| Clone Name | bart32a06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 636 bits (321), Expect = e-179 Identities = 402/429 (93%) Strand = Plus / Minus Query: 105 cggcgatggcgtccacggcggcgaggcggctcagggagctgcaggggcagccggggaaca 164 ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 9430818 cggcgatggcgtcgacggcggcgaggcggctacgggagctgcaggggcaggcggggaaca 9430759 Query: 165 agacgtgcgtcgactgcgcgcagaggaacccgcagtgggccagcgtctcctacggcgtct 224 |||||||||| |||||||||||| |||||||||||||||| |||||||| ||||| || | Sbjct: 9430758 agacgtgcgtggactgcgcgcagcggaacccgcagtgggcgagcgtctcgtacggggtgt 9430699 Query: 225 tcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtcc 284 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 9430698 tcatgtgcctcgagtgctcgggcaagcaccgggggctcggcgtgcacatcagcttcgtcc 9430639 Query: 285 gctccgtcaccatggactcctggaccgagccgcagctccgcaagatggaggccgggggca 344 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| Sbjct: 9430638 gctccgtcaccatggactcgtggaccgaggcgcagctccgcaagatggaggccggcggca 9430579 Query: 345 acgaccgcctcaacgccttcctcgccgcgcggggcgtgcccaaggagacgccccacatcc 404 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 9430578 acgaccgcctcaacgccttcctcgccgcgcggggcgtgcccaaggagaccccccacgtcg 9430519 Query: 405 ccaagtacaactccaacgccgccgccgcataccgcgaccgcatcatcgccctcgccgagg 464 |||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 9430518 ccaagtacaactccaacgccgccgccgcgtaccgcgaccgcatcgtcgccgtcgccgagg 9430459 Query: 465 gccgcgcctggaccgacccgcccgtcgttaaggagacgcccggatctgccgcgcccgccc 524 ||||| | |||||||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 9430458 gccgcccgtggaccgacccgcccgtcgtgaaggagacccccggatctggcgcgcccgccc 9430399 Query: 525 ccgccagga 533 || |||||| Sbjct: 9430398 ccaccagga 9430390
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 636 bits (321), Expect = e-179 Identities = 402/429 (93%) Strand = Plus / Minus Query: 105 cggcgatggcgtccacggcggcgaggcggctcagggagctgcaggggcagccggggaaca 164 ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 128218 cggcgatggcgtcgacggcggcgaggcggctacgggagctgcaggggcaggcggggaaca 128159 Query: 165 agacgtgcgtcgactgcgcgcagaggaacccgcagtgggccagcgtctcctacggcgtct 224 |||||||||| |||||||||||| |||||||||||||||| |||||||| ||||| || | Sbjct: 128158 agacgtgcgtggactgcgcgcagcggaacccgcagtgggcgagcgtctcgtacggggtgt 128099 Query: 225 tcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtcc 284 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 128098 tcatgtgcctcgagtgctcgggcaagcaccgggggctcggcgtgcacatcagcttcgtcc 128039 Query: 285 gctccgtcaccatggactcctggaccgagccgcagctccgcaagatggaggccgggggca 344 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| Sbjct: 128038 gctccgtcaccatggactcgtggaccgaggcgcagctccgcaagatggaggccggcggca 127979 Query: 345 acgaccgcctcaacgccttcctcgccgcgcggggcgtgcccaaggagacgccccacatcc 404 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 127978 acgaccgcctcaacgccttcctcgccgcgcggggcgtgcccaaggagaccccccacgtcg 127919 Query: 405 ccaagtacaactccaacgccgccgccgcataccgcgaccgcatcatcgccctcgccgagg 464 |||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 127918 ccaagtacaactccaacgccgccgccgcgtaccgcgaccgcatcgtcgccgtcgccgagg 127859 Query: 465 gccgcgcctggaccgacccgcccgtcgttaaggagacgcccggatctgccgcgcccgccc 524 ||||| | |||||||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 127858 gccgcccgtggaccgacccgcccgtcgtgaaggagacccccggatctggcgcgcccgccc 127799 Query: 525 ccgccagga 533 || |||||| Sbjct: 127798 ccaccagga 127790
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 636 bits (321), Expect = e-179 Identities = 402/429 (93%) Strand = Plus / Minus Query: 105 cggcgatggcgtccacggcggcgaggcggctcagggagctgcaggggcagccggggaaca 164 ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 9428939 cggcgatggcgtcgacggcggcgaggcggctacgggagctgcaggggcaggcggggaaca 9428880 Query: 165 agacgtgcgtcgactgcgcgcagaggaacccgcagtgggccagcgtctcctacggcgtct 224 |||||||||| |||||||||||| |||||||||||||||| |||||||| ||||| || | Sbjct: 9428879 agacgtgcgtggactgcgcgcagcggaacccgcagtgggcgagcgtctcgtacggggtgt 9428820 Query: 225 tcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtcc 284 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 9428819 tcatgtgcctcgagtgctcgggcaagcaccgggggctcggcgtgcacatcagcttcgtcc 9428760 Query: 285 gctccgtcaccatggactcctggaccgagccgcagctccgcaagatggaggccgggggca 344 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| Sbjct: 9428759 gctccgtcaccatggactcgtggaccgaggcgcagctccgcaagatggaggccggcggca 9428700 Query: 345 acgaccgcctcaacgccttcctcgccgcgcggggcgtgcccaaggagacgccccacatcc 404 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 9428699 acgaccgcctcaacgccttcctcgccgcgcggggcgtgcccaaggagaccccccacgtcg 9428640 Query: 405 ccaagtacaactccaacgccgccgccgcataccgcgaccgcatcatcgccctcgccgagg 464 |||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 9428639 ccaagtacaactccaacgccgccgccgcgtaccgcgaccgcatcgtcgccgtcgccgagg 9428580 Query: 465 gccgcgcctggaccgacccgcccgtcgttaaggagacgcccggatctgccgcgcccgccc 524 ||||| | |||||||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 9428579 gccgcccgtggaccgacccgcccgtcgtgaaggagacccccggatctggcgcgcccgccc 9428520 Query: 525 ccgccagga 533 || |||||| Sbjct: 9428519 ccaccagga 9428511
>dbj|AK070052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040P09, full insert sequence Length = 1888 Score = 636 bits (321), Expect = e-179 Identities = 402/429 (93%) Strand = Plus / Plus Query: 105 cggcgatggcgtccacggcggcgaggcggctcagggagctgcaggggcagccggggaaca 164 ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 12 cggcgatggcgtcgacggcggcgaggcggctacgggagctgcaggggcaggcggggaaca 71 Query: 165 agacgtgcgtcgactgcgcgcagaggaacccgcagtgggccagcgtctcctacggcgtct 224 |||||||||| |||||||||||| |||||||||||||||| |||||||| ||||| || | Sbjct: 72 agacgtgcgtggactgcgcgcagcggaacccgcagtgggcgagcgtctcgtacggggtgt 131 Query: 225 tcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtcc 284 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 132 tcatgtgcctcgagtgctcgggcaagcaccgggggctcggcgtgcacatcagcttcgtcc 191 Query: 285 gctccgtcaccatggactcctggaccgagccgcagctccgcaagatggaggccgggggca 344 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| Sbjct: 192 gctccgtcaccatggactcgtggaccgaggcgcagctccgcaagatggaggccggcggca 251 Query: 345 acgaccgcctcaacgccttcctcgccgcgcggggcgtgcccaaggagacgccccacatcc 404 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 252 acgaccgcctcaacgccttcctcgccgcgcggggcgtgcccaaggagaccccccacgtcg 311 Query: 405 ccaagtacaactccaacgccgccgccgcataccgcgaccgcatcatcgccctcgccgagg 464 |||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 312 ccaagtacaactccaacgccgccgccgcgtaccgcgaccgcatcgtcgccgtcgccgagg 371 Query: 465 gccgcgcctggaccgacccgcccgtcgttaaggagacgcccggatctgccgcgcccgccc 524 ||||| | |||||||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 372 gccgcccgtggaccgacccgcccgtcgtgaaggagacccccggatctggcgcgcccgccc 431 Query: 525 ccgccagga 533 || |||||| Sbjct: 432 ccaccagga 440
>gb|AY596524.1| Saccharum officinarum clone SCCCLR1079D12, complete sequence Length = 1757 Score = 563 bits (284), Expect = e-157 Identities = 408/448 (91%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 91 cgcagatccggacccggcgatggcgtccacggcggcgaggcggctcagggagctgcaggg 150 |||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 66 cgcagatccg-atccggcgatggcgtccacggcggcgaggcggctgcgggagctgcaggc 124 Query: 151 gcagccggggaacaagacgtgcgtcgactgcgcgcagaggaacccgcagtgggccagcgt 210 |||| ||||||||||||| ||||| |||||||||||| |||||||||||||||| ||||| Sbjct: 125 gcagacggggaacaagacctgcgtggactgcgcgcagcggaacccgcagtgggcgagcgt 184 Query: 211 ctcctacggcgtcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgca 270 ||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 185 ctcctacggggtgttcatgtgcctcgagtgctcgggcaagcaccggggcctcggcgtgca 244 Query: 271 catcagcttcgtccgctccgtcaccatggactcctggaccgagccgcagctccgcaagat 330 |||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 245 catcagcttcgtgcgctcggtcaccatggactcctggaccgaggcgcagctccgcaagat 304 Query: 331 ggaggccgggggcaacgaccgcctcaacgccttcctcgccgcgcggggcgtgcccaagga 390 ||||| ||| ||||||||||||||||||||||||||| | ||||| ||||| |||||||| Sbjct: 305 ggagggcggcggcaacgaccgcctcaacgccttcctcacagcgcgcggcgtccccaagga 364 Query: 391 gacgccccacatccccaagtacaactccaacgccgccgccgcataccgcgaccgcatcat 450 |||||||||| || |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 365 gacgccccacgtcgccaagtacaactccaacgccgccgccgcctaccgcgaccgcatcgc 424 Query: 451 cgccctcgccgagggccgcgcctggaccgacccgcccgtcgttaaggagacgcccggatc 510 ||| ||||| |||||| | ||||||||||||||||| || ||||||||||||||||| Sbjct: 425 cgcgctcgctgagggcaagccgtggaccgacccgcccgtagtcaaggagacgcccggatc 484 Query: 511 tgccgcgcccgcccccgccaggaggccg 538 || |||||||||||| || |||| |||| Sbjct: 485 tggcgcgcccgcccctgctaggaagccg 512
>gb|AY108499.1| Zea mays PCO089227 mRNA sequence Length = 875 Score = 478 bits (241), Expect = e-131 Identities = 399/448 (89%), Gaps = 3/448 (0%) Strand = Plus / Plus Query: 91 cgcagatccggacccggcgatggcgtccacggcggcgaggcggctcagggagctgcaggg 150 |||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99 cgcagatccg-atccggcgatggcgtccacggcggcgaggcggctgcgggagctgcaggc 157 Query: 151 gcagccggggaacaagacgtgcgtcgactgcgcgcagaggaacccgcagtgggccagcgt 210 |||| ||||||||||||| ||||| |||||||||||| | ||||||||||||| ||||| Sbjct: 158 gcagacggggaacaagacctgcgtggactgcgcgcag-ganacccgcagtgggcgagcgt 216 Query: 211 ctcctacggcgtcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgca 270 |||||| || || |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 217 ctcctatggggtgttcatgtgcctcgagtgctcgggcaagcaccggggcctcggcgtgca 276 Query: 271 catcagcttcgtccgctccgtcaccatggactcctggaccgagccgcagctccgcaagat 330 |||||||||||| ||||| |||||||||||||||||||||||| |||| ||||||||||| Sbjct: 277 catcagcttcgtgcgctcggtcaccatggactcctggaccgaggcgca-ctccgcaagat 335 Query: 331 ggaggccgggggcaacgaccgcctcaacgccttcctcgccgcgcggggcgtgcccaagga 390 ||||||||| ||||||||||| ||||||||||||||| | || || ||||| || ||||| Sbjct: 336 ggaggccggtggcaacgaccgactcaacgccttcctcacagctcgcggcgttcctaagga 395 Query: 391 gacgccccacatccccaagtacaactccaacgccgccgccgcataccgcgaccgcatcat 450 |||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 396 gacgccccacgtcgccaagtacaactccaacgccgcagccgcctaccgcgaccgcatcgc 455 Query: 451 cgccctcgccgagggccgcgcctggaccgacccgcccgtcgttaaggagacgcccggatc 510 ||| ||||| ||||| | ||||| ||||||||||| || ||||||||||||||||| Sbjct: 456 cgcgctcgctgagggaaagccgtggactgacccgcccgtggtcaaggagacgcccggatc 515 Query: 511 tgccgcgcccgcccccgccaggaggccg 538 || ||| ||||||||||| |||| |||| Sbjct: 516 tggcgcccccgcccccgctaggaagccg 543
>dbj|AB236834.1| Trifolium pratense RNA for putative Asp1, complete cds, clone: C247 Length = 1922 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 212 tcctacggcgtcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcac 271 ||||||||| ||||||||||||| || ||||||||||| ||||| |||||||| || ||| Sbjct: 149 tcctacggcatcttcatgtgcctggaatgctccggcaaacaccgtggcctcggggttcac 208 Query: 272 atcagcttcgtccgctccgtcaccatgga 300 || |||||| || |||||||||||||| Sbjct: 209 atatccttcgtacgatccgtcaccatgga 237
>dbj|AB236740.1| Trifolium pratense RNA for putative Asp1, complete cds, clone: C1062 Length = 1922 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 212 tcctacggcgtcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcac 271 ||||||||| ||||||||||||| || ||||||||||| ||||| |||||||| || ||| Sbjct: 149 tcctacggcatcttcatgtgcctggaatgctccggcaaacaccgtggcctcggggttcac 208 Query: 272 atcagcttcgtccgctccgtcaccatgga 300 || |||||| || |||||||||||||| Sbjct: 209 atatccttcgtacgatccgtcaccatgga 237
>gb|AC148343.2| Medicago truncatula chromosome 7 BAC clone mth2-70c24, complete sequence Length = 87311 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 212 tcctacggcgtcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcac 271 ||||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 44920 tcctacggcgttttcatgtgtctcgaatgctccggcaaacaccgtggcctcggcgttcac 44861 Query: 272 atcagcttcgtccgctccgtcaccatgga 300 ||| |||||||| ||||| || ||||| Sbjct: 44860 atctctttcgtccgatccgttacaatgga 44832
>gb|BC085678.1| Danio rerio zgc:92804, mRNA (cDNA clone MGC:92804 IMAGE:7089038), complete cds Length = 2246 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 239 tgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtccgctccgtcaccatg 298 ||||||||||| ||| | |||||||| || ||| |||| ||||||||||||||| ||||| Sbjct: 350 tgctccggcaaacacagaggcctcggtgtccacctcagtttcgtccgctccgtctccatg 409 Query: 299 gac 301 ||| Sbjct: 410 gac 412
>ref|NM_001007303.1| Danio rerio zgc:92804 (zgc:92804), mRNA Length = 2246 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 239 tgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtccgctccgtcaccatg 298 ||||||||||| ||| | |||||||| || ||| |||| ||||||||||||||| ||||| Sbjct: 350 tgctccggcaaacacagaggcctcggtgtccacctcagtttcgtccgctccgtctccatg 409 Query: 299 gac 301 ||| Sbjct: 410 gac 412
>ref|XM_962642.1| PREDICTED: Tribolium castaneum similar to CG4237-PA (LOC656091), mRNA Length = 1296 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 233 ctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtccgctccgtc 292 |||||||||||||||||||||||||| || || |||||| | ||||||||||| ||| Sbjct: 127 ctcgagtgctccggcaagcaccgggggctgggggtgcacttgtctttcgtccgctcggtc 186 Query: 293 accatggac 301 || |||||| Sbjct: 187 acgatggac 195
>ref|XM_876164.1| PREDICTED: Bos taurus similar to ADP-ribosylation factor GTPase activating protein 1 isoform b, transcript variant 5 (LOC506471), mRNA Length = 1618 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 230 tgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtccgctcc 289 ||||| |||||||| || |||||||| || || || || ||| |||||||||||||||| Sbjct: 252 tgcctggagtgctcggggaagcaccgtgggcttggggttcacctcagcttcgtccgctct 311 Query: 290 gtcaccatggac 301 ||||| |||||| Sbjct: 312 gtcacgatggac 323
>ref|XM_582920.2| PREDICTED: Bos taurus similar to ADP-ribosylation factor GTPase activating protein 1 isoform b, transcript variant 1 (LOC506471), mRNA Length = 1588 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 230 tgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtccgctcc 289 ||||| |||||||| || |||||||| || || || || ||| |||||||||||||||| Sbjct: 252 tgcctggagtgctcggggaagcaccgtgggcttggggttcacctcagcttcgtccgctct 311 Query: 290 gtcaccatggac 301 ||||| |||||| Sbjct: 312 gtcacgatggac 323
>ref|XM_876027.1| PREDICTED: Bos taurus similar to ADP-ribosylation factor GTPase activating protein 1 isoform b, transcript variant 4 (LOC506471), mRNA Length = 1678 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 230 tgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtccgctcc 289 ||||| |||||||| || |||||||| || || || || ||| |||||||||||||||| Sbjct: 252 tgcctggagtgctcggggaagcaccgtgggcttggggttcacctcagcttcgtccgctct 311 Query: 290 gtcaccatggac 301 ||||| |||||| Sbjct: 312 gtcacgatggac 323
>ref|XM_875959.1| PREDICTED: Bos taurus similar to ADP-ribosylation factor GTPase activating protein 1 isoform b, transcript variant 3 (LOC506471), mRNA Length = 1074 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 230 tgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtccgctcc 289 ||||| |||||||| || |||||||| || || || || ||| |||||||||||||||| Sbjct: 238 tgcctggagtgctcggggaagcaccgtgggcttggggttcacctcagcttcgtccgctct 297 Query: 290 gtcaccatggac 301 ||||| |||||| Sbjct: 298 gtcacgatggac 309
>ref|XM_865367.1| PREDICTED: Bos taurus similar to ADP-ribosylation factor GTPase activating protein 1 isoform b, transcript variant 2 (LOC506471), mRNA Length = 1654 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 230 tgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcgtccgctcc 289 ||||| |||||||| || |||||||| || || || || ||| |||||||||||||||| Sbjct: 252 tgcctggagtgctcggggaagcaccgtgggcttggggttcacctcagcttcgtccgctct 311 Query: 290 gtcaccatggac 301 ||||| |||||| Sbjct: 312 gtcacgatggac 323
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 22 cctcctccaccacctccttccacccctc 49 ||||||||||||||||| |||||||||| Sbjct: 8327 cctcctccaccacctccctccacccctc 8300
>gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromosome 5 BAC, complete sequence Length = 86190 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 22 cctcctccaccacctccttccacccctc 49 ||||||||||||||||| |||||||||| Sbjct: 34030 cctcctccaccacctccctccacccctc 34003
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 22 cctcctccaccacctccttccacccctc 49 ||||||||||||||||| |||||||||| Sbjct: 346680 cctcctccaccacctccctccacccctc 346653
>dbj|D13898.1|STMBLAY59 Streptomyces fradiae bla gene for beta-lactamase, complete cds Length = 2195 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 358 cgccttcctcgccgcgcggggcgtgccc 385 |||||||||||||||||||||| ||||| Sbjct: 2056 cgccttcctcgccgcgcggggcctgccc 2083
>dbj|AB027763.1| Streptomyces fradiae gene, partial cds Length = 6573 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 358 cgccttcctcgccgcgcggggcgtgccc 385 |||||||||||||||||||||| ||||| Sbjct: 6434 cgccttcctcgccgcgcggggcctgccc 6461
>dbj|AB024056.1| Streptomyces fradiae gene for beta-lactamase and regulator protein, complete cds Length = 5973 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 358 cgccttcctcgccgcgcggggcgtgccc 385 |||||||||||||||||||||| ||||| Sbjct: 5834 cgccttcctcgccgcgcggggcctgccc 5861
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 233 ctcgagtgctccggcaagcacc 254 |||||||||||||||||||||| Sbjct: 3085620 ctcgagtgctccggcaagcacc 3085641
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 233 ctcgagtgctccggcaagcacc 254 |||||||||||||||||||||| Sbjct: 229946 ctcgagtgctccggcaagcacc 229967
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 atcagcttcgtccgctccgtca 293 |||||||||||||||||||||| Sbjct: 94330 atcagcttcgtccgctccgtca 94351
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 233 ctcgagtgctccggcaagcacc 254 |||||||||||||||||||||| Sbjct: 317861 ctcgagtgctccggcaagcacc 317882
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 cggcgatggcgtccacggcggc 126 |||||||||||||||||||||| Sbjct: 80004 cggcgatggcgtccacggcggc 80025
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 455 ctcgccgagggccgcgcctgga 476 |||||||||||||||||||||| Sbjct: 59326 ctcgccgagggccgcgcctgga 59347
>ref|NM_139260.1| Rattus norvegicus interleukin 3 receptor, alpha chain (Il3ra), mRNA Length = 918 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 513 ccgcgcccgcccccgccaggag 534 |||||||||||||||||||||| Sbjct: 691 ccgcgcccgcccccgccaggag 670
>gb|AF030243.1|AF030243 Rattus norvegicus cytokine receptor-like protein CYRL mRNA, complete cds Length = 918 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 513 ccgcgcccgcccccgccaggag 534 |||||||||||||||||||||| Sbjct: 691 ccgcgcccgcccccgccaggag 670
>ref|XM_316505.2| Anopheles gambiae str. PEST ENSANGP00000024029 (ENSANGG00000003389), partial mRNA Length = 1532 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 233 ctcgagtgctccggcaagcaccggggcctcggcgtgca 270 ||||||||||| ||||||||||| || ||||| ||||| Sbjct: 204 ctcgagtgctcgggcaagcaccgcggtctcggtgtgca 241
>ref|XM_316504.2| Anopheles gambiae str. PEST ENSANGP00000004294 (ENSANGG00000003389), partial mRNA Length = 1397 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 233 ctcgagtgctccggcaagcaccggggcctcggcgtgca 270 ||||||||||| ||||||||||| || ||||| ||||| Sbjct: 567 ctcgagtgctcgggcaagcaccgcggtctcggtgtgca 604
>emb|AL606906.18| Mouse DNA sequence from clone RP23-121J14 on chromosome 4, complete sequence Length = 198772 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 20 gccctcctccaccacctccttccacccctc 49 |||||||||| || |||||||||||||||| Sbjct: 97086 gccctcctcctcctcctccttccacccctc 97115
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 cggcggcgaggcggctcaggg 140 ||||||||||||||||||||| Sbjct: 865719 cggcggcgaggcggctcaggg 865699
>emb|CR762415.10| Zebrafish DNA sequence from clone CH211-39K23 in linkage group 1, complete sequence Length = 179253 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ccctcctccaccacctccttc 41 ||||||||||||||||||||| Sbjct: 21373 ccctcctccaccacctccttc 21393
>gb|AC164433.4| Mus musculus BAC clone RP23-357G5 from chromosome 14, complete sequence Length = 190748 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cctcctccaccacctccttcc 42 ||||||||||||||||||||| Sbjct: 64462 cctcctccaccacctccttcc 64442
>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145 biosynthetic gene cluster, complete sequence Length = 126933 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 gcctcaacgccttcctcgccg 371 ||||||||||||||||||||| Sbjct: 3798 gcctcaacgccttcctcgccg 3778
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 tcgccctcgccgagggccgcg 470 ||||||||||||||||||||| Sbjct: 121402 tcgccctcgccgagggccgcg 121422
>gb|AC022154.4| Homo sapiens chromosome 19 clone LLNLR-253H3, complete sequence Length = 38149 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccctcctccaccacctccttccacc 45 ||||||||||||| ||||||||||| Sbjct: 3292 ccctcctccaccatctccttccacc 3268
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 cggcgtcttcatgtgcctcga 237 ||||||||||||||||||||| Sbjct: 93405 cggcgtcttcatgtgcctcga 93425
>ref|NM_078510.2| Drosophila melanogaster Minichromosome maintenance 6 CG4039-RA (Mcm6), mRNA Length = 2784 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 cggcgtcttcatgtgcctcga 237 ||||||||||||||||||||| Sbjct: 558 cggcgtcttcatgtgcctcga 578
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 tcaacgccttcctcgccgcgc 374 ||||||||||||||||||||| Sbjct: 1741732 tcaacgccttcctcgccgcgc 1741752
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 104 ccggcgatggcgtccacggcggcga 128 |||||||||||| |||||||||||| Sbjct: 3788994 ccggcgatggcgaccacggcggcga 3788970
>gb|AC008403.8| Homo sapiens chromosome 19 clone CTC-273B12, complete sequence Length = 190076 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccctcctccaccacctccttccacc 45 ||||||||||||| ||||||||||| Sbjct: 185340 ccctcctccaccatctccttccacc 185316
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 tcgccctcgccgagggccgcg 470 ||||||||||||||||||||| Sbjct: 5714390 tcgccctcgccgagggccgcg 5714370
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 cgccctcgccgagggccgcgc 471 ||||||||||||||||||||| Sbjct: 154479 cgccctcgccgagggccgcgc 154499
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 cgccctcgccgagggccgcgc 471 ||||||||||||||||||||| Sbjct: 154479 cgccctcgccgagggccgcgc 154499
>emb|CT485668.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 100390 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 397 ccacatccccaagtacaactccaac 421 |||||||||||||||||||| |||| Sbjct: 41868 ccacatccccaagtacaactacaac 41892
>gb|AF124744.1|AF124744 Drosophila melanogaster DNA replication factor MCM6 (Mcm6) mRNA, complete cds Length = 2743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 cggcgtcttcatgtgcctcga 237 ||||||||||||||||||||| Sbjct: 498 cggcgtcttcatgtgcctcga 518
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 cggcgtcttcatgtgcctcga 237 ||||||||||||||||||||| Sbjct: 135292 cggcgtcttcatgtgcctcga 135312
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 104 ccggcgatggcgtccacggcggcga 128 |||||||||||| |||||||||||| Sbjct: 3788968 ccggcgatggcgaccacggcggcga 3788944
>emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0010K22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 92728 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 104 ccggcgatggcgtccacggcggcga 128 |||||||||||| |||||||||||| Sbjct: 51051 ccggcgatggcgaccacggcggcga 51075
>dbj|AB010108.1| Drosophila melanogaster mRNA for MCM6, complete cds Length = 2715 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 cggcgtcttcatgtgcctcga 237 ||||||||||||||||||||| Sbjct: 486 cggcgtcttcatgtgcctcga 506
>ref|NM_001036426.1| Arabidopsis thaliana ASP1 (PDE1 SUPPRESSOR 1); DNA binding AT2G37550 (ASP1) transcript variant AT2G37550.2 mRNA, complete cds Length = 1796 Score = 40.1 bits (20), Expect = 7.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 222 tcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcg 281 ||||||||||| | || |||||||| |||||||| || | || || |||||| |||| Sbjct: 182 tcttcatgtgcttggaatgctccggtaagcaccgtggtttaggtgttcacatctcattcg 241 Query: 282 tccgctccgtcaccatggactcctggaccgag 313 || | |||||||||||||| || ||| ||||| Sbjct: 242 tcagatccgtcaccatggattcatggtccgag 273
>ref|NM_129310.2| Arabidopsis thaliana ASP1 (PDE1 SUPPRESSOR 1); DNA binding AT2G37550 (ASP1) transcript variant AT2G37550.1 mRNA, complete cds Length = 1882 Score = 40.1 bits (20), Expect = 7.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 222 tcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcg 281 ||||||||||| | || |||||||| |||||||| || | || || |||||| |||| Sbjct: 252 tcttcatgtgcttggaatgctccggtaagcaccgtggtttaggtgttcacatctcattcg 311 Query: 282 tccgctccgtcaccatggactcctggaccgag 313 || | |||||||||||||| || ||| ||||| Sbjct: 312 tcagatccgtcaccatggattcatggtccgag 343
>ref|NM_201405.1| Mus musculus butyrophilin-like 1 (Btnl1), mRNA Length = 3571 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 cctcctccaccacctccttccacccctc 49 |||||||| || |||||||||||||||| Sbjct: 2630 cctcctccccctcctccttccacccctc 2657
>ref|XM_460209.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E22022g) partial mRNA Length = 4350 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cctcctccaccacctccttc 41 |||||||||||||||||||| Sbjct: 3982 cctcctccaccacctccttc 4001
>gb|AC140232.2| Mus musculus BAC clone RP24-498F17 from chromosome 5, complete sequence Length = 183612 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 cctcctccaccacctccttccacccctc 49 |||||||| || |||||||||||||||| Sbjct: 77708 cctcctcctcctcctccttccacccctc 77735
>gb|BC052925.1| Mus musculus butyrophilin-like 1, mRNA (cDNA clone MGC:56990 IMAGE:6398253), complete cds Length = 3571 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 cctcctccaccacctccttccacccctc 49 |||||||| || |||||||||||||||| Sbjct: 2630 cctcctccccctcctccttccacccctc 2657
>ref|XM_748828.1| Aspergillus fumigatus Af293 zinc finger protein gcs1 (Afu5g07130) partial mRNA Length = 1239 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 cttcgtccgctccgtcaccatgga 300 ||||||||||||| |||||||||| Sbjct: 177 cttcgtccgctccatcaccatgga 200
>ref|XM_750272.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g10320) partial mRNA Length = 3666 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cctcctccaccacctccttc 41 |||||||||||||||||||| Sbjct: 2401 cctcctccaccacctccttc 2420
>ref|XM_848658.1| PREDICTED: Canis familiaris similar to pellino 2 (LOC611036), mRNA Length = 1149 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctcctccaccacctccttcc 42 |||||||||||||||||||| Sbjct: 912 ctcctccaccacctccttcc 893
>gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete sequence Length = 256751 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cctcctccaccacctccttc 41 |||||||||||||||||||| Sbjct: 211808 cctcctccaccacctccttc 211789
>emb|BX255925.17| Human DNA sequence from clone RP13-122B23 on chromosome 9, complete sequence Length = 100719 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 ggctcagggagctgcaggggcagc 155 ||||||||||||| |||||||||| Sbjct: 91938 ggctcagggagcttcaggggcagc 91961
>emb|AL512410.14| Human DNA sequence from clone RP11-100E6 on chromosome 6, complete sequence Length = 160891 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccctcctccaccacctccttccac 44 ||||||||| |||||||||||||| Sbjct: 73350 ccctcctcccccacctccttccac 73327
>gb|AY063077.1| Arabidopsis thaliana putative ADP ribosylation factor 1 GTPase activating protein (At2g37550) mRNA, complete cds Length = 1402 Score = 40.1 bits (20), Expect = 7.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 222 tcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcg 281 ||||||||||| | || |||||||| |||||||| || | || || |||||| |||| Sbjct: 107 tcttcatgtgcttggaatgctccggtaagcaccgtggtttaggtgttcacatctcattcg 166 Query: 282 tccgctccgtcaccatggactcctggaccgag 313 || | |||||||||||||| || ||| ||||| Sbjct: 167 tcagatccgtcaccatggattcatggtccgag 198
>gb|AY034983.1| Arabidopsis thaliana putative ADP ribosylation factor 1 GTPase activating protein (At2g37550) mRNA, complete cds Length = 1807 Score = 40.1 bits (20), Expect = 7.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 222 tcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcg 281 ||||||||||| | || |||||||| |||||||| || | || || |||||| |||| Sbjct: 168 tcttcatgtgcttggaatgctccggtaagcaccgtggtttaggtgttcacatctcattcg 227 Query: 282 tccgctccgtcaccatggactcctggaccgag 313 || | |||||||||||||| || ||| ||||| Sbjct: 228 tcagatccgtcaccatggattcatggtccgag 259
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cctcctccaccacctccttc 41 |||||||||||||||||||| Sbjct: 1727911 cctcctccaccacctccttc 1727892
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccctcctccaccacctccttccac 44 |||||| ||||||||||||||||| Sbjct: 16037 ccctccaccaccacctccttccac 16014
>gb|AY103310.1| Arabidopsis thaliana At2g37550/F13M22.5 mRNA, complete cds Length = 1371 Score = 40.1 bits (20), Expect = 7.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 222 tcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcg 281 ||||||||||| | || |||||||| |||||||| || | || || |||||| |||| Sbjct: 107 tcttcatgtgcttggaatgctccggtaagcaccgtggtttaggtgttcacatctcattcg 166 Query: 282 tccgctccgtcaccatggactcctggaccgag 313 || | |||||||||||||| || ||| ||||| Sbjct: 167 tcagatccgtcaccatggattcatggtccgag 198
>gb|DQ397607.1| Cenarchaeum symbiosum clone C12A09, complete sequence Length = 38974 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 acgcccggatctgccgcgcc 519 |||||||||||||||||||| Sbjct: 38256 acgcccggatctgccgcgcc 38275
>gb|DQ397567.1| Cenarchaeum symbiosum clone C07B06, complete sequence Length = 41363 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gctgcaggggcagccgggga 161 |||||||||||||||||||| Sbjct: 5434 gctgcaggggcagccgggga 5453
>gb|AY121694.1| Drosophila melanogaster RE63354 full insert cDNA Length = 2099 Score = 40.1 bits (20), Expect = 7.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 213 cctacggcgtcttcatgtgcctcgagtgctccggcaagca 252 |||||||| ||| || ||||| ||||||||||||||||| Sbjct: 475 cctacggcatctggatctgcctggagtgctccggcaagca 514
>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167344 Score = 40.1 bits (20), Expect = 7.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 213 cctacggcgtcttcatgtgcctcgagtgctccggcaagca 252 |||||||| ||| || ||||| ||||||||||||||||| Sbjct: 94923 cctacggcatctggatctgcctggagtgctccggcaagca 94884
>gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 genomic sequence, complete sequence Length = 113606 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccctcctccaccacctccttccac 44 |||||| ||||||||||||||||| Sbjct: 15176 ccctccaccaccacctccttccac 15199
>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence Length = 93845 Score = 40.1 bits (20), Expect = 7.3 Identities = 74/92 (80%) Strand = Plus / Minus Query: 222 tcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcg 281 ||||||||||| | || |||||||| |||||||| || | || || |||||| |||| Sbjct: 13416 tcttcatgtgcttggaatgctccggtaagcaccgtggtttaggtgttcacatctcattcg 13357 Query: 282 tccgctccgtcaccatggactcctggaccgag 313 || | |||||||||||||| || ||| ||||| Sbjct: 13356 tcagatccgtcaccatggattcatggtccgag 13325
>ref|NM_079316.2| Drosophila melanogaster GTPase-activating protein 69C CG4237-RA (Gap69C), mRNA Length = 2208 Score = 40.1 bits (20), Expect = 7.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 213 cctacggcgtcttcatgtgcctcgagtgctccggcaagca 252 |||||||| ||| || ||||| ||||||||||||||||| Sbjct: 598 cctacggcatctggatctgcctggagtgctccggcaagca 637
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cccgatcccggatccggcgccgca 94 |||||||||||||| ||||||||| Sbjct: 1072944 cccgatcccggatcaggcgccgca 1072967
>gb|AF436828.1|AF436828 Arabidopsis thaliana At2g37550/F13M22.5 mRNA, complete cds Length = 1793 Score = 40.1 bits (20), Expect = 7.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 222 tcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcg 281 ||||||||||| | || |||||||| |||||||| || | || || |||||| |||| Sbjct: 169 tcttcatgtgcttggaatgctccggtaagcaccgtggtttaggtgttcacatctcattcg 228 Query: 282 tccgctccgtcaccatggactcctggaccgag 313 || | |||||||||||||| || ||| ||||| Sbjct: 229 tcagatccgtcaccatggattcatggtccgag 260
>gb|AF399707.1|AF399707 Tetrahymena thermophila telomerase RNA, complete sequence Length = 4670 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ccctcctccaccacctcctt 40 |||||||||||||||||||| Sbjct: 503 ccctcctccaccacctcctt 522
>gb|AC153650.4| Mus musculus BAC clone RP24-93I18 from chromosome 1, complete sequence Length = 199753 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cctcctccaccacctccttc 41 |||||||||||||||||||| Sbjct: 113379 cctcctccaccacctccttc 113360
>gb|AC148683.1| Macaca mulatta Major Histocompatibility Complex BAC MMU162B17, complete sequence Length = 181079 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 agccctcctccaccacctccttcc 42 |||||||||||||| ||||||||| Sbjct: 155501 agccctcctccacctcctccttcc 155524
>gb|AF011427.1|AF011427 Drosophila melanogaster putative ARF1 GTPase activating protein (ARF1-GAP) mRNA, complete cds Length = 2209 Score = 40.1 bits (20), Expect = 7.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 213 cctacggcgtcttcatgtgcctcgagtgctccggcaagca 252 |||||||| ||| || ||||| ||||||||||||||||| Sbjct: 598 cctacggcatctggatctgcctggagtgctccggcaagca 637
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccctcctccaccacctccttccac 44 |||||| ||||||||||||||||| Sbjct: 19062627 ccctccaccaccacctccttccac 19062650
>emb|BX815429.1|CNS0ABI4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1468 Score = 40.1 bits (20), Expect = 7.3 Identities = 74/92 (80%) Strand = Plus / Minus Query: 222 tcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcg 281 ||||||||||| | || |||||||| |||||||| || | || || |||||| |||| Sbjct: 629 tcttcatgtgcttggaatgctccggtaagcaccgtggtttaggtgttcacatctcattcg 570 Query: 282 tccgctccgtcaccatggactcctggaccgag 313 || | |||||||||||||| || ||| ||||| Sbjct: 569 tcagatccgtcaccatggattcatggtccgag 538
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 agccctcctccaccacctccttcc 42 |||||||||||||| ||||||||| Sbjct: 2066636 agccctcctccacctcctccttcc 2066613
>gb|AC079610.4| Homo sapiens BAC clone RP11-105N14 from 2, complete sequence Length = 161031 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 cctcctccaccacctccttccacccctc 49 |||||||| || |||||||||||||||| Sbjct: 10297 cctcctcctcctcctccttccacccctc 10324
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 103 cccggcgatggcgtccacggcggcgagg 130 |||| |||||||||||||||||| |||| Sbjct: 1792026 cccgccgatggcgtccacggcggtgagg 1791999
>dbj|AB097904.1| Streptomyces carzinostaticus DNA, biosynthetic gene cluster for antitumor antibiotic Neocarzilin, complete and partial cds Length = 33079 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 cgccctcgccgagggccgcg 470 |||||||||||||||||||| Sbjct: 12888 cgccctcgccgagggccgcg 12907
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete sequence Length = 265524 Score = 40.1 bits (20), Expect = 7.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 213 cctacggcgtcttcatgtgcctcgagtgctccggcaagca 252 |||||||| ||| || ||||| ||||||||||||||||| Sbjct: 105961 cctacggcatctggatctgcctggagtgctccggcaagca 105922
>emb|CR974457.17| Mouse DNA sequence from clone RP23-319E15 on chromosome 17, complete sequence Length = 124639 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 cctcctccaccacctccttccacccctc 49 |||||||| || |||||||||||||||| Sbjct: 65166 cctcctccccctcctccttccacccctc 65193
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ccctcctccaccacctccttccac 44 |||||| ||||||||||||||||| Sbjct: 19073881 ccctccaccaccacctccttccac 19073904
>gb|AF050157.1|MMHC135G15 Mus musculus major histocompatibility locus class II region: major histocompatibility protein class II alpha chain (IAalpha) and major histocompatibility protein class II beta chain (IEbeta) genes, complete cds; butyrophilin-like (NG9), butyrophilin-like (NG10), hypothetical protein (NG8), and butyrophilin-like (NG11) genes, partial cds; NG12 pseudogene, partial sequence; and hypothetical butyrophilin-like protein (NG13) gene, partial cds Length = 245439 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 cctcctccaccacctccttccacccctc 49 |||||||| || |||||||||||||||| Sbjct: 106334 cctcctccccctcctccttccacccctc 106361
>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391, complete sequence Length = 98505 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ccctcctccaccacctccttccac 44 ||||||||| |||||||||||||| Sbjct: 10446 ccctcctccgccacctccttccac 10423
>gb|L13392.1|ECOKILCX Escherichia coli kilC gene, complete cds Length = 1750 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 cgcggccaccaaccgagcccgatc 77 ||||||||||||||| |||||||| Sbjct: 210 cgcggccaccaaccgcgcccgatc 233
>dbj|AB017876.1| Arabidopsis thaliana mRNA for Asp1, complete cds Length = 1878 Score = 40.1 bits (20), Expect = 7.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 222 tcttcatgtgcctcgagtgctccggcaagcaccggggcctcggcgtgcacatcagcttcg 281 ||||||||||| | || |||||||| |||||||| || | || || |||||| |||| Sbjct: 254 tcttcatgtgcttggaatgctccggtaagcaccgtggtttaggtgttcacatctcattcg 313 Query: 282 tccgctccgtcaccatggactcctggaccgag 313 || | |||||||||||||| || ||| ||||| Sbjct: 314 tcagatccgtcaccatggattcatggtccgag 345 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,502,932 Number of Sequences: 3902068 Number of extensions: 3502932 Number of successful extensions: 95129 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 93116 Number of HSP's gapped (non-prelim): 2018 length of query: 538 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 515 effective length of database: 17,143,297,704 effective search space: 8828798317560 effective search space used: 8828798317560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)