccaacgactgcttccggcgaggcgaga 480 ||||| ||||| |||||||||||||| |||||||||||||||| Sbjct: 100 gaccgttgggaattcgccaacgactgtttccggcgaggcgaga 142
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 350 ttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcgg 409 ||||| || ||| |||||||| | |||||||||||||||||||||| | ||| || ||| Sbjct: 19331871 ttcgcgcgcgacgtgctcccccaccacttcaagcacaacaacttctccagcttcgtccgg 19331812 Query: 410 cagctcaacac 420 ||||||||||| Sbjct: 19331811 cagctcaacac 19331801 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 ggcggccgccgcagccgcggccgc 556 ||||||||| |||||||||||||| Sbjct: 27640418 ggcggccgcagcagccgcggccgc 27640441 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gccgccgcagccgcggccgc 556 |||||||||||||||||||| Sbjct: 19020134 gccgccgcagccgcggccgc 19020153
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 350 ttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcgg 409 ||||| || ||| |||||||| | |||||||||||||||||||||| | ||| || ||| Sbjct: 17362 ttcgcgcgcgacgtgctcccccaccacttcaagcacaacaacttctccagcttcgtccgg 17303 Query: 410 cagctcaacac 420 ||||||||||| Sbjct: 17302 cagctcaacac 17292
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 350 ttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcgg 409 ||||| || ||| |||||||| | |||||||||||||||||||||| | ||| || ||| Sbjct: 99669 ttcgcgcgcgacgtgctcccccaccacttcaagcacaacaacttctccagcttcgtccgg 99610 Query: 410 cagctcaacac 420 ||||||||||| Sbjct: 99609 cagctcaacac 99599
>emb|Z46954.1|GMHSF33 G.max mRNA for heat shock transcription factor 33 Length = 1207 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 438 gaccggtgggagttcgccaacgactgcttccggcgaggcgaga 480 ||||| ||||| |||||||||||||| |||||||||||||||| Sbjct: 130 gaccgttgggaattcgccaacgactgtttccggcgaggcgaga 172
>dbj|AK109590.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C01, full insert sequence Length = 2217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacgaagatcgt 433 ||||||||||||| ||||||||| | ||| || || ||||||||||| ||||||| ||| Sbjct: 185 tacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacgaaggtcga 244 Query: 434 gccggaccggtgggagttcgccaacga 460 ||||| | ||||||||||| ||||| Sbjct: 245 tccggatagatgggagttcgcgaacga 271
>dbj|AK101934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073P11, full insert sequence Length = 1807 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 350 ttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcgg 409 ||||| || ||| |||||||| | |||||||||||||||||||||| | ||| || ||| Sbjct: 384 ttcgcgcgcgacgtgctcccccaccacttcaagcacaacaacttctccagcttcgtccgg 443 Query: 410 cagctcaacac 420 ||||||||||| Sbjct: 444 cagctcaacac 454
>ref|NM_196523.1| Oryza sativa (japonica cultivar-group) putative auxin-induced protein (OSJNBa0006I13.10), mRNA Length = 1077 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||||||||||| | ||| || |||||||||||||| |||| Sbjct: 255 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctacg 304 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 |||| ||||||||||||| ||||||||| | || || ||||||||||| Sbjct: 117 gccgccgccgttcctgacgaagacgtacgacctggtggaggacccggc 164
>gb|AY344488.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF6 mRNA, complete cds Length = 1336 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||||||||||| | ||| || |||||||||||||| |||| Sbjct: 289 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctacg 338 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 |||| ||||||||||||| ||||||||| | || || ||||||||||| Sbjct: 151 gccgccgccgttcctgacgaagacgtacgacctggtggaggacccggc 198
>ref|XM_476842.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1956 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 ||||||||| || ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 774 tgctccccaggttcttcaagcacaacaacttctccagcttcgtcaggcagctcaacac 831 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgtac 265 |||| ||||||||||||||||||||||| Sbjct: 649 gccgccgccgttcctgaccaagacgtac 676
>gb|AY344487.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF5 mRNA, complete cds Length = 1268 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 ||||||||| || ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 349 tgctccccaggttcttcaagcacaacaacttctccagcttcgtcaggcagctcaacac 406 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgtac 265 |||| ||||||||||||||||||||||| Sbjct: 224 gccgccgccgttcctgaccaagacgtac 251
>gb|AY323488.1| Oryza sativa (japonica cultivar-group) heat stress protein (HS1) mRNA, complete cds Length = 1310 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 ||||||||| || ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 372 tgctccccaggttcttcaagcacaacaacttctccagcttcgtcaggcagctcaacac 429 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgtac 265 |||| ||||||||||||||||||||||| Sbjct: 247 gccgccgccgttcctgaccaagacgtac 274
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||||||||||| | ||| || |||||||||||||| |||| Sbjct: 14235369 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctacg 14235320 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Minus Query: 238 gccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 |||| ||||||||||||| ||||||||| | || || ||||||||||| Sbjct: 14235507 gccgccgccgttcctgacgaagacgtacgacctggtggaggacccggc 14235460 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 534 gcggccgccgcagccgcggccgcggc 559 |||||||| ||||||||||||||||| Sbjct: 14040920 gcggccgctgcagccgcggccgcggc 14040945 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 537 gccgccgcagccgcggccgcggctg 561 |||||||| |||||||||||||||| Sbjct: 17889111 gccgccgccgccgcggccgcggctg 17889135
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||||||||||| | ||| || |||||||||||||| |||| Sbjct: 107442 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctacg 107393 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Minus Query: 238 gccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 |||| ||||||||||||| ||||||||| | || || ||||||||||| Sbjct: 107580 gccgccgccgttcctgacgaagacgtacgacctggtggaggacccggc 107533
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 ||||||||| || ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 55705 tgctccccaggttcttcaagcacaacaacttctccagcttcgtcaggcagctcaacac 55762 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgtac 265 |||| ||||||||||||||||||||||| Sbjct: 55580 gccgccgccgttcctgaccaagacgtac 55607
>dbj|AK101824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067M16, full insert sequence Length = 1955 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 ||||||||| || ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 773 tgctccccaggttcttcaagcacaacaacttctccagcttcgtcaggcagctcaacac 830 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgtac 265 |||| ||||||||||||||||||||||| Sbjct: 648 gccgccgccgttcctgaccaagacgtac 675
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||||||||||| | ||| || |||||||||||||| |||| Sbjct: 14243611 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctacg 14243562 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Minus Query: 238 gccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 |||| ||||||||||||| ||||||||| | || || ||||||||||| Sbjct: 14243749 gccgccgccgttcctgacgaagacgtacgacctggtggaggacccggc 14243702 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 534 gcggccgccgcagccgcggccgcggc 559 |||||||| ||||||||||||||||| Sbjct: 14049162 gcggccgctgcagccgcggccgcggc 14049187 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 537 gccgccgcagccgcggccgcggctg 561 |||||||| |||||||||||||||| Sbjct: 17898364 gccgccgccgccgcggccgcggctg 17898388
>ref|XM_528266.1| PREDICTED: Pan troglodytes similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1) (LOC472896), mRNA Length = 2496 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 1142 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 1198
>ref|XM_418467.1| PREDICTED: Gallus gallus similar to HEAT SHOCK FACTOR PROTEIN 1 (HSF 1) (HEAT SHOCK TRANSCRIPTION FACTOR 1) (HSTF 1) (HSF 3A) (HSTF 3A) (LOC420362), partial mRNA Length = 371 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 ||||||| ||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 50 tgctcccaaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 106
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 373 gtacttcaagcacaacaacttctctaactttgtgcggcagctcaa 417 |||||||||||||||||||||||| | ||| || ||||||||||| Sbjct: 76762 gtacttcaagcacaacaacttctccagcttcgtccggcagctcaa 76718
>ref|XM_582655.2| PREDICTED: Bos taurus similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1) (HSF1), mRNA Length = 1311 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| ||||||||||||||||||| |||| | ||| ||| |||||||||||||||| Sbjct: 98 tgctgcccaagtacttcaagcacagcaacatggctagcttcgtgcggcagctcaaca 154
>ref|NM_005526.1| Homo sapiens heat shock transcription factor 1 (HSF1), mRNA Length = 2156 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 327 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 383
>gb|BC014638.1| Homo sapiens heat shock transcription factor 1, mRNA (cDNA clone MGC:1407 IMAGE:3528599), complete cds Length = 2186 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 308 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 364
>gb|BC051853.1| Homo sapiens cDNA clone IMAGE:6155276, **** WARNING: chimeric clone **** Length = 3404 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 1534 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 1590
>gb|BT009891.1| Synthetic construct Homo sapiens heat shock transcription factor 1 mRNA, partial cds Length = 1590 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 167 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 223
>gb|AC142402.2| Homo sapiens chromosome 8, clone XXfos-800107C11, complete sequence Length = 46082 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 29917 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 29861
>emb|AJ518959.1|BTA518959 Bos taurus partial hsf1 gene for heat shock transcription factor 1, exons 2-4 Length = 933 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| ||||||||||||||||||| |||| | ||| ||| |||||||||||||||| Sbjct: 106 tgctgcccaagtacttcaagcacagcaacatggctagcttcgtgcggcagctcaaca 162
>gb|BT007351.1| Homo sapiens heat shock transcription factor 1 mRNA, complete cds Length = 1590 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 167 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 223
>ref|XM_926368.1| PREDICTED: Homo sapiens similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1) (LOC642984), mRNA Length = 297 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 83 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 139
>gb|AF205589.5| Homo sapiens chromosome 8 clone CTA-393G12 map qtel, complete sequence Length = 143847 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 127261 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 127205
>dbj|AK222497.1| Homo sapiens mRNA for heat shock transcription factor 1 variant, clone: adSE00346 Length = 2148 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 321 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 377
>gb|AY892749.1| Synthetic construct Homo sapiens clone FLH024576.01L heat shock transcription factor 1 (HSF1) mRNA, partial cds Length = 1590 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 167 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 223
>gb|AY890269.1| Synthetic construct Homo sapiens clone FLH024580.01X heat shock transcription factor 1 (HSF1) mRNA, complete cds Length = 1590 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 167 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 223
>gb|AY890268.1| Synthetic construct Homo sapiens clone FLH024579.01X heat shock transcription factor 1 (HSF1) mRNA, complete cds Length = 1590 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 167 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 223
>dbj|AK072391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077L03, full insert sequence Length = 2561 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 ||||||||||||||||||||| | ||| || |||||||||||||| Sbjct: 636 cttcaagcacaacaacttctccagcttcgtccggcagctcaacac 680 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgtaccagctcgtcgaggacccggc 285 |||| ||||||||||||| ||||||||| | || || ||||||||||| Sbjct: 498 gccgccgccgttcctgacgaagacgtacgacctggtggaggacccggc 545
>dbj|AK068660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162K14, full insert sequence Length = 1994 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 373 gtacttcaagcacaacaacttctctaactttgtgcggcagctcaa 417 |||||||||||||||||||||||| | ||| || ||||||||||| Sbjct: 862 gtacttcaagcacaacaacttctccagcttcgtccggcagctcaa 906
>gb|M64673.1|HUMHSF1 Human heat shock factor 1 (TCF5) mRNA, complete cds Length = 2156 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| |||||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 327 tgctgcccaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 383
>gb|L06098.1|CHKHSF3A Chicken mRNA sequence Length = 1774 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 ||||||| ||||||||||||||||||||| | | | ||| |||||||||||||||| Sbjct: 212 tgctcccaaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaaca 268
>ref|XM_420166.1| PREDICTED: Gallus gallus similar to heat shock factor 3 - chicken (LOC422169), mRNA Length = 2462 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 ctgctccccaagtacttcaagcacaacaacttctc 396 |||||||||||||||||||| ||||||||| |||| Sbjct: 667 ctgctccccaagtacttcaaacacaacaacatctc 701
>emb|AJ628154.1| Ononis spinosa subsp. procurrens microsatellite DNA, clone di3 Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 350 ttcgcccgggacctgctccccaagtacttcaagcacaacaacttctc 396 |||||||| ||||| ||||| || |||||||| |||||||||||||| Sbjct: 178 ttcgcccgagacctcctccctaattacttcaaacacaacaacttctc 132
>emb|BX933332.2| Gallus gallus finished cDNA, clone ChEST687a8 Length = 881 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 ctgctccccaagtacttcaagcacaacaacttctc 396 |||||||||||||||||||| ||||||||| |||| Sbjct: 171 ctgctccccaagtacttcaaacacaacaacatctc 205
>gb|U82827.1|HSU82827 Human transcription factor HOXA13 (HOXA13) gene, complete cds Length = 2014 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 533 ggcggccgccgcagccgcggccgcggc 559 ||||||||||||||||||||||||||| Sbjct: 354 ggcggccgccgcagccgcggccgcggc 328
>gb|L06126.1|CHKHSF3C Chicken mRNA sequence Length = 2675 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 ctgctccccaagtacttcaagcacaacaacttctc 396 |||||||||||||||||||| ||||||||| |||| Sbjct: 179 ctgctccccaagtacttcaaacacaacaacatctc 213
>ref|XM_469147.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1137 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 289 cgacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcgga 348 ||||||| | ||||| ||| ||| ||||| || ||||||||||| ||||| || || || Sbjct: 975 cgacgacatcatctcatggaacgacgacggctccaccttcgtcgtctggcgccccgccga 916 Query: 349 gttcgcccgggacctgctcccc 370 ||||||||| ||||| |||||| Sbjct: 915 gttcgcccgcgacctcctcccc 894
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 454 ccaacgactgcttccggcgaggcgagaagcgcctgctctgcgacatacaccgccggaagg 513 ||||||| |||||||||||||| || ||| ||||||||||| |||||||| | ||||| Sbjct: 100132 ccaacgattgcttccggcgaggggaatggcggctgctctgcgagatacaccgacagaagg 100191 Query: 514 tg 515 || Sbjct: 100192 tg 100193
>emb|Z46956.1|GMHSF5 G.max mRNA for heat shock transcription factor 5 Length = 1203 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 accttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtacttcaag 382 ||||||||||| ||| | || | |||||||| ||||||| |||||||| || ||||| Sbjct: 193 accttcgtcgtttggagaccccccgagttcgctagggaccttctccccaactatttcaaa 252 Query: 383 cacaacaacttctc 396 |||||||||||||| Sbjct: 253 cacaacaacttctc 266
>dbj|AK075651.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110037G23 product:heat shock factor 1, full insert sequence Length = 1978 Score = 52.0 bits (26), Expect = 0.002 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgt-gcggcagctcaaca 419 |||| |||||||||||||||||||||||| | ||| ||| || |||||||||||||| Sbjct: 313 tgctgcccaagtacttcaagcacaacaacatggctagcttcgtggcggcagctcaaca 370
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 454 ccaacgactgcttccggcgaggcgagaagcgcctgctctgcgacatacaccgccggaagg 513 ||||||| |||||||||||||| || ||| ||||||||||| |||||||| | ||||| Sbjct: 4731542 ccaacgattgcttccggcgaggggaatggcggctgctctgcgagatacaccgacagaagg 4731483 Query: 514 tg 515 || Sbjct: 4731482 tg 4731481
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 375 acttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 |||||||||||||||||||||| | ||| || || ||||||||||| Sbjct: 20650742 acttcaagcacaacaacttctccagcttcgtccgccagctcaacac 20650697 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 tggcggcgacggccgacgcg 220 |||||||||||||||||||| Sbjct: 29601147 tggcggcgacggccgacgcg 29601128
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 375 acttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 |||||||||||||||||||||| | ||| || || ||||||||||| Sbjct: 73149 acttcaagcacaacaacttctccagcttcgtccgccagctcaacac 73104
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 454 ccaacgactgcttccggcgaggcgagaagcgcctgctctgcgacatacaccgccggaagg 513 ||||||| |||||||||||||| || ||| ||||||||||| |||||||| | ||||| Sbjct: 4750326 ccaacgattgcttccggcgaggggaatggcggctgctctgcgagatacaccgacagaagg 4750267 Query: 514 tg 515 || Sbjct: 4750266 tg 4750265
>ref|NM_121688.2| Arabidopsis thaliana HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor AT5G16820 (HSF3) transcript variant AT5G16820.1 mRNA, complete cds Length = 1776 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 368 cccaagtacttcaagcacaacaacttctc 396 |||||||| |||||||||||||||||||| Sbjct: 318 cccaagtatttcaagcacaacaacttctc 346
>ref|NM_180501.1| Arabidopsis thaliana HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor AT5G16820 (HSF3) transcript variant AT5G16820.2 mRNA, complete cds Length = 1786 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 368 cccaagtacttcaagcacaacaacttctc 396 |||||||| |||||||||||||||||||| Sbjct: 318 cccaagtatttcaagcacaacaacttctc 346
>gb|AC100500.10| Mus musculus chromosome 3, clone RP23-143I10, complete sequence Length = 179369 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 534 gcggccgccgcagccgcggccgcgg 558 ||||||||||||||||||||||||| Sbjct: 105372 gcggccgccgcagccgcggccgcgg 105396
>gb|BC053007.1| Mus musculus basic helix-loop-helix domain containing, class B5, mRNA (cDNA clone MGC:62191 IMAGE:5686844), complete cds Length = 3207 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 534 gcggccgccgcagccgcggccgcgg 558 ||||||||||||||||||||||||| Sbjct: 1380 gcggccgccgcagccgcggccgcgg 1356
>emb|Z46953.1|GMHSF34 G.max mRNA for heat shock transcription factor 34 Length = 1410 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 377 ttcaagcacaacaacttctctaactttgtgcggcagctcaa 417 |||||||||||||||||||| | |||||| || |||||||| Sbjct: 456 ttcaagcacaacaacttctccagctttgttcgacagctcaa 496
>emb|Y14068.1|ATHSF3 Arabidopsis thaliana mRNA for heat shock factor 3 Length = 1791 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 368 cccaagtacttcaagcacaacaacttctc 396 |||||||| |||||||||||||||||||| Sbjct: 319 cccaagtatttcaagcacaacaacttctc 347
>emb|AL391147.1|ATF5E19 Arabidopsis thaliana DNA chromosome 5, BAC clone F5E19 (ESSA project) Length = 77976 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 368 cccaagtacttcaagcacaacaacttctc 396 |||||||| |||||||||||||||||||| Sbjct: 64717 cccaagtatttcaagcacaacaacttctc 64745
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 525 gccgggctggcggccgccgcagccgcggc 553 ||||||||||||||||||||| ||||||| Sbjct: 744338 gccgggctggcggccgccgcaaccgcggc 744366 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 gcagccgcggcggctgtggacggg 160 ||||||||||||||||| |||||| Sbjct: 3280579 gcagccgcggcggctgtcgacggg 3280556
>dbj|AK047201.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930035F16 product:basic helix-loop-helix domain containing, class B5, full insert sequence Length = 2596 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 534 gcggccgccgcagccgcggccgcgg 558 ||||||||||||||||||||||||| Sbjct: 1114 gcggccgccgcagccgcggccgcgg 1090
>dbj|AK076228.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:4122401N01 product:BETA3 [Mus musculus], full insert sequence Length = 3108 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 534 gcggccgccgcagccgcggccgcgg 558 ||||||||||||||||||||||||| Sbjct: 1304 gcggccgccgcagccgcggccgcgg 1280
>ref|NM_021560.2| Mus musculus basic helix-loop-helix domain containing, class B5 (Bhlhb5), mRNA Length = 3108 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 534 gcggccgccgcagccgcggccgcgg 558 ||||||||||||||||||||||||| Sbjct: 1304 gcggccgccgcagccgcggccgcgg 1280
>emb|BX829666.1|CNS0A1QC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1796 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 368 cccaagtacttcaagcacaacaacttctc 396 |||||||| |||||||||||||||||||| Sbjct: 351 cccaagtatttcaagcacaacaacttctc 379
>gb|AY136633.1| Synthetic construct HSF3 DNA-binding domain/VP16 activation domain fusion protein mRNA, complete cds Length = 1236 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 368 cccaagtacttcaagcacaacaacttctc 396 |||||||| |||||||||||||||||||| Sbjct: 202 cccaagtatttcaagcacaacaacttctc 230
>gb|AF218865.1|AF218865 Mus musculus BETA3 mRNA, complete cds Length = 2827 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 534 gcggccgccgcagccgcggccgcgg 558 ||||||||||||||||||||||||| Sbjct: 1002 gcggccgccgcagccgcggccgcgg 978
>dbj|AK061433.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A01, full insert sequence Length = 1565 Score = 50.1 bits (25), Expect = 0.008 Identities = 151/194 (77%), Gaps = 8/194 (4%) Strand = Plus / Plus Query: 290 gacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggag 349 ||||| |||||||||||||| |||| ||| | | ||||| |||||| ||||| |||| Sbjct: 479 gacgaggtgatctcgtggggaaaggaggggcggtcgttcgtggtgtggaagccggtggag 538 Query: 350 ttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcgg 409 |||||||| ||||| ||||| ||||||||||| ||||||||| ||| || || Sbjct: 539 ttcgcccgcgacctcctcccgctccacttcaagcactgcaacttctcctccttcgtccgc 598 Query: 410 cagctcaacacatacg--------aagatcgtgccggaccggtgggagttcgccaacgac 461 ||||||||||| |||| ||| | ||||| || ||||||||||||||||||| | Sbjct: 599 cagctcaacacctacggtttccggaaggtggtgcccgatcggtgggagttcgccaacggc 658 Query: 462 tgcttccggcgagg 475 |||||||||||| Sbjct: 659 aacttccggcgagg 672
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 525 gccgggctggcggccgccgcagccgcggc 553 ||||||||||||||||||||| ||||||| Sbjct: 775977 gccgggctggcggccgccgcaaccgcggc 776005 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 gcagccgcggcggctgtggacggg 160 ||||||||||||||||| |||||| Sbjct: 3280981 gcagccgcggcggctgtcgacggg 3280958
>ref|NM_113182.1| Arabidopsis thaliana AT-HSFA6B; DNA binding / transcription factor AT3G22830 (AT-HSFA6B) mRNA, complete cds Length = 1538 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacata 423 |||||||||||| |||||||| | ||||| || |||||||||||||| Sbjct: 473 cttcaagcacaataacttctccagttttgtccgccagctcaacacata 520
>ref|NM_116200.1| Arabidopsis thaliana AT-HSFA7B; DNA binding / transcription factor AT3G63350 (AT-HSFA7B) mRNA, complete cds Length = 849 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgt 405 ||||||||||||||||||||||| | |||||| Sbjct: 211 tacttcaagcacaacaacttctccagctttgt 242
>ref|NM_118004.2| Arabidopsis thaliana AT-HSFA4A; DNA binding / transcription factor AT4G18880 (AT-HSFA4A) mRNA, complete cds Length = 1904 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacata 423 |||||||||||| |||||||||| |||| | || ||||| |||||||| Sbjct: 685 cttcaagcacaataacttctctagctttatccgccagcttaacacata 732
>ref|XM_469703.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1685 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||| ||||||||| | ||| || || ||||||||||| |||| Sbjct: 286 tacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 337
>gb|BT001049.1| Arabidopsis thaliana At4g18880/F13C5_50 mRNA, complete cds Length = 1206 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacata 423 |||||||||||| |||||||||| |||| | || ||||| |||||||| Sbjct: 174 cttcaagcacaataacttctctagctttatccgccagcttaacacata 221
>gb|DQ446784.1| Arabidopsis thaliana clone pENTR221-At3g63350 heat shock transcription factor family protein (At3g63350) mRNA, complete cds Length = 849 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgt 405 ||||||||||||||||||||||| | |||||| Sbjct: 211 tacttcaagcacaacaacttctccagctttgt 242
>gb|AY344486.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF4 mRNA, complete cds Length = 1322 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||| ||||||||| | ||| || || ||||||||||| |||| Sbjct: 307 tacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 358
>gb|AY332465.1| Oryza sativa (japonica cultivar-group) putative heat shock protein (HSP2) mRNA, complete cds Length = 1385 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||| ||||||||| | ||| || || ||||||||||| |||| Sbjct: 381 tacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 432
>gb|AY079374.1| Arabidopsis thaliana putative heat shock protein (At3g22830) mRNA, complete cds Length = 1252 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacata 423 |||||||||||| |||||||| | ||||| || |||||||||||||| Sbjct: 312 cttcaagcacaataacttctccagttttgtccgccagctcaacacata 359
>gb|AY045974.1| Arabidopsis thaliana putative heat shock protein (At3g22830) mRNA, complete cds Length = 1554 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacata 423 |||||||||||| |||||||| | ||||| || |||||||||||||| Sbjct: 473 cttcaagcacaataacttctccagttttgtccgccagctcaacacata 520
>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project) Length = 79153 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgt 405 ||||||||||||||||||||||| | |||||| Sbjct: 21978 tacttcaagcacaacaacttctccagctttgt 22009
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49 Length = 199075 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Minus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacata 423 |||||||||||| |||||||||| |||| | || ||||| |||||||| Sbjct: 127017 cttcaagcacaataacttctctagctttatccgccagcttaacacata 126970
>emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16M2 Length = 75106 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgt 405 ||||||||||||||||||||||| | |||||| Sbjct: 67361 tacttcaagcacaacaacttctccagctttgt 67392
>emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome 4, BAC clone F13C5 (ESSA project) Length = 119111 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Minus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacata 423 |||||||||||| |||||||||| |||| | || ||||| |||||||| Sbjct: 13647 cttcaagcacaataacttctctagctttatccgccagcttaacacata 13600
>gb|AY125512.1| Arabidopsis thaliana AT4g18880/F13C5_50 mRNA, complete cds Length = 1905 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacata 423 |||||||||||| |||||||||| |||| | || ||||| |||||||| Sbjct: 686 cttcaagcacaataacttctctagctttatccgccagcttaacacata 733
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete sequence Length = 130359 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Minus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||| ||||||||| | ||| || || ||||||||||| |||| Sbjct: 105408 tacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 105357
>gb|AY998118.1| Oryza sativa heat shock protein 41 mRNA, complete cds Length = 1945 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||| ||||||||| | ||| || || ||||||||||| |||| Sbjct: 543 tacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 594
>gb|U68561.1|ATU68561 Arabidopsis thaliana heat shock transcription factor 21 (AtHSF21) mRNA, partial cds Length = 1407 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacata 423 |||||||||||| |||||||||| |||| | || ||||| |||||||| Sbjct: 174 cttcaagcacaataacttctctagctttatccgccagcttaacacata 221
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 432 gtgccggaccggtgggagttcgccaacgactgcttccggcgagg 475 ||||| || ||||||||||||||||||| | |||||||||||| Sbjct: 114093 gtgcccgatcggtgggagttcgccaacggcaacttccggcgagg 114136 Score = 48.1 bits (24), Expect = 0.033 Identities = 108/136 (79%) Strand = Plus / Plus Query: 290 gacgacgtgatctcgtggggcgaggacgggtcgaccttcgtcgtgtggcggccggcggag 349 ||||| |||||||||||||| |||| ||| | | ||||| |||||| ||||| |||| Sbjct: 108063 gacgaggtgatctcgtggggaaaggaggggcggtcgttcgtggtgtggaagccggtggag 108122 Query: 350 ttcgcccgggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcgg 409 |||||||| ||||| ||||| ||||||||||| ||||||||| ||| || || Sbjct: 108123 ttcgcccgcgacctcctcccgctccacttcaagcactgcaacttctcctccttcgtccgc 108182 Query: 410 cagctcaacacatacg 425 ||||||||||| |||| Sbjct: 108183 cagctcaacacctacg 108198
>dbj|AB022223.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23 Length = 77273 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacata 423 |||||||||||| |||||||| | ||||| || |||||||||||||| Sbjct: 68506 cttcaagcacaataacttctccagttttgtccgccagctcaacacata 68553
>dbj|AK101182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029F08, full insert sequence Length = 1567 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 432 gtgccggaccggtgggagttcgccaacgactgcttccggcgagg 475 ||||| || ||||||||||||||||||| | |||||||||||| Sbjct: 626 gtgcccgatcggtgggagttcgccaacggcaacttccggcgagg 669 Score = 40.1 bits (20), Expect = 8.1 Identities = 80/100 (80%) Strand = Plus / Plus Query: 326 ttcgtcgtgtggcggccggcggagttcgcccgggacctgctccccaagtacttcaagcac 385 ||||| |||||| ||||| |||||||||||| ||||| ||||| ||||||||||| Sbjct: 512 ttcgtggtgtggaagccggtggagttcgcccgcgacctcctcccgctccacttcaagcac 571 Query: 386 aacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||| ||| || || ||||||||||| |||| Sbjct: 572 tgcaacttctcctccttcgtccgccagctcaacacctacg 611
>dbj|AK069579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C13, full insert sequence Length = 2042 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||| ||||||||| | ||| || || ||||||||||| |||| Sbjct: 544 tacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 595
>dbj|AP006429.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17D07, TM0322, complete sequence Length = 109570 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 374 tacttcaagcacaacaacttctctaactttgt 405 ||||||||||||||||||||||| | |||||| Sbjct: 60555 tacttcaagcacaacaacttctcaagctttgt 60524
>ref|XM_483110.1| Oryza sativa (japonica cultivar-group), mRNA Length = 992 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 533 ggcggccgccgcagccgcggccgcggc 559 |||||||||||| |||||||||||||| Sbjct: 341 ggcggccgccgcggccgcggccgcggc 367
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 516 gtccagtcggccgggctggcggccgcc 542 ||||||||||| ||||||||||||||| Sbjct: 2029421 gtccagtcggcggggctggcggccgcc 2029395
>ref|XM_585056.2| PREDICTED: Bos taurus similar to ankyrin repeat domain 43 (LOC508297), mRNA Length = 3184 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 533 ggcggccgccgcagccgcggccgcggc 559 ||||||||| ||||||||||||||||| Sbjct: 36 ggcggccgcagcagccgcggccgcggc 10
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 389 aacttctctaactttgtgcggcagctcaaca 419 |||||||| | |||||||||||||||||||| Sbjct: 30607 aacttctcgagctttgtgcggcagctcaaca 30637
>gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltransferase mRNA, partial cds Length = 1220 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 198 ggctggcggcgacggccgacgcggcgg 224 |||||| |||||||||||||||||||| Sbjct: 806 ggctggtggcgacggccgacgcggcgg 832
>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete cds Length = 1508 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 198 ggctggcggcgacggccgacgcggcgg 224 |||||| |||||||||||||||||||| Sbjct: 1071 ggctggtggcgacggccgacgcggcgg 1097
>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686H11 Length = 135273 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 533 ggcggccgccgcagccgcggccgcggc 559 |||||||||||| |||||||||||||| Sbjct: 69751 ggcggccgccgcggccgcggccgcggc 69725
>ref|XM_555558.1| Anopheles gambiae str. PEST ENSANGP00000028769 (ENSANGG00000007427), partial mRNA Length = 1992 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 74 ccggggccagatccggccggaag 96 ||||||||||||||||||||||| Sbjct: 147 ccggggccagatccggccggaag 169
>ref|XM_317553.2| Anopheles gambiae str. PEST ENSANGP00000009916 (ENSANGG00000007427), partial mRNA Length = 1785 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 74 ccggggccagatccggccggaag 96 ||||||||||||||||||||||| Sbjct: 1521 ccggggccagatccggccggaag 1543
>ref|NM_209061.1| Eremothecium gossypii ADL388Wp (ADL388W), mRNA Length = 1449 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 389 aacttctctaactttgtgcggcagctcaaca 419 |||||||| | |||||||||||||||||||| Sbjct: 253 aacttctcgagctttgtgcggcagctcaaca 283
>dbj|AK065316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P08, full insert sequence Length = 992 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 533 ggcggccgccgcagccgcggccgcggc 559 |||||||||||| |||||||||||||| Sbjct: 341 ggcggccgccgcggccgcggccgcggc 367
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 530 gctggcggccgccgcagccgcggccgcggc 559 ||||||||||||||||||||| || ||||| Sbjct: 1498815 gctggcggccgccgcagccgctgcggcggc 1498786
>ref|NM_196493.1| Oryza sativa (japonica cultivar-group) contains similarity to histone acetyltransferase GCN5 (OSJNBa0032I20.6), mRNA Length = 1752 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 534 gcggccgccgcagccgcggccgcggc 559 |||||||| ||||||||||||||||| Sbjct: 341 gcggccgctgcagccgcggccgcggc 316
>ref|NM_187764.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1140 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgt 263 |||| ||||||||||||||||||||| Sbjct: 102 gccgccgccgttcctgaccaagacgt 127 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 ||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 240 cttcaagcacaacaatttctccagcttcgtccgccagctcaacac 284
>ref|NM_022759.1| Homo sapiens endo-beta-N-acetylglucosaminidase (FLJ21865), mRNA Length = 2752 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 535 cggccgccgcagccgcggccgcggct 560 |||||||||| ||||||||||||||| Sbjct: 146 cggccgccgccgccgcggccgcggct 121
>gb|AY344489.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF7 mRNA, complete cds Length = 1403 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgt 263 |||| ||||||||||||||||||||| Sbjct: 178 gccgccgccgttcctgaccaagacgt 203 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacac 420 ||||||||||||||| ||||| | ||| || || ||||||||||| Sbjct: 316 cttcaagcacaacaatttctccagcttcgtccgccagctcaacac 360
>ref|XM_790669.1| PREDICTED: Strongylocentrotus purpuratus similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1) (LOC591088), mRNA Length = 1497 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 362 ctgctccccaagtacttcaagcacaacaac 391 |||||||| |||||||||||||||||||| Sbjct: 280 ctgctccctcagtacttcaagcacaacaac 309
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 gccgacgccgttcctgaccaagacgt 263 |||| ||||||||||||||||||||| Sbjct: 105106 gccgccgccgttcctgaccaagacgt 105081 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Minus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||||| ||||| | ||| || || ||||||||||| |||| Sbjct: 104968 cttcaagcacaacaatttctccagcttcgtccgccagctcaacacctacg 104919
>gb|AF512564.1| Homo sapiens endo-beta-N-acetylglucosaminidase mRNA, complete cds Length = 2579 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 535 cggccgccgcagccgcggccgcggct 560 |||||||||| ||||||||||||||| Sbjct: 138 cggccgccgccgccgcggccgcggct 113
>gb|AE005740.1| Caulobacter crescentus CB15 section 66 of 359 of the complete genome Length = 11134 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 109 cgccggcctgatggcggccgag 130 |||||||||||||||||||||| Sbjct: 2345 cgccggcctgatggcggccgag 2324
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 gtaccagctcgtcgaggacccg 283 |||||||||||||||||||||| Sbjct: 4915798 gtaccagctcgtcgaggacccg 4915819
>gb|AC073624.28| Homo sapiens chromosome 17, clone RP11-537K14, complete sequence Length = 145512 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 535 cggccgccgcagccgcggccgcggct 560 |||||||||| ||||||||||||||| Sbjct: 28130 cggccgccgccgccgcggccgcggct 28155
>gb|AY458843.1| Glycine max heat shock factor protein hsf8-related mRNA, complete cds Length = 1781 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 375 acttcaagcacaacaacttctc 396 |||||||||||||||||||||| Sbjct: 359 acttcaagcacaacaacttctc 380
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 534 gcggccgccgcagccgcggccgcggc 559 |||||||| ||||||||||||||||| Sbjct: 57049 gcggccgctgcagccgcggccgcggc 57074
>dbj|AK111779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078H10, full insert sequence Length = 1691 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 534 gcggccgccgcagccgcggccgcggc 559 |||||||| ||||||||||||||||| Sbjct: 456 gcggccgctgcagccgcggccgcggc 431
>dbj|AK025518.1| Homo sapiens cDNA: FLJ21865 fis, clone HEP02351 Length = 2752 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 535 cggccgccgcagccgcggccgcggct 560 |||||||||| ||||||||||||||| Sbjct: 146 cggccgccgccgccgcggccgcggct 121
>dbj|AK066844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088J01, full insert sequence Length = 2272 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 376 cttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 ||||||||||||||| ||||| | ||| || || ||||||||||| |||| Sbjct: 295 cttcaagcacaacaatttctccagcttcgtccgccagctcaacacctacg 344 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 238 gccgacgccgttcctgaccaagacgt 263 |||| ||||||||||||||||||||| Sbjct: 157 gccgccgccgttcctgaccaagacgt 182
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 533 ggcggccgccgcagccgcggccgcgg 558 |||||||| ||||||||||||||||| Sbjct: 1013272 ggcggccggcgcagccgcggccgcgg 1013297
>ref|NM_124786.3| Arabidopsis thaliana AT-HSFA9; DNA binding / transcription factor AT5G54070 (AT-HSFA9) mRNA, complete cds Length = 1258 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 368 cccaagtacttcaagcacaacaacttctc 396 ||||| |||||||||||||| |||||||| Sbjct: 369 cccaaatacttcaagcacaagaacttctc 397
>ref|NM_197084.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0029C15.17), mRNA Length = 837 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 537 gccgccgcagccgcggccgcggctg 561 |||||||| |||||||||||||||| Sbjct: 798 gccgccgccgccgcggccgcggctg 774
>ref|NM_190302.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2322 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 cggccgccgcagccgcggccgcggc 559 ||||||||||||||||| ||||||| Sbjct: 140 cggccgccgcagccgcgtccgcggc 164
>ref|XM_428455.1| PREDICTED: Gallus gallus similar to Heat shock factor protein 2 (HSF 2) (Heat shock transcription factor 2) (HSTF 2) (HSF 3B) (HSTF 3B) (LOC430903), partial mRNA Length = 279 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 100 aagtacttcaagcacaacaac 120
>ref|XM_419760.1| PREDICTED: Gallus gallus similar to Heat shock factor protein 2 (HSF 2) (Heat shock transcription factor 2) (HSTF 2) (HSF 3B) (HSTF 3B) (LOC421724), mRNA Length = 2423 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 274 aagtacttcaagcacaacaac 294
>gb|DQ487187.1| Canis familiaris heat shock transcription factor 4 variant c (HSF4) mRNA, complete cds, alternatively spliced Length = 1251 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| ||| ||||||||||||||| |||| | | | ||| |||||||||||||||| Sbjct: 173 tgctgccccagtacttcaagcacagcaacatggcgagcttcgtgcggcagctcaaca 229
>gb|DQ487186.1| Canis familiaris heat shock transcription factor 4 variant b (HSF4) mRNA, complete cds, alternatively spliced Length = 1377 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| ||| ||||||||||||||| |||| | | | ||| |||||||||||||||| Sbjct: 173 tgctgccccagtacttcaagcacagcaacatggcgagcttcgtgcggcagctcaaca 229
>gb|DQ487185.1| Canis familiaris heat shock transcription factor 4 variant a (HSF4) mRNA, complete cds, alternatively spliced Length = 1479 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| ||| ||||||||||||||| |||| | | | ||| |||||||||||||||| Sbjct: 173 tgctgccccagtacttcaagcacagcaacatggcgagcttcgtgcggcagctcaaca 229
>ref|XM_657653.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5141.2), mRNA Length = 1290 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 535 cggccgccgcagccgcggccgcggc 559 |||||||||| |||||||||||||| Sbjct: 1238 cggccgccgcggccgcggccgcggc 1214
>ref|XM_532354.2| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 1 (LOC475124), mRNA Length = 2028 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 288 aagtacttcaagcacaacaac 308
>ref|XM_852884.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 7 (LOC475124), mRNA Length = 1881 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 288 aagtacttcaagcacaacaac 308
>ref|XM_852840.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 6 (LOC475124), mRNA Length = 1854 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 288 aagtacttcaagcacaacaac 308
>ref|XM_844010.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 2 (LOC475124), mRNA Length = 1917 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 288 aagtacttcaagcacaacaac 308
>ref|XM_852764.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 5 (LOC475124), mRNA Length = 2010 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 288 aagtacttcaagcacaacaac 308
>ref|XM_852727.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 4 (LOC475124), mRNA Length = 565 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 301 aagtacttcaagcacaacaac 321
>ref|XM_852686.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 3 (LOC475124), mRNA Length = 1947 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 288 aagtacttcaagcacaacaac 308
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 533 ggcggccgccgcagccgcggccgcg 557 ||||||||||||| ||||||||||| Sbjct: 6367 ggcggccgccgcacccgcggccgcg 6391
>ref|XM_546886.2| PREDICTED: Canis familiaris similar to Heat shock factor protein 4 (HSF 4) (Heat shock transcription factor 4) (HSTF 4) (hHSF4) (LOC489766), mRNA Length = 1490 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 tgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagctcaaca 419 |||| ||| ||||||||||||||| |||| | | | ||| |||||||||||||||| Sbjct: 187 tgctgccccagtacttcaagcacagcaacatggcgagcttcgtgcggcagctcaaca 243
>ref|XM_844046.1| PREDICTED: Canis familiaris similar to CUG triplet repeat, RNA binding protein 2, transcript variant 2 (LOC607310), mRNA Length = 2670 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 gctggcggccgccgcagccgcggcc 554 ||||||||| ||||||||||||||| Sbjct: 1028 gctggcggcggccgcagccgcggcc 1052
>ref|XM_852849.1| PREDICTED: Canis familiaris similar to CUG triplet repeat, RNA binding protein 2, transcript variant 3 (LOC607310), mRNA Length = 2528 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 gctggcggccgccgcagccgcggcc 554 ||||||||| ||||||||||||||| Sbjct: 892 gctggcggcggccgcagccgcggcc 916
>gb|AY096552.1| Arabidopsis thaliana unknown protein (At5g54070) mRNA, complete cds Length = 1027 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 368 cccaagtacttcaagcacaacaacttctc 396 ||||| |||||||||||||| |||||||| Sbjct: 334 cccaaatacttcaagcacaagaacttctc 362
>gb|AY065226.1| Arabidopsis thaliana unknown protein (At5g54070) mRNA, complete cds Length = 1274 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 368 cccaagtacttcaagcacaacaacttctc 396 ||||| |||||||||||||| |||||||| Sbjct: 368 cccaaatacttcaagcacaagaacttctc 396
>emb|X67600.1|LPHSF8 L.peruvianum Lp-hsf8 mRNA for heat stress transcription factor 8 Length = 1791 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 358 ggacctgctccccaagtacttcaagcacaacaacttctctaactttgtgcggcagct 414 |||||| || ||||||||||| ||||| || ||||| || | |||||| |||||||| Sbjct: 236 ggacctacttcccaagtactttaagcataataacttttccagctttgttcggcagct 292
>emb|AL606479.16| Mouse DNA sequence from clone RP23-10G21 on chromosome 11 Contains the Scgb3a1 gene for family 3A member 1 secretoglobin, gene A230103N10Rik, a ribosomal protein L30 (Rpl30) pseudogene, a ribosomal protein S10 (Rps10) pseudogene, a ribosomal protein L29 (Rpl29) pseudogene, the Gfpt2 gene for glutamine fructose-6-phosphate transaminase 2, the Mapk9 gene for mitogen activated protein kinase 9, the 5' end of gene 9130006A14Rik and four CpG islands, complete sequence Length = 254981 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 ggggctggggcggagcctcct 178 ||||||||||||||||||||| Sbjct: 133293 ggggctggggcggagcctcct 133273
>tpg|BK005124.1| TPA: TPA_inf: Homo sapiens two transmembrane domain family member A (TTMA) mRNA, complete cds Length = 1920 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 531 ctggcggccgccgcagccgcggccgcggc 559 |||||||||||||| ||||| |||||||| Sbjct: 693 ctggcggccgccgcggccgccgccgcggc 721
>gb|AE012315.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 223 of 460 of the complete genome Length = 11231 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gccggcctgatggcggccgag 130 ||||||||||||||||||||| Sbjct: 2890 gccggcctgatggcggccgag 2910
>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence Length = 176602 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 535 cggccgccgcagccgcggccgcggc 559 |||||||||| |||||||||||||| Sbjct: 21201 cggccgccgcggccgcggccgcggc 21177 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gccgcagccgcggccgcggc 559 |||||||||||||||||||| Sbjct: 21165 gccgcagccgcggccgcggc 21184
>gb|AC090790.4| Homo sapiens chromosome 8, clone RP11-235I5, complete sequence Length = 77330 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 531 ctggcggccgccgcagccgcggccgcggc 559 |||||||||||||| ||||| |||||||| Sbjct: 12590 ctggcggccgccgccgccgctgccgcggc 12562
>gb|AC069185.7| Homo sapiens chromosome 8, clone RP11-297N6, complete sequence Length = 169079 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 531 ctggcggccgccgcagccgcggccgcggc 559 |||||||||||||| ||||| |||||||| Sbjct: 32580 ctggcggccgccgccgccgctgccgcggc 32608
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 537 gccgccgcagccgcggccgcggctg 561 |||||||| |||||||||||||||| Sbjct: 42930 gccgccgccgccgcggccgcggctg 42906
>gb|AF318320.1|AF318320 Homo sapiens pp10443 mRNA, complete cds Length = 2525 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 531 ctggcggccgccgcagccgcggccgcggc 559 |||||||||||||| ||||| |||||||| Sbjct: 643 ctggcggccgccgccgccgctgccgcggc 671
>ref|XM_928409.1| PREDICTED: Homo sapiens similar to KIAA1913 (LOC645369), mRNA Length = 2455 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 531 ctggcggccgccgcagccgcggccgcggc 559 |||||||||||||| ||||| |||||||| Sbjct: 1241 ctggcggccgccgcggccgccgccgcggc 1269
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 199 gctggcggcgacggccgacgcggcg 223 |||||||||||||| |||||||||| Sbjct: 96421 gctggcggcgacgggcgacgcggcg 96397
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 gccggcctgatggcggccgag 130 ||||||||||||||||||||| Sbjct: 2517897 gccggcctgatggcggccgag 2517877
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 gcgccggcctgatggcggccgagca 132 ||||||||||||| ||||||||||| Sbjct: 371711 gcgccggcctgattgcggccgagca 371735 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 gccgcagccgcggccgcggctggc 563 ||||||| |||||||||||||||| Sbjct: 4886683 gccgcagtcgcggccgcggctggc 4886706 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 ccgccgcagccgcggccgcg 557 |||||||||||||||||||| Sbjct: 3394862 ccgccgcagccgcggccgcg 3394843 Score = 40.1 bits (20), Expect = 8.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 523 cggccgggctggcggccgccgcagccgc 550 ||||||||||| |||||||||||||||| Sbjct: 685720 cggccgggctg-cggccgccgcagccgc 685746
>emb|BX931371.1| Gallus gallus finished cDNA, clone ChEST333i3 Length = 1193 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 204 aagtacttcaagcacaacaac 224
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035F12 Length = 153439 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 cggccgccgcagccgcggccgcggc 559 ||||||||||||||||| ||||||| Sbjct: 27311 cggccgccgcagccgcgtccgcggc 27335
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 cgcggcggctgtggacggggctggg 166 |||||||||||||||||| |||||| Sbjct: 710613 cgcggcggctgtggacggcgctggg 710589 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gaggcgccggcctgatggcg 124 |||||||||||||||||||| Sbjct: 3558154 gaggcgccggcctgatggcg 3558173
>dbj|AB018115.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJP23 Length = 31827 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 368 cccaagtacttcaagcacaacaacttctc 396 ||||| |||||||||||||| |||||||| Sbjct: 10249 cccaaatacttcaagcacaagaacttctc 10277
>emb|X15120.1|HEPVIE Pseudorabies virus immediate-early gene Length = 5123 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 531 ctggcggccgccgcagccgcggccg 555 |||||||||||||| |||||||||| Sbjct: 314 ctggcggccgccgccgccgcggccg 338
>gb|AF083095.1|AF083095 Felis catus transcription factor HOXA13 (HOXA13) gene, partial cds Length = 393 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 537 gccgccgcagccgcggccgcggctg 561 |||||||| |||||||||||||||| Sbjct: 307 gccgccgccgccgcggccgcggctg 331
>gb|BC105108.1| Homo sapiens GATA binding protein 4, mRNA (cDNA clone MGC:132768 IMAGE:8144111), complete cds Length = 1454 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 531 ctggcggccgccgcagccgcggccgcggc 559 |||||||||||||| ||||| |||||||| Sbjct: 427 ctggcggccgccgccgccgctgccgcggc 455
>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete sequence Length = 59348 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 537 gccgccgcagccgcggccgcggctg 561 |||||||||||||| |||||||||| Sbjct: 23445 gccgccgcagccgccgccgcggctg 23421
>ref|NM_002052.2| Homo sapiens GATA binding protein 4 (GATA4), mRNA Length = 3372 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 531 ctggcggccgccgcagccgcggccgcggc 559 |||||||||||||| ||||| |||||||| Sbjct: 867 ctggcggccgccgccgccgctgccgcggc 895
>gb|DQ328330.1| Cervid herpesvirus 2 isolate Salla 82 DNA polymerase gene, partial cds Length = 356 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 537 gccgccgcagccgcggccgcggctggcgc 565 |||||||| |||||||||||||| ||||| Sbjct: 121 gccgccgccgccgcggccgcggccggcgc 149
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 gctcgtcgaggacccggcggt 288 ||||||||||||||||||||| Sbjct: 203103 gctcgtcgaggacccggcggt 203083
>gb|BC101580.1| Homo sapiens GATA binding protein 4, mRNA (cDNA clone MGC:126629 IMAGE:8069086), complete cds Length = 1456 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 531 ctggcggccgccgcagccgcggccgcggc 559 |||||||||||||| ||||| |||||||| Sbjct: 429 ctggcggccgccgccgccgctgccgcggc 457
>dbj|AP005433.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-945C19, complete sequence Length = 146000 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 531 ctggcggccgccgcagccgcggccgcggc 559 |||||||||||||| ||||| |||||||| Sbjct: 134608 ctggcggccgccgcggccgccgccgcggc 134580
>gb|AY740706.1| Homo sapiens GATA binding protein 4 (GATA4) mRNA, complete cds Length = 1332 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 531 ctggcggccgccgcagccgcggccgcggc 559 |||||||||||||| ||||| |||||||| Sbjct: 352 ctggcggccgccgccgccgctgccgcggc 380
>gb|L06125.1|CHKHSF3B Chicken mRNA sequence Length = 2366 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 aagtacttcaagcacaacaac 391 ||||||||||||||||||||| Sbjct: 206 aagtacttcaagcacaacaac 226
>gb|M57505.1|SH1LLT Pseudorabies virus ORF1, ORF2, and ORF3 mRNA, complete cds Length = 8438 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 531 ctggcggccgccgcagccgcggccg 555 |||||||||||||| |||||||||| Sbjct: 6750 ctggcggccgccgccgccgcggccg 6726
>dbj|AB038999.1| Mus musculus Gfpt2 gene for glutamine fructose-6-phosphate amidotransferase 2, partial cds Length = 2513 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 ggggctggggcggagcctcct 178 ||||||||||||||||||||| Sbjct: 2392 ggggctggggcggagcctcct 2372
>ref|XM_471840.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 846 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 532 tggcggccgccgcagccgcggccg 555 ||||||||||||||| |||||||| Sbjct: 353 tggcggccgccgcagacgcggccg 330
>ref|XM_466003.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2626 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 gccgccgcagccgcggccgc 556 |||||||||||||||||||| Sbjct: 341 gccgccgcagccgcggccgc 322
>ref|XM_450740.1| Oryza sativa (japonica cultivar-group), mRNA Length = 360 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gccgccgcagccgcggccgc 556 |||||||||||||||||||| Sbjct: 46 gccgccgcagccgcggccgc 65
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 cggccgggctggcggccgcc 542 |||||||||||||||||||| Sbjct: 2584235 cggccgggctggcggccgcc 2584254
>ref|NM_191549.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 374 tacttcaagcacaacaacttctctaactttgtgcggcagctcaacacatacg 425 |||||||||||| ||||||| | | ||| || |||||||||||||| |||| Sbjct: 199 tacttcaagcaccgcaacttcgccagcttcgtccggcagctcaacacctacg 250
>ref|NM_189443.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 tggcggcgacggccgacgcggcgg 224 |||||||||||| ||||||||||| Sbjct: 2 tggcggcgacgggcgacgcggcgg 25
>ref|XM_469743.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 537 gccgccgcagccgcggccgcggctggcgccgt 568 |||||||||||||| |||||| ||| |||||| Sbjct: 215 gccgccgcagccgccgccgcgtctgccgccgt 184
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gccggcctgatggcggccga 129 |||||||||||||||||||| Sbjct: 2584974 gccggcctgatggcggccga 2584993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 cggccgccgcagccgcggcc 554 |||||||||||||||||||| Sbjct: 2245389 cggccgccgcagccgcggcc 2245408 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 tggcggccgccgcagccgcggccg 555 ||||||||||||||||| |||||| Sbjct: 1766156 tggcggccgccgcagccccggccg 1766179 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 gctggcggccgccgcagccg 549 |||||||||||||||||||| Sbjct: 317530 gctggcggccgccgcagccg 317511
>ref|XM_361119.1| Magnaporthe grisea 70-15 hypothetical protein (MG03662.4) partial mRNA Length = 1065 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 agacgtaccagctcgtcgag 277 |||||||||||||||||||| Sbjct: 356 agacgtaccagctcgtcgag 375
>gb|BC052011.1| Mus musculus forkhead box C1, mRNA (cDNA clone MGC:62340 IMAGE:5720391), complete cds Length = 2785 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 534 gcggccgccgcagccgcggccgcg 557 ||||||||||||||||| |||||| Sbjct: 1884 gcggccgccgcagccgccgccgcg 1861
>ref|NM_031166.1| Mus musculus inhibitor of DNA binding 4 (Id4), mRNA Length = 1659 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 534 gcggccgccgcagccgcggccgcggctg 561 |||||||||||||| ||||| ||||||| Sbjct: 214 gcggccgccgcagcggcggcggcggctg 187
>gb|AY596585.1| Saccharum officinarum clone SCCCST1003D04, complete sequence Length = 2616 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggccggaaggggcacaggag 107 |||||||||||||||||||| Sbjct: 2541 ggccggaaggggcacaggag 2560
>ref|NM_008592.2| Mus musculus forkhead box C1 (Foxc1), mRNA Length = 3990 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 534 gcggccgccgcagccgcggccgcg 557 ||||||||||||||||| |||||| Sbjct: 2046 gcggccgccgcagccgccgccgcg 2023
>gb|AY576676.1| Oryza sativa (japonica cultivar-group) membrane binding protein (MBP) mRNA, complete cds Length = 1255 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 532 tggcggccgccgcagccgcggccg 555 ||||||||||||||| |||||||| Sbjct: 364 tggcggccgccgcagacgcggccg 341
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gccgcggccgcggctggcgc 565 |||||||||||||||||||| Sbjct: 134738 gccgcggccgcggctggcgc 134757
>ref|XM_549179.2| PREDICTED: Canis familiaris similar to insulin receptor substrate 4 (LOC492059), mRNA Length = 4032 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 533 ggcggccgccgcagccgcggccgc 556 |||||||||||||||||| ||||| Sbjct: 399 ggcggccgccgcagccgcagccgc 376
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cgcagccgcggcggctgtgg 155 |||||||||||||||||||| Sbjct: 1825291 cgcagccgcggcggctgtgg 1825272
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 525 gccgggctggcggccgccgcagccgcggccgc 556 ||||||||| ||||||||||||||| ||||| Sbjct: 138031 gccgggctgcgggccgccgcagccgccgccgc 138062 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 525 gccgggctggcggccgccgcagccgcggccgc 556 ||||||||| ||||||||||||||| ||||| Sbjct: 104982 gccgggctgcgggccgccgcagccgccgccgc 104951 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 525 gccgggctggcggccgccgcagccgcggccgc 556 ||||||||| ||||||||||||||| ||||| Sbjct: 222 gccgggctgcgggccgccgcagccgccgccgc 253 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,695,442 Number of Sequences: 3902068 Number of extensions: 3695442 Number of successful extensions: 95577 Number of sequences better than 10.0: 337 Number of HSP's better than 10.0 without gapping: 352 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 87701 Number of HSP's gapped (non-prelim): 7818 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
