ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart36a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106084.1| Zea mays PCO072275 mRNA sequence 60 8e-06
2dbj|AK073591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
3ref|NM_190067.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
5dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
6dbj|AK111477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
7dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
8ref|NM_190071.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
9ref|XM_520144.1| PREDICTED: Pan troglodytes similar to coronin, ... 48 0.029
10ref|NM_052820.2| Homo sapiens coronin, actin binding protein, 2A... 48 0.029
11gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 48 0.029
12emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on ch... 48 0.029
13gb|BC011690.2| Homo sapiens coronin, actin binding protein, 2A, ... 48 0.029
14dbj|AB209809.1| Homo sapiens mRNA for coronin, actin binding pro... 48 0.029
15ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predic... 46 0.11
16dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
17ref|NM_001038220.1| Bos taurus coronin, actin binding protein, 2... 44 0.45
18gb|BC109477.1| Bos taurus cDNA clone MGC:128280 IMAGE:7929071, c... 44 0.45
19gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.8
20gb|AY552779.1| Gracilaria lemaneiformis inter-simple sequence re... 42 1.8
21emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.8
22emb|CR377993.1| Pinus pinaster SSR, clone PPB1A08 42 1.8
23gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.8
24gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 1.8
25dbj|AB033586.1| Potamotrygon motoro ryPTPR2Ac mRNA, partial cds 42 1.8
26ref|NM_197501.1| Oryza sativa (japonica cultivar-group) putative... 40 7.0
27gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 7.0
28ref|NM_190072.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
29gb|AY596292.1| Haloarcula marismortui ATCC 43049 plasmid pNG300,... 40 7.0
30gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genom... 40 7.0
31gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 7.0
32gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 7.0
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.0
34gb|AC121314.7| Mus musculus chromosome 1, clone RP24-429M15, com... 40 7.0
35gb|AC158521.2| Mus musculus BAC clone RP23-404M10 from chromosom... 40 7.0
36gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 7.0
37gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 geno... 40 7.0
38emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.0
39gb|AC090458.5| Homo sapiens chromosome 11, clone CTD-2572N17, co... 40 7.0
40gb|AC111151.3| Homo sapiens chromosome 11, clone CTD-2557D6, com... 40 7.0
41gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequ... 40 7.0
42dbj|AK152490.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 7.0
43dbj|AK154247.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 7.0
44dbj|AK153134.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 7.0
45dbj|AK170184.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 7.0
46gb|AC022001.5| Homo sapiens chromosome 3 clone RP11-169K17 map 3... 40 7.0
47dbj|AK045728.1| Mus musculus adult male corpora quadrigemina cDN... 40 7.0
48dbj|AK030971.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 7.0
49dbj|AK044060.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 7.0
50dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
51dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
52dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
53gb|AC018494.6|AC018494 Homo sapiens chromosome 3 clone RP11-16M3... 40 7.0
54gb|AC018811.4|AC018811 Homo sapiens chromosome 3 clone RP11-13B4... 40 7.0
55ref|XM_575819.1| PREDICTED: Rattus norvegicus coronin, actin bin... 40 7.0
56dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
57emb|AM183546.1| Corallococcus coralloides partial lepA gene for ... 40 7.0
58emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on ch... 40 7.0
59gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 7.0
60gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.0
61gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
62gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
63emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.0
64dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.0 
>gb|AY106084.1| Zea mays PCO072275 mRNA sequence
          Length = 1307

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 240 acgctctccgccaactccaccgacggcagcaacccgctgtccccggtctccttc 293
           ||||| ||||||||| |||||||||||   |||||||||| |||||||||||||
Sbjct: 305 acgctatccgccaacgccaccgacggccagaacccgctgttcccggtctccttc 358



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 325 ccggcgccgtcggcgtggcggggctcgcgcgctcc 359
           |||||||||||||||| ||||||||||||| ||||
Sbjct: 405 ccggcgccgtcggcgtcgcggggctcgcgccctcc 439



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 412 tcgcgctgtgcctcccgagcgacggcagg 440
           ||||||||||||| || ||||||||||||
Sbjct: 501 tcgcgctgtgcctgcccagcgacggcagg 529
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>dbj|AK073591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M04, full
           insert sequence
          Length = 1520

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 465 ggcgcggccatcttcggcggcggaccgttct 495
           ||||||||||||||||||||||| |||||||
Sbjct: 654 ggcgcggccatcttcggcggcggcccgttct 684
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>ref|NM_190067.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1305

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 465 ggcgcggccatcttcggcggcggaccgttc 494
           ||||||||||||||||||||||| ||||||
Sbjct: 634 ggcgcggccatcttcggcggcgggccgttc 663
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 465      ggcgcggccatcttcggcggcggaccgttc 494
                ||||||||||||||||||||||| ||||||
Sbjct: 41119550 ggcgcggccatcttcggcggcgggccgttc 41119521



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 325      ccggcgccgtcggcgtggcggggctcgcgcgctccag 361
                |||||||||||||||| || |||||||||||| ||||
Sbjct: 41132483 ccggcgccgtcggcgtcgccgggctcgcgcgcaccag 41132447



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 256      ccaccgacggcagcaacccgctgtccccggtctccttcgccgccaccgccacctgcgcg 314
                ||||| |||||||||||||||| | ||||||| ||||| | |||  |||| ||||||||
Sbjct: 41126918 ccaccaacggcagcaacccgctctacccggtcaccttcccggccgtcgcctcctgcgcg 41126860



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 464      gggcgcggccatcttcggcggcgg 487
                ||||| ||||||||||||||||||
Sbjct: 41135134 gggcgtggccatcttcggcggcgg 41135111



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                            
Query: 256      ccaccgacggcagcaacccgctgtccccggtctccttcgccgcc 299
                ||||||||||||  |||||||| | |||||| || |||||||||
Sbjct: 41132570 ccaccgacggcaagaacccgctctacccggtgtcgttcgccgcc 41132527



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 465      ggcgcggccatcttcggcggcggaccgttcttcctc 500
                |||| ||| |||||||||||||| ||| ||||||||
Sbjct: 41132361 ggcgtggcgatcttcggcggcggcccgctcttcctc 41132326
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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 465   ggcgcggccatcttcggcggcggaccgttc 494
             ||||||||||||||||||||||| ||||||
Sbjct: 16605 ggcgcggccatcttcggcggcgggccgttc 16576



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 325   ccggcgccgtcggcgtggcggggctcgcgcgctccag 361
             |||||||||||||||| || |||||||||||| ||||
Sbjct: 29538 ccggcgccgtcggcgtcgccgggctcgcgcgcaccag 29502



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 256   ccaccgacggcagcaacccgctgtccccggtctccttcgccgccaccgccacctgcgcg 314
             ||||| |||||||||||||||| | ||||||| ||||| | |||  |||| ||||||||
Sbjct: 23973 ccaccaacggcagcaacccgctctacccggtcaccttcccggccgtcgcctcctgcgcg 23915



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 464   gggcgcggccatcttcggcggcgg 487
             ||||| ||||||||||||||||||
Sbjct: 32189 gggcgtggccatcttcggcggcgg 32166



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 256   ccaccgacggcagcaacccgctgtccccggtctccttcgccgcc 299
             ||||||||||||  |||||||| | |||||| || |||||||||
Sbjct: 29625 ccaccgacggcaagaacccgctctacccggtgtcgttcgccgcc 29582



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 465   ggcgcggccatcttcggcggcggaccgttcttcctc 500
             |||| ||| |||||||||||||| ||| ||||||||
Sbjct: 29416 ggcgtggcgatcttcggcggcggcccgctcttcctc 29381
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>dbj|AK111477.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-A02, full
           insert sequence
          Length = 1075

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 465 ggcgcggccatcttcggcggcggaccgttc 494
           ||||||||||||||||||||||| ||||||
Sbjct: 745 ggcgcggccatcttcggcggcgggccgttc 716
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>dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C06, full
           insert sequence
          Length = 1372

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 465 ggcgcggccatcttcggcggcggaccgttc 494
           ||||||||||||||||||||||| ||||||
Sbjct: 657 ggcgcggccatcttcggcggcgggccgttc 686
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>ref|NM_190071.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1275

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 325 ccggcgccgtcggcgtggcggggctcgcgcgctccag 361
           |||||||||||||||| || |||||||||||| ||||
Sbjct: 506 ccggcgccgtcggcgtcgccgggctcgcgcgcaccag 542



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 465 ggcgcggccatcttcggcggcggaccgttcttcctc 500
           |||| ||| |||||||||||||| ||| ||||||||
Sbjct: 628 ggcgtggcgatcttcggcggcggcccgctcttcctc 663



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 256 ccaccgacggcagcaacccgctgtccccggtctccttcgccgcc 299
           ||||||||||||  |||||||| | |||||| || |||||||||
Sbjct: 419 ccaccgacggcaagaacccgctctacccggtgtcgttcgccgcc 462
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>ref|XM_520144.1| PREDICTED: Pan troglodytes similar to coronin, actin binding
           protein, 2A; coronin, actin-binding protein, 2A; coronin
           2A; coronin-like protein B; WD protein IR10; WD-repeat
           protein 2 (LOC464607), mRNA
          Length = 1501

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||||||||||||||||||||
Sbjct: 25  cgccgccaccgccacctgcgcggc 48
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>ref|NM_052820.2| Homo sapiens coronin, actin binding protein, 2A (CORO2A),
           transcript variant 2, mRNA
          Length = 2265

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||||||||||||||||||||
Sbjct: 49  cgccgccaccgccacctgcgcggc 72
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 340     tggcggggctcgcgcgctccagcg 363
               ||||||||||||||||||||||||
Sbjct: 2800071 tggcggggctcgcgcgctccagcg 2800094
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>emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on chromosome 9p23-24.1
              Contains a novel gene encoding a protein similar to
              bacterial N-acetylneuraminic acid condensing enzyme (NEUB)
              and 3' end of the TBCID2 gene, a TRIM14 gene encoding
              tripartite motif-containing 14 (KIAA0129), the CORO2A gene
              encoding Coronin 2A (actin-binding protein), TBC1D2 gene
              encoding TBC1 domain family, member 2 (PARIS1,
              PARIS-1,DKFZP761D1823, DKFZp761D1823), and 4 CpG islands,
              complete sequence
          Length = 201300

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 293    cgccgccaccgccacctgcgcggc 316
              ||||||||||||||||||||||||
Sbjct: 171764 cgccgccaccgccacctgcgcggc 171741
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>gb|BC011690.2| Homo sapiens coronin, actin binding protein, 2A, transcript variant
           2, mRNA (cDNA clone MGC:19551 IMAGE:3350035), complete
           cds
          Length = 2265

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||||||||||||||||||||
Sbjct: 49  cgccgccaccgccacctgcgcggc 72
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>dbj|AB209809.1| Homo sapiens mRNA for coronin, actin binding protein, 2A variant
           protein
          Length = 1679

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||||||||||||||||||||
Sbjct: 54  cgccgccaccgccacctgcgcggc 77
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>ref|NM_190069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1269

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 256 ccaccgacggcagcaacccgctgtccccggtctccttcgccgccaccgccacctgcgcg 314
           ||||| |||||||||||||||| | ||||||| ||||| | |||  |||| ||||||||
Sbjct: 425 ccaccaacggcagcaacccgctctacccggtcaccttcccggccgtcgcctcctgcgcg 483
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>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full
           insert sequence
          Length = 1405

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 256 ccaccgacggcagcaacccgctgtccccggtctccttcgccgccaccgccacctgcgcg 314
           ||||| |||||||||||||||| | ||||||| ||||| | |||  |||| ||||||||
Sbjct: 346 ccaccaacggcagcaacccgctctacccggtcaccttcccggccgtcgcctcctgcgcg 404
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>ref|NM_001038220.1| Bos taurus coronin, actin binding protein, 2A (CORO2A), mRNA
          Length = 4559

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 295 ccgccaccgccacctgcgcggc 316
           ||||||||||||||||||||||
Sbjct: 57  ccgccaccgccacctgcgcggc 78
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>gb|BC109477.1| Bos taurus cDNA clone MGC:128280 IMAGE:7929071, complete cds
          Length = 4559

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 295 ccgccaccgccacctgcgcggc 316
           ||||||||||||||||||||||
Sbjct: 57  ccgccaccgccacctgcgcggc 78
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 328     gcgccgtcggcgtggcggggctcgc 352
               |||||||| ||||||||||||||||
Sbjct: 1933796 gcgccgtcagcgtggcggggctcgc 1933820
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>gb|AY552779.1| Gracilaria lemaneiformis inter-simple sequence repeat marker sequence
          Length = 2539

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 241  cgctctccgccaactccaccg 261
            |||||||||||||||||||||
Sbjct: 1083 cgctctccgccaactccaccg 1063
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>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 290   cttcgccgccaccgccacctgcgcg 314
             |||||||||||||||||||| ||||
Sbjct: 52207 cttcgccgccaccgccaccttcgcg 52231
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>emb|CR377993.1| Pinus pinaster SSR, clone PPB1A08
          Length = 228

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 287 ctccttcgccgccaccgccacctgc 311
           |||||||||||||||| ||||||||
Sbjct: 116 ctccttcgccgccacctccacctgc 92
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 333     gtcggcgtggcggggctcgcg 353
               |||||||||||||||||||||
Sbjct: 3650194 gtcggcgtggcggggctcgcg 3650174
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 293     cgccgccaccgccacctgcgc 313
               |||||||||||||||||||||
Sbjct: 2975367 cgccgccaccgccacctgcgc 2975347
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>dbj|AB033586.1| Potamotrygon motoro ryPTPR2Ac mRNA, partial cds
          Length = 1517

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 389 aacacagaaggtggccaactc 409
           |||||||||||||||||||||
Sbjct: 153 aacacagaaggtggccaactc 133
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>ref|NM_197501.1| Oryza sativa (japonica cultivar-group) putative transposon protein
           (OSJNBb0038A07.22), mRNA
          Length = 2508

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 ccttcgccgccaccgccacc 308
           ||||||||||||||||||||
Sbjct: 149 ccttcgccgccaccgccacc 130
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 312     gcggcggcaccctccggcgc 331
               ||||||||||||||||||||
Sbjct: 2434742 gcggcggcaccctccggcgc 2434761
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>ref|NM_190072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1260

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 464 gggcgcggccatcttcggcggcgg 487
           ||||| ||||||||||||||||||
Sbjct: 630 gggcgtggccatcttcggcggcgg 653
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>gb|AY596292.1| Haloarcula marismortui ATCC 43049 plasmid pNG300, complete sequence
          Length = 39521

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 464   gggcgcggccatcttcggcggcgg 487
             ||||| ||||||||||||||||||
Sbjct: 30325 gggcggggccatcttcggcggcgg 30348
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>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete
              sequence
          Length = 145714

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 293    cgccgccaccgccacctgc-gcggcggc 319
              ||||||||||||||||||| ||||||||
Sbjct: 108108 cgccgccaccgccacctgctgcggcggc 108135
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 196     cgccggccatcacgacgccgtgca 219
               ||||| ||||||||||||||||||
Sbjct: 1298997 cgccgcccatcacgacgccgtgca 1299020
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 196     cgccggccatcacgacgccgtgca 219
               ||||| ||||||||||||||||||
Sbjct: 2159893 cgccgcccatcacgacgccgtgca 2159870
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                            
Query: 293      cgccgccaccgccacctgc-gcggcggc 319
                ||||||||||||||||||| ||||||||
Sbjct: 16476225 cgccgccaccgccacctgctgcggcggc 16476198
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>gb|AC121314.7| Mus musculus chromosome 1, clone RP24-429M15, complete sequence
          Length = 175976

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    ctctggtgcttctcctgctc 71
             ||||||||||||||||||||
Sbjct: 95683 ctctggtgcttctcctgctc 95702
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>gb|AC158521.2| Mus musculus BAC clone RP23-404M10 from chromosome 14, complete sequence
          Length = 205501

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      ttccaacacagagacacaag 26
              ||||||||||||||||||||
Sbjct: 148711 ttccaacacagagacacaag 148730
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     ccaccgccacctgcgcggcg 317
               ||||||||||||||||||||
Sbjct: 4387612 ccaccgccacctgcgcggcg 4387593
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>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete
             sequence
          Length = 132900

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   ccttcgccgccaccgccacc 308
             ||||||||||||||||||||
Sbjct: 46080 ccttcgccgccaccgccacc 46099
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 196     cgccggccatcacgacgccgtgca 219
               ||||| ||||||||||||||||||
Sbjct: 2214798 cgccgcccatcacgacgccgtgca 2214821
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>gb|AC090458.5| Homo sapiens chromosome 11, clone CTD-2572N17, complete sequence
          Length = 142233

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    gtggctaaaacacagaaggt 400
              ||||||||||||||||||||
Sbjct: 120576 gtggctaaaacacagaaggt 120557
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>gb|AC111151.3| Homo sapiens chromosome 11, clone CTD-2557D6, complete sequence
          Length = 131271

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   gtggctaaaacacagaaggt 400
             ||||||||||||||||||||
Sbjct: 63496 gtggctaaaacacagaaggt 63515
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>gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequence
          Length = 184338

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    cgcgctccagcgcctcgttc 371
              ||||||||||||||||||||
Sbjct: 177620 cgcgctccagcgcctcgttc 177639
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>dbj|AK152490.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830076E18 product:coronin,
           actin binding protein 2A, full insert sequence
          Length = 3695

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||| ||||||||||||||||
Sbjct: 69  cgccgccgccgccacctgcgcggc 92
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>dbj|AK154247.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630011O17
           product:coronin, actin binding protein 2A, full insert
           sequence
          Length = 1832

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||| ||||||||||||||||
Sbjct: 37  cgccgccgccgccacctgcgcggc 60
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>dbj|AK153134.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830124C10 product:coronin,
           actin binding protein 2A, full insert sequence
          Length = 3695

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||| ||||||||||||||||
Sbjct: 69  cgccgccgccgccacctgcgcggc 92
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>dbj|AK170184.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630025I05
           product:coronin, actin binding protein 2A, full insert
           sequence
          Length = 3635

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||| ||||||||||||||||
Sbjct: 38  cgccgccgccgccacctgcgcggc 61
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>gb|AC022001.5| Homo sapiens chromosome 3 clone RP11-169K17 map 3p, complete sequence
          Length = 164607

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     ctctggtgcttctcctgctc 71
              ||||||||||||||||||||
Sbjct: 105199 ctctggtgcttctcctgctc 105218
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>dbj|AK045728.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230308E04
           product:Mus musculus endogenous mouse mammary tumor
           virus like fragment, full insert sequence
          Length = 4631

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||| ||||||||||||||||
Sbjct: 21  cgccgccgccgccacctgcgcggc 44
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>dbj|AK030971.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830472M12 product:CORONIN, ACTIN-BINDING
           PROTEIN, 2A (UNKNOWN) (PROTEIN FOR MGC:19551) homolog
           [Homo sapiens], full insert sequence
          Length = 3640

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||| ||||||||||||||||
Sbjct: 36  cgccgccgccgccacctgcgcggc 59
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>dbj|AK044060.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830085G19 product:CORONIN,
           ACTIN-BINDING PROTEIN, 2A (UNKNOWN) (PROTEIN FOR
           MGC:19551) [Homo sapiens], full insert sequence
          Length = 1389

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||| ||||||||||||||||
Sbjct: 42  cgccgccgccgccacctgcgcggc 65
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 286      tctccttcgccgccaccgcc 305
                ||||||||||||||||||||
Sbjct: 17927332 tctccttcgccgccaccgcc 17927351
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 289      ccttcgccgccaccgccacc 308
                ||||||||||||||||||||
Sbjct: 20120411 ccttcgccgccaccgccacc 20120392
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                            
Query: 293      cgccgccaccgccacctgc-gcggcggc 319
                ||||||||||||||||||| ||||||||
Sbjct: 16469858 cgccgccaccgccacctgctgcggcggc 16469831
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>gb|AC018494.6|AC018494 Homo sapiens chromosome 3 clone RP11-16M3 map 3p, complete sequence
          Length = 174612

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     ctctggtgcttctcctgctc 71
              ||||||||||||||||||||
Sbjct: 127928 ctctggtgcttctcctgctc 127909
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>gb|AC018811.4|AC018811 Homo sapiens chromosome 3 clone RP11-13B4 map 3p, complete sequence
          Length = 177834

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    ctctggtgcttctcctgctc 71
             ||||||||||||||||||||
Sbjct: 86852 ctctggtgcttctcctgctc 86871
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>ref|XM_575819.1| PREDICTED: Rattus norvegicus coronin, actin binding protein 2A
           (predicted) (Coro2a_predicted), mRNA
          Length = 3576

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 cgccgccaccgccacctgcgcggc 316
           ||||||| ||||||||||||||||
Sbjct: 80  cgccgccgccgccacctgcgcggc 103
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>dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B07, full
           insert sequence
          Length = 1404

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 464 gggcgcggccatcttcggcggcgg 487
           ||||| ||||||||||||||||||
Sbjct: 642 gggcgtggccatcttcggcggcgg 665
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>emb|AM183546.1| Corallococcus coralloides partial lepA gene for GTP-binding protein
           lepA, strain DSM 51620
          Length = 915

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 gagcggcgcgtccactgcgc 144
           ||||||||||||||||||||
Sbjct: 489 gagcggcgcgtccactgcgc 470
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>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete
              sequence
          Length = 227816

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 293    cgccgccaccgccacctgcgcggc 316
              ||||||| ||||||||||||||||
Sbjct: 213044 cgccgccgccgccacctgcgcggc 213021
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 252     aactccaccgacggcagcaa 271
               ||||||||||||||||||||
Sbjct: 1329087 aactccaccgacggcagcaa 1329068
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 429     agcgacggcaggaccgggttcacc 452
               ||||||||||||| ||||||||||
Sbjct: 3901094 agcgacggcaggatcgggttcacc 3901117
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 289      ccttcgccgccaccgccacc 308
                ||||||||||||||||||||
Sbjct: 20131687 ccttcgccgccaccgccacc 20131668
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 286      tctccttcgccgccaccgcc 305
                ||||||||||||||||||||
Sbjct: 17853651 tctccttcgccgccaccgcc 17853670
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>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 147543

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   tctccttcgccgccaccgcc 305
             ||||||||||||||||||||
Sbjct: 71224 tctccttcgccgccaccgcc 71205
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 289     ccttcgccgccaccgccacc 308
               ||||||||||||||||||||
Sbjct: 2360264 ccttcgccgccaccgccacc 2360283


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,278,835
Number of Sequences: 3902068
Number of extensions: 3278835
Number of successful extensions: 83136
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 80721
Number of HSP's gapped (non-prelim): 2418
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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