ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart38b04 |
|---|---|
| Clone Library Name | barley_pub |
>FBX17_RAT (Q6AY27) F-box only protein 17| Length = 250 Score = 38.1 bits (87), Expect = 0.016 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = +1 Query: 148 MRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPS 291 M + + +L LP ++L++L+ VP A + RC + WRDLV PS Sbjct: 10 MTEAQHMALAELPPELLLQVLSHVPPRALVTRCRPVCRAWRDLVDGPS 57
>FBX17_MOUSE (Q9QZM8) F-box only protein 17 (F-box only protein 26)| Length = 286 Score = 37.7 bits (86), Expect = 0.021 Identities = 17/49 (34%), Positives = 29/49 (59%) Frame = +1 Query: 145 EMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPS 291 +M + +L +LP +++++L+ VP A + RC + WRDLV PS Sbjct: 9 QMTEARRLALTKLPPELLVQVLSHVPPRALVTRCRPVCRAWRDLVDGPS 57
>FBX2_MOUSE (Q80UW2) F-box only protein 2| Length = 297 Score = 35.0 bits (79), Expect = 0.13 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%) Frame = +1 Query: 115 AVATASREEIEMRDPEAPS-------LVRLPEHVVLEILARVPGVADLFRCAAARKRWRD 273 A A AS EE ++R+ E L LPE ++L +LA +P + C RW++ Sbjct: 25 AGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKE 84 Query: 274 LVT-EPSFLRRRWPEG 318 LV P +L + EG Sbjct: 85 LVDGAPLWLLKCQQEG 100
>FBX27_MACFA (Q9N0C8) F-box only protein 27| Length = 280 Score = 34.7 bits (78), Expect = 0.18 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = +1 Query: 100 YSNNGAVATASREEIEMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLV 279 +++ G A E E EA L +LP ++L +L+ VP L RC + WR LV Sbjct: 4 WASRGRAARVPAPEPESEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALV 63
>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat| protein 7) (F-box protein FBL6/FBL7) Length = 491 Score = 33.9 bits (76), Expect = 0.30 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 160 EAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLR 300 E S+ RLP+H +++I + +P L RCA +RW +L +P R Sbjct: 110 EQASIDRLPDHSMVQIFSFLP-TNQLCRCARVCRRWYNLAWDPRLWR 155
>FBX44_MOUSE (Q8BK26) F-box only protein 44 (F-box only protein 6a)| Length = 255 Score = 33.5 bits (75), Expect = 0.39 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 181 LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 306 LPE+++LE+ +P L RC WRDL+ + +R+ Sbjct: 9 LPENILLELFIHIPARQLLLRCRPVCSLWRDLIDLVTLWKRK 50
>FBX6_HUMAN (Q9NRD1) F-box only protein 6 (F-box/G-domain protein 2)| Length = 293 Score = 33.5 bits (75), Expect = 0.39 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +1 Query: 169 SLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 306 S+ LPE+++LE+ VP L C WRDL+ + +R+ Sbjct: 12 SINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRK 57
>FBX6_MOUSE (Q9QZN4) F-box only protein 6 (F-box only protein 6b)| Length = 295 Score = 33.1 bits (74), Expect = 0.51 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 181 LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 306 LPE+++LE+ +P L C + WRDL+ S +R+ Sbjct: 7 LPENILLELFIHIPAPQLLRNCRLVCRLWRDLIDVVSLWKRK 48
>FBX17_HUMAN (Q96EF6) F-box only protein 17 (F-box only protein 26)| Length = 278 Score = 33.1 bits (74), Expect = 0.51 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = +1 Query: 151 RDPEAPSLV--RLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPS 291 R P PSL LP +++++L+ VP + + RC + WRD+V P+ Sbjct: 9 RLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPT 57
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 32.7 bits (73), Expect = 0.67 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%) Frame = -1 Query: 539 SAPKRTRSAPRCEASGTTRSSKRPAAPGTKE------PSRGRPGPRTDHGART 399 + PK AP+ + ++S K A PG + PS RPGPR G RT Sbjct: 155 NVPKPHAPAPKPKPGAPSKSPKPGARPGPRPGGSAGLPSAARPGPRPGAGRRT 207
>FBX44_HUMAN (Q9H4M3) F-box only protein 44 (F-box protein FBX30)| (F-box/G-domain protein 3) Length = 255 Score = 32.3 bits (72), Expect = 0.87 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +1 Query: 181 LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 306 LPE+++LE+ VP L C WRDL+ + +R+ Sbjct: 9 LPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRK 50
>FBX6_RAT (Q923V4) F-box only protein 6 (F-box only protein 6b)| (F-box/G-domain protein 2) Length = 284 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +1 Query: 181 LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 306 LPE+++LE+ VP L C WRDL+ + +R+ Sbjct: 7 LPENILLELFTHVPAPQLLRNCRLVCSLWRDLIDVMTLWKRK 48
>IF2_PASMU (P57873) Translation initiation factor IF-2| Length = 833 Score = 31.2 bits (69), Expect = 1.9 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -3 Query: 522 EERAAVRGER-HDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEE 346 EE+A + E+ A +EA A+ A E RRA+EA RR LA AEE Sbjct: 79 EEKARLEAEKAKQAKAEEAKKAQAVSAPTKAVDVEKEKRRAEEAELRRKADELARQKAEE 138
>REG1_PYRAB (Q9V2M0) Putative HTH-type transcriptional regulator PYRAB00550| Length = 155 Score = 30.8 bits (68), Expect = 2.5 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 5/59 (8%) Frame = +1 Query: 139 EIEMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCA-----AARKRWRDLVTEPSFLR 300 E+E+ DPEAP L + VL+ + R+ ++D+++ + A R +RD+ + SFL+ Sbjct: 71 EVELVDPEAPDLAK-----VLQPILRMRNISDVYKKSGEFQLAIRGTFRDVDSLNSFLK 124
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 1/75 (1%) Frame = -1 Query: 332 EQWHAPSGQRRRRKDGSVTXXXXXXXXXXXXXXXATPGTRARISSTTCSGSLTSEGASGS 153 E + P+ S T + T + SST + + TSEG+S S Sbjct: 214 ESTNTPTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSTQETAATTSEGSSSS 273 Query: 152 LISI-SSRDAVATAP 111 +I SS A+A +P Sbjct: 274 SAAITSSPKAIAYSP 288
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Frame = -3 Query: 276 EVAPALARGR---AAEEVGD---AGHARQDLQHDMLRQPHQRGRFRIPHLDLLPRR 127 + PA+ GR A+ + G AG LQH + RQPH +GR + L L P R Sbjct: 30 QAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTR 85
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 30.4 bits (67), Expect = 3.3 Identities = 31/139 (22%), Positives = 51/139 (36%), Gaps = 18/139 (12%) Frame = -3 Query: 513 AAVRGERHDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPAL-----ATLPAE 349 A G R + G+R +G GA+ P + + G RRP PA+ +PA+ Sbjct: 270 AGAGGPRPQGGPRPQGGSRPQGGS--AQGAQGAPSQERQGGGRRPSPAMMPPTPGQMPAK 327 Query: 348 EADEGGXXXXX-------------XXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHARQ 208 +GG + GR G A A R A G ++ Sbjct: 328 APGKGGRGGQAGGGAGGGFNRGGGTGGGAGRGGRRGG-TAGAFGRPGGAPRRGRKSKRQK 386 Query: 207 DLQHDMLRQPHQRGRFRIP 151 +++ ++ P+ G R+P Sbjct: 387 RNEYESMQAPNVIGGVRLP 405
>FBX27_MOUSE (Q6DIA9) F-box only protein 27| Length = 280 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +1 Query: 112 GAVATASREEIEMRDP-EAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLV 279 GA + +R DP E L RLP ++L +L+ VP L C + WR LV Sbjct: 2 GAWISRTRVPTPEPDPQEVLDLSRLPPELLLLVLSHVPPRTLLMHCRRVCRAWRALV 58
>IE68_SHV21 (Q01042) Immediate-early protein| Length = 407 Score = 30.4 bits (67), Expect = 3.3 Identities = 33/134 (24%), Positives = 47/134 (35%), Gaps = 12/134 (8%) Frame = -3 Query: 534 AEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTGAEDRP------------RRADEAG 391 AEA EE A E +A +EA A +E A++ AE+ A+E Sbjct: 126 AEAEEEEA----EEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEEAEEEAEEAEEAEEEA 181 Query: 390 ARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHAR 211 A AEEA+E +E +E A A EE +A Sbjct: 182 EEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEAEEA---EEAEEEAEEAEEEE 238 Query: 210 QDLQHDMLRQPHQR 169 ++ R PH + Sbjct: 239 EEAGPSTPRLPHYK 252
>NEST_RAT (P21263) Nestin| Length = 1805 Score = 30.0 bits (66), Expect = 4.3 Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 18/120 (15%) Frame = -3 Query: 528 AHEERAAVRGERHDAVVQEA-SGAR--DEGAKQGTTGAEDRPRRADEA------------ 394 A EE + GE DA + A SGA+ GA G +D +R D Sbjct: 1602 ADEEESGEEGEEEDADEEGAESGAQWWGSGASGGGCKVQDIAQRGDPVQESVGVSGLWDD 1661 Query: 393 ---GARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDA 223 GA PAL + + A+ G +EG++ D + VGDA Sbjct: 1662 GLRGAAANVPALEMVSQDSAEPSGSEESESASLEGEEGQVTDHLDAPQEVTSMVPGVGDA 1721
>FBX27_HUMAN (Q8NI29) F-box only protein 27 (F-box/G-domain protein 5)| Length = 283 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = +1 Query: 145 EMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLV 279 E EA L +LP ++L +L+ VP L RC + WR LV Sbjct: 17 EPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALV 61
>FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat| protein 12) (F-box protein FBL12) Length = 326 Score = 30.0 bits (66), Expect = 4.3 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = +1 Query: 169 SLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTE 285 +LV LP+ V+LEI + +P V D R + RW+ LV + Sbjct: 3 TLVELPDSVLLEIFSYLP-VRDRIRISRVCHRWKRLVDD 40
>SLT_HAEIN (P44888) Putative soluble lytic murein transglycosylase precursor| (EC 3.2.1.-) Length = 593 Score = 30.0 bits (66), Expect = 4.3 Identities = 15/58 (25%), Positives = 29/58 (50%) Frame = +1 Query: 121 ATASREEIEMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSF 294 AT ++ ++ P APS + + ++ A + + +L R A++RWR L+ F Sbjct: 331 ATQLKQAYQLNVPIAPSFTQAEQLPFKQVFAMITELRELGRNGLAKQRWRILLDNVDF 388
>FBX2_HUMAN (Q9UK22) F-box only protein 2| Length = 296 Score = 29.6 bits (65), Expect = 5.6 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%) Frame = +1 Query: 121 ATASREEIEMRDPE-----APSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVT- 282 A+A E E + E A L LPE ++L +LA +P + C RW++LV Sbjct: 25 ASAEEERPEDQQEEEAAAAAAYLDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDG 84 Query: 283 EPSFLRRRWPEG 318 P +L + EG Sbjct: 85 APLWLLKCQQEG 96
>GAK_RAT (P97874) Cyclin G-associated kinase (EC 2.7.11.1)| Length = 1305 Score = 29.6 bits (65), Expect = 5.6 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -1 Query: 497 SGTTRSSKRPAAPGTKEPSRGRPGPRTDHGART 399 S ++ + RP APGT P + +P PR R+ Sbjct: 1114 SNSSWQTTRPTAPGTSWPPQAKPAPRASEQLRS 1146
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +2 Query: 428 PVVPCLAPSSRAPLASWTTASCRSPRTAARSSCASAP 538 PV SS AP+ S TT S +P T++ + +SAP Sbjct: 421 PVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAP 457 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +2 Query: 428 PVVPCLAPSSRAPLASWTTASCRSPRTAARSSCASAP 538 PV SS AP+ S TT S +P T++ + +SAP Sbjct: 409 PVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAP 445
>MSBA_BORPE (Q7VWD8) Lipid A export ATP-binding/permease protein msbA| Length = 623 Score = 29.3 bits (64), Expect = 7.4 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -1 Query: 167 GASGSLISISSRDAVATAPLLEYY*YYKVGVHAP 66 GA G++ RDA+A A LLE+ +G+H P Sbjct: 480 GAGGTVDDARVRDALAAANLLEFVDGLPLGIHTP 513
>MSBA_BORPA (Q7W9N7) Lipid A export ATP-binding/permease protein msbA| Length = 623 Score = 29.3 bits (64), Expect = 7.4 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -1 Query: 167 GASGSLISISSRDAVATAPLLEYY*YYKVGVHAP 66 GA G++ RDA+A A LLE+ +G+H P Sbjct: 480 GAGGTVDDARVRDALAAANLLEFVDGLPLGIHTP 513
>MSBA_BORBR (Q7WH20) Lipid A export ATP-binding/permease protein msbA| Length = 623 Score = 29.3 bits (64), Expect = 7.4 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -1 Query: 167 GASGSLISISSRDAVATAPLLEYY*YYKVGVHAP 66 GA G++ RDA+A A LLE+ +G+H P Sbjct: 480 GAGGTVDDARVRDALAAANLLEFVDGLPLGIHTP 513
>TRPA_HALVO (P18284) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 277 Score = 28.9 bits (63), Expect = 9.6 Identities = 25/97 (25%), Positives = 34/97 (35%), Gaps = 4/97 (4%) Frame = -3 Query: 504 RGERHDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARR----PFPALATLPAEEADE 337 RGER D ++++ SG A+ GTTGA+ ++ R P + D Sbjct: 154 RGERLDRIMEQVSGYVYVQARLGTTGAQSSVSDQTDSSLERLTDYDVPKAVGFGISDGDH 213 Query: 336 GGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGD 226 L D VA G AE V D Sbjct: 214 AERIVASGADGIIVGSALVDIVAEGHENGDDAETVAD 250
>FGD3_MOUSE (O88842) FYVE, RhoGEF and PH domain-containing protein 3| Length = 733 Score = 28.9 bits (63), Expect = 9.6 Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 5/107 (4%) Frame = -3 Query: 537 GAEAHEERAAVRGERHDAVVQEASGA-----RDEGAKQGTTGAEDRPRRADEAGARRPFP 373 G AH + D+ +E SGA RD G ++ +E+ P P Sbjct: 39 GPGAHRGAHSSSAPAGDSSTREPSGAMKIPNRDSGIDSPSSSVASENFPCEESSEGSPSP 98 Query: 372 ALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEV 232 A+ LP+E A + ++ +G+E P + R E+V Sbjct: 99 AILGLPSETASD--SRVPQDNPQEEEDSGVGEEPDPKVTLFRPQEDV 143
>PGCA_PIG (Q29011) Aggrecan core protein (Cartilage-specific proteoglycan| core protein) (CSPCP) (Fragments) Length = 537 Score = 28.9 bits (63), Expect = 9.6 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -3 Query: 489 DAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEE 346 D VVQ S A +EG +G + E + + +PFP+ P+EE Sbjct: 447 DLVVQVTSAATEEGT-EGPSATEAPSTSEEPFPSEKPFPSEEPFPSEE 493
>TMPS9_RAT (P69526) Transmembrane protease, serine 9 (EC 3.4.21.-)| (Polyserase-1) (Polyserine protease 1) (Polyserase-I) [Contains: Serase-1; Serase-2; Serase-3] Length = 1061 Score = 28.9 bits (63), Expect = 9.6 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +2 Query: 428 PVVPCLAPSSRAPLASW-TTASCRSPRTAARSSCASAP 538 PVVP AP+ P W T+ R P T A+ + A P Sbjct: 443 PVVPTEAPAPITPSTPWPTSPESRVPNTTAKPTVAPTP 480
>CSP_PLACL (P08675) Circumsporozoite protein precursor (CS)| Length = 378 Score = 28.9 bits (63), Expect = 9.6 Identities = 36/110 (32%), Positives = 42/110 (38%), Gaps = 4/110 (3%) Frame = -3 Query: 537 GAEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTG--AEDRPRRADEAGARRPFPALA 364 GA A + A G R + A GAR E + G AED R AD GAR A A Sbjct: 118 GARAEDGARAADGARAADGARAADGARAEDGARAEDGARAEDGARAAD--GARAADGARA 175 Query: 363 TLPAEEAD--EGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAG 220 A AD A +G ++ APA R E G AG Sbjct: 176 ADGARAADGARAADGARAADGARAADGARAEDGAPAGNR-----EGGQAG 220
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 28.9 bits (63), Expect = 9.6 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 7/76 (9%) Frame = -3 Query: 537 GAEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPAL--- 367 GA A RG + G+R GAK+ A +P A + G RRP PA+ Sbjct: 179 GAPAERPAPRPRGGQAGPGDMPRPGSRPGGAKK----AGPKPGGAKQGGGRRPSPAMMPS 234 Query: 366 ----ATLPAEEADEGG 331 A +P++ + GG Sbjct: 235 HPNPAQMPSKSDNFGG 250
>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)| Length = 439 Score = 28.9 bits (63), Expect = 9.6 Identities = 30/107 (28%), Positives = 33/107 (30%) Frame = -3 Query: 534 AEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLP 355 AE A G A + + A EG AE + GA P PA P Sbjct: 32 AEGVAPAPAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAPAEGGAP 91 Query: 354 AEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHA 214 A EGG A G APA A G A G A Sbjct: 92 APAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPAPAEGEA 138
>ERYA1_SACER (Q03131) Erythronolide synthase, modules 1 and 2 (EC 2.3.1.94) (ORF| 1) (6-deoxyerythronolide B synthase I) (DEBS 1) Length = 3491 Score = 28.9 bits (63), Expect = 9.6 Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -3 Query: 429 GAEDRPR-RADEAGARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALAR 253 G+ED+ RAD ARR PA T +E A GG LG EVA LA Sbjct: 3024 GSEDQVAVRADAVRARRLSPAHVTATSEYAVPGGTILVTGGTAG-----LGAEVARWLA- 3077 Query: 252 GRAAEEV 232 GR AE + Sbjct: 3078 GRGAEHL 3084 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,049,710 Number of Sequences: 219361 Number of extensions: 1150902 Number of successful extensions: 5122 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4659 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5104 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
