ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart35a09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK060116.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E08, full insert sequence Length = 1111 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 460 ctcggctgcctggacgccttggaggactccttgcccatcaagaacgggctgtcgagcttc 519 ||||||||| |||||||||||||||| ||||| |||||||||| ||||| || | |||| Sbjct: 454 ctcggctgcttggacgccttggaggaatccttacccatcaagagggggctctccaacttc 513 Query: 520 tacgccggcaagtccaagtccttca 544 |||||||||||||||||||| |||| Sbjct: 514 tacgccggcaagtccaagtcgttca 538 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 329 tgctgaccgagagctcctccatcggcgcgccgtcgccgtcgagctcctccatcggcgagg 388 ||||||| |||||||| || |||||||||||||||||| ||||||| || ||||| ||| Sbjct: 317 tgctgacggagagctcgtcgatcggcgcgccgtcgccggcgagctcgtcgatcggggaga 376 Query: 389 actcc 393 ||||| Sbjct: 377 actcc 381 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 427 gaggtggagagcaagctcaaggaggag 453 |||||||||||||||||||||| |||| Sbjct: 412 gaggtggagagcaagctcaaggcggag 438 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 catgtcgacggcggtggcgga 206 ||||||||||||||||||||| Sbjct: 165 catgtcgacggcggtggcgga 185
>gb|AY108454.1| Zea mays PCO149386 mRNA sequence Length = 1173 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 427 gaggtggagagcaagctcaaggaggagcccgggctcggctgcctggacgccttggaggac 486 ||||| ||||||||||||||||||| | |||||||||| ||||||| | |||||| Sbjct: 431 gaggtcgagagcaagctcaaggagggtgatgtgctcggctgcttggacgcgctcgaggac 490 Query: 487 tccttgcccatcaagaacgggctgtcgagcttctacgccggcaagtccaagtccttca 544 |||||||| |||||||| || || |||||||||||| |||||||||| ||||| |||| Sbjct: 491 tccttgccgatcaagaagggcctctcgagcttctactccggcaagtctaagtcgttca 548 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 gacatgtcgacggcggtggcggagg 208 |||||||||||||||||||| |||| Sbjct: 173 gacatgtcgacggcggtggcagagg 197
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 329 tgctgaccgagagctcctccatcggcgcgccgtcgccgtcgagctcctccatcggcgagg 388 ||||||| |||||||| || |||||||||||||||||| ||||||| || ||||| ||| Sbjct: 58599 tgctgacggagagctcgtcgatcggcgcgccgtcgccggcgagctcgtcgatcggggaga 58540 Query: 389 actcc 393 ||||| Sbjct: 58539 actcc 58535 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 460 ctcggctgcctggacgccttggaggactccttgcccatcaag 501 ||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 58462 ctcggctgcttggacgccttggaggaatccttacccatcaag 58421 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 516 cttctacgccggcaagtccaagtccttca 544 |||||||||||||||||||||||| |||| Sbjct: 57636 cttctacgccggcaagtccaagtcgttca 57608 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 427 gaggtggagagcaagctcaaggaggag 453 |||||||||||||||||||||| |||| Sbjct: 58504 gaggtggagagcaagctcaaggcggag 58478 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 catgtcgacggcggtggcgga 206 ||||||||||||||||||||| Sbjct: 58751 catgtcgacggcggtggcgga 58731
>gb|AY023084.1| Oryza sativa microsatellite MRG5409 containing (GAG)X8, closest to marker RM108, genomic sequence Length = 224 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 329 tgctgaccgagagctcctccatcggcgcgccgtcgccgtcgagctcctccatcggcgagg 388 ||||||| |||||||| || |||||||||||||||||| ||||||| || ||||| ||| Sbjct: 126 tgctgacggagagctcgtcgatcggcgcgccgtcgccggcgagctcgtcgatcggggaga 185 Query: 389 actcc 393 ||||| Sbjct: 186 actcc 190
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 329 tgctgaccgagagctcctccatcggcgcgccgtcgccgtcgagctcctccatcggcgagg 388 ||||||| |||||||| || |||||||||||||||||| ||||||| || ||||| ||| Sbjct: 19013335 tgctgacggagagctcgtcgatcggcgcgccgtcgccggcgagctcgtcgatcggggaga 19013276 Query: 389 actcc 393 ||||| Sbjct: 19013275 actcc 19013271 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 460 ctcggctgcctggacgccttggaggactccttgcccatcaag 501 ||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 19013198 ctcggctgcttggacgccttggaggaatccttacccatcaag 19013157 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 516 cttctacgccggcaagtccaagtccttca 544 |||||||||||||||||||||||| |||| Sbjct: 19012372 cttctacgccggcaagtccaagtcgttca 19012344 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 427 gaggtggagagcaagctcaaggaggag 453 |||||||||||||||||||||| |||| Sbjct: 19013240 gaggtggagagcaagctcaaggcggag 19013214 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 catgtcgacggcggtggcgga 206 ||||||||||||||||||||| Sbjct: 19013487 catgtcgacggcggtggcgga 19013467
>ref|NM_189018.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1159 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 479 tggaggactccttgcccatcaagaacgggctgtcgagcttctacgccggcaagtccaagt 538 |||||||| || | |||||||||| || || || | ||||||||||||||||||||||| Sbjct: 565 tggaggacgcccttcccatcaagaggggactctccaacttctacgccggcaagtccaagt 624 Query: 539 ccttca 544 | |||| Sbjct: 625 cgttca 630
>dbj|AK072516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131A13, full insert sequence Length = 1158 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 479 tggaggactccttgcccatcaagaacgggctgtcgagcttctacgccggcaagtccaagt 538 |||||||| || | |||||||||| || || || | ||||||||||||||||||||||| Sbjct: 565 tggaggacgcccttcccatcaagaggggactctccaacttctacgccggcaagtccaagt 624 Query: 539 ccttca 544 | |||| Sbjct: 625 cgttca 630
>gb|AY021693.1| Oryza sativa microsatellite MRG4018 containing (TA)X33, closest to marker RM108, genomic sequence Length = 266 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 516 cttctacgccggcaagtccaagtccttca 544 |||||||||||||||||||||||| |||| Sbjct: 221 cttctacgccggcaagtccaagtcgttca 249
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 516 cttctacgccggcaagtccaagtccttca 544 |||||||||||||||||||||||| |||| Sbjct: 25637477 cttctacgccggcaagtccaagtcgttca 25637505 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 23516376 cgccgtcgccgtcgagctcc 23516357 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 12492136 cgccgtcgccgtcgagctcc 12492155 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 11323664 cgccgtcgccgtcgagctcc 11323683 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 8733144 cgccgtcgccgtcgagctcc 8733163 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 8724220 cgccgtcgccgtcgagctcc 8724239 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 7114654 cgccgtcgccgtcgagctcc 7114673
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 516 cttctacgccggcaagtccaagtccttca 544 |||||||||||||||||||||||| |||| Sbjct: 124168 cttctacgccggcaagtccaagtcgttca 124196
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 516 cttctacgccggcaagtccaagtccttca 544 |||||||||||||||||||||||| |||| Sbjct: 15225 cttctacgccggcaagtccaagtcgttca 15253
>ref|XM_823166.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.55.0010) partial mRNA Length = 1713 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 146 gctggcatcatcgtccggatcgtcggtttcgc 177 |||| |||||||||||| |||||||||||||| Sbjct: 1287 gctgccatcatcgtccgaatcgtcggtttcgc 1256
>gb|AC163353.3| Mus musculus BAC clone RP23-55G7 from chromosome 6, complete sequence Length = 264135 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 8 atcttatcccatcacccatttcttcct 34 ||||||||||||||||| ||||||||| Sbjct: 231748 atcttatcccatcacccctttcttcct 231722
>gb|AC127328.6| Mus musculus BAC clone RP23-259B8 from 6, complete sequence Length = 186950 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 8 atcttatcccatcacccatttcttcct 34 ||||||||||||||||| ||||||||| Sbjct: 25146 atcttatcccatcacccctttcttcct 25120
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 496 atcaagaacgggctgtcgagct 517 |||||||||||||||||||||| Sbjct: 808771 atcaagaacgggctgtcgagct 808750
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 gctcctccatcggcgcgccgtcgccg 366 |||||||| ||||||||||||||||| Sbjct: 4997051 gctcctccttcggcgcgccgtcgccg 4997026 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 acgcgctgctcggcaagaag 276 |||||||||||||||||||| Sbjct: 4213157 acgcgctgctcggcaagaag 4213176
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 249 caagggggacgcgctgctcggcaagaagat 278 ||||| |||||||||||||| ||||||||| Sbjct: 87274 caaggaggacgcgctgctcgacaagaagat 87303 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ggacgcgctgctcggcaaga 274 |||||||||||||||||||| Sbjct: 6779226 ggacgcgctgctcggcaaga 6779245
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 gtggagagcaagctcaaggag 450 ||||||||||||||||||||| Sbjct: 68687 gtggagagcaagctcaaggag 68707
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 gtggagagcaagctcaaggag 450 ||||||||||||||||||||| Sbjct: 21819129 gtggagagcaagctcaaggag 21819109 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 2630739 cgccgtcgccgtcgagctcc 2630758
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 gtggagagcaagctcaaggag 450 ||||||||||||||||||||| Sbjct: 21812158 gtggagagcaagctcaaggag 21812138 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 2630849 cgccgtcgccgtcgagctcc 2630868
>gb|AC084655.1|CBRG46I19 Caenorhabditis briggsae cosmid G46I19, complete sequence Length = 41381 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 tggcgatggtgaagacgatga 428 ||||||||||||||||||||| Sbjct: 7771 tggcgatggtgaagacgatga 7791
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 tcgacggcggtggcggaggct 210 ||||||||||||||||||||| Sbjct: 3267127 tcgacggcggtggcggaggct 3267147 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 acgcgctgctcggcaagaag 276 |||||||||||||||||||| Sbjct: 4090645 acgcgctgctcggcaagaag 4090626
>dbj|AK099585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042E18, full insert sequence Length = 956 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 catgtcgacggcggtggcgga 206 ||||||||||||||||||||| Sbjct: 142 catgtcgacggcggtggcgga 162
>dbj|AK063617.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D12, full insert sequence Length = 411 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 catgtcgacggcggtggcgga 206 ||||||||||||||||||||| Sbjct: 123 catgtcgacggcggtggcgga 143
>ref|NM_188626.1| Oryza sativa (japonica cultivar-group), Ozsa8229 predicted mRNA Length = 756 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cgcgccgtcgccgtcgagctcctc 377 ||||||||||||| |||||||||| Sbjct: 55 cgcgccgtcgccggcgagctcctc 78
>ref|XM_480934.1| Oryza sativa (japonica cultivar-group), mRNA Length = 567 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 241 cgccgtcgccgtcgagctcc 222
>ref|XM_480933.1| Oryza sativa (japonica cultivar-group), mRNA Length = 567 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 241 cgccgtcgccgtcgagctcc 222
>ref|XM_480707.1| Oryza sativa (japonica cultivar-group), mRNA Length = 378 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 158 cgccgtcgccgtcgagctcc 177
>ref|NM_183988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 387 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 304 cgccgtcgccgtcgagctcc 285
>ref|NM_196357.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0058B20.7), mRNA Length = 843 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 565 cgccgtcgccgtcgagctcc 546
>ref|NM_196153.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0091J06.22), mRNA Length = 567 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tcggcgcgccgtcgccgtcg 369 |||||||||||||||||||| Sbjct: 480 tcggcgcgccgtcgccgtcg 499
>ref|NM_183897.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 804 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 535 cgccgtcgccgtcgagctcc 516
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 acgcgctgctcggcaagaag 276 |||||||||||||||||||| Sbjct: 1701016 acgcgctgctcggcaagaag 1701035
>ref|NM_193892.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 658 cgccgtcgccgtcgagctcc 639
>ref|NM_133300.2| Rattus norvegicus HLA-B-associated transcript 1A (Bat1a), mRNA Length = 1660 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tgaagacgatgaggtggaga 436 |||||||||||||||||||| Sbjct: 182 tgaagacgatgaggtggaga 201
>ref|XM_478560.1| Oryza sativa (japonica cultivar-group), mRNA Length = 378 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 159 cgccgtcgccgtcgagctcc 178
>ref|XM_472327.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 567 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gtcgacggcggtggcggagg 208 |||||||||||||||||||| Sbjct: 209 gtcgacggcggtggcggagg 190
>gb|AC105320.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1675_H07, complete sequence Length = 135294 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 79073 cgccgtcgccgtcgagctcc 79054
>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04, complete sequence Length = 168424 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 30138 cgccgtcgccgtcgagctcc 30119
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16, complete sequence Length = 164501 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 161451 cgccgtcgccgtcgagctcc 161470
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 97496 cgccgtcgccgtcgagctcc 97477
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tggtgtttgtccttgttctt 99 |||||||||||||||||||| Sbjct: 552902 tggtgtttgtccttgttctt 552883
>gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0034E03 map near 50283S, complete sequence Length = 134074 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 130704 cgccgtcgccgtcgagctcc 130723 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 122003 cgccgtcgccgtcgagctcc 122022
>gb|AC120308.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0070D17 map G44, complete sequence Length = 135627 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 48862 cgccgtcgccgtcgagctcc 48881
>gb|AC146946.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037B06 map near 50283S, complete sequence Length = 149398 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 40032 cgccgtcgccgtcgagctcc 40051 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 31331 cgccgtcgccgtcgagctcc 31350
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0005H02, complete sequence Length = 144882 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 93463 cgccgtcgccgtcgagctcc 93444 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 86889 cgccgtcgccgtcgagctcc 86870
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24, complete sequence Length = 148784 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 47107 cgccgtcgccgtcgagctcc 47088
>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0055E23, complete sequence Length = 156572 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 148871 cgccgtcgccgtcgagctcc 148890
>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06, complete sequence Length = 179695 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 111647 cgccgtcgccgtcgagctcc 111628 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 97577 cgccgtcgccgtcgagctcc 97558
>gb|AC152830.2| Ornithorhynchus anatinus BAC clone OABb-207A1 from chromosome unknown, complete sequence Length = 132350 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acaagttgctgctgagttgg 82 |||||||||||||||||||| Sbjct: 94356 acaagttgctgctgagttgg 94375
>emb|AJ251914.1|SSC251914 Sus scrofa MHC class I SLA genes, haplotype H01, clone BAC 493A6 Length = 158063 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tgaagacgatgaggtggaga 436 |||||||||||||||||||| Sbjct: 38620 tgaagacgatgaggtggaga 38639
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ggcgatggtgaagacgatga 428 |||||||||||||||||||| Sbjct: 1104540 ggcgatggtgaagacgatga 1104521
>ref|XM_568304.1| Cryptococcus neoformans var. neoformans JEC21 DNA unwinding-related protein (CNM01820) partial mRNA Length = 3086 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 tggtgtttgtccttgttctt 99 |||||||||||||||||||| Sbjct: 3039 tggtgtttgtccttgttctt 3058
>ref|XM_662608.1| Cryptosporidium hominis TU502 protease (Chro.60016) partial mRNA Length = 4710 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 tggtggcgatggtgaagacgatga 428 |||||||||||||||||| ||||| Sbjct: 4659 tggtggcgatggtgaagatgatga 4636 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 tggtggcgatggtgaagacgatga 428 ||||||||| |||||||||||||| Sbjct: 4605 tggtggcgacggtgaagacgatga 4582
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 acgcgctgctcggcaagaag 276 |||||||||||||||||||| Sbjct: 3754103 acgcgctgctcggcaagaag 3754084
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 tccatcggcgcgccgtcgccgtcg 369 ||||||| |||||||||||||||| Sbjct: 1700280 tccatcgccgcgccgtcgccgtcg 1700303
>emb|Z34846.1|SSBAT1G S.scrofa BAT1 gene Length = 10674 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tgaagacgatgaggtggaga 436 |||||||||||||||||||| Sbjct: 1146 tgaagacgatgaggtggaga 1165
>emb|X82447.4|OCA82447 Oligotropha carboxidovorans plasmid pHCG3 Length = 133058 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gttggtggcgatggtgaagacgat 426 ||||||||||||||||| |||||| Sbjct: 16851 gttggtggcgatggtgatgacgat 16828
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 acgcgctgctcggcaagaag 276 |||||||||||||||||||| Sbjct: 105448 acgcgctgctcggcaagaag 105467
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 acgcgctgctcggcaagaag 276 |||||||||||||||||||| Sbjct: 732466 acgcgctgctcggcaagaag 732447
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 acgcgctgctcggcaagaag 276 |||||||||||||||||||| Sbjct: 2380664 acgcgctgctcggcaagaag 2380645
>emb|BX883046.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 5/11 Length = 349047 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tgaagacgatgaggtggaga 436 |||||||||||||||||||| Sbjct: 90867 tgaagacgatgaggtggaga 90886
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 ggcggcgctggcatcatcgtccgg 163 ||||||||||||||| |||||||| Sbjct: 10094 ggcggcgctggcatcgtcgtccgg 10117
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 ggcggcgctggcatcatcgtccgg 163 ||||||||||||||| |||||||| Sbjct: 83534 ggcggcgctggcatcgtcgtccgg 83557
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 ggcggcgctggcatcatcgtccgg 163 ||||||||||||||| |||||||| Sbjct: 287649 ggcggcgctggcatcgtcgtccgg 287626
>emb|CR848661.5| Zebrafish DNA sequence from clone CH211-187B9 in linkage group 15, complete sequence Length = 149649 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ctgaccgagagctcctccat 350 |||||||||||||||||||| Sbjct: 97422 ctgaccgagagctcctccat 97441
>emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0093G06, complete sequence Length = 127420 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 100799 cgccgtcgccgtcgagctcc 100818
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 1224 cgccgtcgccgtcgagctcc 1243
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12, complete sequence Length = 128574 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 21830 cgccgtcgccgtcgagctcc 21849
>emb|AJ556548.1|DRE556548 Danio rerio mRNA for TRAF4 protein, splice variant 1 Length = 1913 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ctgaccgagagctcctccat 350 |||||||||||||||||||| Sbjct: 1228 ctgaccgagagctcctccat 1209
>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ gene, spiK gene, spiL gene and spiZ gene Length = 48000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgtcgccgtcgagctcctcc 378 |||||||||||||||||||| Sbjct: 16805 cgtcgccgtcgagctcctcc 16824
>emb|AJ314857.1|RNO314857 Rattus norvegicus Nfkbil1 gene (partial), Atp6G, Bat1, RT1-C/E1, RT1-C/E2, RT1-C/E3, RT1-C/E4, RT1-C/E5, RT1-C/E7 genes and RT1-C/E6, RT1-C/E8, RT1-C/E9 pseudogenes Length = 198911 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tgaagacgatgaggtggaga 436 |||||||||||||||||||| Sbjct: 8683 tgaagacgatgaggtggaga 8702
>gb|BC065969.1| Danio rerio tnf receptor-associated factor 4a, mRNA (cDNA clone MGC:77418 IMAGE:6970326), complete cds Length = 3090 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ctgaccgagagctcctccat 350 |||||||||||||||||||| Sbjct: 1165 ctgaccgagagctcctccat 1146
>emb|BX663526.8| Chicken DNA sequence from clone WAG-93H17, complete sequence Length = 50749 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ggtgtttgtccttgttcttg 100 |||||||||||||||||||| Sbjct: 7088 ggtgtttgtccttgttcttg 7069
>gb|AF387339.1| Rattus norvegicus IkBL, vacuolar ATPase NG38, Bat1, and MHC class I antigen (RT1.46) genes, complete cds Length = 36516 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tgaagacgatgaggtggaga 436 |||||||||||||||||||| Sbjct: 10547 tgaagacgatgaggtggaga 10566
>gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0020E23, complete sequence Length = 151359 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 tccatcggcgcgccgtcgccgtcg 369 ||||||| |||||||||||||||| Sbjct: 97377 tccatcgccgcgccgtcgccgtcg 97400
>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0091J06 from chromosome 10, complete sequence Length = 141911 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tcggcgcgccgtcgccgtcg 369 |||||||||||||||||||| Sbjct: 139674 tcggcgcgccgtcgccgtcg 139693
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tcggcgcgccgtcgccgtcg 369 |||||||||||||||||||| Sbjct: 30596 tcggcgcgccgtcgccgtcg 30615
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 26680 cgccgtcgccgtcgagctcc 26661
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 39355 cgccgtcgccgtcgagctcc 39336
>tpg|BK000364.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M84, complete sequence Length = 19009 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 6639 cgccgtcgccgtcgagctcc 6620
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gtcgacggcggtggcggagg 208 |||||||||||||||||||| Sbjct: 19501534 gtcgacggcggtggcggagg 19501515 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 13780708 cgccgtcgccgtcgagctcc 13780727 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 9689624 cgccgtcgccgtcgagctcc 9689643 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 9301146 cgccgtcgccgtcgagctcc 9301127 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 8916490 cgccgtcgccgtcgagctcc 8916509
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 16769341 cgccgtcgccgtcgagctcc 16769322 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 13121676 cgccgtcgccgtcgagctcc 13121657 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 13113758 cgccgtcgccgtcgagctcc 13113739 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 12794926 cgccgtcgccgtcgagctcc 12794945 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 12639846 cgccgtcgccgtcgagctcc 12639827
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 19518947 cgccgtcgccgtcgagctcc 19518928 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 14704953 cgccgtcgccgtcgagctcc 14704934 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 14696252 cgccgtcgccgtcgagctcc 14696233 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 9781525 cgccgtcgccgtcgagctcc 9781544
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 12894170 cgccgtcgccgtcgagctcc 12894189 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tcggcgcgccgtcgccgtcg 369 |||||||||||||||||||| Sbjct: 11446603 tcggcgcgccgtcgccgtcg 11446622 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 9004352 cgccgtcgccgtcgagctcc 9004333 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 tccatcggcgcgccgtcgccgtcg 369 ||||||| |||||||||||||||| Sbjct: 1700280 tccatcgccgcgccgtcgccgtcg 1700303
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 21136141 cgccgtcgccgtcgagctcc 21136160
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 20208835 cgccgtcgccgtcgagctcc 20208816 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 15375116 cgccgtcgccgtcgagctcc 15375097 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 15284510 cgccgtcgccgtcgagctcc 15284529 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 12028833 cgccgtcgccgtcgagctcc 12028814 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 12014763 cgccgtcgccgtcgagctcc 12014744 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 11423594 cgccgtcgccgtcgagctcc 11423613
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 36881342 cgccgtcgccgtcgagctcc 36881361 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 15683813 cgccgtcgccgtcgagctcc 15683794 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 13734818 cgccgtcgccgtcgagctcc 13734799 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggcggcgctggcatcatcgt 159 |||||||||||||||||||| Sbjct: 13648984 ggcggcgctggcatcatcgt 13649003 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 13082234 cgccgtcgccgtcgagctcc 13082215 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 13051615 cgccgtcgccgtcgagctcc 13051634 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cgcgccgtcgccgtcgagctcctc 377 ||||||||||||| |||||||||| Sbjct: 7301665 cgcgccgtcgccggcgagctcctc 7301688
>emb|BX663529.7| Chicken DNA sequence from clone WAG-19H9, complete sequence Length = 133037 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ggtgtttgtccttgttcttg 100 |||||||||||||||||||| Sbjct: 116087 ggtgtttgtccttgttcttg 116068
>emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gtcgacggcggtggcggagg 208 |||||||||||||||||||| Sbjct: 22181 gtcgacggcggtggcggagg 22162
>ref|NM_001005157.1| Sus scrofa HLA-B associated transcript 1 (BAT1), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tgaagacgatgaggtggaga 436 |||||||||||||||||||| Sbjct: 39 tgaagacgatgaggtggaga 58
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggcggcgctggcatcatcgt 159 |||||||||||||||||||| Sbjct: 202944 ggcggcgctggcatcatcgt 202963
>dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1146B04 Length = 145186 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 73146 cgccgtcgccgtcgagctcc 73127
>gb|AE004946.1| Pseudomonas aeruginosa PAO1, section 507 of 529 of the complete genome Length = 13075 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ccatcggcgcgccgtcgccg 366 |||||||||||||||||||| Sbjct: 12045 ccatcggcgcgccgtcgccg 12026
>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0027A14, from chromosome 10, complete sequence Length = 175667 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 92575 cgccgtcgccgtcgagctcc 92556
>dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1096A10 Length = 150976 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 96920 cgccgtcgccgtcgagctcc 96939
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cgcgccgtcgccgtcgagctcctc 377 ||||||||||||| |||||||||| Sbjct: 103095 cgcgccgtcgccggcgagctcctc 103118
>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0696F12 Length = 165227 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 57502 cgccgtcgccgtcgagctcc 57521
>dbj|AP004696.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0475A09 Length = 143417 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 61269 cgccgtcgccgtcgagctcc 61288
>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0437G01 Length = 147101 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 10893 cgccgtcgccgtcgagctcc 10912 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 1969 cgccgtcgccgtcgagctcc 1988
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 acgcgctgctcggcaagaag 276 |||||||||||||||||||| Sbjct: 5804548 acgcgctgctcggcaagaag 5804529
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 121710 cgccgtcgccgtcgagctcc 121691
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158F07 Length = 139491 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 57955 cgccgtcgccgtcgagctcc 57936 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 27336 cgccgtcgccgtcgagctcc 27355
>dbj|AP003336.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151H08 Length = 123001 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggcggcgctggcatcatcgt 159 |||||||||||||||||||| Sbjct: 54222 ggcggcgctggcatcatcgt 54241
>dbj|AP004320.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1008_F01 Length = 128472 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 121202 cgccgtcgccgtcgagctcc 121183 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 90583 cgccgtcgccgtcgagctcc 90602
>dbj|AP004041.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1115_A07 Length = 165126 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 96165 cgccgtcgccgtcgagctcc 96184
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_E05 Length = 126978 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 107791 cgccgtcgccgtcgagctcc 107772
>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0070J06 Length = 142303 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 76123 cgccgtcgccgtcgagctcc 76142 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 67199 cgccgtcgccgtcgagctcc 67218
>dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0674B07 Length = 192191 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 160140 cgccgtcgccgtcgagctcc 160159
>dbj|AK107750.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H08, full insert sequence Length = 919 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gtcgacggcggtggcggagg 208 |||||||||||||||||||| Sbjct: 255 gtcgacggcggtggcggagg 236
>dbj|AK099190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H12, full insert sequence Length = 1055 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cgcgccgtcgccgtcgagctcctc 377 ||||||||||||| |||||||||| Sbjct: 101 cgcgccgtcgccggcgagctcctc 124
>gb|AC151283.2| Mus musculus BAC clone RP23-463A14 from 17, complete sequence Length = 177340 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gctgagttggtgtttgtcct 92 |||||||||||||||||||| Sbjct: 43955 gctgagttggtgtttgtcct 43936
>dbj|AK069592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019I12, full insert sequence Length = 1059 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cgcgccgtcgccgtcgagctcctc 377 ||||||||||||| |||||||||| Sbjct: 104 cgcgccgtcgccggcgagctcctc 127
>gb|BC080243.1| Rattus norvegicus HLA-B-associated transcript 1A, mRNA (cDNA clone MGC:91440 IMAGE:7100155), complete cds Length = 1660 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tgaagacgatgaggtggaga 436 |||||||||||||||||||| Sbjct: 182 tgaagacgatgaggtggaga 201
>emb|CR392353.6| Zebrafish DNA sequence from clone CH211-9D19 in linkage group 11, complete sequence Length = 183599 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ctgaccgagagctcctccat 350 |||||||||||||||||||| Sbjct: 111582 ctgaccgagagctcctccat 111563
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcgcgccgtcgccgtcgagc 372 |||||||||||||||||||| Sbjct: 1861387 gcgcgccgtcgccgtcgagc 1861406
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 acgcgctgctcggcaagaag 276 |||||||||||||||||||| Sbjct: 3224553 acgcgctgctcggcaagaag 3224534
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcgcgccgtcgccgtcgagc 372 |||||||||||||||||||| Sbjct: 144988 gcgcgccgtcgccgtcgagc 145007
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 12901510 cgccgtcgccgtcgagctcc 12901529 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tcggcgcgccgtcgccgtcg 369 |||||||||||||||||||| Sbjct: 11453043 tcggcgcgccgtcgccgtcg 11453062 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 9009491 cgccgtcgccgtcgagctcc 9009472 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 tccatcggcgcgccgtcgccgtcg 369 ||||||| |||||||||||||||| Sbjct: 1700231 tccatcgccgcgccgtcgccgtcg 1700254
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 19678360 cgccgtcgccgtcgagctcc 19678341 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 19671786 cgccgtcgccgtcgagctcc 19671767 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 14785494 cgccgtcgccgtcgagctcc 14785475 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 14776793 cgccgtcgccgtcgagctcc 14776774 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 9853222 cgccgtcgccgtcgagctcc 9853241
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 16722574 cgccgtcgccgtcgagctcc 16722555 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 13075950 cgccgtcgccgtcgagctcc 13075931 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 13068032 cgccgtcgccgtcgagctcc 13068013 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 12749200 cgccgtcgccgtcgagctcc 12749219 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 12594120 cgccgtcgccgtcgagctcc 12594101
>emb|AL935068.5|CNS08CCK Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0088J13 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116974 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 16060 cgccgtcgccgtcgagctcc 16079
>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09, complete sequence Length = 187359 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 175316 cgccgtcgccgtcgagctcc 175335
>emb|AL844879.5|CNS08CB2 Oryza sativa chromosome 12, . BAC OSJNBa0036H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156724 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 124301 cgccgtcgccgtcgagctcc 124282
>emb|AL844499.5|CNS08CAW Oryza sativa chromosome 12, . BAC OSJNBb0092K12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129540 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 85034 cgccgtcgccgtcgagctcc 85015
>emb|AL928777.4|CNS08CC7 Oryza sativa chromosome 12, . BAC OSJNBa0017G24 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150201 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 124567 cgccgtcgccgtcgagctcc 124586
>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178827 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 110879 cgccgtcgccgtcgagctcc 110860 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgccgtcgccgtcgagctcc 375 |||||||||||||||||||| Sbjct: 102961 cgccgtcgccgtcgagctcc 102942
>emb|CR381686.16| Zebrafish DNA sequence from clone CH211-179L5 in linkage group 24, complete sequence Length = 137127 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tggtgtttgtccttgttctt 99 |||||||||||||||||||| Sbjct: 11567 tggtgtttgtccttgttctt 11548
>gb|L48927.1|RCAMCPAB Rhodobacter capsulatus methyl-accepting chemoreceptors (mcpA and mcpB) genes, complete cds Length = 5186 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 179 gcgcagacatgtcgacggcggtggcgga 206 |||| ||| ||||||||||||||||||| Sbjct: 4256 gcgccgacgtgtcgacggcggtggcgga 4229
>ref|NM_205762.1| Danio rerio tnf receptor-associated factor 4a (traf4a), mRNA Length = 3090 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ctgaccgagagctcctccat 350 |||||||||||||||||||| Sbjct: 1165 ctgaccgagagctcctccat 1146
>gb|M75168.1|RATP49A Rattus norvegicus liver nuclear protein p47 mRNA, Length = 1643 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tgaagacgatgaggtggaga 436 |||||||||||||||||||| Sbjct: 138 tgaagacgatgaggtggaga 157 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,873,797 Number of Sequences: 3902068 Number of extensions: 3873797 Number of successful extensions: 96711 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91559 Number of HSP's gapped (non-prelim): 5152 length of query: 544 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 521 effective length of database: 17,143,297,704 effective search space: 8931658103784 effective search space used: 8931658103784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
