ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart27g01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 298 tacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcacc 357 Query: 375 g 375 | Sbjct: 358 g 358
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 323 tacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcacc 382 Query: 375 g 375 | Sbjct: 383 g 383
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 89.7 bits (45), Expect = 6e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 266 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 325 Query: 375 g 375 | Sbjct: 326 g 326
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 89.7 bits (45), Expect = 6e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 254 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 313 Query: 375 g 375 | Sbjct: 314 g 314
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 89.7 bits (45), Expect = 6e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 375 g 375 | Sbjct: 315 g 315
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 89.7 bits (45), Expect = 6e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 375 g 375 | Sbjct: 315 g 315
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 85.7 bits (43), Expect = 1e-13 Identities = 162/199 (81%), Gaps = 2/199 (1%) Strand = Plus / Plus Query: 178 cgtcggcggacgcgtggctgcaccaggagttcgagacggagggcaacgtgcgggcgggct 237 ||||||||||| |||||||| || || ||||| |||||||||||||||||| |||| || Sbjct: 200 cgtcggcggactcgtggctgtacgagaagttcacgacggagggcaacgtgcgcgcggact 259 Query: 238 acgacgcgcgggggcggcaggtagcgtccatcgtcctcgac-cggcagtccggcggcgcc 296 || |||||| ||||| |||||| |||| | |||| ||| | |||||||||||||||| Sbjct: 260 acaacgcgcaggggcagcaggtgacgtctctgatcct-gacgcagcagtccggcggcgcc 318 Query: 297 ttccggacccggcgcagctacctctacggccagttcagcgtccagatgaagctcgtcccc 356 ||| | | |||| | ||||| ||||| |||||||| ||||||||| ||| |||| Sbjct: 319 ttcagctcgcggcagaagtacctgtacggggagttcagcatccagatgaggctgatcccg 378 Query: 357 ggcaactccgccggcaccg 375 ||||||||||| ||||||| Sbjct: 379 ggcaactccgcgggcaccg 397
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 253 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 312 Query: 374 cg 375 || Sbjct: 313 cg 314
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 258 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 317 Query: 374 cg 375 || Sbjct: 318 cg 319
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 8321926 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 8321985 Query: 374 cg 375 || Sbjct: 8321986 cg 8321987
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 249 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 308 Query: 374 cg 375 || Sbjct: 309 cg 310
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 62035 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 62094 Query: 374 cg 375 || Sbjct: 62095 cg 62096
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 258 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 317 Query: 374 cg 375 || Sbjct: 318 cg 319
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 253 ctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcac 312 Query: 374 cg 375 || Sbjct: 313 cg 314
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 81.8 bits (41), Expect = 1e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 259 tacctcttcggcgagttcagcgtccggatgaagctcgtcgacggcaactccgccggcacc 318 Query: 375 g 375 | Sbjct: 319 g 319
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgacgcc 380 ||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 28761548 cagatcaagctcgtccccggcaactccgccggcaccgtcgcc 28761589 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccg 375 ||||| ||||||||||||||||||||||||||||||| Sbjct: 28749768 cagatcaagctcgtccccggcaactccgccggcaccg 28749804 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 345 aagctcgtccccggcaactccgccggcaccg 375 ||||||||||||||||||||||||||||||| Sbjct: 28773893 aagctcgtccccggcaactccgccggcaccg 28773863
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgacgcc 380 ||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 69323 cagatcaagctcgtccccggcaactccgccggcaccgtcgcc 69364 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccg 375 ||||| ||||||||||||||||||||||||||||||| Sbjct: 57543 cagatcaagctcgtccccggcaactccgccggcaccg 57579 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 345 aagctcgtccccggcaactccgccggcaccg 375 ||||||||||||||||||||||||||||||| Sbjct: 81668 aagctcgtccccggcaactccgccggcaccg 81638
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgacgcc 380 ||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 162114 cagatcaagctcgtccccggcaactccgccggcaccgtcgcc 162155 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccg 375 ||||| ||||||||||||||||||||||||||||||| Sbjct: 150334 cagatcaagctcgtccccggcaactccgccggcaccg 150370
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccgacgcc 380 ||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 314 cagatcaagctcgtccccggcaactccgccggcaccgtcgcc 355
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccg 375 ||||| ||||||||||||||||||||||||||||||| Sbjct: 320 cagatcaagctcgtccccggcaactccgccggcaccg 356
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccg 375 ||||| ||||||||||||||||||||||||||||||| Sbjct: 214 cagatcaagctcgtccccggcaactccgccggcaccg 250
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccg 375 ||||| ||||||||||||||||||||||||||||||| Sbjct: 316 cagatcaagctcgtccccggcaactccgccggcaccg 352
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccg 375 ||||| ||||||||||||||||||||||||||||||| Sbjct: 316 cagatcaagctcgtccccggcaactccgccggcaccg 352
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||| |||||| ||||||||||| ||||||||||| ||| || ||||||||||||||| Sbjct: 294 tacctttacggcgagttcagcgtcgagatgaagctcatccgggggaactccgccggcacc 353 Query: 375 g 375 | Sbjct: 354 g 354
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 296 cttccggacccggcgcagctacctctacggccagttcagcgtccagatgaagctcgtccc 355 ||||| ||||||| || |||||||| |||||| |||||| | || || ||||||||| | Sbjct: 113264 cttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcgc 113323 Query: 356 cggcaactccgccggcaccg 375 |||| ||||||||||||||| Sbjct: 113324 cggcgactccgccggcaccg 113343
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 296 cttccggacccggcgcagctacctctacggccagttcagcgtccagatgaagctcgtccc 355 ||||| ||||||| || |||||||| |||||| |||||| | || || ||||||||| | Sbjct: 12883 cttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcgc 12942 Query: 356 cggcaactccgccggcaccg 375 |||| ||||||||||||||| Sbjct: 12943 cggcgactccgccggcaccg 12962
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 296 cttccggacccggcgcagctacctctacggccagttcagcgtccagatgaagctcgtccc 355 ||||| ||||||| || |||||||| |||||| |||||| | || || ||||||||| | Sbjct: 19010066 cttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcgc 19010125 Query: 356 cggcaactccgccggcaccg 375 |||| ||||||||||||||| Sbjct: 19010126 cggcgactccgccggcaccg 19010145 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gccgcgtgcgccgtcgccgt 145 |||||||||||||||||||| Sbjct: 26411423 gccgcgtgcgccgtcgccgt 26411442 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tcctccaagaagcagagcat 85 |||||||||||||||||||| Sbjct: 3814713 tcctccaagaagcagagcat 3814732
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 296 cttccggacccggcgcagctacctctacggccagttcagcgtccagatgaagctcgtccc 355 ||||| ||||||| || |||||||| |||||| |||||| | || || ||||||||| | Sbjct: 228 cttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcgc 287 Query: 356 cggcaactccgccggcaccg 375 |||| ||||||||||||||| Sbjct: 288 cggcgactccgccggcaccg 307
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 296 cttccggacccggcgcagctacctctacggccagttcagcgtccagatgaagctcgtccc 355 ||||| ||||||| || |||||||| |||||| |||||| | || || ||||||||| | Sbjct: 225 cttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcgc 284 Query: 356 cggcaactccgccggcaccg 375 |||| ||||||||||||||| Sbjct: 285 cggcgactccgccggcaccg 304
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 296 cttccggacccggcgcagctacctctacggccagttcagcgtccagatgaagctcgtccc 355 ||||| ||||||| || |||||||| |||||| |||||| | || || ||||||||| | Sbjct: 19168715 cttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcgc 19168774 Query: 356 cggcaactccgccggcaccg 375 |||| ||||||||||||||| Sbjct: 19168775 cggcgactccgccggcaccg 19168794 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gccgcgtgcgccgtcgccgt 145 |||||||||||||||||||| Sbjct: 26737274 gccgcgtgcgccgtcgccgt 26737293 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tcctccaagaagcagagcat 85 |||||||||||||||||||| Sbjct: 3823407 tcctccaagaagcagagcat 3823426
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccg 375 ||||||||||||||||||||||||||||||| Sbjct: 339 aagctcgtccccggcaactccgccggcaccg 369
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccg 375 ||||||||||||||||||||||||||||||| Sbjct: 329 aagctcgtccccggcaactccgccggcaccg 359
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 346 agctcgtccccggcaactccgccggcaccg 375 |||||||||||||||||||||||||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccg 10358934
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 346 agctcgtccccggcaactccgccggcaccg 375 |||||||||||||||||||||||||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccg 1356
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 346 agctcgtccccggcaactccgccggcaccg 375 |||||||||||||||||||||||||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccg 124744
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgc 367 ||||||| |||| |||||||||| |||||||||||||| |||||||||||| Sbjct: 154 tacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgc 206
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccg 375 ||||| ||| ||||||||||||||||||||||||||| Sbjct: 208 cagatcaagttcgtccccggcaactccgccggcaccg 244
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcacc 374 ||||||| |||| ||||| |||| ||||||||||||| ||||||||||||||||||| Sbjct: 242 tacctcttcggcgagttccaggtccggatgaagctcgtcgacggcaactccgccggcacc 301 Query: 375 g 375 | Sbjct: 302 g 302
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgc 367 ||||||| |||| |||||||||| |||||||||||||| |||||||||||| Sbjct: 327 tacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgc 379
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 56.0 bits (28), Expect = 9e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 296 cttccggacccggcgcagctacctctacggccagttcagcgtccagatgaagctcgtccc 355 ||||| ||||||| || |||||||| |||||| |||||| | || || ||||||||| Sbjct: 238 cttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcgg 297 Query: 356 cggcaactccgccggcaccg 375 |||| ||||||||||||||| Sbjct: 298 cggcgactccgccggcaccg 317
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccg 375 |||||||||||||||||||| |||||||||| Sbjct: 265 aagctcgtccccggcaactctgccggcaccg 295
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 315 tacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 ||||||| |||| ||||| ||| |||||||||||||| |||||||||||||||||| Sbjct: 251 tacctcttcggcgagttcgaggtcaagatgaagctcgtcgacggcaactccgccggcac 309
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 296 cttccggacccggcgcagctacctctacggccagttcagcgtccagatgaagctcgtccc 355 ||||| ||||||| || |||||||| |||||| |||||| | || || ||||||||| Sbjct: 277 cttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcgg 336 Query: 356 cggcaactccgccggcac 373 |||| ||||||||||||| Sbjct: 337 cggcgactccgccggcac 354
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 314 ctacctctacggccagttcagcgtccagatgaagctcgtccccggcaactccgccggcac 373 |||||||| |||||| |||||| | || |||||||||||| |||| ||||||| ||||| Sbjct: 266 ctacctcttcggccacttcagcatgcacatgaagctcgtcggcggcgactccgcgggcac 325 Query: 374 cg 375 || Sbjct: 326 cg 327
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 317 cctctacggccagttcagcgtccagatgaagctcgtccccggc 359 ||||| |||| |||||||| | |||||||||||||||||||| Sbjct: 243 cctcttcggcgagttcagcatggagatgaagctcgtccccggc 285
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Minus Query: 317 cctctacggccagttcagcgtccagatgaagctcgtccccggc 359 ||||| |||| |||||||| | |||||||||||||||||||| Sbjct: 32962 cctcttcggcgagttcagcatggagatgaagctcgtccccggc 32920
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Minus Query: 317 cctctacggccagttcagcgtccagatgaagctcgtccccggc 359 ||||| |||| |||||||| | |||||||||||||||||||| Sbjct: 30557254 cctcttcggcgagttcagcatggagatgaagctcgtccccggc 30557212 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 23556696 ctggcggcagcggcgtcgtcgtcg 23556719
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 317 cctctacggccagttcagcgtccagatgaagctcgtccccggc 359 ||||| |||| |||||||| | |||||||||||||||||||| Sbjct: 311 cctcttcggcgagttcagcatggagatgaagctcgtccccggc 353
>ref|XM_517882.1| PREDICTED: Pan troglodytes similar to small conductance calcium-activated potassium channel protein 2 isoform a; apamin-sensitive small-conductance Ca2+-activated potassium channel (LOC462006), mRNA Length = 2181 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 284 ccggcggcgccttccggacccg 305
>ref|NM_021614.2| Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (KCNN2), transcript variant 1, mRNA Length = 2515 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 105 ccggcggcgccttccggacccg 126
>ref|XM_844161.1| PREDICTED: Canis familiaris similar to Small conductance calcium-activated potassium channel protein 2 (SK2), transcript variant 2 (LOC474640), mRNA Length = 2708 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 302 ccggcggcgccttccggacccg 323
>gb|AC121957.2| Mus musculus BAC clone RP24-232G13 from 18, complete sequence Length = 178929 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 61458 ccggcggcgccttccggacccg 61437
>dbj|AK149082.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120481N10 product:potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, full insert sequence Length = 2560 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 351 ccggcggcgccttccggacccg 372
>gb|AC093527.2| Homo sapiens chromosome 5 clone RP11-252A23, complete sequence Length = 191035 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 44690 ccggcggcgccttccggacccg 44669
>dbj|AK087908.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330039K23 product:potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, full insert sequence Length = 1971 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 7 ccggcggcgccttccggacccg 28
>dbj|AK039033.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230088J22 product:potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, full insert sequence Length = 2848 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 349 ccggcggcgccttccggacccg 370
>dbj|AK033158.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030448K18 product:potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, full insert sequence Length = 3691 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 1167 ccggcggcgccttccggacccg 1188
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 343 tgaagctcgtccccggcaactc 364 |||||||||||||||||||||| Sbjct: 467 tgaagctcgtccccggcaactc 488
>gb|AC025761.5|AC025761 Homo sapiens chromosome 5 clone CTB-109C23, complete sequence Length = 112944 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 49045 ccggcggcgccttccggacccg 49066
>gb|AF239613.1|AF239613 Homo sapiens apamin-sensitive small-conductance Ca2+-activated potassium channel (KCNN2) mRNA, complete cds Length = 2510 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 ccggcggcgccttccggacccg 307 |||||||||||||||||||||| Sbjct: 105 ccggcggcgccttccggacccg 126
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 268 tcgtcctcgaccggcagtccggcggc 293 ||||||||||||||||| |||||||| Sbjct: 8774793 tcgtcctcgaccggcagcccggcggc 8774818
>dbj|AB070941.1| Streptomyces avermitilis polyketide-1 biosynthetic gene cluster Length = 24045 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 268 tcgtcctcgaccggcagtccggcggc 293 ||||||||||||||||| |||||||| Sbjct: 785 tcgtcctcgaccggcagcccggcggc 810
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 cgaccggcagtccggcggcgc 295 ||||||||||||||||||||| Sbjct: 1253673 cgaccggcagtccggcggcgc 1253653
>emb|CR702150.2|CNS0G4QA Tetraodon nigroviridis full-length cDNA Length = 1091 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gccctgctggcggcagtggcg 173 ||||||||||||||||||||| Sbjct: 538 gccctgctggcggcagtggcg 518
>emb|CR701638.2|CNS0G4C2 Tetraodon nigroviridis full-length cDNA Length = 1110 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gccctgctggcggcagtggcg 173 ||||||||||||||||||||| Sbjct: 551 gccctgctggcggcagtggcg 531
>emb|CR701623.2|CNS0G4BN Tetraodon nigroviridis full-length cDNA Length = 1109 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 gccctgctggcggcagtggcg 173 ||||||||||||||||||||| Sbjct: 553 gccctgctggcggcagtggcg 533
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 accggcagtccggcggcgccttccg 301 |||||||| |||||||||||||||| Sbjct: 334274 accggcaggccggcggcgccttccg 334250
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 339 cagatgaagctcgtccccggcaactccgccggcaccg 375 ||||| ||| ||||||| || |||||||||||||||| Sbjct: 320 cagatcaaggtcgtccctggtaactccgccggcaccg 356
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 gcggcagtggcgtcgtcgtcg 182 ||||||||||||||||||||| Sbjct: 1850827 gcggcagtggcgtcgtcgtcg 1850847
>gb|AY834935.1| Hepatitis C virus isolate km43 NS5b protein gene, partial cds Length = 375 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 262 ggccctgctggcggcagtggc 242
>gb|AY834934.1| Hepatitis C virus isolate km51 NS5b protein gene, partial cds Length = 375 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 262 ggccctgctggcggcagtggc 242
>gb|AY834933.1| Hepatitis C virus isolate km5 NS5b protein gene, partial cds Length = 375 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 262 ggccctgctggcggcagtggc 242
>gb|AY834932.1| Hepatitis C virus isolate km50 NS5b protein gene, partial cds Length = 375 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 262 ggccctgctggcggcagtggc 242
>gb|AY834931.1| Hepatitis C virus isolate km47 NS5b protein gene, partial cds Length = 375 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 262 ggccctgctggcggcagtggc 242
>dbj|D14199.1|HPCNS5A17 Hepatitis C virus gene for NS5, partial cds, isolate NE137 Length = 337 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 238 ggccctgctggcggcagtggc 218
>dbj|D16617.1|HPCNE137F Hepatitis C virus RNA for NS5, partial sequence Length = 1141 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggccctgctggcggcagtggc 172 ||||||||||||||||||||| Sbjct: 235 ggccctgctggcggcagtggc 215
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgcgtgcgccgtcgccgtgg 147 |||||||||||||||||||| Sbjct: 3089551 cgcgtgcgccgtcgccgtgg 3089532
>ref|XM_472832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2280 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 1102 ctggcggcagcggcgtcgtcgtcg 1079
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ctcgaccggcagtccggcgg 292 |||||||||||||||||||| Sbjct: 5119796 ctcgaccggcagtccggcgg 5119777
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tcctccaagaagcagagcat 85 |||||||||||||||||||| Sbjct: 182385 tcctccaagaagcagagcat 182404
>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0004D06, complete sequence Length = 157547 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gccgcgtgcgccgtcgccgt 145 |||||||||||||||||||| Sbjct: 124848 gccgcgtgcgccgtcgccgt 124867
>gb|AF448724.1| Sinorhizobium meliloti phage PBC5, complete genome Length = 57416 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tgctcggccgccgcgcgcat 28 |||||||||||||||||||| Sbjct: 35427 tgctcggccgccgcgcgcat 35446
>gb|AC108947.5| Mus musculus BAC clone RP23-140A11 from chromosome 13, complete sequence Length = 187401 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ttcctcagcctgcaccatcc 110 |||||||||||||||||||| Sbjct: 173061 ttcctcagcctgcaccatcc 173080
>ref|XM_809293.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511239.30) partial mRNA Length = 2499 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ccggcagtccggcggcgcct 297 |||||||||||||||||||| Sbjct: 322 ccggcagtccggcggcgcct 303
>ref|XM_813068.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506605.40) partial mRNA Length = 2499 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ccggcagtccggcggcgcct 297 |||||||||||||||||||| Sbjct: 322 ccggcagtccggcggcgcct 303
>gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome 6, complete sequence Length = 222535 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ttcctcagcctgcaccatcc 110 |||||||||||||||||||| Sbjct: 27778 ttcctcagcctgcaccatcc 27759
>emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chromosome 10 Contains the HHEX gene for hematopoietically expressed homeobox, the 5' end of the gene for SEC15 (S. cerevisiae)-like (SEC15L), a eukaryotic translation initiation factor 2 subunit 2 (eIF-2-beta) pseudogene and four CpG islands, complete sequence Length = 190144 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tggcgcgccgggctgccgcg 131 |||||||||||||||||||| Sbjct: 184722 tggcgcgccgggctgccgcg 184741
>emb|AL445605.7| Human DNA sequence from clone RP11-335D7 on chromosome 13, complete sequence Length = 45291 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ctgcaccaggagttcgagac 214 |||||||||||||||||||| Sbjct: 17146 ctgcaccaggagttcgagac 17165
>gb|AY341851.1| Oryza sativa (japonica cultivar-group) WRKY10 mRNA, complete cds Length = 2531 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 1129 ctggcggcagcggcgtcgtcgtcg 1106
>gb|AY341843.1| Oryza sativa (japonica cultivar-group) WRKY2 mRNA, complete cds Length = 3152 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 1839 ctggcggcagcggcgtcgtcgtcg 1816
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 cgtggacgtggccctgctgg 162 |||||||||||||||||||| Sbjct: 210214 cgtggacgtggccctgctgg 210233
>gb|AC022389.9| Homo sapiens chromosome 10 clone RP11-124L5, complete sequence Length = 198481 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ttcctcagcctgcaccatcc 110 |||||||||||||||||||| Sbjct: 124287 ttcctcagcctgcaccatcc 124306
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ccctgctggcggcagtggcg 173 |||||||||||||||||||| Sbjct: 337180 ccctgctggcggcagtggcg 337161
>tpg|BK005038.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 35 (WRKY35) gene, complete cds Length = 3290 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 1930 ctggcggcagcggcgtcgtcgtcg 1907
>gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188768 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ttcctcagcctgcaccatcc 110 |||||||||||||||||||| Sbjct: 144681 ttcctcagcctgcaccatcc 144662
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 gaagctcgtccccggcaactccgc 367 |||||||||||| ||||||||||| Sbjct: 7 gaagctcgtcccgggcaactccgc 30
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 cgtggacgtggccctgctgg 162 |||||||||||||||||||| Sbjct: 2175031 cgtggacgtggccctgctgg 2175050
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgacgcc 380 ||||||||||| || ||||||||||||||| |||| Sbjct: 333 aagctcgtcccgggggactccgccggcaccgtcgcc 368
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgacgcc 380 ||||||||||| || ||||||||||||||| |||| Sbjct: 223 aagctcgtcccgggggactccgccggcaccgtcgcc 258
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 345 aagctcgtccccggcaactccgccggcaccgacgcc 380 ||||||||||| || ||||||||||||||| |||| Sbjct: 340 aagctcgtcccgggggactccgccggcaccgtcgcc 375
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ctggcggcagtggcgtcgtcgtcg 182 |||||||||| ||||||||||||| Sbjct: 112599 ctggcggcagcggcgtcgtcgtcg 112622
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 tcggcggacgcgtggctgcaccaggagt 207 |||||| ||||||||||||||| ||||| Sbjct: 1215247 tcggcgaacgcgtggctgcaccgggagt 1215220 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,728,004 Number of Sequences: 3902068 Number of extensions: 2728004 Number of successful extensions: 242155 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 240874 Number of HSP's gapped (non-prelim): 1281 length of query: 382 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 360 effective length of database: 17,147,199,772 effective search space: 6172991917920 effective search space used: 6172991917920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
