| Clone Name | bart32h03 |
|---|---|
| Clone Library Name | barley_pub |
>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)| Length = 332 Score = 36.2 bits (82), Expect = 0.067 Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 5/91 (5%) Frame = +1 Query: 298 DGSHCARHTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADGA----- 462 D +H A H AH +H A + H A A + A+H +H A A A Sbjct: 55 DDAHHAHHVADAHHAHHAHHAADAHHAHHAAD----AHHAHHAADAHHAHHAADAHHAHH 110 Query: 463 AAGSTRRRCADRAHCAERADGSHSAGRAGVA 555 AA + A AH A A +H A A A Sbjct: 111 AADAHHAHHAADAHHAHHAADAHHAHHAADA 141 Score = 34.3 bits (77), Expect = 0.26 Identities = 26/86 (30%), Positives = 33/86 (38%) Frame = +1 Query: 304 SHCARHTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADGAAAGSTRR 483 +H A H AH +H A + H A A S A+H +H A A A + Sbjct: 132 AHHAHHAADAHHAHHAADAHHAHHAAYAHHAHHASD-AHHAADAHHAAYAHHAHHAADAH 190 Query: 484 RCADRAHCAERADGSHSAGRAGVADA 561 AD H A H+A ADA Sbjct: 191 HAADAHHAAYAHHAHHAADAHHAADA 216 Score = 34.3 bits (77), Expect = 0.26 Identities = 37/165 (22%), Positives = 48/165 (29%), Gaps = 9/165 (5%) Frame = +1 Query: 88 SARAHGFH--LDELRCHGAPHGRHARHVXXXXXXXXXXXLAHTDXXXXXXXXXXXXXXXX 261 +A AH H D H A HA H H Sbjct: 75 AADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHH 134 Query: 262 XXXXXXXXXXXPDGSHCARHTDGAHSSHRARRTGNTHGARCAGGTS-----TWSRRANHP 426 +H A H AH +H A + H A A + ++ A+H Sbjct: 135 AHHAAD--------AHHAHHAADAHHAHHAAYAHHAHHASDAHHAADAHHAAYAHHAHHA 186 Query: 427 GGSHCARRADGAAAGSTRRRCADRAHCAE--RADGSHSAGRAGVA 555 +H A A AA AD H A+ A +H A A A Sbjct: 187 ADAHHAADAHHAAYAHHAHHAADAHHAADAHHATDAHHAHHAADA 231 Score = 33.9 bits (76), Expect = 0.33 Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 14/100 (14%) Frame = +1 Query: 304 SHCARHTDGAHSSHRARRTGNTHGARCAGGT--STWSRRANHPGGSHCARRADGAAAGST 477 +H A H AH +H A + H A A + ++ A+H +H A A AA Sbjct: 123 AHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAAYAHHAHHASDAHHAADAHHAAYAHH 182 Query: 478 RRRCADRAHCAER------------ADGSHSAGRAGVADA 561 AD H A+ AD H+A DA Sbjct: 183 AHHAADAHHAADAHHAAYAHHAHHAADAHHAADAHHATDA 222 Score = 30.8 bits (68), Expect = 2.8 Identities = 33/160 (20%), Positives = 41/160 (25%), Gaps = 2/160 (1%) Frame = +1 Query: 88 SARAHGFH--LDELRCHGAPHGRHARHVXXXXXXXXXXXLAHTDXXXXXXXXXXXXXXXX 261 +A AH H D H A HA H H Sbjct: 93 AADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHH 152 Query: 262 XXXXXXXXXXXPDGSHCARHTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHC 441 +H A H AH + A H A A A+H +H Sbjct: 153 AHHAAY--------AHHAHHASDAHHAADAHHAAYAHHAHHAAD-------AHHAADAHH 197 Query: 442 ARRADGAAAGSTRRRCADRAHCAERADGSHSAGRAGVADA 561 A A A + AD H + H+A DA Sbjct: 198 AAYAHHAHHAADAHHAADAHHATDAHHAHHAADAHHATDA 237 Score = 30.0 bits (66), Expect = 4.8 Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 5/84 (5%) Frame = +1 Query: 319 HTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADGA-----AAGSTRR 483 H D AH +H + H A A + A+H +H A A A AA + Sbjct: 53 HVDDAHHAHHVADAHHAHHAHHAAD----AHHAHHAADAHHAHHAADAHHAHHAADAHHA 108 Query: 484 RCADRAHCAERADGSHSAGRAGVA 555 A AH A A +H A A A Sbjct: 109 HHAADAHHAHHAADAHHAHHAADA 132
>HRP2_PLAFA (P05228) Histidine-rich protein precursor (Clone PFHRP-III)| Length = 241 Score = 34.3 bits (77), Expect = 0.26 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 2/88 (2%) Frame = +1 Query: 304 SHCARHTDGAHSSHRARRTGNTHGARCA--GGTSTWSRRANHPGGSHCARRADGAAAGST 477 +H A H AH + A N H A A + + A+H +H A A AA Sbjct: 75 AHHAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHH 134 Query: 478 RRRCADRAHCAERADGSHSAGRAGVADA 561 A+ A+ H+A ADA Sbjct: 135 AANAHHAANAHHAANAHHAANAHHAADA 162 Score = 30.4 bits (67), Expect = 3.7 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 2/88 (2%) Frame = +1 Query: 304 SHCARHTDGAHSSHRARRTGNTHGARCA--GGTSTWSRRANHPGGSHCARRADGAAAGST 477 +H A H AH +H A N H A A + + A+H +H A A AA Sbjct: 66 AHHAHHVADAHHAHHA---ANAHHAANAHHAANAHHAANAHHAANAHHAANAHHAANAHH 122 Query: 478 RRRCADRAHCAERADGSHSAGRAGVADA 561 A+ A+ H+A A+A Sbjct: 123 AANAHHAANAHHAANAHHAANAHHAANA 150
>HRP_PLAFF (P04930) Small histidine-alanine-rich protein precursor (SHARP)| (Antigen 57) Length = 221 Score = 33.5 bits (75), Expect = 0.44 Identities = 23/86 (26%), Positives = 32/86 (37%) Frame = +1 Query: 304 SHCARHTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADGAAAGSTRR 483 +H A H AH + A N H A + + A+H +H A A AA Sbjct: 66 AHHAHHAANAHHAANAHHAANAHHA----ANAHHAANAHHAANAHHAANAHHAANAHHAA 121 Query: 484 RCADRAHCAERADGSHSAGRAGVADA 561 A+ A+ H+A ADA Sbjct: 122 NAHHAANAHHAANAHHAANAHHAADA 147
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 33.5 bits (75), Expect = 0.44 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = -1 Query: 436 GNRR---DGWHGGSRYWYRRHT--WHRGYCRYAGHGGNCGRHRYAWHSGNRRDVRHGGHR 272 GNR DG++G + W++ W+RGY AG GG G + + G + +GG+ Sbjct: 231 GNRGYGGDGYNGDGQLWWQPSLLGWNRGYG--AGQGGGYGAGQGGGYGGGGQGGGYGGNG 288 Query: 271 GND 263 G D Sbjct: 289 GYD 291
>CO0XX_PONPY (Q5R9Q6) Protein C15orf0?? homolog| Length = 118 Score = 33.1 bits (74), Expect = 0.57 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Frame = -1 Query: 469 RQRHRRHAWHSGNRRDGWHGGSRYWYRRHTWHRG---YCRYAGHGGNCGRHRYAWH 311 R R R W S NR + WHG R W + HR Y + GH G R Y ++ Sbjct: 65 RGRDNRWGWPSDNRSNQWHG--RSWGNNYPQHRQEPYYPQQYGHYGYNQRPPYGYY 118
>CO0XX_HUMAN (Q9BTL3) Protein C15orf0??| Length = 118 Score = 33.1 bits (74), Expect = 0.57 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Frame = -1 Query: 469 RQRHRRHAWHSGNRRDGWHGGSRYWYRRHTWHRG---YCRYAGHGGNCGRHRYAWH 311 R R R W S NR + WHG R W + HR Y + GH G R Y ++ Sbjct: 65 RGRDNRWGWPSDNRSNQWHG--RSWGNNYPQHRQEPYYPQQYGHYGYNQRPPYGYY 118
>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane| protein) Length = 2038 Score = 32.3 bits (72), Expect = 0.97 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Frame = +1 Query: 322 TDGAHSSHRARRTGNTHGARCAG----GTSTWSRRANHPGGSHCARRADGAAAGSTRRRC 489 T G+ SS A+ G GA+ +G G S + N GG+ A G+ G Sbjct: 835 TAGSGSSKGAKSKGG-RGAKGSGAGGVGASNNAAAGNAAGGAAGAAAGAGSVGGVGGAGA 893 Query: 490 ADRAHCAERADGSHSAGRAG 549 A + ++RA GS SAG G Sbjct: 894 AGGGNASKRAKGSSSAGAGG 913
>CWC25_GIBZE (Q4IRI9) Pre-mRNA-splicing factor CWC25| Length = 393 Score = 32.0 bits (71), Expect = 1.3 Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 2/71 (2%) Frame = +1 Query: 337 SSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADGAAAGSTRRRCADR--AHCA 510 S + R H R A G RR S RR DG+ RRR D H Sbjct: 177 SRRKEDRHRRRHRHRSADGEDRHHRRRRSYSRSQSPRRRDGSREDRHRRRRDDSRDRHSR 236 Query: 511 ERADGSHSAGR 543 R DGS GR Sbjct: 237 RRRDGSDEEGR 247
>VCO7_ADE04 (Q96831) Major core protein precursor (Protein VII) (pVII)| Length = 193 Score = 32.0 bits (71), Expect = 1.3 Identities = 28/69 (40%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +1 Query: 313 ARHTDGAHSSHR--ARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRA-DGAAAGSTRR 483 AR A S R ARR +T R A +RR ARRA GA+AG TRR Sbjct: 92 ARRYARAKSRRRRIARRHRSTTAMRAARALLRRARRTGRRAMLRAARRAASGASAGRTRR 151 Query: 484 RCADRAHCA 510 R A A A Sbjct: 152 RAATAAATA 160
>PCSK7_MOUSE (Q61139) Proprotein convertase subtilisin/kexin type 7 precursor| (EC 3.4.21.-) (Proprotein convertase PC7) (Subtilisin/kexin-like protease PC7) (Prohormone convertase PC7) (Subtilisin-like proprotein convertase 7) (SPC7) Length = 770 Score = 31.2 bits (69), Expect = 2.2 Identities = 22/60 (36%), Positives = 24/60 (40%) Frame = +1 Query: 295 PDGSHCARHTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADGAAAGS 474 P+GS+ D H GN HG RCAG A P S C A G A GS Sbjct: 202 PEGSYDLNSNDPDPMPHPDEENGNHHGTRCAG------EIAAVPNNSFC---AVGVAYGS 252
>PCSK7_RAT (Q62849) Proprotein convertase subtilisin/kexin type 7 precursor| (EC 3.4.21.-) (Proprotein convertase PC7) (Subtilisin/kexin-like protease PC7) (Prohormone convertase PC7) (rPC7) Length = 783 Score = 31.2 bits (69), Expect = 2.2 Identities = 22/60 (36%), Positives = 24/60 (40%) Frame = +1 Query: 295 PDGSHCARHTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADGAAAGS 474 P+GS+ D H GN HG RCAG A P S C A G A GS Sbjct: 202 PEGSYDLNSNDPDPMPHPDEENGNHHGTRCAG------EIAAVPNNSFC---AVGVAYGS 252
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 31.2 bits (69), Expect = 2.2 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Frame = +1 Query: 304 SHCARHTDGAHSSHRARRTGNTHGARCAGG--TSTWSRRANHPGGSHCARRADGAAAGST 477 SH HS+ R+R++G H +GG S+ + + PG H +R +A S+ Sbjct: 3256 SHHEDRAGHGHSADRSRQSGTRHAETSSGGQAASSHEQARSSPGERHGSRHQQ--SADSS 3313 Query: 478 RRRCADRAHCAERADGSHSAGRAG 549 R R + S G +G Sbjct: 3314 RHSGIPRGQASSAVRDSRHWGSSG 3337 Score = 29.6 bits (65), Expect = 6.3 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Frame = +1 Query: 304 SHCARHTDGAHSSHRARRTGNTHGARCAGG--TSTWSRRANHPGGSHCARR---ADGAAA 468 SH HS+ +R++G H +GG S+ + + PG H +R AD + Sbjct: 1635 SHQEDRASHGHSAESSRQSGTRHAETSSGGQAASSQEQARSSPGERHGSRHQQSADSSTD 1694 Query: 469 GSTRRR 486 T RR Sbjct: 1695 SGTGRR 1700
>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 961 Score = 31.2 bits (69), Expect = 2.2 Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = +3 Query: 279 PPCRT--SRRFPLCQAYRWRPQFPPCPAYRQYPRCQVCRRYQYLEP-PCQPSRRFP 437 PP T R PL +A +PQ PP P+Y Q PR LEP P PSR P Sbjct: 139 PPTETPSQRPSPLKRAPGPKPQVPPKPSYLQMPRMP-----PPLEPIPPPPSRPLP 189
>ERME_SACER (P07287) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) (Erythromycin resistance protein) (NMT) Length = 370 Score = 31.2 bits (69), Expect = 2.2 Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Frame = +1 Query: 346 RARRTGNT-HGARCAGGTSTWSRRANHPGGSHCARRADGAAAGSTRRRCADRAHCAERAD 522 R RRTG HG R GG RR G H R+A G + R D ER Sbjct: 285 RGRRTGGRDHGDRRTGGQDRGDRRTG--GRDHRDRQASGHGDRRSSGRNRDDGRTGEREQ 342 Query: 523 GSHSAGRAG 549 G GR G Sbjct: 343 GD-QGGRRG 350
>LAMA3_MOUSE (Q61789) Laminin alpha-3 chain precursor (Nicein alpha subunit)| Length = 3333 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 267 FPRCPPCRTSRRFPLCQAYRWRPQFPPCPAYRQYPRCQVC 386 FP C PC RR LC+ + CP + P+C+VC Sbjct: 1304 FPYCKPCNCGRR--LCEEVTGKCL---CPPHTVRPQCEVC 1338
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 30.8 bits (68), Expect = 2.8 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 1/71 (1%) Frame = -1 Query: 460 HRRHAWHSGNRRDGWHGGSRYWYRRHTWHRGYCRYAGHGGNCGRHRYA-WHSGNRRDVRH 284 H HA H + HG + + H H + + GH + H A H + D H Sbjct: 209 HHHHAPHHHHHHH--HGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHH 266 Query: 283 GGHRGNDAAWH 251 H +DA H Sbjct: 267 HHHHHHDAHHH 277
>CAC1B_DISOM (P56698) Probable voltage-dependent N-type calcium channel alpha-1B| subunit (Voltage-gated calcium channel alpha subunit Cav2.2) (DOE-4) Length = 2326 Score = 30.8 bits (68), Expect = 2.8 Identities = 20/72 (27%), Positives = 26/72 (36%) Frame = +1 Query: 307 HCARHTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADGAAAGSTRRR 486 H D A R + HG T R AN G +R DG+ +G Sbjct: 914 HAQSSLDDAPEREHRRHRSHRHG------TEQQHREANGTKGERHSRAKDGSRSGGREGE 967 Query: 487 CADRAHCAERAD 522 R+H AE A+ Sbjct: 968 AVSRSHHAEGAE 979
>IBP2_CHICK (P49705) Insulin-like growth factor-binding protein 2 precursor| (IGFBP-2) (IBP-2) (IGF-binding protein 2) Length = 311 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +3 Query: 273 RCPPCRTSRRFPLCQAYRWRPQFPPCPAYRQYPRCQVC 386 RCPPC R A R PPCP + P C C Sbjct: 41 RCPPCTAERLAACSPAAR-----PPCPELVREPGCGCC 73
>CSP_PLASI (Q03110) Circumsporozoite protein precursor (CS)| Length = 386 Score = 30.0 bits (66), Expect = 4.8 Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 1/84 (1%) Frame = +1 Query: 298 DGSHCARHTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADG-AAAGS 474 DG DG + RA G G R A G R P G A + G AAG Sbjct: 127 DGQPAGDRADGQPAGDRA--AGQPAGDR-ADGQPAGDRADGQPAGDRAAGQPAGDRAAGQ 183 Query: 475 TRRRCADRAHCAERADGSHSAGRA 546 AD +RADG + RA Sbjct: 184 PAGDRADGQPAGDRADGQPAGDRA 207
>PCSK7_HUMAN (Q16549) Proprotein convertase subtilisin/kexin type 7 precursor| (EC 3.4.21.-) (Proprotein convertase PC7) (Subtilisin/kexin-like protease PC7) (Prohormone convertase PC7) (PC8) (hPC8) (Lymphoma proprotein convertase) Length = 785 Score = 30.0 bits (66), Expect = 4.8 Identities = 22/60 (36%), Positives = 24/60 (40%) Frame = +1 Query: 295 PDGSHCARHTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADGAAAGS 474 P+GS+ D H GN HG RCAG A P S C A G A GS Sbjct: 203 PEGSYDLNSNDPDPMPHPDVENGNHHGTRCAG------EIAAVPNNSFC---AVGVAYGS 253
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 30.0 bits (66), Expect = 4.8 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Frame = -1 Query: 442 HSGNRRDG-WHGGSRYWYRRHTWHRGYCRYAGHGGNCGRHRYAWHSGNRRDVRHGGHRGN 266 + G RRDG + GG Y RR GY G+GG RR+ GG+ G Sbjct: 105 YGGGRRDGGYGGGGGYGGRREGGGGGYGGGGGYGG-------------RREGGGGGYGGG 151 Query: 265 DAAW 254 W Sbjct: 152 GGGW 155
>CATLL_FASHE (Q24940) Cathepsin L-like proteinase precursor (EC 3.4.22.-)| Length = 326 Score = 29.6 bits (65), Expect = 6.3 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%) Frame = -1 Query: 421 GWHGGSRYWYRRHTW-----HRGYCRYAGHGGN-CG 332 G GG+ YW +++W RGY R A + GN CG Sbjct: 277 GTQGGTDYWIVKNSWGTYWGERGYIRMARNRGNMCG 312
>VP13B_MOUSE (Q80TY5) Vacuolar protein sorting 13B (Cohen syndrome protein 1| homolog) (Fragment) Length = 1603 Score = 29.6 bits (65), Expect = 6.3 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 5/44 (11%) Frame = -3 Query: 449 RLAQWEPPGWLARRLQVLVPPAH-----LAPWVLPVRRARWELW 333 +L+QW+ P + +L + P L PW L + +++W+LW Sbjct: 542 QLSQWDSP--MRVKLSIWKPYVRTLLIELLPWALLINQSKWDLW 583
>PI5K5_ARATH (Q9SLG9) Phosphatidylinositol-4-phosphate 5-kinase 5 (EC 2.7.1.68)| (AtPIP5K5) (1-phosphatidylinositol-4-phosphate kinase 5) (PtdIns(4)P-5-kinase 5) (Diphosphoinositide kinase 5) Length = 772 Score = 29.6 bits (65), Expect = 6.3 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = -1 Query: 460 HRRHAWHSGNRRDG-WHGGSRYWYRRHTWHRG--YCRYAGHGGNCGRHRYAWHSGNRRD 293 H ++ +G+ DG W G + ++ W G Y +G CG+ + W +GNR D Sbjct: 156 HGVKSFANGDAYDGEWRRGLQEGQGKYQWSDGSYYIGEWKNGTICGKGSFVWTNGNRYD 214
>SAX1_CHICK (P19601) Homeobox protein SAX-1 (CHOX-3) (Fragment)| Length = 232 Score = 29.3 bits (64), Expect = 8.2 Identities = 20/60 (33%), Positives = 22/60 (36%) Frame = +1 Query: 382 CAGGTSTWSRRANHPGGSHCARRADGAAAGSTRRRCADRAHCAERADGSHSAGRAGVADA 561 C + SRR HPGG G AA RR A GS GR A+A Sbjct: 1 CLPDPAALSRRCTHPGGERRGGSGRGGAASGRRRVRFVSAVPGPEEPGSPRGGRRRRAEA 60
>DFRC_MOUSE (P17533) Defensin-related sequence cryptdin peptide precursor| (Cryptdin-related protein 1C) (CRS1C) Length = 116 Score = 29.3 bits (64), Expect = 8.2 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +3 Query: 267 FPRCPPCRTSRRFPLCQAYRWRPQFPPCPAYRQYPRCQVCRRYQ 398 FP C CR ++ +CQ + P CP Q P+ +C Q Sbjct: 62 FPWCRKCRVCQKCQVCQ------KCPVCPTCPQCPKQPLCEERQ 99
>VP13B_HUMAN (Q7Z7G8) Vacuolar protein sorting 13B (Cohen syndrome protein 1)| Length = 4022 Score = 29.3 bits (64), Expect = 8.2 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 5/44 (11%) Frame = -3 Query: 449 RLAQWEPPGWLARRLQVLVPPAH-----LAPWVLPVRRARWELW 333 +L+QW+ P + +L + P L PW L + ++W+LW Sbjct: 2959 QLSQWDSP--MRVKLSIWKPYVRTLLIELLPWALLINESKWDLW 3000
>DFR10_MOUSE (Q64263) Defensin-related cryptdin, related sequence 10 precursor| (Cryptdin-related protein 4C-4) (CRS4C) Length = 91 Score = 29.3 bits (64), Expect = 8.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +3 Query: 276 CPPCRTSRRFPLCQAYRWRPQFPPCPAYRQYPR 374 CPPC P C + W P P CP+ + P+ Sbjct: 65 CPPC------PSCPSCPWCPMCPRCPSCKCNPK 91
>DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence 7 precursor| (Cryptdin-related protein 4C-2) (CRS4C) Length = 91 Score = 29.3 bits (64), Expect = 8.2 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +3 Query: 270 PRCPPCRTSRRFPLCQAYRWRPQFPPCPAYRQYPR 374 PRCPPC P C W P+ P CP P+ Sbjct: 66 PRCPPC------PRCS---WCPRCPTCPRCNCNPK 91
>CYC5_PSEME (P00121) Cytochrome c5| Length = 87 Score = 29.3 bits (64), Expect = 8.2 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Frame = +1 Query: 313 ARHTDGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGG--SHCARRADGAAAGSTRRR 486 A+H + H + GA G T+ W RA+H GG A+ G A + Sbjct: 16 AKHCNACHGA-------GVLGAPKIGDTAAWKERADHQGGLDGILAKAISGINAMPPKGT 68 Query: 487 CAD 495 CAD Sbjct: 69 CAD 71
>FBRL_HUMAN (P22087) Fibrillarin (34 kDa nucleolar scleroderma antigen)| Length = 321 Score = 29.3 bits (64), Expect = 8.2 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = -1 Query: 352 GHGGNCGRHRYAWHSGNRRDVRHGGHRGNDA 260 G GG GR +HSG R GG RGN + Sbjct: 52 GGGGGGGRGGGGFHSGGNRGRGRGGKRGNQS 82
>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2505 Score = 29.3 bits (64), Expect = 8.2 Identities = 18/49 (36%), Positives = 19/49 (38%) Frame = +1 Query: 325 DGAHSSHRARRTGNTHGARCAGGTSTWSRRANHPGGSHCARRADGAAAG 471 DG H HRA R G RRA H GS AR +G G Sbjct: 953 DGEHRRHRAHRRPGEEGPE-----DKAERRARHREGSRPARGGEGEGEG 996 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,201,815 Number of Sequences: 219361 Number of extensions: 1285904 Number of successful extensions: 4522 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4053 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4443 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)