>MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemotaxis protein)|
          Length = 657

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 190 TSAAASD*SSWVRRTALGGPWSSEVVSRTR 101
           T+AA  + ++ VRRTA G   +S+VVS TR
Sbjct: 386 TAAALDELTATVRRTAAGARQASDVVSTTR 415

>SYS_HUMAN (P49591) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 513

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 111 ETTSDDQGPPNAVLLTQDDQSDAAAEVTLPALLTPAVAVDEGVLRLPSHR 260
           E   DD+  P  VL   D  +DA A + +  +    + +DE +L+  + R
Sbjct: 71  EPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAER 120

>QUEF_XANOR (Q5GV34) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)|
          Length = 271

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = +3

Query: 96  SCRVLETTSDDQGPPNAVLLTQDDQSDAAAEVTLPALL 209
           S   L+ + DD GPPNA  LT   Q     EV   ALL
Sbjct: 137 SIDALDVSIDDYGPPNAAYLTAQAQ-PVVEEVLTSALL 173

>PROB_THIDA (Q3SJS7) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 374

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 117 TSDDQGPPNAVLLTQDDQSDAAAEVTLPALLTPAVAVDEGVLRLPSHRRP 266
           T+D +G  +A L    +Q  A AE     +L  + A+ EG+ RL   +RP
Sbjct: 22  TADGRGLDHAALSRWAEQIAALAEQGKEVVLVSSGAIAEGIARLGWKKRP 71

>BCCP_SHIFL (P0ABE1) Biotin carboxyl carrier protein of acetyl-CoA carboxylase|
           (BCCP)
          Length = 156

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 144 AVLLTQDDQSDAAAEVTLPALLTPAVAVDEG-VLRLP 251
           A ++ Q  QS+AAA  T+P++  PA A   G ++R P
Sbjct: 50  APMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSP 86

>BCCP_ECOLI (P0ABD8) Biotin carboxyl carrier protein of acetyl-CoA carboxylase|
           (BCCP)
          Length = 156

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 144 AVLLTQDDQSDAAAEVTLPALLTPAVAVDEG-VLRLP 251
           A ++ Q  QS+AAA  T+P++  PA A   G ++R P
Sbjct: 50  APMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSP 86

>BCCP_ECOL6 (P0ABD9) Biotin carboxyl carrier protein of acetyl-CoA carboxylase|
           (BCCP)
          Length = 156

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 144 AVLLTQDDQSDAAAEVTLPALLTPAVAVDEG-VLRLP 251
           A ++ Q  QS+AAA  T+P++  PA A   G ++R P
Sbjct: 50  APMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSP 86

>BCCP_ECO57 (P0ABE0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase|
           (BCCP)
          Length = 156

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 144 AVLLTQDDQSDAAAEVTLPALLTPAVAVDEG-VLRLP 251
           A ++ Q  QS+AAA  T+P++  PA A   G ++R P
Sbjct: 50  APMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSP 86

>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)|
          Length = 719

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 146 GVGWALVVGGGFKDAAASDGQXXXXEHGDGGKTVHCR 36
           G G     GGGFK  + S+G+      G GG+  H R
Sbjct: 681 GGGGGRFGGGGFKKGSLSNGRGFGGGGGGGGEGRHSR 717


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,848,287
Number of Sequences: 219361
Number of extensions: 427035
Number of successful extensions: 1144
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)