Clone Information

BLAST Search Result

Clone Name	bart36d01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	H1_WHEAT (P27806) Histone H1	130	4e-30
2	H1_MAIZE (P23444) Histone H1	100	5e-21
3	H1_EUPES (Q9M5W4) Histone H1	84	4e-16
4	H1_LYCPN (P40267) Histone H1	83	6e-16
5	H1_LYCES (P37218) Histone H1	78	2e-14
6	H1_PEA (P08283) Histone H1 (PsH1b) (PsH1b-40)	77	3e-14
7	H11_ARATH (P26568) Histone H1.1	77	4e-14
8	H12_ARATH (P26569) Histone H1.2	77	4e-14
9	H11_VOLCA (Q08864) Histone H1-I	62	2e-09
10	H12_VOLCA (Q08865) Histone H1-II	55	2e-07
11	H1_DICDI (P54671) Histone H1	52	2e-06
12	H13_WHEAT (P15872) Histone H1.3 (Fragments)	44	4e-04
13	H1B_STRPU (P15869) Histone H1-beta, late embryonic	42	0.001
14	H1_ASHGO (Q75C22) Histone H1	42	0.002
15	H5_CHICK (P02259) Histone H5	42	0.002
16	H1E_CHITE (P40278) Histone H1E	41	0.002
17	H1_LYTPI (P06144) Late histone H1	41	0.002
18	H1O_CHITH (Q07134) Histone H1, orphon	41	0.002
19	H1E_CHIPA (P40262) Histone H1E	41	0.002
20	H5_CAIMO (P06513) Histone H5	41	0.003
21	H1_YEAST (P53551) Histone H1	40	0.004
22	H1G_STRPU (P07796) Histone H1-gamma, late	40	0.006
23	H1_ASCIM (Q9UV33) Histone H1	39	0.014
24	H1A_OLILU (P82898) Histone H1A (Fragment)	38	0.018
25	H5_ANSAN (P02258) Histone H5	38	0.024
26	H1_TIGCA (P35060) Histone H1	37	0.041
27	H1_DROHY (P17268) Histone H1	37	0.041
28	H1B_CHITE (P40276) Histone H1B	37	0.041
29	H13_DROVI (Q94972) Histone H1.3	37	0.053
30	H12_DROVI (Q94555) Histone H1.2	37	0.053
31	H1_CANGA (Q6FJX6) Histone H1	36	0.070
32	H1A_CHITE (P40275) Histone H1A	36	0.070
33	H12_GLYBA (P40264) Histone H1-II	36	0.070
34	H1C_CHITE (P40277) Histone H1C	36	0.070
35	H13_GLYBA (P40265) Histone H1-III	36	0.070
36	H5A_XENLA (P22844) Histone H5A (XLH5A) (H1D) (H1-SA)	36	0.070
37	H1B_OLILU (P82899) Histone H1B (Fragment)	36	0.070
38	H5B_XENLA (P22845) Histone H5B (XLH5B) (H1E) (H1-SB)	36	0.091
39	H1E_STRPU (P19375) Histone H1, early embryonic	36	0.091
40	H1_DROME (P02255) Histone H1	35	0.12
41	H10_RAT (P43278) Histone H1.0 (H1(0)) (Histone H1')	35	0.12
42	H10_MOUSE (P10922) Histone H1' (H1.0) (H1(0))	35	0.12
43	H10_HUMAN (P07305) Histone H1.0 (H1(0)) (Histone H1')	35	0.12
44	H1_CHITH (P21895) Histone H1	35	0.12
45	H15_CAEEL (O01833) Histone H1.5 (Histone H1-like protein 5)	35	0.12
46	H1D_STRPU (P15870) Histone H1-delta	35	0.16
47	H11_WHEAT (P15871) Histone H1.1 (Fragment)	35	0.20
48	H1A_PLADU (P06894) Histone H1A, sperm	35	0.20
49	H11_GLYSA (P40266) Histone H1-I	35	0.20
50	H11_GLYBA (P40263) Histone H1-I	35	0.20
51	H1B_PLADU (P06895) Histone H1B, sperm	35	0.20
52	LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 prote...	34	0.26
53	H1L2_OSTED (Q86QI0) Sperm-specific H1/protamine-like protein typ...	34	0.26
54	H16_CAEEL (O16277) Putative histone H1.6 (Histone H1-like protei...	34	0.35
55	H11_DROVI (Q24704) Histone H1.1	33	0.45
56	I15RA_MOUSE (Q60819) Interleukin-15 receptor alpha chain precurs...	33	0.59
57	H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm...	33	0.59
58	H1L1_OSTED (Q86QH9) Sperm-specific H1/protamine-like protein typ...	33	0.59
59	H12_CAEEL (P15796) Histone H1.2 (Histone H1-like protein 2)	33	0.59
60	H1L5_ENSMI (P27203) Histone H1-like protein EM5 (Fragment)	33	0.77
61	H1_NEUCR (Q8J0U2) Histone H1	33	0.77
62	H11_CAEEL (P10771) Histone H1.1	33	0.77
63	H1_EMENI (Q9P8F8) Histone H1	32	1.0
64	H1_PARAN (P02256) Histone H1, gonadal	32	1.0
65	H13_CAEEL (Q19743) Histone H1.3 (Histone H1-like protein 3)	32	1.0
66	TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorti...	32	1.3
67	TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein ...	32	1.3
68	LIPA3_HUMAN (O75145) Liprin-alpha-3 (Protein tyrosine phosphatas...	32	1.7
69	H1_ECHCR (P02257) Histone H1, gonadal (Fragment)	32	1.7
70	CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)	32	1.7
71	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	32	1.7
72	BASP_MOUSE (Q91XV3) Brain acid soluble protein 1 (BASP1 protein)...	32	1.7
73	H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)	31	2.2
74	H1L_MYTCA (P22974) Sperm-specific protein PHI-2B (PL-II*) (Sperm...	30	3.8
75	PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)	30	3.8
76	IE18_PRVKA (P33479) Immediate-early protein IE180	30	3.8
77	SECD_MYCTU (Q50634) Protein-export membrane protein secD	30	3.8
78	CCD71_RAT (Q4V7C4) Coiled-coil domain-containing protein 71	30	3.8
79	ZAN_MOUSE (O88799) Zonadhesin precursor	30	3.8
80	HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)	30	3.8
81	IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 s...	30	5.0
82	IF2_PELLD (Q3B1Z8) Translation initiation factor IF-2	30	5.0
83	MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupl...	30	5.0
84	AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)	30	5.0
85	MPA5B_LOLPR (Q40237) Major pollen allergen Lol p 5b precursor (L...	30	5.0
86	CDT1_MOUSE (Q8R4E9) DNA replication factor Cdt1 (Double parked h...	30	5.0
87	ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7...	30	6.5
88	PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)	30	6.5
89	H1X_CAEEL (Q18336) Histone H1.X (Histone H1-like protein 1)	30	6.5
90	TR10C_HUMAN (O14798) Tumor necrosis factor receptor superfamily ...	29	8.5
91	BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTP...	29	8.5
92	H103_CHICK (P08285) Histone H1.03	29	8.5

>H1_WHEAT (P27806) Histone H1|
          Length = 238

 Score =  130 bits (326), Expect = 4e-30
 Identities = 78/132 (59%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
 Frame = +1

Query: 76  MSTD-AAADIPVPQVEATADPVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 252
           MSTD AAADIPVPQVE  AD  V+                                    
Sbjct: 1   MSTDVAAADIPVPQVEVAADAAVDTPAAKPAKAPKAAKAKKSTPGPKKPRVTPAHPS--- 57

Query: 253 XXXXXXXYAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAA 432
                  YAEMVSEAI ALKER GSST+AIGKFIEDKHKAHLPANFRKI+LTQIKKLVAA
Sbjct: 58  -------YAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAA 110

Query: 433 GKLTKVKASYKL 468
           GKLTKVK SYKL
Sbjct: 111 GKLTKVKGSYKL 122

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>H1_MAIZE (P23444) Histone H1|
          Length = 245

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 50/65 (76%), Positives = 56/65 (86%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           YAEMVSEAIT+LKER GSS+ AI KF+EDKHKA LP NFRK++  Q+KKLVA GKLTKVK
Sbjct: 52  YAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVK 111

Query: 454 ASYKL 468
            SYKL
Sbjct: 112 NSYKL 116

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>H1_EUPES (Q9M5W4) Histone H1|
          Length = 229

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 42/65 (64%), Positives = 53/65 (81%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           + EM+S+AI+ LKER GSS  AI KF+EDKHK  LP+NFRK++L  +KKLVA+GKL KVK
Sbjct: 54  FFEMISDAISTLKERTGSSQYAINKFVEDKHK-QLPSNFRKLLLFHLKKLVASGKLVKVK 112

Query: 454 ASYKL 468
            S+KL
Sbjct: 113 NSFKL 117

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>H1_LYCPN (P40267) Histone H1|
          Length = 202

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 39/65 (60%), Positives = 49/65 (75%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y +M+ EA+ AL E+GGSS  A+ K++EDKHK  LPANFRKI+  Q+K   A GKL K+K
Sbjct: 52  YFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIK 111

Query: 454 ASYKL 468
           ASYKL
Sbjct: 112 ASYKL 116

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>H1_LYCES (P37218) Histone H1|
          Length = 287

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 41/65 (63%), Positives = 51/65 (78%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y EM+ +AI  LKER GSS  AI KFIE+K K+ LP+NF+K++LTQ+KK VA+ KL KVK
Sbjct: 59  YFEMIKDAIVTLKERTGSSQHAITKFIEEKQKS-LPSNFKKLLLTQLKKFVASEKLVKVK 117

Query: 454 ASYKL 468
            SYKL
Sbjct: 118 NSYKL 122

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>H1_PEA (P08283) Histone H1 (PsH1b) (PsH1b-40)|
          Length = 265

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 39/65 (60%), Positives = 50/65 (76%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y EM+ +AI +LKE+ GSS  AI KFIE+K K  LPANF+K++L  +KK VA+GKL KVK
Sbjct: 65  YEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK-QLPANFKKLLLQNLKKNVASGKLIKVK 123

Query: 454 ASYKL 468
            S+KL
Sbjct: 124 GSFKL 128

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>H11_ARATH (P26568) Histone H1.1|
          Length = 274

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y EM+ +AI  LKER GSS  AI KFIE+K K  LP  FRK++L  +K+LVA+GKL KVK
Sbjct: 65  YEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-ELPPTFRKLLLLNLKRLVASGKLVKVK 123

Query: 454 ASYKL 468
           AS+KL
Sbjct: 124 ASFKL 128

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>H12_ARATH (P26569) Histone H1.2|
          Length = 273

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 39/65 (60%), Positives = 50/65 (76%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y EM+ +AI  LKER GSS  AI KFIE+KHK+ LP  FRK++L  +K+LVA+ KL KVK
Sbjct: 65  YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKS-LPPTFRKLLLVNLKRLVASEKLVKVK 123

Query: 454 ASYKL 468
           AS+K+
Sbjct: 124 ASFKI 128

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>H11_VOLCA (Q08864) Histone H1-I|
          Length = 260

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL-PANFRKIMLTQIKKLVAAGKLTKV 450
           Y EMV +AIT LKER GSS  A+ KFIE+K+   +   NF K +   +K  V  GKL KV
Sbjct: 61  YIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKV 120

Query: 451 KASYKL 468
           K S+KL
Sbjct: 121 KGSFKL 126

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>H12_VOLCA (Q08865) Histone H1-II|
          Length = 240

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL-PANFRKIMLTQIKKLVAAGKLTKV 450
           Y +MV++AI +LKER GSS  A+ KFIE K+   +    F K +   +K  V  GKL KV
Sbjct: 27  YIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKV 86

Query: 451 KASYKL 468
           K SYKL
Sbjct: 87  KNSYKL 92

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>H1_DICDI (P54671) Histone H1|
          Length = 179

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 31/65 (47%), Positives = 39/65 (60%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y  M+S AI   K+R GSS  AI K+IE  +    P  F+  +   +K+LVA G LT VK
Sbjct: 26  YQVMISTAIAHYKDRTGSSQPAIIKYIEANYNV-APDTFKTQLKLALKRLVAKGTLTMVK 84

Query: 454 ASYKL 468
           ASYKL
Sbjct: 85  ASYKL 89

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>H13_WHEAT (P15872) Histone H1.3 (Fragments)|
          Length = 31

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 30/55 (54%), Positives = 30/55 (54%)
 Frame = +1

Query: 283 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 447
           MVSEAITALKER GS                        MLTQIKKLVAAGKLTK
Sbjct: 1   MVSEAITALKERTGS------------------------MLTQIKKLVAAGKLTK 31

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>H1B_STRPU (P15869) Histone H1-beta, late embryonic|
          Length = 211

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPAN---FRKIMLTQIKKLVAAGKLTK 447
           +EMV  AITALKERGGSS  AI K+IE  +   +       ++ ++T ++K    G L +
Sbjct: 22  SEMVLAAITALKERGGSSAQAIRKYIEKNYTVDIKKQAIFIKRALITGVEK----GTLVQ 77

Query: 448 VK 453
           VK
Sbjct: 78  VK 79

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>H1_ASHGO (Q75C22) Histone H1|
          Length = 225

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 24/60 (40%), Positives = 36/60 (60%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y +++ EA+ +L ERGGSS  AI KFI DK+   + A F       +K+ + AG+L + K
Sbjct: 27  YKDLIVEAVVSLAERGGSSRQAIKKFIRDKYA--VGAKFDGQFNLAVKRGLEAGELAQPK 84

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>H5_CHICK (P02259) Histone H5|
          Length = 189

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 24/60 (40%), Positives = 38/60 (63%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y+EM++ AI A K RGGSS  +I K+I+  +K    A+ +  +   I++L+AAG L + K
Sbjct: 28  YSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVGHNADLQ--IKLSIRRLLAAGVLKQTK 85

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>H1E_CHITE (P40278) Histone H1E|
          Length = 237

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 25/59 (42%), Positives = 34/59 (57%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +EMV  AIT LKERGGSS +AI KF+  ++K  +       +   +K  VA G L + K
Sbjct: 55  SEMVVNAITTLKERGGSSLIAIKKFVAAQYKVDV-EKLVPFIKKFLKASVAKGTLLQAK 112

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>H1_LYTPI (P06144) Late histone H1|
          Length = 210

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL--PANFRKIMLTQIKKLVAAGKLTKV 450
           ++MV  AITALKERGGSS  AI K+I   +K  +   A F K     +K  VA G L +V
Sbjct: 22  SQMVVAAITALKERGGSSNQAIKKYIAANYKVDINKQATFIK---RALKAGVANGTLVQV 78

Query: 451 K 453
           K
Sbjct: 79  K 79

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>H1O_CHITH (Q07134) Histone H1, orphon|
          Length = 244

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 24/59 (40%), Positives = 34/59 (57%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +EMV  A+T LKERGGSS +AI KF+  ++K  +       +   +K  VA G L + K
Sbjct: 58  SEMVVNAVTTLKERGGSSLIAIKKFVAAQYKVDV-EKLVPFIKKFLKSSVAKGTLLQAK 115

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>H1E_CHIPA (P40262) Histone H1E|
          Length = 235

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 25/59 (42%), Positives = 34/59 (57%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +EMV  AIT LKERGGSS +AI KF+  ++K  +       +   +K  VA G L + K
Sbjct: 55  SEMVVNAITTLKERGGSSLIAIKKFVAAQYKVDV-EKLVPFIKKFLKASVAKGTLLQAK 112

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>H5_CAIMO (P06513) Histone H5|
          Length = 193

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y+EM+  AI A K RGGSS  +I K+++  +K    A+ +  +   I++L+AAG L + K
Sbjct: 29  YSEMIVAAIRAEKSRGGSSRQSIQKYVKSHYKVGQHADLQ--IKLSIRRLLAAGVLKQTK 86

Query: 454 -----ASYKL 468
                 SY+L
Sbjct: 87  GVGASGSYRL 96

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>H1_YEAST (P53551) Histone H1|
          Length = 258

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK-AHLPANFRKIMLTQIKKLVAAGKLTKV 450
           Y E++ E +TALKER GSS  A+ KFI++ +      +NF       IKK V AG   + 
Sbjct: 47  YRELIIEGLTALKERKGSSRPALKKFIKENYPIVGSASNFDLYFNNAIKKGVEAGDFEQP 106

Query: 451 K 453
           K
Sbjct: 107 K 107



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL--PANFRKIMLTQIKKLVAAGKLTK 447
           Y EM+ +++  L +  GSS + + K+++D   + L   +NF  +  + IKK V  G+L +
Sbjct: 180 YKEMILKSMPQLNDGKGSSRIVLKKYVKDTFSSKLKTSSNFDYLFNSAIKKCVENGELVQ 239

Query: 448 VK 453
            K
Sbjct: 240 PK 241

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>H1G_STRPU (P07796) Histone H1-gamma, late|
          Length = 217

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 25/59 (42%), Positives = 34/59 (57%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           ++MV  A+TALKERGGSST AI K+I   +   +      I    +K  VA+G L + K
Sbjct: 22  SQMVVAAVTALKERGGSSTQAIKKYIAANYTVDMTKQGPFIRRALVKG-VASGALVQTK 79

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>H1_ASCIM (Q9UV33) Histone H1|
          Length = 213

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK 369
           Y EM+++AIT LKER GSS  AI KFI+   K
Sbjct: 30  YKEMLTKAITELKERNGSSRQAIKKFIQSNFK 61

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>H1A_OLILU (P82898) Histone H1A (Fragment)|
          Length = 47

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIML 405
           Y +MV +AI ALK+R GSS  AI K+IE   K     ++ +  L
Sbjct: 3   YYDMVKDAIVALKDRNGSSMQAIKKYIEANQKVEFKQHYLRAAL 46

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>H5_ANSAN (P02258) Histone H5|
          Length = 193

 Score = 37.7 bits (86), Expect = 0.024
 Identities = 21/60 (35%), Positives = 36/60 (60%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y+EM++ AI A K RGGSS  +I K+++  +K    A+ +  +   I++L+  G L + K
Sbjct: 29  YSEMIAAAIRADKSRGGSSRQSIQKYVKSHYKVGQHADLQ--IKLAIRRLLTTGVLKQTK 86

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>H1_TIGCA (P35060) Histone H1|
          Length = 181

 Score = 37.0 bits (84), Expect = 0.041
 Identities = 25/59 (42%), Positives = 31/59 (52%)
 Frame = +1

Query: 283 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVKAS 459
           MV  AI ALKER GSS  AI K+I   +K  +  N   I    +K LV   KL + K +
Sbjct: 27  MVMAAIKALKERNGSSLPAIKKYIAANYKVDVVKNAHFIK-KALKSLVEKKKLVQTKGA 84

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>H1_DROHY (P17268) Histone H1|
          Length = 249

 Score = 37.0 bits (84), Expect = 0.041
 Identities = 23/58 (39%), Positives = 31/58 (53%)
 Frame = +1

Query: 280 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +MV  +I  LKERGGSS +AI K+I   +K          +   +K  VA GKL + K
Sbjct: 51  QMVDASIQNLKERGGSSLLAIKKYISATYKCD-AQKLAPFIKKYLKNSVANGKLIQTK 107

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>H1B_CHITE (P40276) Histone H1B|
          Length = 232

 Score = 37.0 bits (84), Expect = 0.041
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +EMV  A+  LKERGGSS  AI KF+  ++K  +       +   +K  V  G+L + K
Sbjct: 44  SEMVVNAVKTLKERGGSSLQAIKKFLVAQYKVDVD-KLAPFIKKYLKSAVEKGQLLQTK 101

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>H13_DROVI (Q94972) Histone H1.3|
          Length = 250

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 23/58 (39%), Positives = 31/58 (53%)
 Frame = +1

Query: 280 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +MV  +I  LKERGGSS +AI K+I   +K          +   +K  VA GKL + K
Sbjct: 50  QMVDASIKNLKERGGSSLLAIKKYIGATYKCD-AQKLAPFIKKYLKNAVANGKLIQTK 106

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>H12_DROVI (Q94555) Histone H1.2|
          Length = 250

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 23/58 (39%), Positives = 31/58 (53%)
 Frame = +1

Query: 280 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +MV  +I  LKERGGSS +AI K+I   +K          +   +K  VA GKL + K
Sbjct: 50  QMVDASIKNLKERGGSSLLAIKKYIGATYKCD-AQKLAPFIKKYLKNAVANGKLIQTK 106

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>H1_CANGA (Q6FJX6) Histone H1|
          Length = 229

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLP--ANFRKIMLTQIKKLVAAGKLTK 447
           Y EM+   + ++    G+S +A+ KFI+DK+  ++    NF  ++   IKK V +G+L++
Sbjct: 149 YREMILTGVLSMNNGKGASRMALKKFIKDKYPTNVEKVVNFDYLVNNAIKKGVESGELSQ 208



 Score = 29.3 bits (64), Expect = 8.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKH 366
           Y  ++ E + AL    G+S VA+ K+I+D H
Sbjct: 14  YKNLIIEGLKALNNGKGASRVALKKYIKDNH 44

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>H1A_CHITE (P40275) Histone H1A|
          Length = 232

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           ++MV  A+  LKERGGSS  AI KF+  ++K  +       +   +K  V  G+L + K
Sbjct: 44  SDMVVNAVKTLKERGGSSVQAIKKFLVAQYKVDVD-KLSPFIKKYLKSAVEKGQLLQTK 101

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>H12_GLYBA (P40264) Histone H1-II|
          Length = 232

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 447
           +EMV  AI  LKERGGSS  AI KF+  ++K  +     + +   IKK +  G + K
Sbjct: 44  SEMVVNAIKTLKERGGSSLQAIKKFLVAQYKVDV-----EKLAPFIKKYLKGGAVVK 95

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>H1C_CHITE (P40277) Histone H1C|
          Length = 221

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +EMV  A+  LKERGGSS  AI KF+  ++K  +       +   +K  V  G+L + K
Sbjct: 43  SEMVFNAVKTLKERGGSSLQAIKKFLIAQYKVDVD-KLDTFIKKYLKSAVEKGQLLQTK 100

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>H13_GLYBA (P40265) Histone H1-III|
          Length = 228

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +EMV  AI  LKERGGSS  AI KF+  ++K  +       +   ++  V  G+L + K
Sbjct: 44  SEMVVNAIKTLKERGGSSLQAIKKFLAAQYKVDVD-KLAPFIKKYLRGAVTKGELLQTK 101

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>H5A_XENLA (P22844) Histone H5A (XLH5A) (H1D) (H1-SA)|
          Length = 196

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 21/60 (35%), Positives = 35/60 (58%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y++M+  A+ A K R GSS  +I K+I++ +K  +  N    +   IK+LV +G L + K
Sbjct: 28  YSDMILAAVQAEKSRSGSSRQSIQKYIKNHYK--VGENADSQIKLSIKRLVTSGALKQTK 85

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>H1B_OLILU (P82899) Histone H1B (Fragment)|
          Length = 42

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANF 390
           Y E++  AI ALKER GSS  AI K+I + +K      F
Sbjct: 2   YYELIKAAILALKERNGSSAQAIKKYILENNKIEFQQTF 40

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>H5B_XENLA (P22845) Histone H5B (XLH5B) (H1E) (H1-SB)|
          Length = 194

 Score = 35.8 bits (81), Expect = 0.091
 Identities = 20/60 (33%), Positives = 35/60 (58%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y++M+ +A+ A K R GSS  +I K+I++ +   +  N    +   IK+LV +G L + K
Sbjct: 26  YSDMILDAVQAKKSRSGSSRQSIQKYIKNNYT--VGENADSQIKLSIKRLVTSGTLKQTK 83

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>H1E_STRPU (P19375) Histone H1, early embryonic|
          Length = 205

 Score = 35.8 bits (81), Expect = 0.091
 Identities = 24/59 (40%), Positives = 30/59 (50%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           AEMV+ AIT LK+R GSS  AI K+I       +      I    +K  V  GKL + K
Sbjct: 22  AEMVATAITELKDRNGSSLQAIKKYIATNFDVQMDRQLLFIK-RALKSGVEKGKLVQTK 79

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>H1_DROME (P02255) Histone H1|
          Length = 256

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 22/58 (37%), Positives = 30/58 (51%)
 Frame = +1

Query: 280 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +MV  +I  LKERGGSS +AI K+I   +K          +   +K  V  GKL + K
Sbjct: 51  QMVDASIKNLKERGGSSLLAIKKYITATYKCD-AQKLAPFIKKYLKSAVVNGKLIQTK 107

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>H10_RAT (P43278) Histone H1.0 (H1(0)) (Histone H1')|
          Length = 193

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 22/60 (36%), Positives = 33/60 (55%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y++M+  AI A K R GSS  +I K+I+  +K  +  N    +   IK+LV  G L + K
Sbjct: 27  YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYK--VGENADSQIKLSIKRLVTTGVLKQTK 84

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>H10_MOUSE (P10922) Histone H1' (H1.0) (H1(0))|
          Length = 193

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 22/60 (36%), Positives = 33/60 (55%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y++M+  AI A K R GSS  +I K+I+  +K  +  N    +   IK+LV  G L + K
Sbjct: 27  YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYK--VGENADSQIKLSIKRLVTTGVLKQTK 84

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>H10_HUMAN (P07305) Histone H1.0 (H1(0)) (Histone H1')|
          Length = 193

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 22/60 (36%), Positives = 33/60 (55%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y++M+  AI A K R GSS  +I K+I+  +K  +  N    +   IK+LV  G L + K
Sbjct: 27  YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYK--VGENADSQIKLSIKRLVTTGVLKQTK 84

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>H1_CHITH (P21895) Histone H1|
          Length = 231

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 21/59 (35%), Positives = 31/59 (52%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           ++M+  AI  LKERGGSS  AI KF+  ++K          +   +K  V  G+L + K
Sbjct: 43  SDMIVNAIKTLKERGGSSVQAIKKFLVAQYKVDTD-KLSPFIKKYLKSAVEKGQLLQTK 100

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>H15_CAEEL (O01833) Histone H1.5 (Histone H1-like protein 5)|
          Length = 224

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 9/56 (16%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKH---------KAHLPANFRKIMLTQI 414
           +  M++EA++ LK+R GSS VAI KFI  K+          AHL +  +K +++++
Sbjct: 40  FINMITEAVSNLKDRKGSSRVAIFKFITAKYTLGDQVNKTNAHLRSALKKGVVSKV 95

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>H1D_STRPU (P15870) Histone H1-delta|
          Length = 185

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 21/62 (33%), Positives = 36/62 (58%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y++M++ A+ +LKE+ GSS  AI K+++        AN    +   +K+ V +G+L  VK
Sbjct: 36  YSDMIASALESLKEKKGSSRQAILKYVKANFTVGDNANVH--IKQALKRGVTSGQLRHVK 93

Query: 454 AS 459
            S
Sbjct: 94  GS 95

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>H11_WHEAT (P15871) Histone H1.1 (Fragment)|
          Length = 25

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 18/22 (81%), Positives = 18/22 (81%)
 Frame = +1

Query: 283 MVSEAITALKERGGSSTVAIGK 348
           MVSEAI ALKER GSS  AIGK
Sbjct: 1   MVSEAIAALKEREGSSEFAIGK 22

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>H1A_PLADU (P06894) Histone H1A, sperm|
          Length = 121

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 24/64 (37%), Positives = 33/64 (51%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVKA 456
           A MV  AI  LKER GSS VAI K+I   ++  + A     +   I+K V   K T    
Sbjct: 15  ATMVVTAILGLKERKGSSMVAIKKYIAANYRVDV-ARLAPFIRKFIRKAVKQTKGTGASG 73

Query: 457 SYKL 468
           S+++
Sbjct: 74  SFRV 77

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>H11_GLYSA (P40266) Histone H1-I|
          Length = 233

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 20/61 (32%), Positives = 33/61 (54%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVKA 456
           +EMV  A+  L E+GGSS +AI KF+   +K  +       +   +K  V  G++ +VK 
Sbjct: 56  SEMVVNALKTLNEKGGSSVIAIKKFLVATYKVEI-EKLLPFIKKFLKGAVLKGEVLQVKG 114

Query: 457 S 459
           +
Sbjct: 115 T 115

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>H11_GLYBA (P40263) Histone H1-I|
          Length = 233

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 20/61 (32%), Positives = 33/61 (54%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVKA 456
           +EMV  A+  L E+GGSS +AI KF+   +K  +       +   +K  V  G++ +VK 
Sbjct: 56  SEMVVNALKTLNEKGGSSVIAIKKFLVATYKVEI-EKLLPFIKKFLKGAVLKGEVLQVKG 114

Query: 457 S 459
           +
Sbjct: 115 T 115

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>H1B_PLADU (P06895) Histone H1B, sperm|
          Length = 119

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = +1

Query: 277 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVKA 456
           A  V  AI  LK+R GSS VAI K++   +   + A     +   ++K VA G L + K 
Sbjct: 13  ATAVVAAILGLKDRKGSSMVAIKKYLAANYNVDV-ARLGPFIRRFVRKAVAEGMLVQNKG 71

Query: 457 SYKL 468
           S+++
Sbjct: 72  SFRV 75

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>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 399 HADADQEAGRRRQADQGQGLLQARQGPRSPQEAQDQGA 512
           HA   Q+A +  QA Q Q   QA+Q P++PQ  Q Q A
Sbjct: 680 HAQPPQQAQKAPQAQQAQQAQQAQQAPQAPQTPQPQQA 717

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>H1L2_OSTED (Q86QI0) Sperm-specific H1/protamine-like protein type 2 precursor|
           [Contains: Sperm-specific protein OE2 (Sperm-specific
           linker histone H1-like protein OE2); Sperm-specific
           protein OE3 (Protamine-like OS3)] (Fragment)
          Length = 126

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 21/59 (35%), Positives = 31/59 (52%)
 Frame = +1

Query: 283 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVKAS 459
           M+  AITA+K R GSS  AI K+I   +K    ++    M     K + +G L ++K S
Sbjct: 12  MIVAAITAMKNRKGSSVQAIRKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVRLKTS 70

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>H16_CAEEL (O16277) Putative histone H1.6 (Histone H1-like protein 6)|
          Length = 189

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKI---MLTQIKKLVAAGKLT 444
           +  MV+ AI++LKER GSS +AI K+I   +K  L    +KI   + + +KK VA+  L 
Sbjct: 37  FINMVTAAISSLKERKGSSKIAILKYITANYK--LGDQVKKINSNLRSALKKGVASKALV 94

Query: 445 K 447
           +
Sbjct: 95  Q 95

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>H11_DROVI (Q24704) Histone H1.1|
          Length = 250

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = +1

Query: 280 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           +MV  +I  LKERGGSS +AI K+I   +K          +   +K  VA G + + K
Sbjct: 50  QMVDASIKNLKERGGSSLLAIKKYIGATYKCD-AQKLAPFIKKYLKNAVANGNVIQTK 106

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>I15RA_MOUSE (Q60819) Interleukin-15 receptor alpha chain precursor|
           (IL-15R-alpha) (IL-15RA)
          Length = 263

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +1

Query: 13  PASPSPPAKDTPARSPRSPAAMSTDAA 93
           P SPSP AK+  A SP+S  AM+T+ A
Sbjct: 120 PESPSPSAKEPEAFSPKSDTAMTTETA 146

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>H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific|
           linker histone H1-like protein) [Contains:
           Sperm-specific protein PHI-3 (Protamine-like protein
           PHI-3) (PL-IV)]
          Length = 202

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 283 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVKAS 459
           M+  AITA+K R GSS  AI K+I   +K    ++    M     K + +G L + K S
Sbjct: 47  MIVAAITAMKNRKGSSVQAIRKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVRPKTS 105

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>H1L1_OSTED (Q86QH9) Sperm-specific H1/protamine-like protein type 1 precursor|
           [Contains: Sperm-specific protein OE1 (Sperm-specific
           linker histone H1-like protein OE1); Sperm-specific
           protein OE3 (Protamine-like OS3)]
          Length = 202

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 283 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVKAS 459
           M+  AITA+K R GSS  AI K+I   +K    ++    M     K + +G L + K S
Sbjct: 48  MIVAAITAMKNRKGSSVQAIRKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVRPKTS 106

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>H12_CAEEL (P15796) Histone H1.2 (Histone H1-like protein 2)|
          Length = 190

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK 369
           +  MV+ AI++LKER GSS +AI K+I   +K
Sbjct: 40  FINMVTAAISSLKERKGSSKIAILKYITANYK 71

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>H1L5_ENSMI (P27203) Histone H1-like protein EM5 (Fragment)|
          Length = 36

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +1

Query: 283 MVSEAITALKERGGSSTVAIGKFIEDKHK 369
           M++ A+ ALKERGGSS  AI K+I+   K
Sbjct: 1   MITAAVGALKERGGSSRQAILKYIQANFK 29

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>H1_NEUCR (Q8J0U2) Histone H1|
          Length = 236

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFI 354
           Y +M+++AI ALK+R GSS  A+ K++
Sbjct: 40  YLDMITDAIVALKDRAGSSRQALKKYV 66

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>H11_CAEEL (P10771) Histone H1.1|
          Length = 207

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK 369
           Y  M+ EAI  LK+R G+S  AI KFI   +K
Sbjct: 40  YINMIKEAIKQLKDRKGASKQAILKFISQNYK 71

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>H1_EMENI (Q9P8F8) Histone H1|
          Length = 200

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 20/54 (37%), Positives = 31/54 (57%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAG 435
           Y +M+ +AI  LKER GSS  +I K++   +K   PA+ +    +Q  K + AG
Sbjct: 22  YRDMIKDAILNLKERNGSSRQSIKKYVLANNKL-APAS-QNAFDSQFNKAIKAG 73

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>H1_PARAN (P02256) Histone H1, gonadal|
          Length = 248

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
 Frame = +1

Query: 280 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFR---KIMLTQIKKL----VAAGK 438
           EMV  AITA+KER GSS   I        K+++ AN+R    ++   +++     VA+G 
Sbjct: 47  EMVQAAITAMKERKGSSAAKI--------KSYMAANYRVDMNVLAPHVRRALRNGVASGA 98

Query: 439 LTKV 450
           L +V
Sbjct: 99  LKQV 102

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>H13_CAEEL (Q19743) Histone H1.3 (Histone H1-like protein 3)|
          Length = 207

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFI 354
           Y  MV+ AI  LKER GSS +AI K+I
Sbjct: 40  YINMVTAAINGLKERKGSSKIAILKYI 66

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>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)|
          Length = 1287

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
 Frame = +1

Query: 13  PASPSPPA-------KDTP-ARSPRSPAAMSTDAAADIPVPQVEATADPVVE 144
           PASP+PPA       + TP A SPR P + ++ AA DI  P   +    V+E
Sbjct: 758 PASPAPPAPASAFPPRVTPQAISPRGPTSPASPAALDISEPLAVSVPPAVLE 809

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>TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein tatB homolog|
          Length = 141

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 135
           +P+ P+PP   TPA  P   AA    AA+  P P  E   +P
Sbjct: 100 APSVPTPPPTSTPAVPPADAAAPPAVAASTPPSPPSETPRNP 141



 Score = 29.6 bits (65), Expect = 6.5
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +1

Query: 4   QLSPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVV 141
           Q  P    PPA ++PA S  +P   ST A     VP  +A A P V
Sbjct: 85  QNPPQETPPPAAESPAPSVPTPPPTSTPA-----VPPADAAAPPAV 125

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>LIPA3_HUMAN (O75145) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-3)
           (PTPRF-interacting protein alpha-3)
          Length = 1194

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +1

Query: 16  ASPSPPAK--DTPARSPRSPAAMSTDAAADIPVPQVEA 123
           ASPSPP+    TP  +P SPA   TD A  +P  +  A
Sbjct: 665 ASPSPPSSGHSTPRLAPPSPAREGTDKANHVPKEEAGA 702

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>H1_ECHCR (P02257) Histone H1, gonadal (Fragment)|
          Length = 171

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +1

Query: 280 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPA---NFRKIMLTQIK 417
           +M++ AI A KER GSS   I  +I  K++  + A   + R+ +  Q+K
Sbjct: 43  DMITAAIAAQKERRGSSVAKIQSYIAAKYRCDINALNPHIRRALKNQVK 91

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>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 13   PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATAD 132
            P SP  PA   PA+ PR+ AA +  AAA    P+  +  D
Sbjct: 1328 PPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGD 1367

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 135
           SPA PSPP+   P+ SP +P + S  + A  P+P   A   P
Sbjct: 115 SPAPPSPPSPAPPSPSPPAPPSPSPPSPAP-PLPPSPAPPSP 155



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 135
           SPA PSPP+   P+ +P SPA  S   A   P P   A   P
Sbjct: 72  SPAPPSPPSPAPPSPAPPSPAPPS--PAPPSPAPPSPAPPSP 111



 Score = 29.6 bits (65), Expect = 6.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVP 111
           SP+ P+PP+   P+ +P SPA  S    A  P P
Sbjct: 235 SPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPP 268



 Score = 29.6 bits (65), Expect = 6.5
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 10  SPASPSPPAKDTPA-RSPRSPAAMSTDAAADIPVPQVEATADPV 138
           +P SP+PP   +PA  SP SPA  S  + A  P P   A   PV
Sbjct: 203 APPSPAPPVPPSPAPPSPPSPAPPSPPSPAP-PSPSPPAPPSPV 245



 Score = 29.6 bits (65), Expect = 6.5
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPA-AMSTDAAADIPVPQVEATADPVV 141
           +P SPSPPA  +P  SP SPA  +    A   P P V  +  P V
Sbjct: 125 APPSPSPPAPPSP--SPPSPAPPLPPSPAPPSPSPPVPPSPSPPV 167



 Score = 29.6 bits (65), Expect = 6.5
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 135
           +P SP+PP+   P+ +P SPA  S  + A  P P   A   P
Sbjct: 97  APPSPAPPSPAPPSPAPPSPAPPSPPSPAP-PSPSPPAPPSP 137



 Score = 29.3 bits (64), Expect = 8.5
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 13  PASPSPPAKDTPA-RSPRSPAAMS-TDAAADIPVPQVEATADP 135
           P SP+PP+  +PA  SP SPA  S +  A   PVP   A   P
Sbjct: 212 PPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSP 254

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>BASP_MOUSE (Q91XV3) Brain acid soluble protein 1 (BASP1 protein) (Neuronal|
           axonal membrane protein NAP-22) (22 kDa neuronal
           tissue-enriched acidic protein)
          Length = 225

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 144
           S A P+P +K+TPA      A+ +  +AA  P P   A A+P  E
Sbjct: 171 SSAEPAPSSKETPA------ASEAPSSAAKAPAPAAPAAAEPQAE 209

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>H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)|
          Length = 252

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPAN 387
           +  MV+EAI+++K+R G S  AI K+I  K+     AN
Sbjct: 54  FINMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQAN 91

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>H1L_MYTCA (P22974) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific|
           linker histone H1-like protein)
          Length = 148

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +1

Query: 283 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVKAS 459
           M+  AI A+K R GSS  AI K+I   +K    +     M     K + +G L + K S
Sbjct: 47  MIVAAIQAMKNRKGSSVQAIRKYILANNKGINTSRLGSAMKLAFAKGLKSGVLVRPKTS 105

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>PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 239

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 144
           S  +  PPAK TPAR+   PA  ++ A A  P+P   +    +V+
Sbjct: 193 STGTGRPPAK-TPARAEEPPAPAASPAPATAPLPDARSPLQKLVD 236

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>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 22  PSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 135
           PSPPA   PA +PR  A+ ++ +AA  P P  E    P
Sbjct: 418 PSPPA---PAAAPRPSASSASSSAAASPAPAPEPARPP 452

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>SECD_MYCTU (Q50634) Protein-export membrane protein secD|
          Length = 573

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATA-DP 135
           +PASP P A+  P     +P+   T  A+  P P  EA A DP
Sbjct: 158 APASPQPGAQPRPYPQDPAPSPNPTSPASPPPAPPAEAPATDP 200

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>CCD71_RAT (Q4V7C4) Coiled-coil domain-containing protein 71|
          Length = 436

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 1   TQLSPASPSPPAKDTPARSPRSPAAMSTDAAADIPVP 111
           T+L   + +PPA   PAR+P++  ++ T     +PVP
Sbjct: 84  TKLQARTINPPATSLPARAPQTAKSVPTGQTTLLPVP 120

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>ZAN_MOUSE (O88799) Zonadhesin precursor|
          Length = 5376

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 1   TQLSPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 144
           T +SP   S P ++T +    + +   T    ++P+  +EATA P  E
Sbjct: 724 TNVSPEETSVPTEETISTEVTTVSPEETTVPTEVPIVLIEATASPTGE 771

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>HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)|
          Length = 176

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 19/63 (30%), Positives = 35/63 (55%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 453
           Y EM+ + + AL E  GS+  AI K+IE  +   LP     ++ + + K+  +G+L+  +
Sbjct: 15  YPEMIVKTLEALNEPNGSNKSAISKYIETTY-GELPD--ATVLGSHLNKMKDSGELSFKQ 71

Query: 454 ASY 462
            +Y
Sbjct: 72  NNY 74

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>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 361

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 16  ASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEA 123
           ASP+ PA   PA +  +PA + T A A  P P   A
Sbjct: 2   ASPAVPANVPPATAAAAPAPVVTAAPASAPTPSTPA 37

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>IF2_PELLD (Q3B1Z8) Translation initiation factor IF-2|
          Length = 915

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 19  SPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 144
           SP+PP  + P R+   PA +   AA + P P    T  P  E
Sbjct: 101 SPAPPVHEPPVRAAAQPAPVPV-AAGEAPSPLAPETPAPATE 141



 Score = 29.3 bits (64), Expect = 8.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 7   LSPASPSPPAKDTPARSPRS-PAAMSTDAAADIPVPQVEATADPVVE 144
           L+P +P+P  +  PA +P   PAA     A   P+P  E   +PV E
Sbjct: 131 LAPETPAPATESAPAVAPAGVPAAEPVSEALSAPLP--EPVPEPVPE 175

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>MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupled receptor 50)|
           (H9)
          Length = 613

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 7   LSPASPSPPAKDTPARSPRSPAA--MSTDAAADIPVPQVEATA 129
           +S  S  P +  +PA  P  PAA  + +D  AD+P P V  T+
Sbjct: 550 VSDDSDLPESASSPAAGPTKPAASQLESDTIADLPDPTVVTTS 592

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>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)|
          Length = 926

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 7   LSPASPSPPAKDTPARSPRSP-AAMSTDAAADIPVPQVEATA 129
           +SPA+P  PA   P  +P SP AA+   AAA +    V  TA
Sbjct: 746 ISPAAPVAPAAVVPPAAPVSPAAAVQIPAAASLTPATVSPTA 787

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>MPA5B_LOLPR (Q40237) Major pollen allergen Lol p 5b precursor (Lol p Vb)|
          Length = 339

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATAD 132
           +PA+P+ PA    A +P +PA  +T AA    VP  +AT +
Sbjct: 31  APATPATPAAPATAATPATPATPATPAA----VPSGKATTE 67

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>CDT1_MOUSE (Q8R4E9) DNA replication factor Cdt1 (Double parked homolog) (DUP)|
           (Retroviral insertion site 2 protein)
          Length = 557

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPAAMS 81
           SPA PSPPA  +P   P SP   S
Sbjct: 84  SPAEPSPPADPSPPADPGSPVCPS 107

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>ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)|
           (Unc-51-like kinase 1)
          Length = 1050

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 19  SPSPPAKDTPARSPRSPAAMSTDAAADIPVP 111
           SPSPP   +P+ S R+    S+   A +P+P
Sbjct: 403 SPSPPCSSSPSPSGRAGPFSSSRCGASVPIP 433

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>PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)|
          Length = 2135

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +1

Query: 19  SPSPPAKDTPARS-PRSPAAMSTDAAADIPV-PQVEATA 129
           SP PPA+  P+ S P +P A++T A   +PV P   +TA
Sbjct: 681 SPDPPARGGPSPSPPTAPKALATPAPDTLPVEPGAPSTA 719

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>H1X_CAEEL (Q18336) Histone H1.X (Histone H1-like protein 1)|
          Length = 232

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = +1

Query: 274 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKI---MLTQIKKLVAAGKLT 444
           Y +M+  AI A+    GSS  AI K+I   +  H+  N  K+   + + +KK V +G + 
Sbjct: 40  YMDMIKGAIQAIDNGTGSSKAAILKYIAQNY--HVGENLPKVNNHLRSVLKKAVDSGDIE 97

Query: 445 KVK 453
           + +
Sbjct: 98  QTR 100

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>TR10C_HUMAN (O14798) Tumor necrosis factor receptor superfamily member 10C|
           precursor (Decoy receptor 1) (DcR1) (Decoy TRAIL
           receptor without death domain) (TNF-related
           apoptosis-inducing ligand receptor 3) (TRAIL receptor 3)
           (TRAIL-R3) (Trail receptor wi
          Length = 259

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +1

Query: 10  SPASPSPPAKDTPARSPRSPA-----AMSTDAAADIPVPQVEATADP 135
           SP +P+P A++T   SP +PA      M+T      P  +   T  P
Sbjct: 186 SPGTPAPAAEETMTTSPGTPAPAAEETMTTSPGTPAPAAEETMTTSP 232

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>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum|
           protein MSE55)
          Length = 391

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 25  SPPAKDTPARSPRSPAAMSTDAAADIPVPQVEAT 126
           +PPA   PA +P +PAA  T  AA+ P P   +T
Sbjct: 251 NPPA---PAANPSAPAATPTGPAANPPAPAASST 281

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>H103_CHICK (P08285) Histone H1.03|
          Length = 223

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = +1

Query: 31  PAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 135
           P K TPA  P+ PAA    AAA  P   V     P
Sbjct: 122 PKKKTPAAKPKKPAAKKPAAAAKKPKKAVAVKKSP 156


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.125    0.339 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,507,841
Number of Sequences: 219361
Number of extensions: 478398
Number of successful extensions: 3697
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 2931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3611
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result