>KRA44_HUMAN (Q9BYR3) Keratin-associated protein 4-4 (Keratin-associated protein|
           4.4) (Ultrahigh sulfur keratin-associated protein 4.4)
          Length = 166

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 41/136 (30%), Positives = 52/136 (38%), Gaps = 7/136 (5%)
 Frame = +1

Query: 190 CQSPNSRRTPSCPSCQSLNYLTLSCPKCHTL*CRKRQRSPKCHTPWCRRRQ---RMSCRH 360
           CQ+   R T   PSC   +     C  C T  CR     P C    C R Q    + C+ 
Sbjct: 26  CQTTCCRTTCCRPSCCVSSCCRPQC--CQTTCCRTTCCHPSCCVSSCCRPQCCQSVCCQP 83

Query: 361 TLLCPSS-RSLNYRIWLC-PRCRRRQRSLKCHTPWRRRCQSMSCRRTLLCPSPRSLNYLI 534
           T   P   ++   R   C P C R Q    C       CQS+ C+ T  CPS     Y +
Sbjct: 84  TCCRPQCCQTTCCRTTCCRPSCCRPQ----C-------CQSVCCQPTCCCPS-----YCV 127

Query: 535 QLC--PRCQRNTIYHT 576
             C  P+C + T   T
Sbjct: 128 SSCCRPQCCQTTCCRT 143

>CRIM1_BRARE (Q7T3Q2) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)|
          Length = 1027

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
 Frame = +1

Query: 190 CQSPNSRRTPSCPSCQSLNYLTLSCPKCHTL-*CRKRQRS---------PKCHTPWCRRR 339
           C +P +     CP C+   Y+T++ P C +L  C   ++S           C T  C+ R
Sbjct: 436 CLNPVTVPGECCPVCEEPTYITMAPPACGSLDNCTLLEQSCAFGFRLDPSGCRTCACKSR 495

Query: 340 QRM------SCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKC 447
           + +      SC  TL CP     +  I  C  C+ R R  KC
Sbjct: 496 EELCGGLMASC--TLKCPFGFQTD--IHGCDVCQCRPRHKKC 533

>KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-associated protein|
           4.5) (Ultrahigh sulfur keratin-associated protein 4.5)
          Length = 186

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 32/102 (31%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
 Frame = +1

Query: 220 SCPSCQSLNYLTLSCPKC-HTL*CRKRQRSPKCHTPWCRRR--QRMSCRHTLLCPSSRSL 390
           S  S QS       CP C  T  CR     P C  P C +    + +C H   C SS   
Sbjct: 8   SVSSEQSCGLENCCCPSCCQTTCCRTTCCRPSCCKPQCCQSVCYQPTCCHPSCCISSCCR 67

Query: 391 NY--RIWLCPRCRRRQRSLKCHTPWRRRCQSMSCRRTLLCPS 510
            Y      C  C  R     C T     C++  CR T  CPS
Sbjct: 68  PYCCESSCCRPCCCRPSC--CQTTC---CRTTCCRTTCCCPS 104

>KR410_HUMAN (Q9BYQ7) Keratin-associated protein 4-10 (Keratin-associated|
           protein 4.10) (Ultrahigh sulfur keratin-associated
           protein 4.10)
          Length = 127

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 30/108 (27%), Positives = 36/108 (33%), Gaps = 3/108 (2%)
 Frame = +1

Query: 190 CQSPNSRRTPSCPSCQSLNYLTLSCPK---CHTL*CRKRQRSPKCHTPWCRRRQRMSCRH 360
           C+    + T  CPSC   +    SC +   C T  CR     P C    C+   R SC  
Sbjct: 25  CRPSCCQTTCCCPSCVVSSCCRPSCSQTTCCQTTCCRPSCCRPVC----CQTTCRPSCGV 80

Query: 361 TLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRCQSMSCRRTLLC 504
           +  C                    R L C T  R  C   SC R L C
Sbjct: 81  SSCC--------------------RPLCCQTTCRPSCGVSSCCRPLCC 108

>PRM2_MOUSE (P07978) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:|
           PP2-A; PP2-C; PP2-D; PP2-B (Protamine MP2)]
          Length = 107

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 26/67 (38%), Positives = 31/67 (46%)
 Frame = +1

Query: 292 KRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRC 471
           KR+RS       CRRR+R SCRH       R  + R      CRR +R        RRRC
Sbjct: 65  KRRRS-------CRRRRRHSCRH-------RRRHRR-----GCRRSRR--------RRRC 97

Query: 472 QSMSCRR 492
           +   CRR
Sbjct: 98  RCRKCRR 104

>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)|
          Length = 518

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 24/60 (40%), Positives = 26/60 (43%)
 Frame = -1

Query: 429 ASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPASQGVALRAREGE 250
           A PA  A P A   A+ A A    A A P  +PA    A  AP A  A    A  A EGE
Sbjct: 455 APPADGAAPPAEAAAAPADAAAPAAEAAPAEAPAAEATAAEAPPAEAAPAEAAPAAAEGE 514

>PF21A_HUMAN (Q96BD5) PHD finger protein 21A (BRAF35-HDAC complex protein BHC80)|
           (BHC80a)
          Length = 680

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 286 CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPW 459
           CRK  +   C T  C R   + C    L P  +++   +W+CPRC+ +    +   PW
Sbjct: 494 CRKSGQLLMCDT--CSRVYHLDC----LDPPLKTIPKGMWICPRCQDQMLKKEEAIPW 545

>KR413_HUMAN (Q9BYU7) Keratin-associated protein 4-13 (Keratin-associated|
           protein 4.13) (Ultrahigh sulfur keratin-associated
           protein 4.13)
          Length = 106

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
 Frame = +1

Query: 271 CHTL*CRKRQRSPKCHTPWCRRR---QRMSCRHTLLCPSSRSLNYRIWLC--PRCRRRQR 435
           C T  CR     P C  P C R    Q + C+ T  CPS     Y +  C  P+C +  R
Sbjct: 26  CQTTCCRTTCCRPSCCRPSCCRPQCCQSVCCQPTCCCPS-----YCVSSCCRPQCCQTTR 80

Query: 436 SLKCHTPWRR------RCQSMSCRRTLLC 504
              C T   R      RC    C ++L C
Sbjct: 81  ---CRTTCCRPSCCVSRCYRPHCGQSLCC 106

>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated|
           protein 10.5) (High sulfur keratin-associated protein
           10.5) (Keratin-associated protein 18-5)
           (Keratin-associated protein 18.5)
          Length = 271

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
 Frame = +1

Query: 190 CQSP-NSRRTPSC--PSCQSLNYLTLSCPKCHTL*CRKRQRSPKCHTPWCRRR-----QR 345
           CQS   S  TPSC  P+C + +    +C  C  + C+     P C  P C +      Q+
Sbjct: 61  CQSGCTSSCTPSCCQPACCASSPCQQAC--CVPVCCK-----PVCCLPTCSKDSSSCCQQ 113

Query: 346 MSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRCQSMSCRRTLLCPSPRSLN 525
            SC+ T    SS   +  + +C  C+       C       CQ  SC+ T    SP   +
Sbjct: 114 SSCQPTCCASSSCQQSCCVPVC--CKPVCCVPTCSEDSSSCCQHSSCQPTCCTSSPCQQS 171

Query: 526 YLIQLC 543
             + +C
Sbjct: 172 CYVPVC 177

>PF21A_MOUSE (Q6ZPK0) PHD finger protein 21A (BRAF35-HDAC complex protein BHC80)|
           (mBHC80) (BHC80a)
          Length = 659

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 286 CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPW 459
           CRK  +   C T  C R   + C    L P  +++   +W+CPRC+ +    +   PW
Sbjct: 474 CRKSGQLLMCDT--CSRVYHLDC----LEPPLKTIPKGMWICPRCQDQMLKKEEAIPW 525

>HYPF_SYNY3 (Q55638) Carbamoyltransferase hypF (EC 2.1.3.-) (Carbamoyl|
           phosphate-converting enzyme hypF) ([NiFe]-hydrogenase
           maturation factor hypF) (Hydrogenase maturation protein
           hypF)
          Length = 767

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/74 (28%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
 Frame = +1

Query: 349 SCRHTLLCPSSRSLNYRIWLCPRCRRRQRSL------KCHTPWRRRCQSMSCRRTLLCPS 510
           +C   L  PS R   Y    C  C  R   +      +C T   R  Q   C R    P 
Sbjct: 109 ACLTELFDPSDRRYLYPFINCTHCGPRYTIIEALPYDRCRTTMARFRQCTDCEREYKQPG 168

Query: 511 PRSLNYLIQLCPRC 552
            R  +     CPRC
Sbjct: 169 DRRFHAQPNACPRC 182

>PRM2_RATFU (Q91VE1) Protamine-2 (Protamine-P2) (Sperm histone P2)|
          Length = 105

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/55 (38%), Positives = 24/55 (43%)
 Frame = +1

Query: 286 CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCH 450
           CR+R+R   CH    RRR R  CR        RS   R   C +CRR      CH
Sbjct: 68  CRRRRRHSCCH----RRRHRRGCR--------RSRRRRRCKCRKCRRH-----CH 105



 Score = 29.6 bits (65), Expect = 6.5
 Identities = 25/67 (37%), Positives = 30/67 (44%)
 Frame = +1

Query: 292 KRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRC 471
           KR+RS       CRRR+R SC H       R  + R      CRR +R        RRRC
Sbjct: 63  KRRRS-------CRRRRRHSCCH-------RRRHRR-----GCRRSRR--------RRRC 95

Query: 472 QSMSCRR 492
           +   CRR
Sbjct: 96  KCRKCRR 102

>OPAP_DROME (P23488) Male-specific opa-containing protein precursor (Protein|
           dromsopa)
          Length = 83

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 23/55 (41%), Positives = 23/55 (41%)
 Frame = -1

Query: 450 VALQAPLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPA 286
           VAL  P   PA    P A      A A    AAA P A PAP      AP A PA
Sbjct: 15  VALARPQEDPANLPAPEAAAAPPAAAAAPPAAAAAPPAPPAPPAA---APQAAPA 66

>FBLN4_MOUSE (Q9WVJ9) EGF-containing fibulin-like extracellular matrix protein 2|
           precursor (Fibulin-4) (FIBL-4) (Mutant p53-binding
           protein 1)
          Length = 443

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 11  CLSLIDAHKQEHHAAQQRHGLLCLPRGSAALMQLHEQCSTTP 136
           CL++ +A K E        G LCLPR +A +  LH +    P
Sbjct: 58  CLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPP 99

>MEGF6_HUMAN (O75095) Multiple epidermal growth factor-like domains 6 precursor|
            (EGF-like domain-containing protein 3) (Multiple EGF-like
            domain protein 3)
          Length = 1229

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 22/89 (24%), Positives = 34/89 (38%)
 Frame = +1

Query: 286  CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRR 465
            C   +R P+C      R  R  CRH+  C +    +     C  C       KC +P  R
Sbjct: 872  CPAGRRGPRCAEKCLPRDVRAGCRHSGGCLNGGLCDPHTGRC-LCPAGWTGDKCQSPCLR 930

Query: 466  RCQSMSCRRTLLCPSPRSLNYLIQLCPRC 552
                 +C +   CP   + +++   C RC
Sbjct: 931  GWFGEACAQRCSCPPGAACHHVTGAC-RC 958

>CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cyclin-dependent|
           kinase inhibitor p57) (p57KIP2)
          Length = 316

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = -1

Query: 438 APLASPAPWAQPNAVVQASGAR-A*QGVAAAHPLASPAPRGVALR--APLALPASQGVAL 268
           AP  +PAP   P+A  Q S  + A QG     PLA     G++ R  A  A  ++ G A+
Sbjct: 205 APAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAI 264

Query: 267 RAREGEVV 244
           +   G ++
Sbjct: 265 KKLSGPLI 272



 Score = 30.4 bits (67), Expect = 3.8
 Identities = 22/55 (40%), Positives = 24/55 (43%)
 Frame = -1

Query: 450 VALQAPLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPA 286
           V   AP  +PAP A P A   A    A     A  P  +PAP  VA  AP   PA
Sbjct: 153 VLAPAPAPAPAPVAAPVAAPVAVAVLA--PAPAPAPAPAPAPAPVAAPAPAPAPA 205



 Score = 29.3 bits (64), Expect = 8.5
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -1

Query: 435 PLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPA 286
           P+ +PAP   P  V  A+   A   VA   P  +PAP      AP+A PA
Sbjct: 152 PVLAPAPAPAPAPV--AAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPA 199

>FBLN4_HUMAN (O95967) EGF-containing fibulin-like extracellular matrix protein 2|
           precursor (Fibulin-4) (FIBL-4) (UPH1 protein)
          Length = 443

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 11  CLSLIDAHKQEHHAAQQRHGLLCLPRGSAALMQLHEQCSTTP 136
           CL++ +A K E        G LCLPR +A +  LH +    P
Sbjct: 58  CLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPPPP 99

>FBLN4_CRIGR (O55058) EGF-containing fibulin-like extracellular matrix protein 2|
           precursor (Fibulin-4) (FIBL-4) (H411 protein)
          Length = 443

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 11  CLSLIDAHKQEHHAAQQRHGLLCLPRGSAALMQLHEQCSTTP 136
           CL++ +A K E        G LCLPR +A +  LH +    P
Sbjct: 58  CLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPPPP 99

>FTSZ1_RHIME (P30327) Cell division protein ftsZ homolog 1|
          Length = 590

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
 Frame = -1

Query: 450 VALQAPLASPAPWAQPNAVVQA--------SGARA*QGVAAAHPLASPAPRGVALRAPLA 295
           +A +A +A+PAP  QP+   +A        +G    +      P A PAPR V ++AP+ 
Sbjct: 394 IAARAQVAAPAPQPQPHLQEEAFRPQSKLFAGVAPTEAAPVMRP-AQPAPRPVEMQAPVQ 452

Query: 294 LPASQGVALRAREGEVVQ 241
            P  Q   ++    +VV+
Sbjct: 453 -PQMQAQPVQQEPTQVVR 469

>DP87_DICDI (Q04503) Prespore protein DP87 precursor|
          Length = 555

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 3/131 (2%)
 Frame = +1

Query: 190 CQSPNSRRTPSCPSCQSLNYLT-LSCPKCHTL*CRKRQRSPKCHTPWCRRRQRMSCRHTL 366
           C+S  S  T  C S +S  YL  +SC       C K++        +C  R   +C   L
Sbjct: 29  CESHRSEYT--CKSDRSCAYLPFVSC-------CCKKEF-------FCVNRDHRNCCDDL 72

Query: 367 LCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRCQSMSCR-RTLLCPSPRSLN-YLIQL 540
            C  +        +   C+  +  +  H+P    C+S+ C  R + C    S   Y    
Sbjct: 73  SCAKNTRTGEIFEIWSSCKPHRDFVPYHSPNTTTCESLGCEARGMECEWVESSPCYGTSC 132

Query: 541 CPRCQRNTIYH 573
           CPR  R   +H
Sbjct: 133 CPRIPRCVGHH 143

>MTB1_BACSQ (Q9LAI2) Modification methylase BslI (EC 2.1.1.113) (N-4|
           cytosine-specific methyltransferase BslI) (M.BslI)
          Length = 912

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +1

Query: 202 NSRRTPSCPSCQSLNYLTLSCPKCHTL*CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSS 381
           + RR P CPSC SLN    S P+ +        RS +C +P+C  R + +         S
Sbjct: 464 DQRRIP-CPSCGSLNISGNSYPEIN-------NRSWECKSPYCPDRSKSNRGKRY----S 511

Query: 382 RSLNYRIW 405
           +  NY  W
Sbjct: 512 KKSNYMQW 519

>PRM2_RAT (P11248) Protamine-2 (Protamine-P2) (Sperm histone P2)|
          Length = 104

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 26/76 (34%), Positives = 33/76 (43%)
 Frame = +1

Query: 262 CPKCHTL*CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSL 441
           C + H +   KR+RS       CRRR+R SCRH       R  + R      CRR +R  
Sbjct: 54  CKRLHRI--HKRRRS-------CRRRRRHSCRH-------RRRHRR-----GCRRSRR-- 90

Query: 442 KCHTPWRRRCQSMSCR 489
                 RR C+   CR
Sbjct: 91  ------RRSCRCRKCR 100

>HSPC_ELECI (P83183) Cysteine-rich protamine|
          Length = 84

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = +1

Query: 322 PWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSL--KCHTPWRRRCQSMSCRRT 495
           P CR R +  CR       SRS       C RCRRR   +  KC    RRR +    RR 
Sbjct: 6   PRCRPRCKPRCR-------SRSKKR----CRRCRRRCSRIVKKC---CRRRSKCCRRRRR 51

Query: 496 LLCPSPR 516
             CP PR
Sbjct: 52  CPCPCPR 58

>SSL1_YEAST (Q04673) Suppressor of stem-loop protein 1 (General transcription|
           and DNA repair factor IIH subunit SSL1) (TFIIH subunit
           SSL1)
          Length = 461

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 12/130 (9%)
 Frame = +1

Query: 214 TPSCPSCQS-LNYLTLSCPKCHTL*CRKRQRSPKCHTPWCRRRQRMSCRHTLL-----CP 375
           TP+  SC S L Y    CP CH+  C      P C              H L+       
Sbjct: 332 TPTFCSCHSKLVYGGYFCPNCHSKVCSLPTVCPCCDLMLILSTHLARSYHHLMPLKTFAE 391

Query: 376 SSRSLNYRIWLCPRCRRRQRSLKCH------TPWRRRCQSMSCRRTLLCPSPRSLNYLIQ 537
              +  +R   C  C+ R   LK H      T  R RC+   C++         ++ ++ 
Sbjct: 392 VPTTEKFRSEDCFSCQSRFPILKNHKNGKLLTSSRYRCE--DCKQEFCVDCDVFIHEILH 449

Query: 538 LCPRCQRNTI 567
            CP C+   +
Sbjct: 450 NCPGCESKPV 459

>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding|
            protein) (NRE-binding protein) (DBP-5) (Bax antagonist
            selected in saccharomyces 1) (BASS1)
          Length = 2426

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = +1

Query: 292  KRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTP-WRRR 468
            KR+RSPK H    R R+R           S S + R  +  R R   R  + HTP  RRR
Sbjct: 1890 KRKRSPK-HRSKSRERKRKR---------SSSRDNRKTVRARSRTPSRRSRSHTPSRRRR 1939

Query: 469  CQSMSCRRTL-LCPSPRS 519
             +S+  RR+  + PS RS
Sbjct: 1940 SRSVGRRRSFSISPSRRS 1957

>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated|
           protein 10.1) (High sulfur keratin-associated protein
           10.1) (Keratin-associated protein 18-1)
           (Keratin-associated protein 18.1)
          Length = 282

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 30/114 (26%), Positives = 38/114 (33%), Gaps = 6/114 (5%)
 Frame = +1

Query: 190 CQSP-NSRRTPSCPSCQSLNYLTLSCPKCHTL*CRKRQRSPKCHTPWCRRR-----QRMS 351
           CQS   S  TPSC    S      +   C    C      P C  P C +      Q+ S
Sbjct: 67  CQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCMPVCCKPVCCLPTCSKDSSSCCQQSS 126

Query: 352 CRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRCQSMSCRRTLLCPSP 513
           C+ T    SS   +  + +C  C+       C       CQ  SC       SP
Sbjct: 127 CQPTCCASSSSQQSCCVPVC--CKPVCYVPTCSESSSSCCQQSSCHPACCTSSP 178

>PRTC1_PORGI (P59916) Collagenase precursor (EC 3.4.-.-)|
          Length = 334

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 65  HGLLCLPRGSAALMQLHEQCSTTPRGGCAR 154
           HG LC+       + LHE  S+  RG CA+
Sbjct: 96  HGALCMAVSGKCYLSLHEHNSSANRGACAQ 125

>IF2_PSEPK (Q88DV7) Translation initiation factor IF-2|
          Length = 846

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -1

Query: 390 QASGARA*QGVAAAHPLASPAPRGVALRAPLA--LPASQGVALRARE 256
           QA+G+ A     AA P  +PA   VA  AP+    PAS+  A RA E
Sbjct: 137 QAAGSAAAAPAPAAKPEPAPAAAPVAAPAPVVADAPASEDAAARAAE 183

>ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing protein 3|
          Length = 950

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +1

Query: 259 SCPKCHTL*CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPR---CRRR 429
           +CP  H    RK +        +C    +   +HTLLCP       R  +CPR   C+  
Sbjct: 736 NCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTLLCPDFA----RRGICPRGSQCQLL 791

Query: 430 QRSLKCH 450
            R+ K H
Sbjct: 792 HRNQKRH 798

>PF21B_HUMAN (Q96EK2) PHD finger protein 21B|
          Length = 531

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +1

Query: 274 HTL*CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHT 453
           H   C++      C T  C     +SC    L P  ++    +W+CPRC+++        
Sbjct: 354 HCAACKRGANLQPCGT--CPGAYHLSC----LEPPLKTAPKGVWVCPRCQQKALKKDEGV 407

Query: 454 PW 459
           PW
Sbjct: 408 PW 409

>HSP1_TRAJO (Q8MJS8) Sperm protamine P1|
          Length = 50

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 286 CRKRQRSPKCHTPW-CRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRR 426
           CR + RS  C     CRRR+R SCR            YR+    RCRR
Sbjct: 6   CRSQSRSRCCRPRRRCRRRRRQSCRARRRATRCCRRRYRL----RCRR 49

>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11|
          Length = 154

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 8/107 (7%)
 Frame = -1

Query: 429 ASPAPWAQ----PNAVVQASGARA*QGVAAA----HPLASPAPRGVALRAPLALPASQGV 274
           ASP+P A     P    Q+S A      AAA    HP A+P P G  + AP     SQG 
Sbjct: 7   ASPSPSAPVRSAPRPAAQSSFAAPPPRPAAAAPAYHPPAAPTPMGAPMGAP-----SQGP 61

Query: 273 ALRAREGEVVQXXXXXXXXXXXXXXXXXAPGRSDVVDTPSRAQPPLG 133
            L  +                         G S     P+ A  P G
Sbjct: 62  GLMKQMAATAGGVAIGSAVGHAVGGMFTGGGSSHAEQAPAAAAAPAG 108

>HSP1_TRAPL (Q7JHM9) Sperm protamine P1|
          Length = 50

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 286 CRKRQRSPKCHTPW-CRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRR 426
           CR + RS  C     CRRR+R SCR            YR+    RCRR
Sbjct: 6   CRSQSRSRCCRPRRRCRRRRRRSCRARRRATRCCRRRYRL----RCRR 49

>HSP1_TRAGE (Q7JHM8) Sperm protamine P1|
          Length = 50

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 286 CRKRQRSPKCHTPW-CRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRR 426
           CR + RS  C     CRRR+R SCR            YR+    RCRR
Sbjct: 6   CRSQSRSRCCRPRRRCRRRRRRSCRARRRATRCCRRRYRL----RCRR 49

>HSP1_TRAFR (Q9GKQ4) Sperm protamine P1|
          Length = 50

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 286 CRKRQRSPKCHTPW-CRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRR 426
           CR + RS  C     CRRR+R SCR            YR+    RCRR
Sbjct: 6   CRSQSRSRCCRPRRRCRRRRRRSCRARRRATRCCRRRYRL----RCRR 49

>HSP1_CYNVA (Q8WP00) Sperm protamine P1|
          Length = 46

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 415 RCRRRQRSLKCHTPWRRRCQSMSCRR 492
           RCRRR+RS +     RRR    SCRR
Sbjct: 11  RCRRRRRSCRRRRRCRRRRARRSCRR 36

>CRIM1_MOUSE (Q9JLL0) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)|
           (Fragment)
          Length = 1028

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 16/102 (15%)
 Frame = +1

Query: 190 CQSPNSRRTPSCPSCQSLNYLTLSCPKCHTL-*CRKRQRS---------PKCHTPWCRRR 339
           C  P       CP C+   Y+T+  P C  L  C  +++            C T  C+ R
Sbjct: 433 CMHPVKVPGECCPVCEEPTYITIDPPACGELSNCSLKEKDCVYGFKLDHNGCRTCQCKIR 492

Query: 340 QRM------SCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKC 447
           + +      +C  TL CP     +  +  C  C+ R R  KC
Sbjct: 493 EELCLGLKRAC--TLDCPFGFLTD--VHNCELCQCRPRPKKC 530


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,661,725
Number of Sequences: 219361
Number of extensions: 1340516
Number of successful extensions: 4973
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 4388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4908
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)