ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30e01 |
|---|---|
| Clone Library Name | barley_pub |
>C72A1_CATRO (Q05047) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin| synthase) (SLS) Length = 524 Score = 39.7 bits (91), Expect = 0.006 Identities = 27/105 (25%), Positives = 46/105 (43%) Frame = +1 Query: 193 AWVSWPRRVGDIFRRQGIDGPPPSSFLTGNLSEMXXXXXXXXXXXXXXXXXXSPWDLHKD 372 AW + P+R+ R+QG G P FL G++ E P + + Sbjct: 31 AWFT-PKRIEKRLRQQGFRGNP-YRFLVGDVKE---------SGKMHQEALSKPMEFN-- 77 Query: 373 GFDDYCKRIFPYFDKWRKAYGDTYLYWLRQRPALYVTDPELIREI 507 +D R+ P+ + YG W+ + P ++V +PELI+E+ Sbjct: 78 --NDIVPRLMPHINHTINTYGRNSFTWMGRIPRIHVMEPELIKEV 120
>SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (SgI)| (Chromogranin B) (CgB) [Contains: Peptide SR-17; Peptide HQ-34; Peptide KR-11] Length = 668 Score = 35.0 bits (79), Expect = 0.14 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +3 Query: 42 GERQGSQGKKGREREREDLDGPGEH 116 GE G +G GR ++ EDL GPGEH Sbjct: 463 GEENGEEGAPGRWQQPEDLQGPGEH 487
>CP3AV_MESAU (O70537) Cytochrome P450 3A31 (EC 1.14.14.1) (CYPIIIA31) (P450| SH3A-1) Length = 501 Score = 34.7 bits (78), Expect = 0.18 Identities = 27/95 (28%), Positives = 39/95 (41%) Frame = +1 Query: 223 DIFRRQGIDGPPPSSFLTGNLSEMXXXXXXXXXXXXXXXXXXSPWDLHKDGFDDYCKRIF 402 DIF++QGI GP P FL GN+ +Y K I+ Sbjct: 31 DIFKKQGIPGPKPLPFL-GNVL-------------------------------NYYKGIW 58 Query: 403 PYFDKWRKAYGDTYLYWLRQRPALYVTDPELIREI 507 + + K YG + + QRP VTD E+I+ + Sbjct: 59 TFDIECHKKYGKIWGLFEGQRPLFTVTDTEMIKNV 93
>CP3AB_MOUSE (Q64459) Cytochrome P450 3A11 (EC 1.14.14.1) (CYPIIIA11)| (P-450IIIAM1) (P-450UT) Length = 504 Score = 33.1 bits (74), Expect = 0.53 Identities = 26/98 (26%), Positives = 39/98 (39%) Frame = +1 Query: 214 RVGDIFRRQGIDGPPPSSFLTGNLSEMXXXXXXXXXXXXXXXXXXSPWDLHKDGFDDYCK 393 R ++F++QGI GP P FL L+ Y K Sbjct: 28 RKHELFKKQGIPGPKPLPFLGTVLN--------------------------------YYK 55 Query: 394 RIFPYFDKWRKAYGDTYLYWLRQRPALYVTDPELIREI 507 ++ + + K YG T+ + Q P L VTDPE I+ + Sbjct: 56 GLWKFDMECYKKYGKTWGLFDGQTPLLAVTDPETIKNV 93
>C340_ORYLA (Q98T91) Cytochrome P450 3A40 (EC 1.14.14.1)| Length = 502 Score = 33.1 bits (74), Expect = 0.53 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +1 Query: 385 YCKRIFPYFDKWRKAYGDTYLYWLRQRPALYVTDPELIRE--IGRCVSL 525 Y K F + D+ RK YG T+ + ++P L +TDP I+ + C SL Sbjct: 53 YRKGFFNFDDECRKKYGKTWGIYDGRQPVLCITDPATIKAVLVKECYSL 101
>CABL2_MOUSE (Q8K3M5) CDK5 and ABL1 enzyme substrate 2 (Interactor with CDK3 2)| (Ik3-2) Length = 481 Score = 32.0 bits (71), Expect = 1.2 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = -2 Query: 523 ATRTGRSPGSAPGPSRTAPAA 461 A G +PG APGPSR APAA Sbjct: 8 AAAAGGAPGPAPGPSRPAPAA 28
>C356_FUNHE (Q8AXY5) Cytochrome P450 3A56 (EC 1.14.14.1) (CYPIIIA56)| Length = 496 Score = 31.2 bits (69), Expect = 2.0 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +1 Query: 385 YCKRIFPYFDKWRKAYGDTYLYWLRQRPALYVTDPELIREI 507 Y + F + ++ +K YG + + ++P L VTDPE+I+ + Sbjct: 52 YRRGFFTFDEECKKKYGKVWGIYDGRQPVLCVTDPEIIKAV 92
>C330_FUNHE (Q9PVE8) Cytochrome P450 3A30 (EC 1.14.14.1) (CYPIIIA30)| Length = 496 Score = 31.2 bits (69), Expect = 2.0 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +1 Query: 385 YCKRIFPYFDKWRKAYGDTYLYWLRQRPALYVTDPELIREI 507 Y + F + ++ +K YG + + ++P L VTDPE+I+ + Sbjct: 52 YRRGFFTFDEECKKKYGKVWGIYDGRQPVLCVTDPEIIKAV 92
>CP341_MOUSE (Q9JMA7) Cytochrome P450 3A41 (EC 1.14.14.1)| Length = 504 Score = 30.8 bits (68), Expect = 2.6 Identities = 23/98 (23%), Positives = 38/98 (38%) Frame = +1 Query: 214 RVGDIFRRQGIDGPPPSSFLTGNLSEMXXXXXXXXXXXXXXXXXXSPWDLHKDGFDDYCK 393 R +F++QGI GP P FL L+ Y K Sbjct: 28 RTHGLFKKQGIPGPTPLPFLGTVLN--------------------------------YYK 55 Query: 394 RIFPYFDKWRKAYGDTYLYWLRQRPALYVTDPELIREI 507 ++ + + + YG T+ + Q P +TDPE+I+ + Sbjct: 56 GLWKFDMECYEKYGKTWGLFDGQMPLFVITDPEMIKNV 93
>TCMO_RUTGR (Q9AR74) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 506 Score = 30.4 bits (67), Expect = 3.4 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 15/63 (23%) Frame = +1 Query: 400 FPYFDKW---------------RKAYGDTYLYWLRQRPALYVTDPELIREIGRCVSLDMG 534 FP F W K +GD YL + QR + V+ PE+ +E+ ++ G Sbjct: 40 FPVFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFG 99 Query: 535 KPT 543 T Sbjct: 100 SRT 102
>FLLH_POPTR (O04064) Floricaula/leafy homolog (PTLF)| Length = 377 Score = 30.0 bits (66), Expect = 4.5 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 42 GERQGSQGKKGREREREDLDGPGEHG 119 GER+ G+K +R+ DLDG EHG Sbjct: 173 GERKKQSGRKKGQRKVVDLDGDDEHG 198
>C13A8_CAEEL (Q27516) Putative cytochrome P450 CYP13A8 (EC 1.14.-.-)| Length = 509 Score = 30.0 bits (66), Expect = 4.5 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +1 Query: 415 KWRKAYGDTYLYWLRQRPALYVTDPELIREI 507 KW K YG Y + + + ++DP+L++EI Sbjct: 54 KWTKEYGKIYGFTEGMQKVMVISDPDLVQEI 84
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 30.0 bits (66), Expect = 4.5 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 544 TSACPCQATRTGRSPGSAPGPSRTAPAAAGASTDMCP 434 +SA P +G PGS PGP+ T P A ++ P Sbjct: 129 SSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAP 165
>CELR3_MOUSE (Q91ZI0) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| Length = 3301 Score = 29.6 bits (65), Expect = 5.9 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = -2 Query: 547 GTSACPCQATRTGRSPGSAPGPSRTAP 467 G + P +A RT +PGSAP SRTAP Sbjct: 239 GEDSAP-RAVRTAPTPGSAPRESRTAP 264
>CELR3_RAT (O88278) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Multiple epidermal growth factor-like domains 2) Length = 3313 Score = 29.6 bits (65), Expect = 5.9 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = -2 Query: 547 GTSACPCQATRTGRSPGSAPGPSRTAP 467 G + P +A RT +PGSAP SRTAP Sbjct: 239 GEDSAP-RAVRTAPAPGSAPHESRTAP 264
>CP131_DROME (Q9VFJ0) Probable cytochrome P450 313a1 (EC 1.14.-.-)| (CYPCCCXIIIA1) Length = 492 Score = 29.3 bits (64), Expect = 7.7 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 Query: 391 KRIFPYFDKWRKAYGDTYLYWLRQRPALYVTDPELIREI 507 KR + K+ YG T L W+ P + DP+++ +I Sbjct: 52 KRKLSFRTKYLNKYGSTILTWMGPVPFIVTRDPKVVEDI 90
>CP3A6_RABIT (P11707) Cytochrome P450 3A6 (EC 1.14.14.1) (CYPIIIA6) (P450-3C)| Length = 501 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/42 (28%), Positives = 26/42 (61%) Frame = +1 Query: 382 DYCKRIFPYFDKWRKAYGDTYLYWLRQRPALYVTDPELIREI 507 +Y K I+ + + RK YG + + ++P + +TDP++I+ + Sbjct: 50 EYRKGIWDFDIECRKKYGKMWGLFDGRQPLMVITDPDMIKTV 91
>TSYL1_HUMAN (Q9H0U9) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 438 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -3 Query: 486 VRHVQRRPLPEPVQICVPVGF 424 VR +RRPL EPV+I P GF Sbjct: 415 VRRARRRPLREPVEIPRPFGF 435
>TCMO_SOYBN (Q42797) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 506 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 424 KAYGDTYLYWLRQRPALYVTDPELIREIGRCVSLDMGKPT 543 K +GD +L + QR + V+ PEL +E+ ++ G T Sbjct: 63 KKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRT 102
>TCMO_GLYEC (Q96423) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 424 KAYGDTYLYWLRQRPALYVTDPELIREIGRCVSLDMGKPT 543 K +GD +L + QR + V+ PEL +E+ ++ G T Sbjct: 63 KRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRT 102
>TCMO_CICAR (O81928) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 424 KAYGDTYLYWLRQRPALYVTDPELIREIGRCVSLDMGKPT 543 K +GD +L + QR + V+ PEL +E+ ++ G T Sbjct: 63 KRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRT 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,932,357 Number of Sequences: 219361 Number of extensions: 766068 Number of successful extensions: 4095 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3664 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4078 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
