ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30g09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150M03, full insert sequence Length = 1238 Score = 464 bits (234), Expect = e-127 Identities = 369/414 (89%) Strand = Plus / Plus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 173 atggggaccctcgggcgcgcgatctacacggtggggaagtggatccgcggcacggggcag 232 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcaggtgtca 252 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| Sbjct: 233 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgaggagcagctttca 292 Query: 253 aggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttttt 312 |||||||| || |||||| ||||||||| || ||||| | || |||| ||||||||| Sbjct: 293 aggcatcgcacgatcatgaacatatttgagaaagagcccagagtccacaaggatgttttt 352 Query: 313 gttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatctgg 372 ||||| ||||||||| |||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 353 gttgctcccagtgcagctgtgattggcgatgttgagatcggacatggatcctcaatctgg 412 Query: 373 tatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaatata 432 || |||||| |||| ||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 413 tacggctccattttaagaggtgatgtcaacagcattcatattggatctggatcaaatata 472 Query: 433 caggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccgacg 492 || ||||| |||||||||||||||||||| ||| ||| || |||||||| || || || Sbjct: 473 caagacaattcccttgtacatgttgcaaaagctaacatcagcgggaaggttctcccaacc 532 Query: 493 atcattggaagcaacgttacagtaggtcatagtgctgttttgcatgcatgcacc 546 || ||||||| ||| |||||| ||||||||||||||||| |||| ||||||||| Sbjct: 533 ataattggaaacaatgttacaataggtcatagtgctgttctgcacgcatgcacc 586
>dbj|AK058974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D04, full insert sequence Length = 1195 Score = 464 bits (234), Expect = e-127 Identities = 369/414 (89%) Strand = Plus / Plus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 175 atggggaccctcgggcgcgcgatctacacggtggggaagtggatccgcggcacggggcag 234 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcaggtgtca 252 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| Sbjct: 235 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgaggagcagctttca 294 Query: 253 aggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttttt 312 |||||||| || |||||| ||||||||| || ||||| | || |||| ||||||||| Sbjct: 295 aggcatcgcacgatcatgaacatatttgagaaagagcccagagtccacaaggatgttttt 354 Query: 313 gttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatctgg 372 ||||| ||||||||| |||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 355 gttgctcccagtgcagctgtgattggcgatgttgagatcggacatggatcctcaatctgg 414 Query: 373 tatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaatata 432 || |||||| |||| ||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 415 tacggctccattttaagaggtgatgtcaacagcattcatattggatctggatcaaatata 474 Query: 433 caggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccgacg 492 || ||||| |||||||||||||||||||| ||| ||| || |||||||| || || || Sbjct: 475 caagacaattcccttgtacatgttgcaaaagctaacatcagcgggaaggttctcccaacc 534 Query: 493 atcattggaagcaacgttacagtaggtcatagtgctgttttgcatgcatgcacc 546 || ||||||| ||| |||||| ||||||||||||||||| |||| ||||||||| Sbjct: 535 ataattggaaacaatgttacaataggtcatagtgctgttctgcacgcatgcacc 588
>gb|AY107290.1| Zea mays PCO063868 mRNA sequence Length = 1381 Score = 444 bits (224), Expect = e-121 Identities = 371/420 (88%) Strand = Plus / Plus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 172 atgggtaccctggggcgcgcgatcttcacggtgggcaagtggatccggggcacggggcag 231 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcaggtgtca 252 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||| Sbjct: 232 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgaggaacaggtttca 291 Query: 253 aggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttttt 312 |||||||||||| |||||| || ||||| || |||||| ||||| | | |||||| ||| Sbjct: 292 aggcatcgtacaatcatgaatatttttgagaaagagccaaggatccatagagatgtgttt 351 Query: 313 gttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatctgg 372 ||||| ||||||||| | |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 352 gttgctcccagtgcagcagtcattggggatgttgagattggtcatggatcgtcaatctgg 411 Query: 373 tatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaatata 432 || || ||| | |||||||||||||||||||| |||| |||||||||||| || |||||| Sbjct: 412 tacggatccatattgagaggtgatgtcaacagcattcatattggatctggttctaatata 471 Query: 433 caggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccgacg 492 || ||||| ||||||||||||||| |||| ||| |||||| ||||||||||| || || Sbjct: 472 caagacaattcccttgtacatgtttcaaaagctaacattagcgggaaggtcctcccaacc 531 Query: 493 atcattggaagcaacgttacagtaggtcatagtgctgttttgcatgcatgcaccattgag 552 || |||||||||||||| ||||| ||||| |||||||| || |||||||| ||||||||| Sbjct: 532 ataattggaagcaacgtgacagtgggtcacagtgctgtattacatgcatgtaccattgag 591
>gb|BT017479.1| Zea mays clone EL01N0408G09.c mRNA sequence Length = 1166 Score = 408 bits (206), Expect = e-111 Identities = 347/394 (88%) Strand = Plus / Plus Query: 159 cacggtgggcaagtggatccgtggcacggggcaggccatggaccgcctcggatccaccat 218 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10 cacggtgggcaagtggatccggggcacggggcaggccatggaccgcctcggatccaccat 69 Query: 219 ccagggcggcctccgcgccgaggagcaggtgtcaaggcatcgtacagtcatgagcatatt 278 ||||||||||||||||| |||||| ||||| ||||||||||||||| |||||| || || Sbjct: 70 ccagggcggcctccgcgtcgaggaacaggtttcaaggcatcgtacaatcatgaatatttt 129 Query: 279 tgataaggagccacggatcaacaaagatgtttttgttgcgcccagtgcatctgtcattgg 338 ||| || |||||| ||||| | | |||||| |||||||| ||||||||| | |||||||| Sbjct: 130 tgagaaagagccaaggatccatagagatgtgtttgttgctcccagtgcagcagtcattgg 189 Query: 339 tgatgttgagattggacatggatcatcaatctggtatggctccgttttgagaggtgatgt 398 |||||||||||||| |||||||| ||||||||||| || ||| | |||||||||||||| Sbjct: 190 ggatgttgagattggtcatggatcgtcaatctggtacggatccatattgagaggtgatgt 249 Query: 399 caacagtattcgtattggatctggatcaaatatacaggacaactcccttgtacatgttgc 458 |||||| |||| |||||||||||| | |||||||| ||||| ||||||||||||||| | Sbjct: 250 caacagcattcatattggatctggtactaatatacaagacaattcccttgtacatgtttc 309 Query: 459 aaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgttacagtagg 518 ||| ||| |||||| ||||||||||| || || || |||||||||||||| ||||| || Sbjct: 310 aaaagctaacattagcgggaaggtcctcccaaccataattggaagcaacgtgacagtggg 369 Query: 519 tcatagtgctgttttgcatgcatgcaccattgag 552 ||| |||||||| || |||||||| ||||||||| Sbjct: 370 tcacagtgctgtattacatgcatgtaccattgag 403
>ref|XM_479312.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 404 bits (204), Expect = e-109 Identities = 360/412 (87%) Strand = Plus / Plus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||||||||| ||||| ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 83 atggggaccctggggcgggcgatctacacggcggggaagtggatccgcggcacggggcag 142 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcaggtgtca 252 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || || Sbjct: 143 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgacgagcagctgcca 202 Query: 253 aggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttttt 312 |||||||| ||| |||||| ||||||||| || ||||| | ||| |||| ||||||||| Sbjct: 203 aggcatcgcacaatcatgaacatatttgagaaagagcccagaatccacaaggatgttttt 262 Query: 313 gttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatctgg 372 ||||| ||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||| Sbjct: 263 gttgctcccagtgcagctgtgattggtgatattgagattggacatggatcctcaatctgg 322 Query: 373 tatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaatata 432 ||||||||| |||| ||||||||||||||||| |||| ||||||| |||| |||||||| Sbjct: 323 tatggctccattttaagaggtgatgtcaacagcattcatattggagttggaacaaatata 382 Query: 433 caggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccgacg 492 || ||||| ||||||||||||||| |||| ||| || ||||||||||| || || || Sbjct: 383 caagacaattcccttgtacatgtttcaaaagctaatatcagtgggaaggttctcccaacc 442 Query: 493 atcattggaagcaacgttacagtaggtcatagtgctgttttgcatgcatgca 544 || ||||||| || |||||| ||||||| ||||||||| | || ||||||| Sbjct: 443 ataattggaaacagtgttacaataggtcacagtgctgttctacacgcatgca 494
>dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G03, full insert sequence Length = 1155 Score = 404 bits (204), Expect = e-109 Identities = 360/412 (87%) Strand = Plus / Plus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||||||||| ||||| ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 83 atggggaccctggggcgggcgatctacacggcggggaagtggatccgcggcacggggcag 142 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcaggtgtca 252 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || || Sbjct: 143 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgacgagcagctgcca 202 Query: 253 aggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttttt 312 |||||||| ||| |||||| ||||||||| || ||||| | ||| |||| ||||||||| Sbjct: 203 aggcatcgcacaatcatgaacatatttgagaaagagcccagaatccacaaggatgttttt 262 Query: 313 gttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatctgg 372 ||||| ||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||| Sbjct: 263 gttgctcccagtgcagctgtgattggtgatattgagattggacatggatcctcaatctgg 322 Query: 373 tatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaatata 432 ||||||||| |||| ||||||||||||||||| |||| ||||||| |||| |||||||| Sbjct: 323 tatggctccattttaagaggtgatgtcaacagcattcatattggagttggaacaaatata 382 Query: 433 caggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccgacg 492 || ||||| ||||||||||||||| |||| ||| || ||||||||||| || || || Sbjct: 383 caagacaattcccttgtacatgtttcaaaagctaatatcagtgggaaggttctcccaacc 442 Query: 493 atcattggaagcaacgttacagtaggtcatagtgctgttttgcatgcatgca 544 || ||||||| || |||||| ||||||| ||||||||| | || ||||||| Sbjct: 443 ataattggaaacagtgttacaataggtcacagtgctgttctacacgcatgca 494
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 202 bits (102), Expect = 9e-49 Identities = 111/114 (97%) Strand = Plus / Plus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 3548389 atggggaccctcgggcgcgcgatctacacggtggggaagtggatccgcggcacggggcag 3548448 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcag 246 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3548449 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgaggagcag 3548502 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 390 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 449 ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 3550085 aggtgatgtcaacagcattcatattggatctggatcaaatatacaagacaattcccttgt 3550144 Query: 450 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 509 |||||||||||| ||| ||| || |||||||| || || || || ||||||| ||| || Sbjct: 3550145 acatgttgcaaaagctaacatcagcgggaaggttctcccaaccataattggaaacaatgt 3550204 Query: 510 tacagtaggtca 521 |||| ||||||| Sbjct: 3550205 tacaataggtca 3550216 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 250 tcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgtt 309 ||||||||||| || |||||| ||||||||| || ||||| | || |||| |||||| Sbjct: 3549284 tcaaggcatcgcacgatcatgaacatatttgagaaagagcccagagtccacaaggatgtt 3549343 Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| ||||||||| |||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 3549344 tttgttgctcccagtgcagctgtgattggcgatgttgagatcggacatggatcctcaatc 3549403 Query: 370 tggtatggctccgttttgagaggt 393 ||||| |||||| |||| |||||| Sbjct: 3549404 tggtacggctccattttaagaggt 3549427 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 516 aggtcatagtgctgttttgcatgcatgcacc 546 |||||||||||||||| |||| ||||||||| Sbjct: 3550466 aggtcatagtgctgttctgcacgcatgcacc 3550496
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 202 bits (102), Expect = 9e-49 Identities = 111/114 (97%) Strand = Plus / Plus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 3548334 atggggaccctcgggcgcgcgatctacacggtggggaagtggatccgcggcacggggcag 3548393 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcag 246 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3548394 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgaggagcag 3548447 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 390 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 449 ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 3550030 aggtgatgtcaacagcattcatattggatctggatcaaatatacaagacaattcccttgt 3550089 Query: 450 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 509 |||||||||||| ||| ||| || |||||||| || || || || ||||||| ||| || Sbjct: 3550090 acatgttgcaaaagctaacatcagcgggaaggttctcccaaccataattggaaacaatgt 3550149 Query: 510 tacagtaggtca 521 |||| ||||||| Sbjct: 3550150 tacaataggtca 3550161 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 250 tcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgtt 309 ||||||||||| || |||||| ||||||||| || ||||| | || |||| |||||| Sbjct: 3549229 tcaaggcatcgcacgatcatgaacatatttgagaaagagcccagagtccacaaggatgtt 3549288 Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| ||||||||| |||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 3549289 tttgttgctcccagtgcagctgtgattggcgatgttgagatcggacatggatcctcaatc 3549348 Query: 370 tggtatggctccgttttgagaggt 393 ||||| |||||| |||| |||||| Sbjct: 3549349 tggtacggctccattttaagaggt 3549372 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 516 aggtcatagtgctgttttgcatgcatgcacc 546 |||||||||||||||| |||| ||||||||| Sbjct: 3550411 aggtcatagtgctgttctgcacgcatgcacc 3550441
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 202 bits (102), Expect = 9e-49 Identities = 111/114 (97%) Strand = Plus / Plus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 63317 atggggaccctcgggcgcgcgatctacacggtggggaagtggatccgcggcacggggcag 63376 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcag 246 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 63377 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgaggagcag 63430 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 390 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 449 ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 65013 aggtgatgtcaacagcattcatattggatctggatcaaatatacaagacaattcccttgt 65072 Query: 450 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 509 |||||||||||| ||| ||| || |||||||| || || || || ||||||| ||| || Sbjct: 65073 acatgttgcaaaagctaacatcagcgggaaggttctcccaaccataattggaaacaatgt 65132 Query: 510 tacagtaggtca 521 |||| ||||||| Sbjct: 65133 tacaataggtca 65144 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 250 tcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgtt 309 ||||||||||| || |||||| ||||||||| || ||||| | || |||| |||||| Sbjct: 64212 tcaaggcatcgcacgatcatgaacatatttgagaaagagcccagagtccacaaggatgtt 64271 Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| ||||||||| |||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 64272 tttgttgctcccagtgcagctgtgattggcgatgttgagatcggacatggatcctcaatc 64331 Query: 370 tggtatggctccgttttgagaggt 393 ||||| |||||| |||| |||||| Sbjct: 64332 tggtacggctccattttaagaggt 64355 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 516 aggtcatagtgctgttttgcatgcatgcacc 546 |||||||||||||||| |||| ||||||||| Sbjct: 65394 aggtcatagtgctgttctgcacgcatgcacc 65424
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 170 bits (86), Expect = 3e-39 Identities = 107/114 (93%) Strand = Plus / Minus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||||||||| ||||| ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 26725015 atggggaccctggggcgggcgatctacacggcggggaagtggatccgcggcacggggcag 26724956 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcag 246 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 26724955 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgacgagcag 26724902 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Minus Query: 251 caaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttt 310 |||||||||| ||| |||||| ||||||||| || ||||| | ||| |||| ||||||| Sbjct: 26724330 caaggcatcgcacaatcatgaacatatttgagaaagagcccagaatccacaaggatgttt 26724271 Query: 311 ttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatct 370 ||||||| ||||||||| |||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 26724270 ttgttgctcccagtgcagctgtgattggtgatattgagattggacatggatcctcaatct 26724211 Query: 371 ggtatggctccgttttgagaggt 393 ||||||||||| |||| |||||| Sbjct: 26724210 ggtatggctccattttaagaggt 26724188 Score = 87.7 bits (44), Expect = 4e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 390 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 449 ||||||||||||||| |||| ||||||| |||| |||||||||| ||||| |||||||| Sbjct: 26723356 aggtgatgtcaacagcattcatattggagttggaacaaatatacaagacaattcccttgt 26723297 Query: 450 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 509 ||||||| |||| ||| || ||||||||||| || || || || ||||||| || || Sbjct: 26723296 acatgtttcaaaagctaatatcagtgggaaggttctcccaaccataattggaaacagtgt 26723237 Query: 510 tacagtaggtca 521 |||| ||||||| Sbjct: 26723236 tacaataggtca 26723225
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 170 bits (86), Expect = 3e-39 Identities = 107/114 (93%) Strand = Plus / Minus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||||||||| ||||| ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 71872 atggggaccctggggcgggcgatctacacggcggggaagtggatccgcggcacggggcag 71813 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcag 246 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 71812 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgacgagcag 71759 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Minus Query: 251 caaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttt 310 |||||||||| ||| |||||| ||||||||| || ||||| | ||| |||| ||||||| Sbjct: 71187 caaggcatcgcacaatcatgaacatatttgagaaagagcccagaatccacaaggatgttt 71128 Query: 311 ttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatct 370 ||||||| ||||||||| |||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 71127 ttgttgctcccagtgcagctgtgattggtgatattgagattggacatggatcctcaatct 71068 Query: 371 ggtatggctccgttttgagaggt 393 ||||||||||| |||| |||||| Sbjct: 71067 ggtatggctccattttaagaggt 71045 Score = 87.7 bits (44), Expect = 4e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 390 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 449 ||||||||||||||| |||| ||||||| |||| |||||||||| ||||| |||||||| Sbjct: 70213 aggtgatgtcaacagcattcatattggagttggaacaaatatacaagacaattcccttgt 70154 Query: 450 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 509 ||||||| |||| ||| || ||||||||||| || || || || ||||||| || || Sbjct: 70153 acatgtttcaaaagctaatatcagtgggaaggttctcccaaccataattggaaacagtgt 70094 Query: 510 tacagtaggtca 521 |||| ||||||| Sbjct: 70093 tacaataggtca 70082
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 170 bits (86), Expect = 3e-39 Identities = 107/114 (93%) Strand = Plus / Minus Query: 133 atggggaccctcgggcgcgcgatctacacggtgggcaagtggatccgtggcacggggcag 192 ||||||||||| ||||| ||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 142619 atggggaccctggggcgggcgatctacacggcggggaagtggatccgcggcacggggcag 142560 Query: 193 gccatggaccgcctcggatccaccatccagggcggcctccgcgccgaggagcag 246 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 142559 gccatggaccgcctcggatccaccatccagggcggcctccgcgtcgacgagcag 142506 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Minus Query: 251 caaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttt 310 |||||||||| ||| |||||| ||||||||| || ||||| | ||| |||| ||||||| Sbjct: 141934 caaggcatcgcacaatcatgaacatatttgagaaagagcccagaatccacaaggatgttt 141875 Query: 311 ttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatct 370 ||||||| ||||||||| |||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 141874 ttgttgctcccagtgcagctgtgattggtgatattgagattggacatggatcctcaatct 141815 Query: 371 ggtatggctccgttttgagaggt 393 ||||||||||| |||| |||||| Sbjct: 141814 ggtatggctccattttaagaggt 141792 Score = 87.7 bits (44), Expect = 4e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 390 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 449 ||||||||||||||| |||| ||||||| |||| |||||||||| ||||| |||||||| Sbjct: 140960 aggtgatgtcaacagcattcatattggagttggaacaaatatacaagacaattcccttgt 140901 Query: 450 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 509 ||||||| |||| ||| || ||||||||||| || || || || ||||||| || || Sbjct: 140900 acatgtttcaaaagctaatatcagtgggaaggttctcccaaccataattggaaacagtgt 140841 Query: 510 tacagtaggtca 521 |||| ||||||| Sbjct: 140840 tacaataggtca 140829
>ref|NM_187710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 73.8 bits (37), Expect = 5e-10 Identities = 175/221 (79%) Strand = Plus / Plus Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 178 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 237 Query: 370 tggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaat 429 |||||||| | ||| || ||||| |||| |||| ||| ||||||||||| | ||| Sbjct: 238 tggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaat 297 Query: 430 atacaggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccg 489 ||||| ||||| || ||||| ||||| ||||| ||| ||||||| || ||| |||| Sbjct: 298 atacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttcca 357 Query: 490 acgatcattggaagcaacgttacagtaggtcatagtgctgt 530 || |||||||| ||||| |||||||||||||||||||| Sbjct: 358 accatcattggggataacgtcacagtaggtcatagtgctgt 398
>dbj|AK122051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G12, full insert sequence Length = 1036 Score = 73.8 bits (37), Expect = 5e-10 Identities = 175/221 (79%) Strand = Plus / Plus Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 277 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 336 Query: 370 tggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaat 429 |||||||| | ||| || ||||| |||| |||| ||| ||||||||||| | ||| Sbjct: 337 tggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaat 396 Query: 430 atacaggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccg 489 ||||| ||||| || ||||| ||||| ||||| ||| ||||||| || ||| |||| Sbjct: 397 atacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttcca 456 Query: 490 acgatcattggaagcaacgttacagtaggtcatagtgctgt 530 || |||||||| ||||| |||||||||||||||||||| Sbjct: 457 accatcattggggataacgtcacagtaggtcatagtgctgt 497
>dbj|AK104205.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-F03, full insert sequence Length = 1086 Score = 73.8 bits (37), Expect = 5e-10 Identities = 175/221 (79%) Strand = Plus / Plus Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 327 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 386 Query: 370 tggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaat 429 |||||||| | ||| || ||||| |||| |||| ||| ||||||||||| | ||| Sbjct: 387 tggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaat 446 Query: 430 atacaggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccg 489 ||||| ||||| || ||||| ||||| ||||| ||| ||||||| || ||| |||| Sbjct: 447 atacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttcca 506 Query: 490 acgatcattggaagcaacgttacagtaggtcatagtgctgt 530 || |||||||| ||||| |||||||||||||||||||| Sbjct: 507 accatcattggggataacgtcacagtaggtcatagtgctgt 547
>dbj|AK071713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109L19, full insert sequence Length = 1156 Score = 73.8 bits (37), Expect = 5e-10 Identities = 175/221 (79%) Strand = Plus / Plus Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 319 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 378 Query: 370 tggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaat 429 |||||||| | ||| || ||||| |||| |||| ||| ||||||||||| | ||| Sbjct: 379 tggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaat 438 Query: 430 atacaggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccg 489 ||||| ||||| || ||||| ||||| ||||| ||| ||||||| || ||| |||| Sbjct: 439 atacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttcca 498 Query: 490 acgatcattggaagcaacgttacagtaggtcatagtgctgt 530 || |||||||| ||||| |||||||||||||||||||| Sbjct: 499 accatcattggggataacgtcacagtaggtcatagtgctgt 539
>dbj|AK060908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F08, full insert sequence Length = 1086 Score = 73.8 bits (37), Expect = 5e-10 Identities = 175/221 (79%) Strand = Plus / Plus Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 327 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 386 Query: 370 tggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaat 429 |||||||| | ||| || ||||| |||| |||| ||| ||||||||||| | ||| Sbjct: 387 tggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaat 446 Query: 430 atacaggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccg 489 ||||| ||||| || ||||| ||||| ||||| ||| ||||||| || ||| |||| Sbjct: 447 atacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttcca 506 Query: 490 acgatcattggaagcaacgttacagtaggtcatagtgctgt 530 || |||||||| ||||| |||||||||||||||||||| Sbjct: 507 accatcattggggataacgtcacagtaggtcatagtgctgt 547
>gb|BT014370.1| Lycopersicon esculentum clone 133658F, mRNA sequence Length = 1217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 388 agaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactccctt 447 ||||||||||| ||||| || || | |||||||| | ||||||||||||||||||||| Sbjct: 414 agaggtgatgttaacagcatcagtgtcggatctggtaccaatatacaggacaactccctt 473 Query: 448 gtacatgt 455 || ||||| Sbjct: 474 gttcatgt 481
>gb|AY596527.1| Saccharum officinarum clone SCCCLB1004G11, complete sequence Length = 1189 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 472 agtgggaaggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgt 530 |||||||| ||| |||| || |||||||| | ||||| |||||||||||||||||||| Sbjct: 707 agtgggaaagtctttccaacaatcattggcaataacgtcacagtaggtcatagtgctgt 649
>gb|AY105930.1| Zea mays PCO135569 mRNA sequence Length = 1279 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 472 agtgggaaggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgt 530 |||||||||||| |||| || | |||||| | ||||| |||||||||||||||||||| Sbjct: 462 agtgggaaggtctttccaacaaccattggtaataacgtcacagtaggtcatagtgctgt 520
>ref|NM_103620.2| Arabidopsis thaliana APFI AT1G47260 (APFI) mRNA, complete cds Length = 1750 Score = 52.0 bits (26), Expect = 0.002 Identities = 143/182 (78%) Strand = Plus / Plus Query: 301 aaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgga 360 |||||||| ||||| || || ||||| ||||| |||||||||||| |||| ||| | || Sbjct: 306 aaagatgtgtttgtggctccgagtgcttctgttattggtgatgttcagatcggaaaaggc 365 Query: 361 tcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatct 420 || || || |||||||||| ||| | |||||||||| || | || || |||||||| Sbjct: 366 tcgtcgatttggtatggctgtgttcttcgaggtgatgtgaataacatcagtgttggatct 425 Query: 421 ggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaag 480 || | ||||| || || || | |||||||||||||||||||| | ||| ||||| ||| Sbjct: 426 gggacgaatatccaagataatacgcttgtacatgttgcaaagaccaacataagtggcaag 485 Query: 481 gt 482 || Sbjct: 486 gt 487
>gb|AY113936.1| Arabidopsis thaliana unknown protein (At1g47260) mRNA, complete cds Length = 868 Score = 52.0 bits (26), Expect = 0.002 Identities = 143/182 (78%) Strand = Plus / Plus Query: 301 aaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgga 360 |||||||| ||||| || || ||||| ||||| |||||||||||| |||| ||| | || Sbjct: 169 aaagatgtgtttgtggctccgagtgcttctgttattggtgatgttcagatcggaaaaggc 228 Query: 361 tcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatct 420 || || || |||||||||| ||| | |||||||||| || | || || |||||||| Sbjct: 229 tcgtcgatttggtatggctgtgttcttcgaggtgatgtgaataacatcagtgttggatct 288 Query: 421 ggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaag 480 || | ||||| || || || | |||||||||||||||||||| | ||| ||||| ||| Sbjct: 289 gggacgaatatccaagataatacgcttgtacatgttgcaaagaccaacataagtggcaag 348 Query: 481 gt 482 || Sbjct: 349 gt 350
>gb|AY045979.1| Arabidopsis thaliana unknown protein (At1g47260) mRNA, complete cds Length = 1182 Score = 52.0 bits (26), Expect = 0.002 Identities = 143/182 (78%) Strand = Plus / Plus Query: 301 aaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgga 360 |||||||| ||||| || || ||||| ||||| |||||||||||| |||| ||| | || Sbjct: 275 aaagatgtgtttgtggctccgagtgcttctgttattggtgatgttcagatcggaaaaggc 334 Query: 361 tcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatct 420 || || || |||||||||| ||| | |||||||||| || | || || |||||||| Sbjct: 335 tcgtcgatttggtatggctgtgttcttcgaggtgatgtgaataacatcagtgttggatct 394 Query: 421 ggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaag 480 || | ||||| || || || | |||||||||||||||||||| | ||| ||||| ||| Sbjct: 395 gggacgaatatccaagataatacgcttgtacatgttgcaaagaccaacataagtggcaag 454 Query: 481 gt 482 || Sbjct: 455 gt 456
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 10119445 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 10119504 Query: 370 tggtatgg 377 |||||||| Sbjct: 10119505 tggtatgg 10119512
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 66914 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 66973 Query: 370 tggtatgg 377 |||||||| Sbjct: 66974 tggtatgg 66981
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 310 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 369 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 44044 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 44103 Query: 370 tggtatgg 377 |||||||| Sbjct: 44104 tggtatgg 44111
>emb|BX816589.1|CNS0ADBJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1092 Score = 46.1 bits (23), Expect = 0.12 Identities = 65/79 (82%) Strand = Plus / Plus Query: 301 aaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgga 360 |||||||| ||||| || || ||||| ||||| |||||||||||| |||| ||| | || Sbjct: 252 aaagatgtgtttgtggctccgagtgcttctgttattggtgatgttcagatcggaaaaggc 311 Query: 361 tcatcaatctggtatggct 379 || || || |||||||||| Sbjct: 312 tcgtcgatttggtatggct 330 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 445 cttgtacatgttgcaaagactagcattagtgggaaggt 482 |||||||||||||||||||| | ||| ||||| ||||| Sbjct: 396 cttgtacatgttgcaaagaccaacataagtggcaaggt 433
>gb|AC079677.4|AC079677 Arabidopsis thaliana chromosome 1 BAC F8G22 genomic sequence, complete sequence Length = 42801 Score = 46.1 bits (23), Expect = 0.12 Identities = 65/79 (82%) Strand = Plus / Plus Query: 301 aaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgga 360 |||||||| ||||| || || ||||| ||||| |||||||||||| |||| ||| | || Sbjct: 7292 aaagatgtgtttgtggctccgagtgcttctgttattggtgatgttcagatcggaaaaggc 7351 Query: 361 tcatcaatctggtatggct 379 || || || |||||||||| Sbjct: 7352 tcgtcgatttggtatggct 7370 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 445 cttgtacatgttgcaaagactagcattagtgggaaggt 482 |||||||||||||||||||| | ||| ||||| ||||| Sbjct: 7696 cttgtacatgttgcaaagaccaacataagtggcaaggt 7733
>ref|NM_126049.3| Arabidopsis thaliana unknown protein AT5G66510 mRNA, complete cds Length = 1223 Score = 44.1 bits (22), Expect = 0.48 Identities = 121/154 (78%) Strand = Plus / Plus Query: 385 ttgagaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcc 444 |||||||| |||| ||||| ||| || ||||| |||| | ||||| ||||||||| | Sbjct: 387 ttgagaggagatgctaacagcattagtgttggagctgggaccaatattcaggacaacgct 446 Query: 445 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 504 ||||| || ||||| ||||| | | | |||||||||||| | || || |||||||| | Sbjct: 447 cttgtccacgttgctaagaccaacttaagtgggaaggtcttacctactgtcattggagac 506 Query: 505 aacgttacagtaggtcatagtgctgttttgcatg 538 || || || | ||||||||||||||||| |||| Sbjct: 507 aatgtcaccattggtcatagtgctgttttacatg 540
>gb|AY079385.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 808 Score = 44.1 bits (22), Expect = 0.48 Identities = 121/154 (78%) Strand = Plus / Plus Query: 385 ttgagaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcc 444 |||||||| |||| ||||| ||| || ||||| |||| | ||||| ||||||||| | Sbjct: 253 ttgagaggagatgctaacagcattagtgttggagctgggaccaatattcaggacaacgct 312 Query: 445 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 504 ||||| || ||||| ||||| | | | |||||||||||| | || || |||||||| | Sbjct: 313 cttgtccacgttgctaagaccaacttaagtgggaaggtcttacctactgtcattggagac 372 Query: 505 aacgttacagtaggtcatagtgctgttttgcatg 538 || || || | ||||||||||||||||| |||| Sbjct: 373 aatgtcaccattggtcatagtgctgttttacatg 406
>gb|AY045784.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 1163 Score = 44.1 bits (22), Expect = 0.48 Identities = 121/154 (78%) Strand = Plus / Plus Query: 385 ttgagaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcc 444 |||||||| |||| ||||| ||| || ||||| |||| | ||||| ||||||||| | Sbjct: 361 ttgagaggagatgctaacagcattagtgttggagctgggaccaatattcaggacaacgct 420 Query: 445 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 504 ||||| || ||||| ||||| | | | |||||||||||| | || || |||||||| | Sbjct: 421 cttgtccacgttgctaagaccaacttaagtgggaaggtcttacctactgtcattggagac 480 Query: 505 aacgttacagtaggtcatagtgctgttttgcatg 538 || || || | ||||||||||||||||| |||| Sbjct: 481 aatgtcaccattggtcatagtgctgttttacatg 514
>emb|BX829487.1|CNS0A1JN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 874 Score = 44.1 bits (22), Expect = 0.48 Identities = 121/154 (78%) Strand = Plus / Plus Query: 385 ttgagaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcc 444 |||||||| |||| ||||| ||| || ||||| |||| | ||||| ||||||||| | Sbjct: 83 ttgagaggagatgctaacagcattagtgttggagctgggaccaatattcaggacaacgct 142 Query: 445 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 504 ||||| || ||||| ||||| | | | |||||||||||| | || || |||||||| | Sbjct: 143 cttgtccacgttgctaagaccaacttaagtgggaaggtcttacctactgtcattggagac 202 Query: 505 aacgttacagtaggtcatagtgctgttttgcatg 538 || || || | ||||||||||||||||| |||| Sbjct: 203 aatgtcaccattggtcatagtgctgttttacatg 236
>gb|AY087379.1| Arabidopsis thaliana clone 34700 mRNA, complete sequence Length = 1198 Score = 44.1 bits (22), Expect = 0.48 Identities = 121/154 (78%) Strand = Plus / Plus Query: 385 ttgagaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcc 444 |||||||| |||| ||||| ||| || ||||| |||| | ||||| ||||||||| | Sbjct: 388 ttgagaggagatgctaacagcattagtgttggagctgggaccaatattcaggacaacgct 447 Query: 445 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 504 ||||| || ||||| ||||| | | | |||||||||||| | || || |||||||| | Sbjct: 448 cttgtccacgttgctaagaccaacttaagtgggaaggtcttacctactgtcattggagac 507 Query: 505 aacgttacagtaggtcatagtgctgttttgcatg 538 || || || | ||||||||||||||||| |||| Sbjct: 508 aatgtcaccattggtcatagtgctgttttacatg 541
>emb|CR631123.6| Zebrafish DNA sequence from clone DKEY-189H14 in linkage group 19, complete sequence Length = 138519 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 cattggaagcaacgttacagtaggt 519 |||||||||||| |||||||||||| Sbjct: 15862 cattggaagcaaagttacagtaggt 15838
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 gcctgcggctgccggcggcgagccc 92 ||||| ||||||||||||||||||| Sbjct: 12913068 gcctgtggctgccggcggcgagccc 12913044
>dbj|AP004325.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1230_H04 Length = 123818 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 gcctgcggctgccggcggcgagccc 92 ||||| ||||||||||||||||||| Sbjct: 85555 gcctgtggctgccggcggcgagccc 85531
>emb|CT030653.10| Mouse DNA sequence from clone RP23-189B14 on chromosome 14, complete sequence Length = 40628 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 tgctgttttgcatgcatgcac 545 ||||||||||||||||||||| Sbjct: 13861 tgctgttttgcatgcatgcac 13841
>ref|NM_120803.1| Arabidopsis thaliana ARR21 (ARABIDOPSIS RESPONSE REGULATOR 21); transcription factor/ two-component response regulator AT5G07210 (ARR21) mRNA, complete cds Length = 1866 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgtattggatctggatcaaa 428 |||||||||||||||||||| Sbjct: 1126 cgtattggatctggatcaaa 1145
>ref|XM_421034.1| PREDICTED: Gallus gallus similar to mucin 5 (LOC423100), mRNA Length = 7710 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ggtgatgttgagattggaca 356 |||||||||||||||||||| Sbjct: 3800 ggtgatgttgagattggaca 3781
>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA project) Length = 104607 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cgtattggatctggatcaaa 428 |||||||||||||||||||| Sbjct: 58971 cgtattggatctggatcaaa 58990
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 cgacgatcattggaagcaac 507 |||||||||||||||||||| Sbjct: 29761 cgacgatcattggaagcaac 29780
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 cgacgatcattggaagcaac 507 |||||||||||||||||||| Sbjct: 35325530 cgacgatcattggaagcaac 35325511
>gb|AF249876.1|AF249876 Arabidopsis thaliana transcription factor APFI mRNA, complete cds Length = 1216 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cttgtacatgttgcaaagac 464 |||||||||||||||||||| Sbjct: 452 cttgtacatgttgcaaagac 471
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cctccgcgccgaggagcagg 247 |||||||||||||||||||| Sbjct: 2098347 cctccgcgccgaggagcagg 2098366
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 ggcggcctccgcgccgaggagcaggtgt 250 ||||||| ||||| |||||||||||||| Sbjct: 116882 ggcggccaccgcggcgaggagcaggtgt 116855
>emb|CR391917.19| Zebrafish DNA sequence from clone DKEY-97O8 in linkage group 1, complete sequence Length = 184212 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 tgcatgcatgcaccattgag 552 |||||||||||||||||||| Sbjct: 131522 tgcatgcatgcaccattgag 131503
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 cgacgatcattggaagcaac 507 |||||||||||||||||||| Sbjct: 121375 cgacgatcattggaagcaac 121356
>emb|AL935287.15| Zebrafish DNA sequence from clone CH211-280O3, complete sequence Length = 174293 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 tgcatgcatgcaccattgag 552 |||||||||||||||||||| Sbjct: 137860 tgcatgcatgcaccattgag 137879
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aaagatgtttttgttgcgcc 320 |||||||||||||||||||| Sbjct: 2552662 aaagatgtttttgttgcgcc 2552643 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,557,567 Number of Sequences: 3902068 Number of extensions: 3557567 Number of successful extensions: 69714 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 69226 Number of HSP's gapped (non-prelim): 472 length of query: 552 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 529 effective length of database: 17,143,297,704 effective search space: 9068804485416 effective search space used: 9068804485416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
