ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart34h01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF097657.1|AF097657 Triticum aestivum heat shock protein HSP26 (hsp26.6) mRNA, hsp26.6-g allele, nuclear gene encoding chloroplast protein, complete cds Length = 1080 Score = 539 bits (272), Expect = e-150 Identities = 345/368 (93%), Gaps = 6/368 (1%) Strand = Plus / Plus Query: 123 ctatctggtgcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctccccg 182 ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 100 ctatctggtgcaatggctgacgcgaacgcccccttcgctctcgtcagccgcctctccccg 159 Query: 183 gccgcgcgcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccgg- 241 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 160 gccgcgcgcctgcccatccgtgcctggagggccgcgaggccagcgccgctctcgaccggc 219 Query: 242 --gagaacccgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtc 299 ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||| Sbjct: 220 gggagaacccgcccgctctccgtggcctccgcggcgcaggagaacagggacaactccgtc 279 Query: 300 gacgtccaagtcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgc 359 ||||||||||||||||||| || ||||||||| |||||||||||||| || ||||||||| Sbjct: 280 gacgtccaagtcagccaggcccagaacgccggaaaccagcagggcaacgcagtccagcgc 339 Query: 360 cgccctcgtcgcgctgctggatttgacatctccccgttcgggctggtggacccgatgtcg 419 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 340 cgccctcgtcgc---gctggatttgacatctccccgttcgggctagtggacccgatgtcg 396 Query: 420 ccgatgagaacgatgaagcagatgctggacacgatggaccggctgttcgacgacgccgtg 479 |||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 397 ccgatgaggacgatgcggcagatgcttgacacgatggaccggctgttcgacgacgccgtg 456 Query: 480 gggttccc 487 |||||||| Sbjct: 457 gggttccc 464 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 523 agatgccgcggatgccttgggacatcat 550 |||||||||||||||| ||||||||||| Sbjct: 497 agatgccgcggatgccgtgggacatcat 524
>emb|X58280.1|TAHSP26 T.aestivum mRNA for heat shock protein 26.6 Length = 940 Score = 533 bits (269), Expect = e-148 Identities = 339/361 (93%), Gaps = 6/361 (1%) Strand = Plus / Plus Query: 130 gtgcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctccccggccgcgc 189 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 86 gtgcaatggctgcagcgaacgctcccttcgctctcgtcagccgcctctccccggccgcgc 145 Query: 190 gcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccgg---gagaa 246 |||||||||||||||||||||| ||||||||||| |||||||||| |||||| ||||| Sbjct: 146 gcctgcccatccgtgcctggagagccgcgaggccggcgccgctctcgaccggcgggagaa 205 Query: 247 cccgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacgtcc 306 |||||||||||||||||||||| |||||||||||||| | ||||| |||||||||||||| Sbjct: 206 cccgcccgctctccgtggcctccgcggcgcaggagaatagggacaactccgtcgacgtcc 265 Query: 307 aagtcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgccgccctc 366 |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 266 aagtcagccaggcccagaacgccggcaaccagcagggcaatgcagtccagcgccgccctc 325 Query: 367 gtcgcgctgctggatttgacatctccccgttcgggctggtggacccgatgtcgccgatga 426 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 326 gtcgc---gctggatttgacatctccccgttcgggctagtggacccgatgtcgccgatga 382 Query: 427 gaacgatgaagcagatgctggacacgatggaccggctgttcgacgacgccgtggggttcc 486 | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 ggacgatgcggcagatgctggacacgatggaccggctgttcgacgacgccgtggggttcc 442 Query: 487 c 487 | Sbjct: 443 c 443
>gb|AF097658.1|AF097658 Triticum aestivum heat shock protein HSP26 (hsp26.6) mRNA, hsp26.6-i allele, nuclear gene encoding chloroplast protein, complete cds Length = 1019 Score = 533 bits (269), Expect = e-148 Identities = 339/361 (93%), Gaps = 6/361 (1%) Strand = Plus / Plus Query: 130 gtgcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctccccggccgcgc 189 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 102 gtgcaatggctgcagcgaacgctcccttcgctctcgtcagccgcctctccccggccgcgc 161 Query: 190 gcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccgg---gagaa 246 |||||||||||||||||||||| ||||||||||| |||||||||| |||||| ||||| Sbjct: 162 gcctgcccatccgtgcctggagagccgcgaggccggcgccgctctcgaccggcgggagaa 221 Query: 247 cccgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacgtcc 306 |||||||||||||||||||||| |||||||||||||| | ||||| |||||||||||||| Sbjct: 222 cccgcccgctctccgtggcctccgcggcgcaggagaatagggacaactccgtcgacgtcc 281 Query: 307 aagtcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgccgccctc 366 |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 282 aagtcagccaggcccagaacgccggcaaccagcagggcaatgcagtccagcgccgccctc 341 Query: 367 gtcgcgctgctggatttgacatctccccgttcgggctggtggacccgatgtcgccgatga 426 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 gtcgc---gctggatttgacatctccccgttcgggctagtggacccgatgtcgccgatga 398 Query: 427 gaacgatgaagcagatgctggacacgatggaccggctgttcgacgacgccgtggggttcc 486 | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 ggacgatgcggcagatgctggacacgatggaccggctgttcgacgacgccgtggggttcc 458 Query: 487 c 487 | Sbjct: 459 c 459 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 527 gccgcggatgccttgggacatcat 550 |||||||||||| ||||||||||| Sbjct: 496 gccgcggatgccgtgggacatcat 519
>emb|X67328.1|TAHSP266 T.aestivum mRNA for heat shock protein 26.6B Length = 1007 Score = 507 bits (256), Expect = e-140 Identities = 338/364 (92%), Gaps = 6/364 (1%) Strand = Plus / Plus Query: 124 tatctggtgcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctccccgg 183 |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| Sbjct: 72 tatctggtgcaatggccgcagcgaatgcccccttcgctctc---agccgcctctccccgg 128 Query: 184 ccgcgcgcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccggga 243 ||||||||||||| ||||||||||||| ||||||||||| || ||| |||||||||||| Sbjct: 129 ccgcgcgcctgccgttccgtgcctggagagccgcgaggccggccccggtctggaccggga 188 Query: 244 gaacccgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacg 303 ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| Sbjct: 189 gaacccgcccgctctccgtggcctccgcggcgcaggagaacagagacaactccgtcgacg 248 Query: 304 tccaagtcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgccgcc 363 ||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 249 tccaagtcagccaggcccagaacgccggcaaccagcagggcaatgcagtccagcgccgcc 308 Query: 364 ctcgtcgcgctgctggatttgacatctccccgttcgggctggtggacccgatgtcgccga 423 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 309 ctcgtcgc---gctggatttgacatctccccgttcgggctagtggacccgatgtcgccga 365 Query: 424 tgagaacgatgaagcagatgctggacacgatggaccggctgttcgacgacgccgtggggt 483 |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 tgaggacgatgcggcagatgctggacacgatggaccggctgttcgacgacgccgtggggt 425 Query: 484 tccc 487 |||| Sbjct: 426 tccc 429
>gb|AF097659.1|AF097659 Triticum aestivum heat shock protein HSP26 (hsp26.6) mRNA, hsp26.6-m allele, nuclear gene encoding chloroplast protein, complete cds Length = 1043 Score = 507 bits (256), Expect = e-140 Identities = 338/364 (92%), Gaps = 6/364 (1%) Strand = Plus / Plus Query: 124 tatctggtgcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctccccgg 183 |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| Sbjct: 75 tatctggtgcaatggccgcagcgaatgcccccttcgctctc---agccgcctctccccgg 131 Query: 184 ccgcgcgcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccggga 243 ||||||||||||| ||||||||||||| ||||||||||| || ||| |||||||||||| Sbjct: 132 ccgcgcgcctgccgttccgtgcctggagagccgcgaggccggccccggtctggaccggga 191 Query: 244 gaacccgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacg 303 ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| Sbjct: 192 gaacccgcccgctctccgtggcctccgcggcgcaggagaacagagacaactccgtcgacg 251 Query: 304 tccaagtcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgccgcc 363 ||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 252 tccaagtcagccaggcccagaacgccggcaaccagcagggcaatgcagtccagcgccgcc 311 Query: 364 ctcgtcgcgctgctggatttgacatctccccgttcgggctggtggacccgatgtcgccga 423 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 312 ctcgtcgc---gctggatttgacatctccccgttcgggctagtggacccgatgtcgccga 368 Query: 424 tgagaacgatgaagcagatgctggacacgatggaccggctgttcgacgacgccgtggggt 483 |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 tgaggacgatgcggcagatgctggacacgatggaccggctgttcgacgacgccgtggggt 428 Query: 484 tccc 487 |||| Sbjct: 429 tccc 432
>gb|AF097656.1|AF097656 Triticum aestivum heat shock protein HSP26 (hsp26.6) mRNA, hsp26.6-e allele, nuclear gene encoding chloroplast protein, complete cds Length = 1079 Score = 424 bits (214), Expect = e-115 Identities = 323/358 (90%), Gaps = 6/358 (1%) Strand = Plus / Plus Query: 130 gtgcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctccccggccgcgc 189 ||||||||||||| |||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 111 gtgcaatggctgctgcgaatgcccccttcgctctc---agtcgcctctccccggccgcgc 167 Query: 190 gcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccgggagaaccc 249 ||||||| |||||||||||||| ||||||||||| || ||| |||||||||||||||||| Sbjct: 168 gcctgccgatccgtgcctggagagccgcgaggccggccccggtctggaccgggagaaccc 227 Query: 250 gcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacgtccaag 309 ||||||||||||||||||| |||||||| ||||| | ||||| ||||||||||||||||| Sbjct: 228 gcccgctctccgtggcctccgcggcgcaagagaatagggacaactccgtcgacgtccaag 287 Query: 310 tcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgccgccctcgtc 369 ||||||||| || ||||| |||||||||||||||||| || ||||||||||| || || | Sbjct: 288 tcagccaggcccagaacggcggcaaccagcagggcaacgctgtccagcgccggccgcgcc 347 Query: 370 gcgctgctggatttgacatctccccgttcgggctggtggacccgatgtcgccgatgagaa 429 || || |||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 348 gc---gccggatttgacatctccccgttcgggctagtggacccgatgtcgccgatgagga 404 Query: 430 cgatgaagcagatgctggacacgatggaccggctgttcgacgacgccgtggggttccc 487 ||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 405 cgatgcggcagatgctggacacgatggaccggctgttcgatgacgccgtagggttccc 462 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 523 agatgccgcggatgccttgggacatcat 550 |||||||||||||||| ||||||||||| Sbjct: 495 agatgccgcggatgccgtgggacatcat 522
>gb|AF019144.1|AF019144 Agrostis stolonifera var. palustris low molecular weight heat shock protein mRNA, complete cds Length = 1022 Score = 260 bits (131), Expect = 4e-66 Identities = 307/360 (85%), Gaps = 18/360 (5%) Strand = Plus / Plus Query: 132 gcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctcc---ccggccgcg 188 |||||||||||||||| ||||||||||||||||||||||||||||||| || ||| || Sbjct: 129 gcaatggctgcagcgaacgcccccttcgctctcgtcagccgcctctcctctcctgccacg 188 Query: 189 cgcctgcccatccgtgcctggagggccgcgaggccagcgccgctctgga-ccgggagaac 247 |||||||| ||| |||||||| ||||||| || ||||||| ||| |||||||||| Sbjct: 189 cgcctgcctgcccgcgcctggagagccgcgacgc-agcgccg---tggcgccgggagaac 244 Query: 248 ccgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacgtcca 307 ||| |||||| || |||||| ||| ||||||| |||| ||||| ||||||||| ||||| Sbjct: 245 ccgtccgctcaccacggcctccgcgtcgcaggaaaacagggacaactccgtcgatgtcca 304 Query: 308 agtcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgccgccctcg 367 |||||||||| || || |||||||||||||| ||||| ||||| |||||||| || Sbjct: 305 agtcagccagaacggg------ggcaaccagcagggaaatgccgtccaacgccgcccgcg 358 Query: 368 tcgcgctgctggatttgacatctccccgttcgggctggtggacccgatgtcgccgatgag 427 || ||| |||||||||||||| |||||||||||||||||||||||||| || ||| | Sbjct: 359 ---cg-tgccggatttgacatctctccgttcgggctggtggacccgatgtcacccatgcg 414 Query: 428 aacgatgaagcagatgctggacacgatggaccggctgttcgacgacgccgtggggttccc 487 ||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 415 aaccatgcggcagatgctggacacgatggaccggctgttcgacgacaccgtggggttccc 474
>gb|AY153762.1| Agrostis stolonifera var. palustris chloroplast low molecular weight heat shock protein HSP26.7b gene, complete cds; nuclear gene for chloroplast product Length = 3897 Score = 202 bits (102), Expect = 9e-49 Identities = 231/272 (84%), Gaps = 9/272 (3%) Strand = Plus / Plus Query: 132 gcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctc---cccggccgcg 188 |||||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||| Sbjct: 2091 gcaatggctgcagcgaacgcccccttcgctctcgttagccgcctctcgtccccagccgcg 2150 Query: 189 cgcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccgggagaacc 248 |||||||| ||||| |||||||| ||||||||||| ||||||||| || |||||||| | Sbjct: 2151 cgcctgccaatccgcgcctggagagccgcgaggccggcgccgctcggggccgggagagca 2210 Query: 249 cgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacgtccaa 308 ||||||||| || |||||| ||| ||||||| |||| ||||| |||||||||||| ||| Sbjct: 2211 cgcccgctcaccacggcctccgcgtcgcaggacaacagggacaactccgtcgacgtgcaa 2270 Query: 309 gtcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgccgccctcgt 368 |||||||| || | || ||||||||||||||| || || |||||||||||||| || Sbjct: 2271 gtcagccaaaacgg---cggcggcaaccagcagggaaacgccgtccagcgccgcccgcgc 2327 Query: 369 cgcgctgctggatttgacatctccccgttcgg 400 ||| || ||||||||| || |||||||||| Sbjct: 2328 cgc---gcaggatttgacgtcgccccgttcgg 2356 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 399 gggctggtggacccgatgtcgccgatgagaacgatgaagcagatgctggacacgatggac 458 |||||||||||||||||||| |||||| |||| ||| |||||||||||||||||||||| Sbjct: 2453 gggctggtggacccgatgtcaccgatgcgaaccatgcggcagatgctggacacgatggac 2512 Query: 459 cggctgttcgacgacgccgtggggttccc 487 ||||||||||| ||||| ||||| ||||| Sbjct: 2513 cggctgttcgatgacgcggtgggcttccc 2541
>gb|AY153761.1| Agrostis stolonifera var. palustris chloroplast low molecular weight heat shock protein HSP26.7a gene, complete cds; nuclear gene for chloroplast product Length = 4216 Score = 190 bits (96), Expect = 3e-45 Identities = 202/236 (85%), Gaps = 6/236 (2%) Strand = Plus / Plus Query: 132 gcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctc---cccggccgcg 188 |||||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||| Sbjct: 2401 gcaatggctgcagcgaacgcccccttcgctctcgttagccgcctctcgtccccagccgcg 2460 Query: 189 cgcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccgggagaacc 248 |||||||| ||||| |||||||| |||||||| || ||||||||| || |||||||| | Sbjct: 2461 cgcctgccaatccgcgcctggagagccgcgagcccggcgccgctcggggccgggagagca 2520 Query: 249 cgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacgtccaa 308 ||||||||| || ||| || ||| ||||||| |||| ||||| |||||||||||| ||| Sbjct: 2521 cgcccgctcaccacggcttccgcgtcgcaggacaacagggacaactccgtcgacgtgcaa 2580 Query: 309 gtcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgccgccc 364 ||||||||| || | || ||||||||||||||| || || |||||||||||||| Sbjct: 2581 gtcagccagaacgg---cggcggcaaccagcagggaaacgccgtccagcgccgccc 2633 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 399 gggctggtggacccgatgtcgccgatgagaacgatgaagcagatgctggacacgatggac 458 |||||||||||||||||||| |||||| |||| ||| |||||||||||||||||||||| Sbjct: 2763 gggctggtggacccgatgtcaccgatgcgaaccatgcggcagatgctggacacgatggac 2822 Query: 459 cggctgttcgacgacgccgtggggttccc 487 ||||||||||||||||| ||||| ||||| Sbjct: 2823 cggctgttcgacgacgcggtgggcttccc 2851
>gb|AY153760.1| Agrostis stolonifera var. palustris chloroplast low molecular weight heat shock protein HSP26.8 gene, complete cds; nuclear gene for chloroplast product Length = 3098 Score = 184 bits (93), Expect = 2e-43 Identities = 228/272 (83%), Gaps = 12/272 (4%) Strand = Plus / Plus Query: 132 gcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctcc---ccggccgcg 188 |||||||||||||||| ||||||||||||||||||||||||||||||| || ||| || Sbjct: 835 gcaatggctgcagcgaacgcccccttcgctctcgtcagccgcctctcctctcctgccacg 894 Query: 189 cgcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccgggagaacc 248 |||||||| ||| |||||||| |||||||||||||||||| | | ||||||||||| Sbjct: 895 cgcctgcctgcccgcgcctggagagccgcgaggccagcgccggtggcggccgggagaacc 954 Query: 249 cgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacgtccaa 308 || |||||| || |||||| ||| ||||||| |||| ||||| ||||||||| |||||| Sbjct: 955 cgtccgctcaccacggcctccgcgtcgcaggaaaacagggacaactccgtcgatgtccaa 1014 Query: 309 gtcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgccgccctcgt 368 |||||||| ||||| |||||||||||||| ||||| ||||| |||||||| || Sbjct: 1015 gtcagcca------gaacgggggcaaccagcagggaaatgccgtccaacgccgcccgcgc 1068 Query: 369 cgcgctgctggatttgacatctccccgttcgg 400 || ||| |||||||||||||| |||||||| Sbjct: 1069 cg---tgccggatttgacatctctccgttcgg 1097 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 399 gggctggtggacccgatgtcgccgatgagaacgatgaagcagatgctggacacgatggac 458 |||||||||||||||||||| || ||| |||| ||| |||||||||||||||||||||| Sbjct: 1193 gggctggtggacccgatgtcacccatgcgaaccatgcggcagatgctggacacgatggac 1252 Query: 459 cggctgttcgacgacgccgtggggttccc 487 ||||||||||||||| ||||||||||||| Sbjct: 1253 cggctgttcgacgacaccgtggggttccc 1281
>gb|AY153758.1| Agrostis stolonifera var. palustris chloroplast low molecular weight heat shock protein HSP26.2 gene, complete cds; nuclear gene for chloroplast product Length = 3064 Score = 184 bits (93), Expect = 2e-43 Identities = 228/272 (83%), Gaps = 12/272 (4%) Strand = Plus / Plus Query: 132 gcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctcc---ccggccgcg 188 |||||||||||||||| ||||||||||||||||||||||||||||||| || ||| || Sbjct: 835 gcaatggctgcagcgaacgcccccttcgctctcgtcagccgcctctcctctcctgccacg 894 Query: 189 cgcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccgggagaacc 248 |||||||| ||| |||||||| |||||||||||||||||| | | ||||||||||| Sbjct: 895 cgcctgcctgcccgcgcctggagagccgcgaggccagcgccggtggcggccgggagaacc 954 Query: 249 cgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacgtccaa 308 || |||||| || |||||| ||| ||||||| |||| ||||| ||||||||| |||||| Sbjct: 955 cgtccgctcaccacggcctccgcgtcgcaggaaaacagggacaactccgtcgatgtccaa 1014 Query: 309 gtcagccaggaccggaacgccggcaaccagcagggcaatgcggtccagcgccgccctcgt 368 |||||||| ||||| |||||||||||||| ||||| ||||| |||||||| || Sbjct: 1015 gtcagcca------gaacgggggcaaccagcagggaaatgccgtccaacgccgcccgcgc 1068 Query: 369 cgcgctgctggatttgacatctccccgttcgg 400 || ||| |||||||||||||| |||||||| Sbjct: 1069 cg---tgccggatttgacatctctccgttcgg 1097 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 399 gggctggtggacccgatgtcgccgatgagaacgatgaagcagatgctggacacgatggac 458 |||||||||||||||||||| || ||| |||| ||| |||||||||||||||||||||| Sbjct: 1184 gggctggtggacccgatgtcacccatgcgaaccatgcggcagatgctggacacgatggac 1243 Query: 459 cggctgttcgacgacgccgtggggttccc 487 ||||||||||||||| ||||||||||||| Sbjct: 1244 cggctgttcgacgacaccgtggggttccc 1272
>gb|AY153759.1| Agrostis stolonifera var. palustris chloroplast low molecular weight heat shock protein HSP26.2m gene, complete cds; nuclear gene for chloroplast product Length = 2922 Score = 157 bits (79), Expect = 5e-35 Identities = 162/189 (85%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 132 gcaatggctgcagcgaccgcccccttcgctctcgtcagccgcctctcc---ccggccgcg 188 |||||||||||||||| ||||||||||| ||||||||||||||||||| || ||| || Sbjct: 837 gcaatggctgcagcgaacgcccccttcgttctcgtcagccgcctctcctctcctgccacg 896 Query: 189 cgcctgcccatccgtgcctggagggccgcgaggccagcgccgctctggaccgggagaacc 248 |||||||| ||| |||||||| |||||||||||||||||| | | ||||||||||| Sbjct: 897 cgcctgcctgcccgcgcctggagagccgcgaggccagcgccggtggcggccgggagaacc 956 Query: 249 cgcccgctctccgtggcctcggcggcgcaggagaacacggacagctccgtcgacgtccaa 308 || |||||| || |||||| ||| ||||||| |||| ||||| ||||||||| |||||| Sbjct: 957 cgtccgctcaccacggcctccgcgtcgcaggaaaacagggacaactccgtcgatgtccaa 1016 Query: 309 gtcagccag 317 ||||||||| Sbjct: 1017 gtcagccag 1025 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 399 gggctggtggacccgatgtcgccgatgagaacgatgaagcagatgctggacacgatggac 458 |||||||||||||||||||| || ||| |||| ||| |||||||||||||||||||||| Sbjct: 1187 gggctggtggacccgatgtcacccatgcgaaccatgcggcagatgctggacacgatggac 1246 Query: 459 cggctgttcgacgacgccgtggggttccc 487 ||||||||||||||| ||||||||||||| Sbjct: 1247 cggctgttcgacgacaccgtggggttccc 1275
>gb|L28712.1|MZEHSP26X Zea mays heat shock protein 26 (HSP26) mRNA, complete cds; nuclear gene for plastid product Length = 946 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 390 tccccgttcgggctggtggacccgatgtcgccgatgagaacgatgaagcagatgctggac 449 ||||||||||| | || |||||||||||||||||| | |||||| ||||||||||||| Sbjct: 340 tccccgttcggattagttgacccgatgtcgccgatgcggacgatgcggcagatgctggac 399 Query: 450 acgatggaccggctgttcgacgacgccgtggggttccc 487 ||||||||| |||||||||||||||||||||||||||| Sbjct: 400 acgatggacaggctgttcgacgacgccgtggggttccc 437 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 238 ccgggagaacccgcccgctctccgtggcctcggcggcgcaggagaacacggaca 291 |||||||| ||||| ||||| ||||||| || |||||||||||||||| ||||| Sbjct: 185 ccgggagagcccgctcgctcgccgtggcatccgcggcgcaggagaacagggaca 238
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 386 catctccccgttcgggctggtggacccgatgtcgccgatgagaacgatgaagcagatgct 445 ||||||||||||||| || ||||||||||||||||||||| | |||||| ||||||||| Sbjct: 7666980 catctccccgttcggcctcgtggacccgatgtcgccgatgcggacgatgcggcagatgct 7667039 Query: 446 ggacacgatggaccggctgttcgacgacg 474 |||||||||||||||| | |||||||||| Sbjct: 7667040 ggacacgatggaccggattttcgacgacg 7667068 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 247 cccgcccgctctccgtggcctcggcggcgcaggagaacacggaca 291 |||||| |||| |||||||||| |||||||||||||||| ||||| Sbjct: 7666841 cccgccagctcgccgtggcctccgcggcgcaggagaacagggaca 7666885 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 156 ttcgctctcgtcagccgcctctccccggccgcgcgcctgcccatccg 202 ||||||||||||||||| |||| || || |||||||| |||||||| Sbjct: 7666741 ttcgctctcgtcagccgtgtctcgccagcggcgcgcctccccatccg 7666787
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 386 catctccccgttcgggctggtggacccgatgtcgccgatgagaacgatgaagcagatgct 445 ||||||||||||||| || ||||||||||||||||||||| | |||||| ||||||||| Sbjct: 48310 catctccccgttcggcctcgtggacccgatgtcgccgatgcggacgatgcggcagatgct 48251 Query: 446 ggacacgatggaccggctgttcgacgacg 474 |||||||||||||||| | |||||||||| Sbjct: 48250 ggacacgatggaccggattttcgacgacg 48222 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 247 cccgcccgctctccgtggcctcggcggcgcaggagaacacggaca 291 |||||| |||| |||||||||| |||||||||||||||| ||||| Sbjct: 48449 cccgccagctcgccgtggcctccgcggcgcaggagaacagggaca 48405 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 156 ttcgctctcgtcagccgcctctccccggccgcgcgcctgcccatccg 202 ||||||||||||||||| |||| || || |||||||| |||||||| Sbjct: 48549 ttcgctctcgtcagccgtgtctcgccagcggcgcgcctccccatccg 48503
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 386 catctccccgttcgggctggtggacccgatgtcgccgatgagaacgatgaagcagatgct 445 ||||||||||||||| || ||||||||||||||||||||| | |||||| ||||||||| Sbjct: 7664815 catctccccgttcggcctcgtggacccgatgtcgccgatgcggacgatgcggcagatgct 7664874 Query: 446 ggacacgatggaccggctgttcgacgacg 474 |||||||||||||||| | |||||||||| Sbjct: 7664875 ggacacgatggaccggattttcgacgacg 7664903 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 247 cccgcccgctctccgtggcctcggcggcgcaggagaacacggaca 291 |||||| |||| |||||||||| |||||||||||||||| ||||| Sbjct: 7664676 cccgccagctcgccgtggcctccgcggcgcaggagaacagggaca 7664720 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 156 ttcgctctcgtcagccgcctctccccggccgcgcgcctgcccatccg 202 ||||||||||||||||| |||| || || |||||||| |||||||| Sbjct: 7664576 ttcgctctcgtcagccgtgtctcgccagcggcgcgcctccccatccg 7664622
>dbj|AK120048.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H09, full insert sequence Length = 1013 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 386 catctccccgttcgggctggtggacccgatgtcgccgatgagaacgatgaagcagatgct 445 ||||||||||||||| || ||||||||||||||||||||| | |||||| ||||||||| Sbjct: 369 catctccccgttcggcctcgtggacccgatgtcgccgatgcggacgatgcggcagatgct 428 Query: 446 ggacacgatggaccggctgttcgacgacg 474 |||||||||||||||| | |||||||||| Sbjct: 429 ggacacgatggaccggattttcgacgacg 457 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 247 cccgcccgctctccgtggcctcggcggcgcaggagaacacggaca 291 |||||| |||| |||||||||| |||||||||||||||| ||||| Sbjct: 230 cccgccagctcgccgtggcctccgcggcgcaggagaacagggaca 274 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 156 ttcgctctcgtcagccgcctctccccggccgcgcgcctgcccatccg 202 ||||||||||||||||| |||| || || |||||||| |||||||| Sbjct: 130 ttcgctctcgtcagccgtgtctcgccagcggcgcgcctccccatccg 176
>dbj|AK063618.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-E01, full insert sequence Length = 995 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 386 catctccccgttcgggctggtggacccgatgtcgccgatgagaacgatgaagcagatgct 445 ||||||||||||||| || ||||||||||||||||||||| | |||||| ||||||||| Sbjct: 369 catctccccgttcggcctcgtggacccgatgtcgccgatgcggacgatgcggcagatgct 428 Query: 446 ggacacgatggaccggctgttcgacgacg 474 |||||||||||||||| | |||||||||| Sbjct: 429 ggacacgatggaccggattttcgacgacg 457 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 247 cccgcccgctctccgtggcctcggcggcgcaggagaacacggaca 291 |||||| |||| |||||||||| |||||||||||||||| ||||| Sbjct: 230 cccgccagctcgccgtggcctccgcggcgcaggagaacagggaca 274 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 156 ttcgctctcgtcagccgcctctccccggccgcgcgcctgcccatccg 202 ||||||||||||||||| |||| || || |||||||| |||||||| Sbjct: 130 ttcgctctcgtcagccgtgtctcgccagcggcgcgcctccccatccg 176
>dbj|AK120045.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-F09, full insert sequence Length = 1013 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 386 catctccccgttcgggctggtggacccgatgtcgccgatgagaacgatgaagcagatgct 445 ||||||||||||||| || ||||||||||||||||||||| | |||||| ||||||||| Sbjct: 369 catctccccgttcggcctcgtggacccgatgtcgccgatgcggacgatgcggcagatgct 428 Query: 446 ggacacgatggaccggctgttcgacga 472 |||||||||||||||| | |||||||| Sbjct: 429 ggacacgatggaccggattttcgacga 455 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 247 cccgcccgctctccgtggcctcggcggcgcaggagaacacggaca 291 |||||| |||| |||||||||| |||||||||||||||| ||||| Sbjct: 230 cccgccagctcgccgtggcctccgcggcgcaggagaacagggaca 274 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 156 ttcgctctcgtcagccgcctctccccggccgcgcgcctgcccatccg 202 ||||||||||||||||| |||| || || |||||||| |||||||| Sbjct: 130 ttcgctctcgtcagccgtgtctcgccagcggcgcgcctccccatccg 176
>dbj|AB020973.1| Oryza sativa mRNA for heat shock protein 26, complete cds Length = 1000 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 392 cccgttcgggctggtggacccgatgtcgccgatgagaacgatgaagcagatgctggacac 451 ||||||||| || ||||||||||||||||||||| | |||||| ||||||||||||||| Sbjct: 361 cccgttcggcctcgtggacccgatgtcgccgatgcggacgatgcggcagatgctggacac 420 Query: 452 gatggaccggctgttcgacgacg 474 |||||||||| |||||||||||| Sbjct: 421 gatggaccggatgttcgacgacg 443 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 247 cccgcccgctctccgtggcctcggcggcgcaggagaacacggaca 291 |||||| |||| |||||||||| |||||||||||||||| ||||| Sbjct: 216 cccgccagctcgccgtggcctccgcggcgcaggagaacagggaca 260
>ref|XM_511436.1| PREDICTED: Pan troglodytes similar to mKIAA1501 protein (LOC454610), mRNA Length = 6622 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 209 gagggccgcgaggccagcgccgc 231 ||||||||||||||||||||||| Sbjct: 4997 gagggccgcgaggccagcgccgc 4975
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 357 cgccgccctcgtcgcgctgctgg 379 ||||||||||||||||||||||| Sbjct: 4138715 cgccgccctcgtcgcgctgctgg 4138737
>dbj|AB006044.1| Nicotiana tomentosiformis gene for heat shock protein 26, partial cds Length = 1299 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 408 gacccgatgtcgccgatgagaacgatgaagcagatgctggacacgatggac 458 ||||| ||||| ||||||||||| ||| ||||||| ||||||| |||||| Sbjct: 969 gacccaatgtctccgatgagaacaatgcggcagatgatggacactatggac 1019
>dbj|AB006041.1| Nicotiana tabacum gene for heat shock protein 26 (Type I), partial cds Length = 1299 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 408 gacccgatgtcgccgatgagaacgatgaagcagatgctggacacgatggac 458 ||||| ||||| ||||||||||| ||| ||||||| ||||||| |||||| Sbjct: 969 gacccaatgtctccgatgagaacaatgcggcagatgatggacactatggac 1019
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 260 cgtggcctcggcggcgcaggaga 282 ||||||||||||||||||||||| Sbjct: 3382752 cgtggcctcggcggcgcaggaga 3382730 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 gaccggctgttcgacgacgc 475 |||||||||||||||||||| Sbjct: 68291 gaccggctgttcgacgacgc 68272
>dbj|D88584.1| Nicotiana tabacum mRNA for heat shock protein 26 (Type I), complete cds Length = 890 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 408 gacccgatgtcgccgatgagaacgatgaagcagatgctggacacgatggac 458 ||||| ||||| ||||||||||| ||| ||||||| ||||||| |||||| Sbjct: 358 gacccaatgtctccgatgagaacaatgcggcagatgatggacactatggac 408
>gb|BT016649.1| Zea mays clone Contig482 mRNA sequence Length = 1668 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 353 ccagcgccgccctcgtcgcgctgctg 378 ||||||||| |||||||||||||||| Sbjct: 729 ccagcgccgacctcgtcgcgctgctg 754
>gb|BT018578.1| Zea mays clone EL01N0444F03.d mRNA sequence Length = 1523 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 353 ccagcgccgccctcgtcgcgctgctg 378 ||||||||| |||||||||||||||| Sbjct: 771 ccagcgccgacctcgtcgcgctgctg 796
>gb|AY506357.1| Homo sapiens truncated epidermal growth factor (beta-urogastrone) (EGF) gene, complete cds Length = 103052 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 78 atctcagtctctctgctttcacatct 103 ||||||||||||||||||||| |||| Sbjct: 73610 atctcagtctctctgctttcatatct 73585
>gb|AC005509.1|AC005509 Homo sapiens chromosome 4 clone B200N5 map 4q25, complete sequence Length = 143391 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 78 atctcagtctctctgctttcacatct 103 ||||||||||||||||||||| |||| Sbjct: 136317 atctcagtctctctgctttcatatct 136292
>gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, complete sequence Length = 183554 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atctcctagagaccatctcag 84 ||||||||||||||||||||| Sbjct: 87548 atctcctagagaccatctcag 87568
>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence Length = 256632 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 atctcctagagaccatctcag 84 ||||||||||||||||||||| Sbjct: 203147 atctcctagagaccatctcag 203127
>dbj|AB006042.1| Nicotiana tabacum gene for truncated protein of heat shock protein 26 (Type II), partial cds Length = 1164 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 406 tggacccgatgtcgccgatgagaacgatgaagcagatgctggacacgatggac 458 ||||||| ||||| ||||||||||| ||| ||||||| |||| || |||||| Sbjct: 835 tggacccaatgtctccgatgagaacaatgcggcagatgatggatactatggac 887
>dbj|AB006040.1| Nicotiana tabacum mRNA for truncated protein of heat shock protein 26 (Type II), complete cds Length = 919 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 406 tggacccgatgtcgccgatgagaacgatgaagcagatgctggacacgatggac 458 ||||||| ||||| ||||||||||| ||| ||||||| |||| || |||||| Sbjct: 373 tggacccaatgtctccgatgagaacaatgcggcagatgatggatactatggac 425
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cgccgccctcgtcgcgctgc 376 |||||||||||||||||||| Sbjct: 742761 cgccgccctcgtcgcgctgc 742742
>ref|XM_422230.1| PREDICTED: Gallus gallus similar to chromosome 1 open reading frame 9; membrane protein CH1 (LOC424386), partial mRNA Length = 732 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gccgcctctccccggccgcg 188 |||||||||||||||||||| Sbjct: 113 gccgcctctccccggccgcg 132
>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic region, partial sequence Length = 161264 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 cgccggcaaccagcagggca 345 |||||||||||||||||||| Sbjct: 72934 cgccggcaaccagcagggca 72953
>ref|XM_870675.1| PREDICTED: Bos taurus similar to epiplakin 1 (LOC524939), mRNA Length = 9954 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 gcgccgccctcgtcgcgctgctgg 379 |||||||||||||| ||||||||| Sbjct: 8696 gcgccgccctcgtctcgctgctgg 8719
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ggctgttcgacgacgccgtg 479 |||||||||||||||||||| Sbjct: 2131349 ggctgttcgacgacgccgtg 2131330
>emb|AL589657.4| Human DNA sequence from clone RP11-113P17 on chromosome 6, complete sequence Length = 42564 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 cctggaggcacacactgaaa 24 |||||||||||||||||||| Sbjct: 20559 cctggaggcacacactgaaa 20540
>ref|XM_786770.1| PREDICTED: Strongylocentrotus purpuratus similar to dedicator of cytokinesis 7 (LOC587014), partial mRNA Length = 4614 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ccatctcagtctctctgctt 95 |||||||||||||||||||| Sbjct: 4023 ccatctcagtctctctgctt 4004
>ref|XM_783402.1| PREDICTED: Strongylocentrotus purpuratus similar to Dedicator of cytokinesis protein 7 (LOC583496), mRNA Length = 3515 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ccatctcagtctctctgctt 95 |||||||||||||||||||| Sbjct: 1386 ccatctcagtctctctgctt 1367
>gb|DQ115840.1| Cyanobacteria phage AS-1 contig_33 genomic sequence Length = 1404 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tccccggccgcgcgcctgcc 196 |||||||||||||||||||| Sbjct: 1249 tccccggccgcgcgcctgcc 1230
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gccaggaccggaacgccggc 332 |||||||||||||||||||| Sbjct: 3270444 gccaggaccggaacgccggc 3270463
>emb|CR353128.1| Gallus gallus finished cDNA, clone ChEST821i9 Length = 934 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gccgcctctccccggccgcg 188 |||||||||||||||||||| Sbjct: 116 gccgcctctccccggccgcg 135
>gb|AC006385.3|AC006385 Homo sapiens BAC clone RP11-559J5 from 2, complete sequence Length = 173508 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ctggaggcacacactgaaat 25 |||||||||||||||||||| Sbjct: 44578 ctggaggcacacactgaaat 44597
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cctctccccggccgcgcgcc 192 |||||||||||||||||||| Sbjct: 2146214 cctctccccggccgcgcgcc 2146233
>emb|CR377223.6| Zebrafish DNA sequence from clone DKEY-12O15 in linkage group 18, complete sequence Length = 211465 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 atgtcgccgatgagaacgat 433 |||||||||||||||||||| Sbjct: 38476 atgtcgccgatgagaacgat 38495
>dbj|AB096201.1| Cercopithecine herpesvirus 1 UL21, UL20, UL19, UL18, UL15 genes for tegument protein, integral membrane protein, major capsid protein, capsid protein, DNA packaging protein, partial and complete cds, genotypes: BVpt Length = 7910 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 gcgccgccctcgtcgcgctgctgg 379 |||||||||||||||| ||||||| Sbjct: 1715 gcgccgccctcgtcgccctgctgg 1738
>emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 in linkage group 5, complete sequence Length = 142918 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ctcagtctctctgctttcac 99 |||||||||||||||||||| Sbjct: 6116 ctcagtctctctgctttcac 6097
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cagcgccgccctcgtcgcgc 373 |||||||||||||||||||| Sbjct: 4407817 cagcgccgccctcgtcgcgc 4407836 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,261,137 Number of Sequences: 3902068 Number of extensions: 3261137 Number of successful extensions: 71894 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70843 Number of HSP's gapped (non-prelim): 1028 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
