ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart27f08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055F21, full insert sequence Length = 2914 Score = 660 bits (333), Expect = 0.0 Identities = 519/581 (89%) Strand = Plus / Plus Query: 3 atcagaatgaacaagaccgtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtct 62 ||||||||||||||| |||||||| ||| || |||| |||||||||||||| |||||| Sbjct: 384 atcagaatgaacaaggttgtcaggaagaacctgagagtacgacttggtgatgtcgtgtct 443 Query: 63 gttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgac 122 ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 444 gttcatcaatgcccagatgtcaaatacggcaagcgtgtgcacatacttccaattgatgat 503 Query: 123 acagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttccttgaa 182 || ||||| ||||| || ||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 504 actgttgagggcatcaccggaaacttgtttgatgccttcctgaaaccgtacttccttgaa 563 Query: 183 gcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagtgtg 242 || ||||||||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 564 gcataccgtcctttgaggaaaggagaccttttccttgttaggggtgggatgagaagtgtt 623 Query: 243 gaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacactgag 302 |||||||||||||||||||| |||||||||||||| ||||| |||||||| || || ||| Sbjct: 624 gaattcaaagttatagagactgaccctgcagagtactgcattgttgcacctgatacggag 683 Query: 303 atattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgttggc 362 ||||||||||||||||||||| ||||||||||||||||||| || ||||| || ||||| Sbjct: 684 atattctgtgatggtgagcctattaagagggaggatgaggaaagacttgatgaagttggt 743 Query: 363 tatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaactc 422 || |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||| Sbjct: 744 tacgatgatgttggtggagttaggaagcagatggcccaaatcagagaacttgttgagctc 803 Query: 423 ccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcatattg 482 ||| |||| || || || ||||||||||||||||| ||||||||||||||||||||| || Sbjct: 804 ccattgcgccatccccaacttttcaagtctattggtgtgaagcctccaaagggcatactg 863 Query: 483 ctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaaca 542 || | ||| || ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 864 ctttatggaccccctggctctggaaagaccctcattgctagagctgttgctaatgaaaca 923 Query: 543 ggtgcattcttctttctgatcaatggcccagaaattatgtc 583 ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 924 ggtgctttcttctttctgattaatggcccggagattatgtc 964
>dbj|AK099712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G14, full insert sequence Length = 2680 Score = 660 bits (333), Expect = 0.0 Identities = 519/581 (89%) Strand = Plus / Plus Query: 3 atcagaatgaacaagaccgtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtct 62 ||||||||||||||| |||||||| ||| || |||| |||||||||||||| |||||| Sbjct: 384 atcagaatgaacaaggttgtcaggaagaacctgagagtacgacttggtgatgtcgtgtct 443 Query: 63 gttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgac 122 ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 444 gttcatcaatgcccagatgtcaaatacggcaagcgtgtgcacatacttccaattgatgat 503 Query: 123 acagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttccttgaa 182 || ||||| ||||| || ||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 504 actgttgagggcatcaccggaaacttgtttgatgccttcctgaaaccgtacttccttgaa 563 Query: 183 gcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagtgtg 242 || ||||||||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 564 gcataccgtcctttgaggaaaggagaccttttccttgttaggggtgggatgagaagtgtt 623 Query: 243 gaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacactgag 302 |||||||||||||||||||| |||||||||||||| ||||| |||||||| || || ||| Sbjct: 624 gaattcaaagttatagagactgaccctgcagagtactgcattgttgcacctgatacggag 683 Query: 303 atattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgttggc 362 ||||||||||||||||||||| ||||||||||||||||||| || ||||| || ||||| Sbjct: 684 atattctgtgatggtgagcctattaagagggaggatgaggaaagacttgatgaagttggt 743 Query: 363 tatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaactc 422 || |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||| Sbjct: 744 tacgatgatgttggtggagttaggaagcagatggcccaaatcagagaacttgttgagctc 803 Query: 423 ccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcatattg 482 ||| |||| || || || ||||||||||||||||| ||||||||||||||||||||| || Sbjct: 804 ccattgcgccatccccaacttttcaagtctattggtgtgaagcctccaaagggcatactg 863 Query: 483 ctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaaca 542 || | ||| || ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 864 ctttatggaccccctggctctggaaagaccctcattgctagagctgttgctaatgaaaca 923 Query: 543 ggtgcattcttctttctgatcaatggcccagaaattatgtc 583 ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 924 ggtgctttcttctttctgattaatggcccggagattatgtc 964
>dbj|AK098874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D04, full insert sequence Length = 2685 Score = 660 bits (333), Expect = 0.0 Identities = 519/581 (89%) Strand = Plus / Plus Query: 3 atcagaatgaacaagaccgtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtct 62 ||||||||||||||| |||||||| ||| || |||| |||||||||||||| |||||| Sbjct: 384 atcagaatgaacaaggttgtcaggaagaacctgagagtacgacttggtgatgtcgtgtct 443 Query: 63 gttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgac 122 ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 444 gttcatcaatgcccagatgtcaaatacggcaagcgtgtgcacatacttccaattgatgat 503 Query: 123 acagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttccttgaa 182 || ||||| ||||| || ||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 504 actgttgagggcatcaccggaaacttgtttgatgccttcctgaaaccgtacttccttgaa 563 Query: 183 gcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagtgtg 242 || ||||||||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 564 gcataccgtcctttgaggaaaggagaccttttccttgttaggggtgggatgagaagtgtt 623 Query: 243 gaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacactgag 302 |||||||||||||||||||| |||||||||||||| ||||| |||||||| || || ||| Sbjct: 624 gaattcaaagttatagagactgaccctgcagagtactgcattgttgcacctgatacggag 683 Query: 303 atattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgttggc 362 ||||||||||||||||||||| ||||||||||||||||||| || ||||| || ||||| Sbjct: 684 atattctgtgatggtgagcctattaagagggaggatgaggaaagacttgatgaagttggt 743 Query: 363 tatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaactc 422 || |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||| Sbjct: 744 tacgatgatgttggtggagttaggaagcagatggcccaaatcagagaacttgttgagctc 803 Query: 423 ccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcatattg 482 ||| |||| || || || ||||||||||||||||| ||||||||||||||||||||| || Sbjct: 804 ccattgcgccatccccaacttttcaagtctattggtgtgaagcctccaaagggcatactg 863 Query: 483 ctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaaca 542 || | ||| || ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 864 ctttatggaccccctggctctggaaagaccctcattgctagagctgttgctaatgaaaca 923 Query: 543 ggtgcattcttctttctgatcaatggcccagaaattatgtc 583 ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 924 ggtgctttcttctttctgattaatggcccggagattatgtc 964
>dbj|AK099889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O07, full insert sequence Length = 2685 Score = 652 bits (329), Expect = 0.0 Identities = 518/581 (89%) Strand = Plus / Plus Query: 3 atcagaatgaacaagaccgtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtct 62 ||||||||||||||| |||||||| ||| || |||| |||||||||||||| |||||| Sbjct: 384 atcagaatgaacaaggttgtcaggaagaacctgagagtacgacttggtgatgtcgtgtct 443 Query: 63 gttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgac 122 ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 444 gttcatcaatgcccagatgtcaaatacggcaagcgtgtgcacatacttccaattgatgat 503 Query: 123 acagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttccttgaa 182 || ||||| ||||| || ||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 504 actgttgagggcatcaccggaaacttgtttgatgccttcctgaaaccgtacttccttgaa 563 Query: 183 gcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagtgtg 242 || ||||||||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 564 gcataccgtcctttgaggaaaggagaccttttccttgttaggggtgggatgagaagtgtt 623 Query: 243 gaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacactgag 302 |||||||||||||||||||| |||||||||||||| ||||| |||||||| || || ||| Sbjct: 624 gaattcaaagttatagagactgaccctgcagagtactgcattgttgcacctgatacggag 683 Query: 303 atattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgttggc 362 ||||||||||||||||||||| ||||||||||||||||||| || ||||| || ||||| Sbjct: 684 atattctgtgatggtgagcctattaagagggaggatgaggaaagacttgatgaagttggt 743 Query: 363 tatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaactc 422 || |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||| Sbjct: 744 tacgatgatgttggtggagttaggaagcagatggcccaaatcagagaacttgttgagctc 803 Query: 423 ccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcatattg 482 ||| |||| || || || ||||||||||||||||| ||||||||||| ||||||||| || Sbjct: 804 ccattgcgccatccccaacttttcaagtctattggtgtgaagcctccgaagggcatactg 863 Query: 483 ctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaaca 542 || | ||| || ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 864 ctttatggaccccctggctctggaaagaccctcattgctagagctgttgctaatgaaaca 923 Query: 543 ggtgcattcttctttctgatcaatggcccagaaattatgtc 583 ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 924 ggtgctttcttctttctgattaatggcccggagattatgtc 964
>dbj|AK098980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N05, full insert sequence Length = 2701 Score = 652 bits (329), Expect = 0.0 Identities = 518/581 (89%) Strand = Plus / Plus Query: 3 atcagaatgaacaagaccgtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtct 62 ||||||||||||||| |||||||| ||| || |||| |||||||||||||| |||||| Sbjct: 384 atcagaatgaacaaggttgtcaggaagaacctgagagtacgacttggtgatgtcgtgtct 443 Query: 63 gttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgac 122 ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 444 gttcatcaatgcccagatgtcaaatacggcaagcgtgtgcacatacttccaattgatgat 503 Query: 123 acagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttccttgaa 182 || ||||| ||||| || ||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 504 actgttgagggcatcaccggaaacttgtttgatgccttcctgaaaccgtacttccttgaa 563 Query: 183 gcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagtgtg 242 || ||||||||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 564 gcataccgtcctttgaggaaaggagaccttttccttgttaggggtgggatgagaagtgtt 623 Query: 243 gaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacactgag 302 |||||||||||||||||||| |||||||||||||| ||||| |||||||| || || ||| Sbjct: 624 gaattcaaagttatagagactgaccctgcagagtactgcattgttgcacctgatacggag 683 Query: 303 atattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgttggc 362 ||||||||||||||||||||| ||||||||||||||||||| || ||||| || ||||| Sbjct: 684 atattctgtgatggtgagcctattaagagggaggatgaggaaagacttgatgaagttggt 743 Query: 363 tatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaactc 422 || |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||| Sbjct: 744 tacgatgatgttggtggagttaggaagcagatggcccaaatcagagaacttgttgagctc 803 Query: 423 ccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcatattg 482 ||| |||| || || || ||||||||||||||||| ||||||||||| ||||||||| || Sbjct: 804 ccattgcgccatccccaacttttcaagtctattggtgtgaagcctccgaagggcatactg 863 Query: 483 ctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaaca 542 || | ||| || ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 864 ctttatggaccccctggctctggaaagaccctcattgctagagctgttgctaatgaaaca 923 Query: 543 ggtgcattcttctttctgatcaatggcccagaaattatgtc 583 ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 924 ggtgctttcttctttctgattaatggcccggagattatgtc 964
>dbj|AK064955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A05, full insert sequence Length = 2685 Score = 652 bits (329), Expect = 0.0 Identities = 518/581 (89%) Strand = Plus / Plus Query: 3 atcagaatgaacaagaccgtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtct 62 ||||||||||||||| |||||||| ||| || |||| |||||||||||||| |||||| Sbjct: 384 atcagaatgaacaaggttgtcaggaagaacctgagagtacgacttggtgatgtcgtgtct 443 Query: 63 gttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgac 122 ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 444 gttcatcaatgcccagatgtcaaatacggcaagcgtgtgcacatacttccaattgatgat 503 Query: 123 acagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttccttgaa 182 || ||||| ||||| || ||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 504 actgttgagggcatcaccggaaacttgtttgatgccttcctgaaaccgtacttccttgaa 563 Query: 183 gcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagtgtg 242 || ||||||||||| ||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 564 gcataccgtcctttgaggaaaggagaccttttccttgttaggggtgggatgagaagtgtt 623 Query: 243 gaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacactgag 302 |||||||||||||||||||| |||||||||||||| ||||| |||||||| || || ||| Sbjct: 624 gaattcaaagttatagagactgaccctgcagagtactgcattgttgcacctgatacggag 683 Query: 303 atattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgttggc 362 ||||||||||||||||||||| ||||||||||||||||||| || ||||| || ||||| Sbjct: 684 atattctgtgatggtgagcctattaagagggaggatgaggaaagacttgatgaagttggt 743 Query: 363 tatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaactc 422 || |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||| Sbjct: 744 tacgatgatgttggtggagttaggaagcagatggcccaaatcagagaacttgttgagctc 803 Query: 423 ccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcatattg 482 ||| |||| || || || ||||||||||||||||| ||||||||||||||||||| | || Sbjct: 804 ccattgcgccatccccaacttttcaagtctattggtgtgaagcctccaaagggcaaactg 863 Query: 483 ctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaaca 542 || | ||| || ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 864 ctttatggaccccctggctctggaaagaccctcattgctagagctgttgctaatgaaaca 923 Query: 543 ggtgcattcttctttctgatcaatggcccagaaattatgtc 583 ||||| |||||||||||||| |||||||| || |||||||| Sbjct: 924 ggtgctttcttctttctgattaatggcccggagattatgtc 964
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 478 bits (241), Expect = e-131 Identities = 370/413 (89%) Strand = Plus / Minus Query: 171 tacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggagga 230 |||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 2836758 tacttccttgaagcataccgtcctttgaggaaaggagaccttttccttgttaggggtggg 2836699 Query: 231 atgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgca 290 ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 2836698 atgagaagtgttgaattcaaagttatagagactgaccctgcagagtactgcattgttgca 2836639 Query: 291 cccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggagaggctt 350 || || || |||||||||||||||||||||||| ||||||||||||||||||| || ||| Sbjct: 2836638 cctgatacggagatattctgtgatggtgagcctattaagagggaggatgaggaaagactt 2836579 Query: 351 gacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaa 410 || || ||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2836578 gatgaagttggttacgatgatgttggtggagttaggaagcagatggcccaaatcagagaa 2836519 Query: 411 ctggttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctcca 470 || ||||| |||||| |||| || || || ||||||||||||||||| |||||||||||| Sbjct: 2836518 cttgttgagctcccattgcgccatccccaacttttcaagtctattggtgtgaagcctcca 2836459 Query: 471 aagggcatattgctgtttggtccacctggctctggcaagacccttattgctagagctgtt 530 ||||||||| |||| | ||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 2836458 aagggcatactgctttatggaccccctggctctggaaagaccctcattgctagagctgtt 2836399 Query: 531 gccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatgtc 583 || |||||||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 2836398 gctaatgaaacaggtgctttcttctttctgattaatggcccggagattatgtc 2836346 Score = 186 bits (94), Expect = 6e-44 Identities = 148/166 (89%) Strand = Plus / Minus Query: 3 atcagaatgaacaagaccgtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtct 62 ||||||||||||||| |||||||| ||| || |||| |||||||||||||| |||||| Sbjct: 2837260 atcagaatgaacaaggttgtcaggaagaacctgagagtacgacttggtgatgtcgtgtct 2837201 Query: 63 gttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgac 122 ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 2837200 gttcatcaatgcccagatgtcaaatacggcaagcgtgtgcacatacttccaattgatgat 2837141 Query: 123 acagttgaaggcattactggaaacttgtttgatgccttcttgaaac 168 || ||||| ||||| || ||||||||||||||||||||| |||||| Sbjct: 2837140 actgttgagggcatcaccggaaacttgtttgatgccttcctgaaac 2837095
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 478 bits (241), Expect = e-131 Identities = 370/413 (89%) Strand = Plus / Minus Query: 171 tacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggagga 230 |||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 2836869 tacttccttgaagcataccgtcctttgaggaaaggagaccttttccttgttaggggtggg 2836810 Query: 231 atgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgca 290 ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 2836809 atgagaagtgttgaattcaaagttatagagactgaccctgcagagtactgcattgttgca 2836750 Query: 291 cccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggagaggctt 350 || || || |||||||||||||||||||||||| ||||||||||||||||||| || ||| Sbjct: 2836749 cctgatacggagatattctgtgatggtgagcctattaagagggaggatgaggaaagactt 2836690 Query: 351 gacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaa 410 || || ||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2836689 gatgaagttggttacgatgatgttggtggagttaggaagcagatggcccaaatcagagaa 2836630 Query: 411 ctggttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctcca 470 || ||||| |||||| |||| || || || ||||||||||||||||| |||||||||||| Sbjct: 2836629 cttgttgagctcccattgcgccatccccaacttttcaagtctattggtgtgaagcctcca 2836570 Query: 471 aagggcatattgctgtttggtccacctggctctggcaagacccttattgctagagctgtt 530 ||||||||| |||| | ||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 2836569 aagggcatactgctttatggaccccctggctctggaaagaccctcattgctagagctgtt 2836510 Query: 531 gccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatgtc 583 || |||||||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 2836509 gctaatgaaacaggtgctttcttctttctgattaatggcccggagattatgtc 2836457 Score = 186 bits (94), Expect = 6e-44 Identities = 148/166 (89%) Strand = Plus / Minus Query: 3 atcagaatgaacaagaccgtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtct 62 ||||||||||||||| |||||||| ||| || |||| |||||||||||||| |||||| Sbjct: 2837371 atcagaatgaacaaggttgtcaggaagaacctgagagtacgacttggtgatgtcgtgtct 2837312 Query: 63 gttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgac 122 ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 2837311 gttcatcaatgcccagatgtcaaatacggcaagcgtgtgcacatacttccaattgatgat 2837252 Query: 123 acagttgaaggcattactggaaacttgtttgatgccttcttgaaac 168 || ||||| ||||| || ||||||||||||||||||||| |||||| Sbjct: 2837251 actgttgagggcatcaccggaaacttgtttgatgccttcctgaaac 2837206
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 478 bits (241), Expect = e-131 Identities = 370/413 (89%) Strand = Plus / Minus Query: 171 tacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggagga 230 |||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 108714 tacttccttgaagcataccgtcctttgaggaaaggagaccttttccttgttaggggtggg 108655 Query: 231 atgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgca 290 ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 108654 atgagaagtgttgaattcaaagttatagagactgaccctgcagagtactgcattgttgca 108595 Query: 291 cccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggagaggctt 350 || || || |||||||||||||||||||||||| ||||||||||||||||||| || ||| Sbjct: 108594 cctgatacggagatattctgtgatggtgagcctattaagagggaggatgaggaaagactt 108535 Query: 351 gacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaa 410 || || ||||| || |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 108534 gatgaagttggttacgatgatgttggtggagttaggaagcagatggcccaaatcagagaa 108475 Query: 411 ctggttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctcca 470 || ||||| |||||| |||| || || || ||||||||||||||||| |||||||||||| Sbjct: 108474 cttgttgagctcccattgcgccatccccaacttttcaagtctattggtgtgaagcctcca 108415 Query: 471 aagggcatattgctgtttggtccacctggctctggcaagacccttattgctagagctgtt 530 ||||||||| |||| | ||| || ||||||||||| |||||||| ||||||||||||||| Sbjct: 108414 aagggcatactgctttatggaccccctggctctggaaagaccctcattgctagagctgtt 108355 Query: 531 gccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatgtc 583 || |||||||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 108354 gctaatgaaacaggtgctttcttctttctgattaatggcccggagattatgtc 108302 Score = 186 bits (94), Expect = 6e-44 Identities = 148/166 (89%) Strand = Plus / Minus Query: 3 atcagaatgaacaagaccgtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtct 62 ||||||||||||||| |||||||| ||| || |||| |||||||||||||| |||||| Sbjct: 109216 atcagaatgaacaaggttgtcaggaagaacctgagagtacgacttggtgatgtcgtgtct 109157 Query: 63 gttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgac 122 ||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 109156 gttcatcaatgcccagatgtcaaatacggcaagcgtgtgcacatacttccaattgatgat 109097 Query: 123 acagttgaaggcattactggaaacttgtttgatgccttcttgaaac 168 || ||||| ||||| || ||||||||||||||||||||| |||||| Sbjct: 109096 actgttgagggcatcaccggaaacttgtttgatgccttcctgaaac 109051
>ref|NM_196705.1| Oryza sativa (japonica cultivar-group) putative endoplasmic reticulum membrane fusion protein (OSJNBa0046P18.14), mRNA Length = 2454 Score = 474 bits (239), Expect = e-130 Identities = 482/563 (85%) Strand = Plus / Plus Query: 21 gtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtctgttcaccaatgcccagac 80 |||||||| ||| || | ||||||||||||||||| || ||||| ||||| |||| || Sbjct: 283 gtcaggaagaacctgagggtgcgacttggtgatgttgtttctgtccaccagtgccaggat 342 Query: 81 gtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttgaaggcattact 140 ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 343 gtgaaatacgggaaacgtgtgcacattcttccgattgatgatacagttgaaggcattacc 402 Query: 141 ggaaacttgtttgatgccttcttgaaaccatacttccttgaagcttaccgtcctttaagg 200 || ||| |||||||||||||| |||| ||||||||| | ||||| ||||| || | ||| Sbjct: 403 gggaacctgtttgatgccttcctgaagccatacttcttagaagcataccgcccagtgagg 462 Query: 201 aagggagatcttttccttgtgaggggaggaatgagaagtgtggaattcaaagttatagag 260 || |||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 463 aaaggagatctcttccttgtcaggggtggaatgagaagtgtggaattcaaagtcatagag 522 Query: 261 acagaccctgcagagtattgcatcgttgcacccgacactgagatattctgtgatggtgag 320 || |||||| | |||||||||||||||||||| || || || |||||||||||||| ||| Sbjct: 523 actgaccctactgagtattgcatcgttgcaccagatacagaaatattctgtgatggggag 582 Query: 321 cctgttaagagggaggatgaggagaggcttgacgatgttggctatgatgatgttggtgga 380 ||| |||||||||| |||||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 583 cctattaagagggaagatgaggaaaggcttgatgaggttggatatgatgatgttggtgga 642 Query: 381 gttaggaagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccctcag 440 ||||| ||||| ||||| || |||||||| || ||||| || ||||||||||| || || Sbjct: 643 gttagaaagcagatggctcaaatcagagagcttgttgagcttccactgcgtcatccccaa 702 Query: 441 cttttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacctggc 500 |||||||| || ||||| |||||||| ||||||||||||||||||| ||| |||||||| Sbjct: 703 cttttcaaatccattggtgtgaagccaccaaagggcatattgctgtatggaccacctggt 762 Query: 501 tctggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctg 560 ||||| || ||||| |||||| | |||||||| ||||| || || || || |||||| || Sbjct: 763 tctggaaaaaccctcattgctcgtgctgttgcaaatgagactggagcctttttctttttg 822 Query: 561 atcaatggcccagaaattatgtc 583 || ||||| || || |||||||| Sbjct: 823 attaatggacctgagattatgtc 845
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 347 bits (175), Expect = 3e-92 Identities = 355/415 (85%) Strand = Plus / Plus Query: 169 catacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggag 228 |||||||| | ||||| ||||| || | ||||| |||||||| |||||||| ||||| | Sbjct: 15398777 catacttcttagaagcataccgcccagtgaggaaaggagatctcttccttgtcaggggtg 15398836 Query: 229 gaatgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatcgttg 288 ||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 15398837 gaatgagaagtgtggaattcaaagtcatagagactgaccctactgagtattgcatcgttg 15398896 Query: 289 cacccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggagaggc 348 |||| || || || |||||||||||||| |||||| |||||||||| |||||||| |||| Sbjct: 15398897 caccagatacagaaatattctgtgatggggagcctattaagagggaagatgaggaaaggc 15398956 Query: 349 ttgacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagag 408 |||| || ||||| ||||||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 15398957 ttgatgaggttggatatgatgatgttggtggagttagaaagcagatggctcaaatcagag 15399016 Query: 409 aactggttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctc 468 | || ||||| || ||||||||||| || || |||||||| || ||||| |||||||| | Sbjct: 15399017 agcttgttgagcttccactgcgtcatccccaacttttcaaatccattggtgtgaagccac 15399076 Query: 469 caaagggcatattgctgtttggtccacctggctctggcaagacccttattgctagagctg 528 |||||||||||||||||| ||| |||||||| ||||| || ||||| |||||| | |||| Sbjct: 15399077 caaagggcatattgctgtatggaccacctggttctggaaaaaccctcattgctcgtgctg 15399136 Query: 529 ttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatgtc 583 |||| ||||| || || || || |||||| |||| ||||| || || |||||||| Sbjct: 15399137 ttgcaaatgagactggagcctttttctttttgattaatggacctgagattatgtc 15399191 Score = 131 bits (66), Expect = 3e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 21 gtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtctgttcaccaatgcccagac 80 |||||||| ||| || | ||||||||||||||||| || ||||| ||||| |||| || Sbjct: 15398500 gtcaggaagaacctgagggtgcgacttggtgatgttgtttctgtccaccagtgccaggat 15398559 Query: 81 gtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttgaaggcattact 140 ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 15398560 gtgaaatacgggaaacgtgtgcacattcttccgattgatgatacagttgaaggcattacc 15398619 Query: 141 ggaaacttgtttgatgccttcttgaa 166 || ||| |||||||||||||| |||| Sbjct: 15398620 gggaacctgtttgatgccttcctgaa 15398645
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 347 bits (175), Expect = 3e-92 Identities = 355/415 (85%) Strand = Plus / Plus Query: 169 catacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggag 228 |||||||| | ||||| ||||| || | ||||| |||||||| |||||||| ||||| | Sbjct: 116140 catacttcttagaagcataccgcccagtgaggaaaggagatctcttccttgtcaggggtg 116199 Query: 229 gaatgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatcgttg 288 ||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 116200 gaatgagaagtgtggaattcaaagtcatagagactgaccctactgagtattgcatcgttg 116259 Query: 289 cacccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggagaggc 348 |||| || || || |||||||||||||| |||||| |||||||||| |||||||| |||| Sbjct: 116260 caccagatacagaaatattctgtgatggggagcctattaagagggaagatgaggaaaggc 116319 Query: 349 ttgacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagag 408 |||| || ||||| ||||||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 116320 ttgatgaggttggatatgatgatgttggtggagttagaaagcagatggctcaaatcagag 116379 Query: 409 aactggttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctc 468 | || ||||| || ||||||||||| || || |||||||| || ||||| |||||||| | Sbjct: 116380 agcttgttgagcttccactgcgtcatccccaacttttcaaatccattggtgtgaagccac 116439 Query: 469 caaagggcatattgctgtttggtccacctggctctggcaagacccttattgctagagctg 528 |||||||||||||||||| ||| |||||||| ||||| || ||||| |||||| | |||| Sbjct: 116440 caaagggcatattgctgtatggaccacctggttctggaaaaaccctcattgctcgtgctg 116499 Query: 529 ttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatgtc 583 |||| ||||| || || || || |||||| |||| ||||| || || |||||||| Sbjct: 116500 ttgcaaatgagactggagcctttttctttttgattaatggacctgagattatgtc 116554 Score = 131 bits (66), Expect = 3e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 21 gtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtctgttcaccaatgcccagac 80 |||||||| ||| || | ||||||||||||||||| || ||||| ||||| |||| || Sbjct: 115863 gtcaggaagaacctgagggtgcgacttggtgatgttgtttctgtccaccagtgccaggat 115922 Query: 81 gtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttgaaggcattact 140 ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 115923 gtgaaatacgggaaacgtgtgcacattcttccgattgatgatacagttgaaggcattacc 115982 Query: 141 ggaaacttgtttgatgccttcttgaa 166 || ||| |||||||||||||| |||| Sbjct: 115983 gggaacctgtttgatgccttcctgaa 116008
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 347 bits (175), Expect = 3e-92 Identities = 355/415 (85%) Strand = Plus / Plus Query: 169 catacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggag 228 |||||||| | ||||| ||||| || | ||||| |||||||| |||||||| ||||| | Sbjct: 15407018 catacttcttagaagcataccgcccagtgaggaaaggagatctcttccttgtcaggggtg 15407077 Query: 229 gaatgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatcgttg 288 ||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 15407078 gaatgagaagtgtggaattcaaagtcatagagactgaccctactgagtattgcatcgttg 15407137 Query: 289 cacccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggagaggc 348 |||| || || || |||||||||||||| |||||| |||||||||| |||||||| |||| Sbjct: 15407138 caccagatacagaaatattctgtgatggggagcctattaagagggaagatgaggaaaggc 15407197 Query: 349 ttgacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagag 408 |||| || ||||| ||||||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 15407198 ttgatgaggttggatatgatgatgttggtggagttagaaagcagatggctcaaatcagag 15407257 Query: 409 aactggttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctc 468 | || ||||| || ||||||||||| || || |||||||| || ||||| |||||||| | Sbjct: 15407258 agcttgttgagcttccactgcgtcatccccaacttttcaaatccattggtgtgaagccac 15407317 Query: 469 caaagggcatattgctgtttggtccacctggctctggcaagacccttattgctagagctg 528 |||||||||||||||||| ||| |||||||| ||||| || ||||| |||||| | |||| Sbjct: 15407318 caaagggcatattgctgtatggaccacctggttctggaaaaaccctcattgctcgtgctg 15407377 Query: 529 ttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatgtc 583 |||| ||||| || || || || |||||| |||| ||||| || || |||||||| Sbjct: 15407378 ttgcaaatgagactggagcctttttctttttgattaatggacctgagattatgtc 15407432 Score = 131 bits (66), Expect = 3e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 21 gtcaggaaaaacttgcgagtgcgacttggtgatgtggtgtctgttcaccaatgcccagac 80 |||||||| ||| || | ||||||||||||||||| || ||||| ||||| |||| || Sbjct: 15406741 gtcaggaagaacctgagggtgcgacttggtgatgttgtttctgtccaccagtgccaggat 15406800 Query: 81 gtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttgaaggcattact 140 ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 15406801 gtgaaatacgggaaacgtgtgcacattcttccgattgatgatacagttgaaggcattacc 15406860 Query: 141 ggaaacttgtttgatgccttcttgaa 166 || ||| |||||||||||||| |||| Sbjct: 15406861 gggaacctgtttgatgccttcctgaa 15406886
>ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE 48); ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G09840 (CDC48) mRNA, complete cds Length = 2797 Score = 272 bits (137), Expect = 1e-69 Identities = 407/497 (81%) Strand = Plus / Plus Query: 60 tctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgat 119 ||||||||||||||||||||||| || ||||| |||||||| ||||| || ||| ||||| Sbjct: 467 tctgttcaccaatgcccagacgtcaagtacggaaagcgtgttcacatcctgcctgttgat 526 Query: 120 gacacagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttcctt 179 || || |||||||| | ||||||||| | |||||||| | | ||||||| || |||||| Sbjct: 527 gatactgttgaaggagtgactggaaacctatttgatgcttacctgaaaccttatttcctt 586 Query: 180 gaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagt 239 || || |||||||| | |||||||| ||||| ||||| || || ||||||||||| ||| Sbjct: 587 gaggcataccgtccagtgaggaagggtgatctcttcctagtcagaggaggaatgaggagt 646 Query: 240 gtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacact 299 ||||| |||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 647 gtggagttcaaagttatagagacagatcctgctgagtactgcgtggttgctccagacaca 706 Query: 300 gagatattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgtt 359 ||||| |||||||| ||||||||||| ||||| |||||||| || ||||| || ||||| Sbjct: 707 gagattttctgtgagggtgagcctgtgaagagagaggatgaagaaaggctagatgatgta 766 Query: 360 ggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaa 419 || ||||||||||||||||| || ||||| || ||||| ||||| || ||||| |||||| Sbjct: 767 ggttatgatgatgttggtggtgtcaggaaacagatggctcagattagggaacttgttgaa 826 Query: 420 ctcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcata 479 || || || | || || ||||| |||||||| ||||| || ||||| || ||||| || Sbjct: 827 cttcccttgaggcatccacagctattcaagtcgattggtgttaagccaccgaagggaatt 886 Query: 480 ttgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaa 539 | || | ||| |||||||| ||||| ||||| | || ||| | ||||| || |||||| Sbjct: 887 cttctttatggaccacctgggtctggaaagactttgatcgctcgtgctgtggctaatgaa 946 Query: 540 acaggtgcattcttctt 556 || ||||| || ||||| Sbjct: 947 acgggtgcctttttctt 963
>gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, complete cds Length = 2628 Score = 272 bits (137), Expect = 1e-69 Identities = 407/497 (81%) Strand = Plus / Plus Query: 60 tctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgat 119 ||||||||||||||||||||||| || ||||| |||||||| ||||| || ||| ||||| Sbjct: 423 tctgttcaccaatgcccagacgtcaagtacggaaagcgtgttcacatcctgcctgttgat 482 Query: 120 gacacagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttcctt 179 || || |||||||| | ||||||||| | |||||||| | | ||||||| || |||||| Sbjct: 483 gatactgttgaaggagtgactggaaacctatttgatgcttacctgaaaccttatttcctt 542 Query: 180 gaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagt 239 || || |||||||| | |||||||| ||||| ||||| || || ||||||||||| ||| Sbjct: 543 gaggcataccgtccagtgaggaagggtgatctcttcctagtcagaggaggaatgaggagt 602 Query: 240 gtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacact 299 ||||| |||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 603 gtggagttcaaagttatagagacagatcctgctgagtactgcgtggttgctccagacaca 662 Query: 300 gagatattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgtt 359 ||||| |||||||| ||||||||||| ||||| |||||||| || ||||| || ||||| Sbjct: 663 gagattttctgtgagggtgagcctgtgaagagagaggatgaagaaaggctagatgatgta 722 Query: 360 ggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaa 419 || ||||||||||||||||| || ||||| || ||||| ||||| || ||||| |||||| Sbjct: 723 ggttatgatgatgttggtggtgtcaggaaacagatggctcagattagggaacttgttgaa 782 Query: 420 ctcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcata 479 || || || | || || ||||| |||||||| ||||| || ||||| || ||||| || Sbjct: 783 cttcccttgaggcatccacagctattcaagtcgattggtgttaagccaccgaagggaatt 842 Query: 480 ttgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaa 539 | || | ||| |||||||| ||||| ||||| | || ||| | ||||| || |||||| Sbjct: 843 cttctttatggaccacctgggtctggaaagactttgatcgctcgtgctgtggctaatgaa 902 Query: 540 acaggtgcattcttctt 556 || ||||| || ||||| Sbjct: 903 acgggtgcctttttctt 919
>gb|AY065076.1| Arabidopsis thaliana putative transitional endoplasmic reticulum ATPase (F8A24.11) mRNA, complete cds Length = 2730 Score = 272 bits (137), Expect = 1e-69 Identities = 407/497 (81%) Strand = Plus / Plus Query: 60 tctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgat 119 ||||||||||||||||||||||| || ||||| |||||||| ||||| || ||| ||||| Sbjct: 457 tctgttcaccaatgcccagacgtcaagtacggaaagcgtgttcacatcctgcctgttgat 516 Query: 120 gacacagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttcctt 179 || || |||||||| | ||||||||| | |||||||| | | ||||||| || |||||| Sbjct: 517 gatactgttgaaggagtgactggaaacctatttgatgcttacctgaaaccttatttcctt 576 Query: 180 gaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagt 239 || || |||||||| | |||||||| ||||| ||||| || || ||||||||||| ||| Sbjct: 577 gaggcataccgtccagtgaggaagggtgatctcttcctagtcagaggaggaatgaggagt 636 Query: 240 gtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacact 299 ||||| |||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 637 gtggagttcaaagttatagagacagatcctgctgagtactgcgtggttgctccagacaca 696 Query: 300 gagatattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgtt 359 ||||| |||||||| ||||||||||| ||||| |||||||| || ||||| || ||||| Sbjct: 697 gagattttctgtgagggtgagcctgtgaagagagaggatgaagaaaggctagatgatgta 756 Query: 360 ggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaa 419 || ||||||||||||||||| || ||||| || ||||| ||||| || ||||| |||||| Sbjct: 757 ggttatgatgatgttggtggtgtcaggaaacagatggctcagattagggaacttgttgaa 816 Query: 420 ctcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcata 479 || || || | || || ||||| |||||||| ||||| || ||||| || ||||| || Sbjct: 817 cttcccttgaggcatccacagctattcaagtcgattggtgttaagccaccgaagggaatt 876 Query: 480 ttgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaa 539 | || | ||| |||||||| ||||| ||||| | || ||| | ||||| || |||||| Sbjct: 877 cttctttatggaccacctgggtctggaaagactttgatcgctcgtgctgtggctaatgaa 936 Query: 540 acaggtgcattcttctt 556 || ||||| || ||||| Sbjct: 937 acgggtgcctttttctt 953
>gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle protein (CDC48) mRNA, complete cds Length = 2638 Score = 272 bits (137), Expect = 1e-69 Identities = 407/497 (81%) Strand = Plus / Plus Query: 60 tctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgat 119 ||||||||||||||||||||||| || ||||| |||||||| ||||| || ||| ||||| Sbjct: 406 tctgttcaccaatgcccagacgtcaagtacggaaagcgtgttcacatcctgcctgttgat 465 Query: 120 gacacagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttcctt 179 || || |||||||| | ||||||||| | |||||||| | | ||||||| || |||||| Sbjct: 466 gatactgttgaaggagtgactggaaacctatttgatgcttacctgaaaccttatttcctt 525 Query: 180 gaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagt 239 || || |||||||| | |||||||| ||||| ||||| || || ||||||||||| ||| Sbjct: 526 gaggcataccgtccagtgaggaagggtgatctcttcctagtcagaggaggaatgaggagt 585 Query: 240 gtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacact 299 ||||| |||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 586 gtggagttcaaagttatagagacagatcctgctgagtactgcgtggttgctccagacaca 645 Query: 300 gagatattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgtt 359 ||||| |||||||| ||||||||||| ||||| |||||||| || ||||| || ||||| Sbjct: 646 gagattttctgtgagggtgagcctgtgaagagagaggatgaagaaaggctagatgatgta 705 Query: 360 ggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaa 419 || ||||||||||||||||| || ||||| || ||||| ||||| || ||||| |||||| Sbjct: 706 ggttatgatgatgttggtggtgtcaggaaacagatggctcagattagggaacttgttgaa 765 Query: 420 ctcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcata 479 || || || | || || ||||| |||||||| ||||| || ||||| || ||||| || Sbjct: 766 cttcccttgaggcatccacagctattcaagtcgattggtgttaagccaccgaagggaatt 825 Query: 480 ttgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaa 539 | || | ||| |||||||| ||||| ||||| | || ||| | ||||| || |||||| Sbjct: 826 cttctttatggaccacctgggtctggaaagactttgatcgctcgtgctgtggctaatgaa 885 Query: 540 acaggtgcattcttctt 556 || ||||| || ||||| Sbjct: 886 acgggtgcctttttctt 902
>gb|BT012783.1| Lycopersicon esculentum clone 113773R, mRNA sequence Length = 2684 Score = 258 bits (130), Expect = 2e-65 Identities = 439/542 (80%) Strand = Plus / Plus Query: 45 cttggtgatgtggtgtctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcac 104 ||||| ||||| |||||||| |||||||||||||| || || || || |||||||| ||| Sbjct: 347 cttggagatgttgtgtctgtgcaccaatgcccagatgttaagtatgggaagcgtgtccac 406 Query: 105 atacttcctattgatgacacagttgaaggcattactggaaacttgtttgatgccttcttg 164 ||||||||||| ||||| ||| | ||||| | || || | ||||||||||| ||| || Sbjct: 407 atacttcctatagatgatacaatagaaggtctcaccggggatttgtttgatgcgttcctg 466 Query: 165 aaaccatacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgagg 224 ||||| ||||| | ||||| || |||||||| ||||| ||||| ||| ||||| || Sbjct: 467 aaaccgtactttttggaagcatatcgtcctttgaggaaaggagacaattttcttgttaga 526 Query: 225 ggaggaatgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatc 284 || || ||||||||||||||||||||||| || ||||| ||||| | |||||||| | Sbjct: 527 ggggggatgagaagtgtggaattcaaagtcattgagactgacccaggggagtattgtgtt 586 Query: 285 gttgcacccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggag 344 ||||| || |||||||| || || ||||| || ||||||||||| ||||||||||||||| Sbjct: 587 gttgccccagacactgaaatcttttgtgagggggagcctgttaaaagggaggatgaggag 646 Query: 345 aggcttgacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatc 404 || || ||||| ||||||||||||||||||||||| || || || || ||||| || || Sbjct: 647 agactggacgaagttggctatgatgatgttggtggtgtgagaaaacagatggctcaaatt 706 Query: 405 agagaactggttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaag 464 | |||||||| ||||| ||| || | || ||||| |||||||| || ||||| ||||| Sbjct: 707 cgtgaactggtggaactaccattgaggcatcctcaacttttcaaatccattggtgtgaaa 766 Query: 465 cctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgctaga 524 || |||||||| || || || | ||| || ||||| ||||| |||||||| || || ||| Sbjct: 767 ccaccaaaggggattttactttatgggccccctggttctgggaagaccctgatagcaaga 826 Query: 525 gctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatgtcc 584 || || || || |||||||||||||| |||||| || ||||| |||||||| |||||| Sbjct: 827 gcagtggctaacgaaacaggtgcatttttcttttgcattaatggaccagaaatcatgtcc 886 Query: 585 aa 586 || Sbjct: 887 aa 888
>gb|BT014585.1| Lycopersicon esculentum clone 134043F, mRNA sequence Length = 2708 Score = 246 bits (124), Expect = 7e-62 Identities = 433/536 (80%) Strand = Plus / Plus Query: 51 gatgtggtgtctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatactt 110 ||||| || ||||| ||||| || ||||| || || || || |||||||| |||||||| Sbjct: 378 gatgttgtatctgtgcaccagtgtccagatgtcaagtatgggaagcgtgtccacatactc 437 Query: 111 cctattgatgacacagttgaaggcattactggaaacttgtttgatgccttcttgaaacca 170 ||||||||||| ||| | ||||| | || || | ||||||||||| ||| | ||||| Sbjct: 438 cctattgatgatacaatagaaggtctcacaggggatttgtttgatgcattccttaaacct 497 Query: 171 tacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggagga 230 ||||| | || || || ||||| || ||||||||||| ||| ||||| || ||||| Sbjct: 498 tactttttggaggcatatcgtccattgaggaagggagacaattttcttgttagaggaggg 557 Query: 231 atgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgca 290 |||||||||||||||||||| || ||||| || ||||||| |||||||| | ||||| Sbjct: 558 atgagaagtgtggaattcaaggtcatagaaactgaccctggggagtattgtgttgttgct 617 Query: 291 cccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggagaggctt 350 || |||||||| || || ||||| ||||||||||| || ||||||||||||||||| ||| Sbjct: 618 ccagacactgaaatcttttgtgagggtgagcctgtgaaaagggaggatgaggagagactt 677 Query: 351 gacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaa 410 || || ||||||||||||||||| ||||| || || || || ||||||||||| | ||| Sbjct: 678 gatgaagttggctatgatgatgtgggtggtgtcagaaaacagatggcccagattcgtgaa 737 Query: 411 ctggttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctcca 470 ||||| ||||| ||| || | || |||||||||||||| |||||||| ||||| || ||| Sbjct: 738 ctggtggaactaccattgaggcatcctcagcttttcaaatctattggtgtgaaaccacca 797 Query: 471 aagggcatattgctgtttggtccacctggctctggcaagacccttattgctagagctgtt 530 ||||| || || || | ||| || ||||| ||||| ||||| | || || ||||||||| Sbjct: 798 aagggaattttactttatggaccccctggttctggaaagactttgatagccagagctgtt 857 Query: 531 gccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatgtccaa 586 || ||||||||||||||||| |||||| || ||||| || ||||| |||||||| Sbjct: 858 gctaatgaaacaggtgcatttttcttttgcattaatggacctgaaatcatgtccaa 913
>ref|NM_120412.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT5G03340 mRNA, complete cds Length = 2671 Score = 240 bits (121), Expect = 4e-60 Identities = 403/497 (81%) Strand = Plus / Plus Query: 60 tctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgat 119 |||||||||||||||||||| || || || || |||||||| ||||| | ||| ||||| Sbjct: 408 tctgttcaccaatgcccagatgtcaagtatggaaagcgtgttcacatcttgcctgttgat 467 Query: 120 gacacagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttcctt 179 || |||||||||||| ||||||||||| | |||||||| | | ||||||| ||||| || Sbjct: 468 gatacagttgaaggcgttactggaaacctctttgatgcttacctgaaaccttactttctg 527 Query: 180 gaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagt 239 || || |||||||| | |||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 528 gaggcgtaccgtccagtgaggaagggagatcttttcctagtgagaggaggaatgaggagt 587 Query: 240 gtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacact 299 ||||| |||||||| || ||||| || ||||| ||||| || | || || || || || Sbjct: 588 gtggagttcaaagtgatcgagactgatcctgctgagtactgtgtggtggctccagataca 647 Query: 300 gagatattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgtt 359 ||||| |||||||| ||||| || |||||||||||||| || || |||||||| || ||| Sbjct: 648 gagattttctgtgagggtgaaccagttaagagggaggacgaagaaaggcttgatgaggtt 707 Query: 360 ggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaa 419 || ||||| ||||||||||| || ||||| || ||||| ||||| || ||| |||||||| Sbjct: 708 ggttatgacgatgttggtggtgtcaggaaacagatggctcagattagggaattggttgaa 767 Query: 420 ctcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcata 479 || || || | || || || || || || || ||||| |||||||| |||||||| || Sbjct: 768 cttcccttgaggcatccacaactctttaaatcaattggtgtgaagccaccaaagggaatt 827 Query: 480 ttgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaa 539 |||| | || || ||||| || || ||||| ||||||||| | ||||| || |||||| Sbjct: 828 ctgctttacggacctcctggatccgggaagactcttattgctcgtgctgtggctaatgaa 887 Query: 540 acaggtgcattcttctt 556 || || ||||||||||| Sbjct: 888 accggagcattcttctt 904
>gb|BT006485.1| Arabidopsis thaliana At5g03340 gene, complete cds Length = 2433 Score = 240 bits (121), Expect = 4e-60 Identities = 403/497 (81%) Strand = Plus / Plus Query: 60 tctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgat 119 |||||||||||||||||||| || || || || |||||||| ||||| | ||| ||||| Sbjct: 313 tctgttcaccaatgcccagatgtcaagtatggaaagcgtgttcacatcttgcctgttgat 372 Query: 120 gacacagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttcctt 179 || |||||||||||| ||||||||||| | |||||||| | | ||||||| ||||| || Sbjct: 373 gatacagttgaaggcgttactggaaacctctttgatgcttacctgaaaccttactttctg 432 Query: 180 gaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagt 239 || || |||||||| | |||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 433 gaggcgtaccgtccagtgaggaagggagatcttttcctagtgagaggaggaatgaggagt 492 Query: 240 gtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacact 299 ||||| |||||||| || ||||| || ||||| ||||| || | || || || || || Sbjct: 493 gtggagttcaaagtgatcgagactgatcctgctgagtactgtgtggtggctccagataca 552 Query: 300 gagatattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgtt 359 ||||| |||||||| ||||| || |||||||||||||| || || |||||||| || ||| Sbjct: 553 gagattttctgtgagggtgaaccagttaagagggaggacgaagaaaggcttgatgaggtt 612 Query: 360 ggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaa 419 || ||||| ||||||||||| || ||||| || ||||| ||||| || ||| |||||||| Sbjct: 613 ggttatgacgatgttggtggtgtcaggaaacagatggctcagattagggaattggttgaa 672 Query: 420 ctcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcata 479 || || || | || || || || || || || ||||| |||||||| |||||||| || Sbjct: 673 cttcccttgaggcatccacaactctttaaatcaattggtgtgaagccaccaaagggaatt 732 Query: 480 ttgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaa 539 |||| | || || ||||| || || ||||| ||||||||| | ||||| || |||||| Sbjct: 733 ctgctttacggacctcctggatccgggaagactcttattgctcgtgctgtggctaatgaa 792 Query: 540 acaggtgcattcttctt 556 || || ||||||||||| Sbjct: 793 accggagcattcttctt 809
>dbj|AK118571.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL19-80-L03 Length = 2671 Score = 240 bits (121), Expect = 4e-60 Identities = 403/497 (81%) Strand = Plus / Plus Query: 60 tctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgat 119 |||||||||||||||||||| || || || || |||||||| ||||| | ||| ||||| Sbjct: 408 tctgttcaccaatgcccagatgtcaagtatggaaagcgtgttcacatcttgcctgttgat 467 Query: 120 gacacagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttcctt 179 || |||||||||||| ||||||||||| | |||||||| | | ||||||| ||||| || Sbjct: 468 gatacagttgaaggcgttactggaaacctctttgatgcttacctgaaaccttactttctg 527 Query: 180 gaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagt 239 || || |||||||| | |||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 528 gaggcgtaccgtccagtgaggaagggagatcttttcctagtgagaggaggaatgaggagt 587 Query: 240 gtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacact 299 ||||| |||||||| || ||||| || ||||| ||||| || | || || || || || Sbjct: 588 gtggagttcaaagtgatcgagactgatcctgctgagtactgtgtggtggctccagataca 647 Query: 300 gagatattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgtt 359 ||||| |||||||| ||||| || |||||||||||||| || || |||||||| || ||| Sbjct: 648 gagattttctgtgagggtgaaccagttaagagggaggacgaagaaaggcttgatgaggtt 707 Query: 360 ggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaa 419 || ||||| ||||||||||| || ||||| || ||||| ||||| || ||| |||||||| Sbjct: 708 ggttatgacgatgttggtggtgtcaggaaacagatggctcagattagggaattggttgaa 767 Query: 420 ctcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcata 479 || || || | || || || || || || || ||||| |||||||| |||||||| || Sbjct: 768 cttcccttgaggcatccacaactctttaaatcaattggtgtgaagccaccaaagggaatt 827 Query: 480 ttgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaa 539 |||| | || || ||||| || || ||||| ||||||||| | ||||| || |||||| Sbjct: 828 ctgctttacggacctcctggatccgggaagactcttattgctcgtgctgtggctaatgaa 887 Query: 540 acaggtgcattcttctt 556 || || ||||||||||| Sbjct: 888 accggagcattcttctt 904
>dbj|AK117125.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL16-66-D01 Length = 2664 Score = 240 bits (121), Expect = 4e-60 Identities = 403/497 (81%) Strand = Plus / Plus Query: 60 tctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgat 119 |||||||||||||||||||| || || || || |||||||| ||||| | ||| ||||| Sbjct: 401 tctgttcaccaatgcccagatgtcaagtatggaaagcgtgttcacatcttgcctgttgat 460 Query: 120 gacacagttgaaggcattactggaaacttgtttgatgccttcttgaaaccatacttcctt 179 || |||||||||||| ||||||||||| | |||||||| | | ||||||| ||||| || Sbjct: 461 gatacagttgaaggcgttactggaaacctctttgatgcttacctgaaaccttactttctg 520 Query: 180 gaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatgagaagt 239 || || |||||||| | |||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 521 gaggcgtaccgtccagtgaggaagggagatcttttcctagtgagaggaggaatgaggagt 580 Query: 240 gtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgcacccgacact 299 ||||| |||||||| || ||||| || ||||| ||||| || | || || || || || Sbjct: 581 gtggagttcaaagtgatcgagactgatcctgctgagtactgtgtggtggctccagataca 640 Query: 300 gagatattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgacgatgtt 359 ||||| |||||||| ||||| || |||||||||||||| || || |||||||| || ||| Sbjct: 641 gagattttctgtgagggtgaaccagttaagagggaggacgaagaaaggcttgatgaggtt 700 Query: 360 ggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaa 419 || ||||| ||||||||||| || ||||| || ||||| ||||| || ||| |||||||| Sbjct: 701 ggttatgacgatgttggtggtgtcaggaaacagatggctcagattagggaattggttgaa 760 Query: 420 ctcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcata 479 || || || | || || || || || || || ||||| |||||||| |||||||| || Sbjct: 761 cttcccttgaggcatccacaactctttaaatcaattggtgtgaagccaccaaagggaatt 820 Query: 480 ttgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaa 539 |||| | || || ||||| || || ||||| ||||||||| | ||||| || |||||| Sbjct: 821 ctgctttacggacctcctggatccgggaagactcttattgctcgtgctgtggctaatgaa 880 Query: 540 acaggtgcattcttctt 556 || || ||||||||||| Sbjct: 881 accggagcattcttctt 897
>gb|AY105040.1| Zea mays PCO097024 mRNA sequence Length = 2126 Score = 212 bits (107), Expect = 1e-51 Identities = 215/251 (85%) Strand = Plus / Plus Query: 333 gaggatgaggagaggcttgacgatgttggctatgatgatgttggtggagttaggaagcaa 392 |||||||||||| | ||||| || ||||| ||||||||||||||||||||||| |||||| Sbjct: 91 gaggatgaggagcgtcttgatgaagttggttatgatgatgttggtggagttagaaagcaa 150 Query: 393 atggcccagatcagagaactggttgaactcccactgcgtcaccctcagcttttcaagtct 452 |||||||| |||||||| || ||||| || ||||| || || ||||| |||||||| ||| Sbjct: 151 atggcccaaatcagagagcttgttgagcttccactacgccatcctcaacttttcaaatct 210 Query: 453 attggcgtgaagcctccaaagggcatattgctgtttggtccacctggctctggcaagacc 512 ||||| |||||||| ||||||||||||||||||| || |||||||| || || ||||| Sbjct: 211 attggtgtgaagccaccaaagggcatattgctgtacgggccacctggttcgggaaagact 270 Query: 513 cttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatggccca 572 ||||||||| | |||||||| ||||| || || || || ||||| ||||||||||| ||| Sbjct: 271 cttattgctcgtgctgttgcaaatgagactggagcctttttcttcctgatcaatggtcca 330 Query: 573 gaaattatgtc 583 || |||||||| Sbjct: 331 gagattatgtc 341
>emb|Y09396.1|CACAFP C.annuum mRNA for CDC48p-like protein Length = 2682 Score = 206 bits (104), Expect = 6e-50 Identities = 428/536 (79%) Strand = Plus / Plus Query: 51 gatgtggtgtctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatactt 110 ||||| || ||||| ||||| || ||||| || || || || |||||||||||||||||| Sbjct: 343 gatgttgtatctgtccaccagtgtccagatgtcaagtatgggaagcgtgtgcacatactt 402 Query: 111 cctattgatgacacagttgaaggcattactggaaacttgtttgatgccttcttgaaacca 170 ||||| ||||| ||| | |||||| | || || | |||||||||| ||| ||||||| Sbjct: 403 cctatagatgatacaatagaaggcctcacaggggatctgtttgatgcattcctgaaacct 462 Query: 171 tacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggagga 230 ||||| | || || || ||||| || ||||| || || ||| ||||| || ||||| Sbjct: 463 tactttttggaggcatatcgtccattgaggaaaggggacaattttcttgttagaggaggg 522 Query: 231 atgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgca 290 |||||||||||||||||||| || ||||| || ||||||| |||||||| | ||||| Sbjct: 523 atgagaagtgtggaattcaaggtcatagaaaccgaccctggggagtattgtgttgttgct 582 Query: 291 cccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggagaggctt 350 || |||||||| || || ||||| ||||||||||| || || |||||||||||||| ||| Sbjct: 583 ccagacactgaaatcttttgtgagggtgagcctgtgaaaagagaggatgaggagagactt 642 Query: 351 gacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaa 410 || || || |||||||||||||| ||||| || || ||||| ||||| ||||| | ||| Sbjct: 643 gatgaggtaggctatgatgatgtgggtggtgtgagaaagcagatggctcagattcgtgaa 702 Query: 411 ctggttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctcca 470 ||||| ||| | || || | || ||||| |||||||| |||||||| ||||| || ||| Sbjct: 703 ctggtggaattaccgttgaggcatcctcaacttttcaaatctattggtgtgaaaccacca 762 Query: 471 aagggcatattgctgtttggtccacctggctctggcaagacccttattgctagagctgtt 530 ||||| || || || | ||| || ||||| ||||| ||||| | || || ||||||||| Sbjct: 763 aaggggattttactttatggcccccctggttctggaaagactttgatagccagagctgtt 822 Query: 531 gccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatgtccaa 586 || ||||||||||||||||| |||||| || ||||| || ||||| |||||||| Sbjct: 823 gctaatgaaacaggtgcatttttcttttgcattaatggacctgaaatcatgtccaa 878
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 196 bits (99), Expect = 6e-47 Identities = 312/383 (81%) Strand = Plus / Minus Query: 174 ttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgaggggaggaatg 233 |||||||| || |||||||| | |||||||| ||||| ||||| || || ||||||||| Sbjct: 46238 ttccttgaggcataccgtccagtgaggaagggtgatctcttcctagtcagaggaggaatg 46179 Query: 234 agaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatcgttgcaccc 293 || |||||||| |||||||||||||||||||| ||||| ||||| ||| | ||||| || Sbjct: 46178 aggagtgtggagttcaaagttatagagacagatcctgctgagtactgcgtggttgctcca 46119 Query: 294 gacactgagatattctgtgatggtgagcctgttaagagggaggatgaggagaggcttgac 353 ||||| ||||| |||||||| ||||||||||| ||||| |||||||| || ||||| || Sbjct: 46118 gacacagagattttctgtgagggtgagcctgtgaagagagaggatgaagaaaggctagat 46059 Query: 354 gatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactg 413 ||||| || ||||||||||||||||| || ||||| || ||||| ||||| || ||||| Sbjct: 46058 gatgtaggttatgatgatgttggtggtgtcaggaaacagatggctcagattagggaactt 45999 Query: 414 gttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaag 473 |||||||| || || | || || ||||| |||||||| ||||| || ||||| || ||| Sbjct: 45998 gttgaacttcccttgaggcatccacagctattcaagtcgattggtgttaagccaccgaag 45939 Query: 474 ggcatattgctgtttggtccacctggctctggcaagacccttattgctagagctgttgcc 533 || || | || | ||| |||||||| ||||| ||||| | || ||| | ||||| || Sbjct: 45938 ggaattcttctttatggaccacctgggtctggaaagactttgatcgctcgtgctgtggct 45879 Query: 534 aatgaaacaggtgcattcttctt 556 |||||||| ||||| || ||||| Sbjct: 45878 aatgaaacgggtgcctttttctt 45856 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 60 tctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgat 119 ||||||||||||||||||||||| || ||||| |||||||| ||||| || ||| ||||| Sbjct: 46478 tctgttcaccaatgcccagacgtcaagtacggaaagcgtgttcacatcctgcctgttgat 46419 Query: 120 gacacagttgaaggcattactggaaacttgtttgatgc 157 || || |||||||| | ||||||||| | |||||||| Sbjct: 46418 gatactgttgaaggagtgactggaaacctatttgatgc 46381
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 165 bits (83), Expect = 2e-37 Identities = 290/359 (80%) Strand = Plus / Minus Query: 198 aggaagggagatcttttccttgtgaggggaggaatgagaagtgtggaattcaaagttata 257 |||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| || Sbjct: 25990 aggaagggagatcttttcctagtgagaggaggaatgaggagtgtggagttcaaagtgatc 25931 Query: 258 gagacagaccctgcagagtattgcatcgttgcacccgacactgagatattctgtgatggt 317 ||||| || ||||| ||||| || | || || || || || ||||| |||||||| ||| Sbjct: 25930 gagactgatcctgctgagtactgtgtggtggctccagatacagagattttctgtgagggt 25871 Query: 318 gagcctgttaagagggaggatgaggagaggcttgacgatgttggctatgatgatgttggt 377 || || |||||||||||||| || || |||||||| || ||||| ||||| ||||||||| Sbjct: 25870 gaaccagttaagagggaggacgaagaaaggcttgatgaggttggttatgacgatgttggt 25811 Query: 378 ggagttaggaagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccct 437 || || ||||| || ||||| ||||| || ||| |||||||||| || || | || || Sbjct: 25810 ggtgtcaggaaacagatggctcagattagggaattggttgaacttcccttgaggcatcca 25751 Query: 438 cagcttttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacct 497 || || || || || ||||| |||||||| |||||||| || |||| | || || ||| Sbjct: 25750 caactctttaaatcaattggtgtgaagccaccaaagggaattctgctttacggacctcct 25691 Query: 498 ggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttctt 556 || || || ||||| ||||||||| | ||||| || |||||||| || ||||||||||| Sbjct: 25690 ggatccgggaagactcttattgctcgtgctgtggctaatgaaaccggagcattcttctt 25632 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 60 tctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgat 119 |||||||||||||||||||| || || || || |||||||| ||||| | ||| ||||| Sbjct: 26227 tctgttcaccaatgcccagatgtcaagtatggaaagcgtgttcacatcttgcctgttgat 26168 Query: 120 gacacagttgaaggcattactggaaacttgtttgatgc 157 || |||||||||||| ||||||||||| | |||||||| Sbjct: 26167 gatacagttgaaggcgttactggaaacctctttgatgc 26130
>ref|NM_115183.2| Arabidopsis thaliana ATP binding / hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G53230 mRNA, complete cds Length = 2672 Score = 149 bits (75), Expect = 1e-32 Identities = 288/359 (80%) Strand = Plus / Plus Query: 198 aggaagggagatcttttccttgtgaggggaggaatgagaagtgtggaattcaaagttata 257 |||||||| ||||||||||| || || ||||| ||||||||| | || || || ||||| Sbjct: 495 aggaagggcgatcttttcctagttagaggagggatgagaagtattgagtttaaggttatt 554 Query: 258 gagacagaccctgcagagtattgcatcgttgcacccgacactgagatattctgtgatggt 317 || || || ||||| ||||| || | ||||| || || || || || |||||||| ||| Sbjct: 555 gaaactgatcctgctgagtactgtgtggttgctccagatacagaaattttctgtgaaggt 614 Query: 318 gagcctgttaagagggaggatgaggagaggcttgacgatgttggctatgatgatgttggt 377 || || | ||||| ||||||||||||||| | || || ||||| ||||||||||||||| Sbjct: 615 gaaccgataaagagagaggatgaggagaggttggatgaagttgggtatgatgatgttggt 674 Query: 378 ggagttaggaagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccct 437 || || ||||| |||||||| ||||| | ||||| ||||| |||||| || | || || Sbjct: 675 ggtgtcaggaaacaaatggctcagattcgtgaacttgttgagctcccattgaggcatcca 734 Query: 438 cagcttttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacct 497 ||||| |||||||||||||| ||||| ||||| || || || ||||| | ||| || ||| Sbjct: 735 cagctcttcaagtctattggtgtgaaacctcccaaaggaatcttgctctatggccctcct 794 Query: 498 ggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttctt 556 || ||||| ||||| |||||||| | |||||||| ||||| || |||||||| ||||| Sbjct: 795 ggttctgggaagacacttattgcccgtgctgttgctaatgagactggtgcatttttctt 853
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2 Length = 92611 Score = 149 bits (75), Expect = 1e-32 Identities = 288/359 (80%) Strand = Plus / Plus Query: 198 aggaagggagatcttttccttgtgaggggaggaatgagaagtgtggaattcaaagttata 257 |||||||| ||||||||||| || || ||||| ||||||||| | || || || ||||| Sbjct: 48382 aggaagggcgatcttttcctagttagaggagggatgagaagtattgagtttaaggttatt 48441 Query: 258 gagacagaccctgcagagtattgcatcgttgcacccgacactgagatattctgtgatggt 317 || || || ||||| ||||| || | ||||| || || || || || |||||||| ||| Sbjct: 48442 gaaactgatcctgctgagtactgtgtggttgctccagatacagaaattttctgtgaaggt 48501 Query: 318 gagcctgttaagagggaggatgaggagaggcttgacgatgttggctatgatgatgttggt 377 || || | ||||| ||||||||||||||| | || || ||||| ||||||||||||||| Sbjct: 48502 gaaccgataaagagagaggatgaggagaggttggatgaagttgggtatgatgatgttggt 48561 Query: 378 ggagttaggaagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccct 437 || || ||||| |||||||| ||||| | ||||| ||||| |||||| || | || || Sbjct: 48562 ggtgtcaggaaacaaatggctcagattcgtgaacttgttgagctcccattgaggcatcca 48621 Query: 438 cagcttttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacct 497 ||||| |||||||||||||| ||||| ||||| || || || ||||| | ||| || ||| Sbjct: 48622 cagctcttcaagtctattggtgtgaaacctcccaaaggaatcttgctctatggccctcct 48681 Query: 498 ggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttctt 556 || ||||| ||||| |||||||| | |||||||| ||||| || |||||||| ||||| Sbjct: 48682 ggttctgggaagacacttattgcccgtgctgttgctaatgagactggtgcatttttctt 48740
>gb|DQ359725.1| Glycine max plamsma membrane-associated AAA-ATPase mRNA, complete cds Length = 2628 Score = 141 bits (71), Expect = 3e-30 Identities = 287/359 (79%) Strand = Plus / Plus Query: 45 cttggtgatgtggtgtctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcac 104 ||||| ||||| |||||||| ||||| ||||| || || ||||| || || ||||||||| Sbjct: 349 cttggagatgttgtgtctgtgcaccagtgcccggatgttaaatatgggaaacgtgtgcac 408 Query: 105 atacttcctattgatgacacagttgaaggcattactggaaacttgtttgatgccttcttg 164 || || ||||||||||| || ||||||| | ||||| || |||||||||| |||||| Sbjct: 409 attctgcctattgatgataccattgaaggtgtcactggcaatctgtttgatgctttcttg 468 Query: 165 aaaccatacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgagg 224 ||||| || ||| | ||||||||||||||| | || || |||||||| || ||||| || Sbjct: 469 aaaccctatttcttggaagcttaccgtcctgtcagaaaaggagatctatttcttgtccgg 528 Query: 225 ggaggaatgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatc 284 ||||| ||||||||||| || ||||| || | || || || |||| ||| ||||| | Sbjct: 529 ggagggatgagaagtgtagagttcaaggtggttgaaaccgatcctggagaatattgtgtt 588 Query: 285 gttgcacccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggag 344 ||||| || |||||||| || |||||||| || |||||| | || || || ||||| ||| Sbjct: 589 gttgctccagacactgaaattttctgtgagggggagcctttgaaaagagaagatgaagag 648 Query: 345 aggcttgacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagat 403 || || || || || || ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 649 agactggatgaagtcgggtatgatgatgtgggtggtgtcaggaaacaaatggctcagat 707
>gb|U20213.1|GMU20213 Glycine max valosin-containing protein mRNA, complete cds Length = 2654 Score = 141 bits (71), Expect = 3e-30 Identities = 287/359 (79%) Strand = Plus / Plus Query: 45 cttggtgatgtggtgtctgttcaccaatgcccagacgtgaaatacggcaagcgtgtgcac 104 ||||| ||||| |||||||| ||||| ||||| || || ||||| || || ||||||||| Sbjct: 369 cttggagatgttgtgtctgtgcaccagtgcccggatgttaaatatgggaaacgtgtgcac 428 Query: 105 atacttcctattgatgacacagttgaaggcattactggaaacttgtttgatgccttcttg 164 || || ||||||||||| || ||||||| | ||||| || |||||||||| |||||| Sbjct: 429 attctgcctattgatgataccattgaaggtgtcactggcaatctgtttgatgctttcttg 488 Query: 165 aaaccatacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtgagg 224 ||||| || ||| | ||||||||||||||| | || || |||||||| || ||||| || Sbjct: 489 aaaccctatttcttggaagcttaccgtcctgtcagaaaaggagatctatttcttgtccgg 548 Query: 225 ggaggaatgagaagtgtggaattcaaagttatagagacagaccctgcagagtattgcatc 284 ||||| ||||||||||| || ||||| || | || || || |||| ||| ||||| | Sbjct: 549 ggagggatgagaagtgtagagttcaaggtggttgaaaccgatcctggagaatattgtgtt 608 Query: 285 gttgcacccgacactgagatattctgtgatggtgagcctgttaagagggaggatgaggag 344 ||||| || |||||||| || |||||||| || |||||| | || || || ||||| ||| Sbjct: 609 gttgctccagacactgaaattttctgtgagggggagcctttgaaaagagaagatgaagag 668 Query: 345 aggcttgacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagat 403 || || || || || || ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 669 agactggatgaagtcgggtatgatgatgtgggtggtgtcaggaaacaaatggctcagat 727
>gb|AY456394.1| 'Chlorella' ellipsoidea cell division cycle protein 48 mRNA, partial cds Length = 2033 Score = 135 bits (68), Expect = 2e-28 Identities = 194/236 (82%) Strand = Plus / Plus Query: 351 gacgatgttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaa 410 |||||||| |||||||| ||||| ||||||||| | ||||| |||||||||||||| || Sbjct: 15 gacgatgtgggctatgacgatgtgggtggagttcgcaagcagatggcccagatcagggag 74 Query: 411 ctggttgaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctcca 470 |||||||| || || ||||| ||||| ||||| |||||| | || ||||| |||||||| Sbjct: 75 ctggttgagctgcccctgcgccacccacagctgttcaagaccatcggcgtcaagcctccc 134 Query: 471 aagggcatattgctgtttggtccacctggctctggcaagacccttattgctagagctgtt 530 |||||||| | || | ||| ||||| || || || ||||| || ||||| || ||||| Sbjct: 135 aagggcatcctcctctatggcccaccaggatcagggaagactctcattgccagggctgtg 194 Query: 531 gccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatgtccaa 586 || |||||||| ||||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 195 gcaaatgaaacgggtgccttcttcttcctcatcaatgggccagagatcatgtccaa 250
>emb|CT032896.1| Platynereis dumerilii EST IB0AAA29DE01FM1 Length = 853 Score = 103 bits (52), Expect = 6e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 102 cacatacttcctattgatgacacagttgaaggcattactggaaacttgtttgatgccttc 161 ||||| ||||| |||||||||||| |||| || || || |||||||||||||| | | | Sbjct: 835 cacattcttcccattgatgacacaattgagggaatcacaggaaacttgtttgaagtgtac 776 Query: 162 ttgaaaccatacttccttgaagcttaccgtcctttaaggaagggagatcttttccttgtg 221 |||| ||||| |||||||| |||||| | || ||||||| ||||| ||||||||||| Sbjct: 775 ctgaagccatatttccttgaggcttacagaccagtaaggaaaggagacattttccttgtg 716 Query: 222 aggggaggaatgagaagtgtggaattcaaagttatagagacaga 265 ||||||||||||||| | || || |||||||| || |||||||| Sbjct: 715 aggggaggaatgagaggagtagagttcaaagtcattgagacaga 672 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 546 gcattcttctttctgatcaatggcccagaaattatg 581 ||||||||||| |||||||||| || ||||||||| Sbjct: 388 gcattcttcttcttgatcaatggacctgaaattatg 353
>ref|XM_462191.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G15994g) partial mRNA Length = 2496 Score = 91.7 bits (46), Expect = 2e-15 Identities = 184/230 (80%) Strand = Plus / Plus Query: 357 gttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggtt 416 ||||| || |||||| | |||||| ||||||||||||||| || || |||||| |||| Sbjct: 628 gttggttacgatgatatcggtggatgtaggaagcaaatggctcaaattagagaattggtc 687 Query: 417 gaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggc 476 || | ||| |||| ||||| || | |||||||||||||| | || ||||||||||| Sbjct: 688 gagttgccattgcgccacccacaattattcaagtctattggtatcaaacctccaaagggt 747 Query: 477 atattgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaat 536 || ||| ||| |||||| || || |||| ||||| | || || || |||||||| ||| Sbjct: 748 atcttgatgtatggtcctccaggtactggtaagactgtcatggcgagggctgttgcgaat 807 Query: 537 gaaacaggtgcattcttctttctgatcaatggcccagaaattatgtccaa 586 || ||||||||||| ||||| |||| ||||| ||||||||||||||||| Sbjct: 808 gagacaggtgcatttttcttcttgattaatggtccagaaattatgtccaa 857
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 91.7 bits (46), Expect = 2e-15 Identities = 184/230 (80%) Strand = Plus / Minus Query: 357 gttggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggtt 416 ||||| || |||||| | |||||| ||||||||||||||| || || |||||| |||| Sbjct: 1217621 gttggttacgatgatatcggtggatgtaggaagcaaatggctcaaattagagaattggtc 1217562 Query: 417 gaactcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggc 476 || | ||| |||| ||||| || | |||||||||||||| | || ||||||||||| Sbjct: 1217561 gagttgccattgcgccacccacaattattcaagtctattggtatcaaacctccaaagggt 1217502 Query: 477 atattgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaat 536 || ||| ||| |||||| || || |||| ||||| | || || || |||||||| ||| Sbjct: 1217501 atcttgatgtatggtcctccaggtactggtaagactgtcatggcgagggctgttgcgaat 1217442 Query: 537 gaaacaggtgcattcttctttctgatcaatggcccagaaattatgtccaa 586 || ||||||||||| ||||| |||| ||||| ||||||||||||||||| Sbjct: 1217441 gagacaggtgcatttttcttcttgattaatggtccagaaattatgtccaa 1217392
>ref|XM_631818.1| Dictyostelium discoideum cell division cycle protein 48 (DDB0191154), partial mRNA Length = 2382 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 516 attgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaa 575 ||||| |||||||| ||||||||||||||||| ||||||||| | |||||||| ||||| Sbjct: 754 attgccagagctgtcgccaatgaaacaggtgctttcttctttttaatcaatggtccagag 813 Query: 576 attatgtccaa 586 ||||||||||| Sbjct: 814 attatgtccaa 824
>gb|U83085.2|DDU83085 Dictyostelium discoideum cell division cycle protein 48 (cdcD) mRNA, complete cds Length = 2517 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 516 attgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaa 575 ||||| |||||||| ||||||||||||||||| ||||||||| | |||||||| ||||| Sbjct: 779 attgccagagctgtcgccaatgaaacaggtgctttcttctttttaatcaatggtccagag 838 Query: 576 attatgtccaa 586 ||||||||||| Sbjct: 839 attatgtccaa 849
>gb|BC074716.1| Xenopus tropicalis valosin-containing protein, mRNA (cDNA clone MGC:69484 IMAGE:5336248), complete cds Length = 3258 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 451 ctattggcgtgaagcctccaaagggcatattgctgtttggtccacctggctctggcaaga 510 ||||||| ||||||||||| | |||||| |||||| || || || ||| |||| || | Sbjct: 808 ctattggggtgaagcctcccaggggcattctgctgtacggacccccaggcactggaaaaa 867 Query: 511 cccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatgg 568 |||| |||||||||||||| ||||||||||| || || |||||||| ||||||||||| Sbjct: 868 ccctcattgctagagctgtggccaatgaaaccggagctttcttcttcctgatcaatgg 925
>ref|NM_001005677.1| Xenopus tropicalis valosin-containing protein (vcp), mRNA Length = 3258 Score = 83.8 bits (42), Expect = 6e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 451 ctattggcgtgaagcctccaaagggcatattgctgtttggtccacctggctctggcaaga 510 ||||||| ||||||||||| | |||||| |||||| || || || ||| |||| || | Sbjct: 808 ctattggggtgaagcctcccaggggcattctgctgtacggacccccaggcactggaaaaa 867 Query: 511 cccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatgg 568 |||| |||||||||||||| ||||||||||| || || |||||||| ||||||||||| Sbjct: 868 ccctcattgctagagctgtggccaatgaaaccggagctttcttcttcctgatcaatgg 925
>ref|XM_708910.1| Candida albicans SC5314 hypothetical protein (CaO19.9876), mRNA Length = 2481 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 462 aagcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgct 521 ||||| |||||||| || ||| ||| |||||||||||| | || || ||| |||| || Sbjct: 739 aagccaccaaagggtattttgatgtatggtccacctggtaccggtaaaaccattatggca 798 Query: 522 agagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 ||||| || ||||||||||||||||| ||||| || |||| ||||| |||||||||||| Sbjct: 799 agagcagtggccaatgaaacaggtgccttctttttcttgataaatggtccagaaattatg 858 Query: 582 tc 583 || Sbjct: 859 tc 860
>ref|XM_708909.1| Candida albicans SC5314 hypothetical protein (CaO19.9875), mRNA Length = 303 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 462 aagcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgct 521 ||||| |||||||| || ||| ||| |||||||||||| | || || ||| |||| || Sbjct: 203 aagccaccaaagggtattttgatgtatggtccacctggtaccggtaaaaccattatggca 144 Query: 522 agagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 ||||| || ||||||||||||||||| ||||| || |||| ||||| |||||||||||| Sbjct: 143 agagcagtggccaatgaaacaggtgccttctttttcttgataaatggtccagaaattatg 84 Query: 582 tc 583 || Sbjct: 83 tc 82
>ref|XM_708852.1| Candida albicans SC5314 hypothetical protein (CaO19.2340), mRNA Length = 2481 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 462 aagcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgct 521 ||||| |||||||| || ||| ||| |||||||||||| | || || ||| |||| || Sbjct: 739 aagccaccaaagggtattttgatgtatggtccacctggtaccggtaaaaccattatggca 798 Query: 522 agagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 ||||| || ||||||||||||||||| ||||| || |||| ||||| |||||||||||| Sbjct: 799 agagcagtggccaatgaaacaggtgccttctttttcttgataaatggtccagaaattatg 858 Query: 582 tc 583 || Sbjct: 859 tc 860
>ref|XM_708851.1| Candida albicans SC5314 hypothetical protein (CaO19.2339), mRNA Length = 303 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 462 aagcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgct 521 ||||| |||||||| || ||| ||| |||||||||||| | || || ||| |||| || Sbjct: 203 aagccaccaaagggtattttgatgtatggtccacctggtaccggtaaaaccattatggca 144 Query: 522 agagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 ||||| || ||||||||||||||||| ||||| || |||| ||||| |||||||||||| Sbjct: 143 agagcagtggccaatgaaacaggtgccttctttttcttgataaatggtccagaaattatg 84 Query: 582 tc 583 || Sbjct: 83 tc 82
>ref|XM_448116.1| Candida glabrata CBS138, CAGL0J09350g partial mRNA Length = 2493 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 488 tggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgc 547 |||||||||||| |||| || ||| | || ||||||||||||||||||||||| ||||| Sbjct: 762 tggtccacctggtactggtaaaaccttgatggctagagctgttgccaatgaaactggtgc 821 Query: 548 attcttctttctgatcaatgg 568 |||||||| |||||||||| Sbjct: 822 tttcttcttcttgatcaatgg 842
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 488 tggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgc 547 |||||||||||| |||| || ||| | || ||||||||||||||||||||||| ||||| Sbjct: 921625 tggtccacctggtactggtaaaaccttgatggctagagctgttgccaatgaaactggtgc 921566 Query: 548 attcttctttctgatcaatgg 568 |||||||| |||||||||| Sbjct: 921565 tttcttcttcttgatcaatgg 921545
>gb|BC049114.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:61308 IMAGE:6810751), complete cds Length = 2876 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1028 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1087 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1088 ggtcctgaaat 1098
>ref|NM_009503.2| Mus musculus valosin containing protein (Vcp), mRNA Length = 3245 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1009 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1068 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1069 ggtcctgaaat 1079
>ref|XM_985606.1| PREDICTED: Mus musculus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 2 (LOC675857), mRNA Length = 2435 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1024 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1083 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1084 ggtcctgaaat 1094
>ref|XM_985571.1| PREDICTED: Mus musculus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC675857), mRNA Length = 3257 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1024 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1083 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1084 ggtcctgaaat 1094
>emb|Z14044.1|MMVALPRO M.musculus mRNA for valosin-containing protein Length = 3143 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 912 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 971 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 972 ggtcctgaaat 982
>ref|XM_961086.1| Plasmodium falciparum 3D7 cell division cycle protein 48 (PFF0940c) partial mRNA Length = 2421 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 519 gctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaatt 578 |||||||||||||| ||||||||||||||||| |||||| | || ||||| |||||| || Sbjct: 772 gctagagctgttgctaatgaaacaggtgcatttttctttttaataaatggaccagaagtt 831 Query: 579 atg 581 ||| Sbjct: 832 atg 834
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 519 gctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaatt 578 |||||||||||||| ||||||||||||||||| |||||| | || ||||| |||||| || Sbjct: 119842 gctagagctgttgctaatgaaacaggtgcatttttctttttaataaatggaccagaagtt 119783 Query: 579 atg 581 ||| Sbjct: 119782 atg 119780
>dbj|AB181225.1| Eisenia fetida evcp-1 mRNA for valosin containing protein-1, complete cds Length = 2932 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 502 ctggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctga 561 ||||||||||||| ||||| | || ||||||||||| || ||||| ||||||||||||| Sbjct: 855 ctggcaagaccctgattgcccgtgccgttgccaatgagaccggtgcgttcttctttctga 914 Query: 562 tcaatgg 568 ||||||| Sbjct: 915 tcaatgg 921 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 99 gtgcacatacttcctattgatgacacagttgaaggcattactggaaacttgtttgatgcc 158 |||||||| || || |||||||||||||||||||| ||||||| ||| | ||||| | | Sbjct: 449 gtgcacatcctaccaattgatgacacagttgaaggtcttactggtaacctttttgaggtc 508 Query: 159 ttcttgaaaccatacttccttgaagcttaccgtcct 194 | | |||| ||||| ||||| || |||||||||||| Sbjct: 509 tacctgaagccatatttcctggaggcttaccgtcct 544
>dbj|AK149931.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530106G21 product:valosin containing protein, full insert sequence Length = 2803 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 973 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1032 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1033 ggtcctgaaat 1043
>dbj|AK146109.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530030L06 product:valosin containing protein, full insert sequence Length = 2855 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 977 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1036 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1037 ggtcctgaaat 1047
>dbj|AK153012.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830114G12 product:valosin containing protein, full insert sequence Length = 2841 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1010 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1069 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1070 ggtcctgaaat 1080
>dbj|AK159177.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420007G04 product:valosin containing protein, full insert sequence Length = 2890 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1009 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1068 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1069 ggtcctgaaat 1079
>dbj|AK151418.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830029K16 product:valosin containing protein, full insert sequence Length = 3210 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 974 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1033 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1034 ggtcctgaaat 1044
>dbj|AK167794.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730026E20 product:valosin containing protein, full insert sequence Length = 2858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1028 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1087 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1088 ggtcctgaaat 1098
>dbj|AK160889.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732413B21 product:valosin containing protein, full insert sequence Length = 2726 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 895 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 954 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 955 ggtcctgaaat 965
>dbj|AK153249.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129H23 product:valosin containing protein, full insert sequence Length = 3286 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1051 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1110 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1111 ggtcctgaaat 1121
>dbj|AK159475.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420020M12 product:valosin containing protein, full insert sequence Length = 2859 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1008 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1067 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1068 ggtcctgaaat 1078
>dbj|AK159509.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420022F22 product:valosin containing protein, full insert sequence Length = 2882 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1052 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1111 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1112 ggtcctgaaat 1122
>dbj|AK169140.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920083B16 product:valosin containing protein, full insert sequence Length = 2812 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 982 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1041 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1042 ggtcctgaaat 1052
>dbj|AK151109.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025E07 product:valosin containing protein, full insert sequence Length = 3210 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 974 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1033 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1034 ggtcctgaaat 1044
>dbj|AK083821.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130015G23 product:valosin containing protein, full insert sequence Length = 2416 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 586 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 645 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 646 ggtcctgaaat 656
>dbj|AK028264.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001E05 product:valosin containing protein, full insert sequence Length = 3245 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1009 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1068 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1069 ggtcctgaaat 1079
>ref|NG_002295.1| Mus musculus valosin containing protein pseudogene (Vcp-ps) on chromosome X Length = 3607 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1271 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1330 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1331 ggtcctgaaat 1341
>dbj|AK030751.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730519N02 product:valosin containing protein, full insert sequence Length = 3091 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 911 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 970 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 971 ggtcctgaaat 981
>dbj|AK218473.1| Mus musculus cDNA, clone:Y2G0145E24, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 387 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 8 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 67 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 68 ggtcctgaaat 78
>dbj|AK218438.1| Mus musculus cDNA, clone:Y2G0145D10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 397 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 289 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 348 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 349 ggtcctgaaat 359
>dbj|AK218772.1| Mus musculus cDNA, clone:Y2G0146E13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 414 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 289 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 348 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 349 ggtcctgaaat 359
>dbj|AK218658.1| Mus musculus cDNA, clone:Y2G0145O04, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 392 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 13 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 72 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 73 ggtcctgaaat 83
>dbj|AK217520.1| Mus musculus cDNA, clone:Y2G0142B02, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 381 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 285 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 344 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 345 ggtcctgaaat 355
>dbj|AK214818.1| Mus musculus cDNA, clone:Y2G0133B20, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 417 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 289 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 348 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 349 ggtcctgaaat 359
>dbj|AK214199.1| Mus musculus cDNA, clone:Y2G0131A06, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 398 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 289 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 348 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 349 ggtcctgaaat 359
>dbj|AK211479.1| Mus musculus cDNA, clone:Y2G0121O07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 400 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 289 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 348 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 349 ggtcctgaaat 359
>dbj|AK209970.1| Mus musculus cDNA, clone:Y2G0116O15, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 289 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 348 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 349 ggtcctgaaat 359
>dbj|AK207315.1| Mus musculus cDNA, clone:Y2G0107K02, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 397 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 18 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 77 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 78 ggtcctgaaat 88
>dbj|AK193943.1| Mus musculus cDNA, clone:Y1G0113N05, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 410 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 289 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 348 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 349 ggtcctgaaat 359
>dbj|AK193877.1| Mus musculus cDNA, clone:Y1G0113K05, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 398 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 289 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 348 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 349 ggtcctgaaat 359
>dbj|AK191736.1| Mus musculus cDNA, clone:Y1G0106M20, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 429 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 50 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 109 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 110 ggtcctgaaat 120
>gb|AF122048.1|AF122048 Mus musculus p97 ATPase pseudogene, complete sequence Length = 3607 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 1271 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1330 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1331 ggtcctgaaat 1341
>gb|BC043053.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:57954 IMAGE:6418662), complete cds Length = 2898 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 984 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 1043 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 1044 ggtcctgaaat 1054
>emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chromosome X, complete sequence Length = 202972 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 124180 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 124121 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 124120 ggtcctgaaat 124110
>gb|BC046949.1| Xenopus laevis valosin containing protein, mRNA (cDNA clone MGC:52611 IMAGE:5571505), complete cds Length = 3148 Score = 67.9 bits (34), Expect = 4e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 451 ctattggcgtgaagcctccaaagggcatattgctgtttggtccacctggctctggcaaga 510 ||||||| || |||||||| | ||| || |||||| ||| || || ||| |||| || | Sbjct: 846 ctattggagtaaagcctcccaggggaattctgctgtatggacccccaggcactgggaaaa 905 Query: 511 cccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatgg 568 |||| |||||||||||||| ||||||||||| || || |||||||| ||||| ||||| Sbjct: 906 ccctcattgctagagctgtggccaatgaaactggagctttcttcttcctgattaatgg 963
>emb|X54240.1|XLP9715S X.laevis mRNA for p97 subunit of 15S Mg(2+)-ATPase Length = 3286 Score = 67.9 bits (34), Expect = 4e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 451 ctattggcgtgaagcctccaaagggcatattgctgtttggtccacctggctctggcaaga 510 ||||||| || |||||||| | ||| || |||||| ||| || || ||| |||| || | Sbjct: 995 ctattggagtaaagcctcccaggggaattctgctgtatggacccccaggcactgggaaaa 1054 Query: 511 cccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatgg 568 |||| |||||||||||||| ||||||||||| || || |||||||| ||||| ||||| Sbjct: 1055 ccctcattgctagagctgtggccaatgaaaccggagctttcttcttcctgattaatgg 1112
>gb|AC103566.1| Caenorhabditis briggsae cosmid CB024E07, complete sequence Length = 79224 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 522 agagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 ||||| ||||||||||| || |||||||||||||| || |||||||| |||||||| ||| Sbjct: 65068 agagccgttgccaatgagactggtgcattcttcttccttatcaatggtccagaaatcatg 65009 Query: 582 tc 583 || Sbjct: 65008 tc 65007
>ref|XM_392892.2| PREDICTED: Apis mellifera similar to ENSANGP00000022801 (LOC409377), mRNA Length = 3278 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 492 ccacctggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgcattc 551 ||||| ||| |||| || || ||||||||| | |||||||| ||||||||||| |||||| Sbjct: 832 ccaccaggcactggaaaaactcttattgctcgtgctgttgcaaatgaaacaggagcattc 891 Query: 552 ttctttctgatcaatggcccagaaattatg 581 || ||||| || ||||| || ||||||||| Sbjct: 892 ttttttcttattaatggtcctgaaattatg 921
>dbj|AK187846.1| Mus musculus cDNA, clone:Y0G0143D22, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 421 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 290 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 349 Query: 567 gg 568 || Sbjct: 350 gg 351
>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence Length = 124230 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 79649 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 79708 Query: 567 gg 568 || Sbjct: 79709 gg 79710
>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete sequence Length = 208030 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 124930 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 124871 Query: 567 gg 568 || Sbjct: 124870 gg 124869
>dbj|AK211047.1| Mus musculus cDNA, clone:Y2G0120H17, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 384 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || |||||||||||||||||| Sbjct: 289 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaat 348 Query: 567 g 567 | Sbjct: 349 g 349
>ref|NM_201481.1| Danio rerio valosin containing protein (vcp), mRNA Length = 2659 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 444 ttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacctggctct 503 |||||| ||||||| ||||||||||| ||||| |||||| || || ||||| || Sbjct: 782 ttcaaggctattggtgtgaagcctccccgtggcatcctgctgtacggacctcctggaact 841 Query: 504 ggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatc 563 || ||||||||||||||| | ||||| || |||||||| || || |||||||| || ||| Sbjct: 842 ggaaagacccttattgctcgtgctgtggcaaatgaaactggagcgttcttcttcctcatc 901 Query: 564 aatggccc 571 |||||||| Sbjct: 902 aatggccc 909
>dbj|AK197137.1| Mus musculus cDNA, clone:Y1G0124C10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 388 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 509 gacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatgg 568 |||||| |||||| ||||||| || |||||||| || || |||||||||||||||||||| Sbjct: 11 gaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaatgg 70
>gb|BC050488.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:56043 IMAGE:3820156), complete cds Length = 2659 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 444 ttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacctggctct 503 |||||| ||||||| ||||||||||| ||||| |||||| || || ||||| || Sbjct: 782 ttcaaggctattggtgtgaagcctccccgtggcatcctgctgtacggacctcctggaact 841 Query: 504 ggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatc 563 || ||||||||||||||| | ||||| || |||||||| || || |||||||| || ||| Sbjct: 842 ggaaagacccttattgctcgtgctgtggcaaatgaaactggagcgttcttcttcctcatc 901 Query: 564 aatggccc 571 |||||||| Sbjct: 902 aatggccc 909
>dbj|AK216557.1| Mus musculus cDNA, clone:Y2G0138M06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 392 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| ||||||| || |||||||| || || ||||||||||||||| || Sbjct: 13 aagaccctgattgctcgagctgtggcaaatgaaactggagccttcttctttctgatcgat 72 Query: 567 ggcccagaaat 577 || || ||||| Sbjct: 73 ggtccggaaat 83
>ref|XM_424984.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC427410), mRNA Length = 2303 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 72 tgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttgaa 131 |||||||| |||||||||||||||||| | ||| | || || |||||||||||||| ||| Sbjct: 453 tgcccagatgtgaaatacggcaagcgtatccacgtgctgccaattgatgacacagtagaa 512 Query: 132 gg 133 || Sbjct: 513 gg 514 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 488 tggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgc 547 |||||||||||| ||||||| || || ||||| |||| || ||||||||||| || || Sbjct: 872 tggtccacctggtactggcaaaacactgattgcccgagcagtggccaatgaaactggggc 931 Query: 548 attcttctttctgatcaatgg 568 |||||||| ||||| ||||| Sbjct: 932 tttcttcttcctgattaatgg 952
>emb|AJ719285.1| Gallus gallus mRNA for hypothetical protein, clone 1c3 Length = 2934 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 72 tgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttgaa 131 |||||||| |||||||||||||||||| | ||| | || || |||||||||||||| ||| Sbjct: 465 tgcccagatgtgaaatacggcaagcgtatccacgtgctgccaattgatgacacagtagaa 524 Query: 132 gg 133 || Sbjct: 525 gg 526 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 488 tggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgc 547 |||||||||||| ||||||| || || ||||| |||| || ||||||||||| || || Sbjct: 884 tggtccacctggtactggcaaaacactgattgcccgagcagtggccaatgaaactggggc 943 Query: 548 attcttctttctgatcaatggcccagaaattatg 581 |||||||| ||||| ||||| || || |||||| Sbjct: 944 tttcttcttcctgattaatggtcctgagattatg 977
>dbj|AB195711.1| Gallus gallus vcp mRNA for valosin containing protein, complete cds Length = 2916 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 72 tgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttgaa 131 |||||||| |||||||||||||||||| | ||| | || || |||||||||||||| ||| Sbjct: 415 tgcccagatgtgaaatacggcaagcgtatccacgtgctgccaattgatgacacagtagaa 474 Query: 132 gg 133 || Sbjct: 475 gg 476 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 488 tggtccacctggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgc 547 |||||||||||| ||||||| || || ||||| |||| || ||||||||||| || || Sbjct: 834 tggtccacctggtactggcaaaacactgattgcccgagcagtggccaatgaaactggggc 893 Query: 548 attcttctttctgatcaatggcccagaaattatg 581 |||||||| ||||| ||||| || || |||||| Sbjct: 894 tttcttcttcctgattaatggtcctgagattatg 927
>dbj|AK194748.1| Mus musculus cDNA, clone:Y1G0116F01, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 380 Score = 60.0 bits (30), Expect = 9e-06 Identities = 53/61 (86%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaat 566 |||||||| |||||| || |||| || |||||||| || || |||||||||||||||||| Sbjct: 1 aagaccctgattgctcganctgtggcaaatgaaactggagccttcttctttctgatcaat 60 Query: 567 g 567 | Sbjct: 61 g 61
>ref|XM_315644.2| Anopheles gambiae str. PEST ENSANGP00000022801 (ENSANGG00000019258), partial mRNA Length = 2559 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 537 gaaacaggtgcattcttctttctgatcaatggcccagaaattatgtccaa 586 ||||| ||||| |||||||| ||||||||||| || |||||||||||||| Sbjct: 772 gaaaccggtgcgttcttcttcctgatcaatgggccggaaattatgtccaa 821
>ref|XM_627893.1| Cryptosporidium parvum Iowa II CDC48 like AAA ATpase ortholog,transcripts identified by EST (cgd1_330), partial mRNA Length = 2463 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 495 cctggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttc 554 ||||| ||||| ||||| |||||||| | || || || |||||||| || ||||||||| Sbjct: 799 cctggttctggtaagactcttattgcaaaggcagtagcaaatgaaactggagcattcttc 858 Query: 555 tttctgatcaatggcccagaaattatgtc 583 || ||||| ||||| |||||| ||||||| Sbjct: 859 ttcctgattaatggaccagaagttatgtc 887
>dbj|AK203529.1| Mus musculus cDNA, clone:Y1G0145D13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 369 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 509 gacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatgg 568 |||||| |||||| |||||| || |||||||| || || |||||||||||||||||||| Sbjct: 291 gaccctgattgctcgagctgcggcaaatgaaactggagccttcttctttctgatcaatgg 350 Query: 569 c 569 | Sbjct: 351 c 351
>gb|BC067384.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:77072 IMAGE:6960180), complete cds Length = 2635 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 444 ttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacctggctct 503 |||||| ||||||| ||||||||||| ||||| |||||| || || ||||| || Sbjct: 758 ttcaaggctattggtgtgaagcctccccgtggcatcctgctgtacggacctcctggaact 817 Query: 504 ggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatc 563 || |||||||| |||||| | ||||| || |||||||| || || |||||||| || ||| Sbjct: 818 ggaaagaccctcattgctcgtgctgtggcaaatgaaactggagcgttcttcttcctcatc 877 Query: 564 aatggccc 571 |||||||| Sbjct: 878 aatggccc 885
>gb|AY576993.1| Danio rerio clone RK103A4E09 valosin-containing protein mRNA, complete cds Length = 2657 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 444 ttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacctggctct 503 |||||| ||||||| ||||||||||| ||||| |||||| || || ||||| || Sbjct: 819 ttcaaggctattggtgtgaagcctccccgtggcatcctgctgtacggacctcctggaact 878 Query: 504 ggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatc 563 || |||||||| |||||| | ||||| || |||||||| || || |||||||| || ||| Sbjct: 879 ggaaagaccctcattgctcgtgctgtggcaaatgaaactggagcgttcttcttcctcatc 938 Query: 564 aatggccc 571 |||||||| Sbjct: 939 aatggccc 946
>emb|Z49886.1|CEC06A1 Caenorhabditis elegans Cosmid C06A1, complete sequence Length = 20752 Score = 56.0 bits (28), Expect = 1e-04 Identities = 130/164 (79%) Strand = Plus / Minus Query: 378 ggagttaggaagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccct 437 |||||| |||||||| |||| ||||||| ||| |||||||||| ||||| || || || Sbjct: 3267 ggagttcggaagcaattggctcagatcaaggaaatggttgaactgccacttcgacatccc 3208 Query: 438 cagcttttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacct 497 || ||||||||| ||||||| | ||||| ||| || || | || || ||||||||| Sbjct: 3207 caacttttcaaggctattggtatcaagccaccacgtggaattcttctcttcggtccacct 3148 Query: 498 ggctctggcaagacccttattgctagagctgttgccaatgaaac 541 ||| | || ||||| |||||||| | |||||||| |||||||| Sbjct: 3147 ggcacaggaaagactcttattgcacgtgctgttgctaatgaaac 3104 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Minus Query: 111 cctattgatgacacagttgaaggcattactggaaacttgtttgatgccttcttgaaacca 170 |||||||||||||| | ||||| | |||||||||||||| |||| ||| | || ||| Sbjct: 3537 cctattgatgacactatcgaaggactcactggaaacttgttcgatgttttcctcaagcca 3478 Query: 171 tacttccttgaagcttaccg 190 |||||||| || |||||||| Sbjct: 3477 tacttcctggaggcttaccg 3458 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 atgagaagtgtggaattcaaagtt 254 ||||||| |||||||||||||||| Sbjct: 3417 atgagaactgtggaattcaaagtt 3394
>ref|NM_063872.3| Caenorhabditis elegans Cell Division Cycle related family member (cdc-48.1) (cdc-48.1) mRNA, complete cds Length = 2762 Score = 56.0 bits (28), Expect = 1e-04 Identities = 130/164 (79%) Strand = Plus / Plus Query: 378 ggagttaggaagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccct 437 |||||| |||||||| |||| ||||||| ||| |||||||||| ||||| || || || Sbjct: 657 ggagttcggaagcaattggctcagatcaaggaaatggttgaactgccacttcgacatccc 716 Query: 438 cagcttttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacct 497 || ||||||||| ||||||| | ||||| ||| || || | || || ||||||||| Sbjct: 717 caacttttcaaggctattggtatcaagccaccacgtggaattcttctcttcggtccacct 776 Query: 498 ggctctggcaagacccttattgctagagctgttgccaatgaaac 541 ||| | || ||||| |||||||| | |||||||| |||||||| Sbjct: 777 ggcacaggaaagactcttattgcacgtgctgttgctaatgaaac 820 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 111 cctattgatgacacagttgaaggcattactggaaacttgtttgatgccttcttgaaacca 170 |||||||||||||| | ||||| | |||||||||||||| |||| ||| | || ||| Sbjct: 387 cctattgatgacactatcgaaggactcactggaaacttgttcgatgttttcctcaagcca 446 Query: 171 tacttccttgaagcttaccg 190 |||||||| || |||||||| Sbjct: 447 tacttcctggaggcttaccg 466 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 atgagaagtgtggaattcaaagtt 254 ||||||| |||||||||||||||| Sbjct: 507 atgagaactgtggaattcaaagtt 530
>dbj|AB093594.1| Danio rerio CDC48 mRNA, partial cds Length = 2418 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 444 ttcaagtctattggcgtgaagcctccaaagggcatattgctgtttggtccacctggctct 503 |||||| ||||||| ||||||||||| ||||| |||||| || || ||||| || Sbjct: 688 ttcaaggctattggtgtgaagcctccccgtggcatcctgctgtacggacctcctggaact 747 Query: 504 ggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatc 563 || |||||||| |||||| | ||||| || |||||||| || || |||||||| || ||| Sbjct: 748 ggaaagaccctcattgctcgtgctgtggcaaatgaaactggagcgttcttcttcctcatc 807 Query: 564 aatggccc 571 |||||||| Sbjct: 808 aatggccc 815
>dbj|AK113049.1| Ciona intestinalis cDNA, clone:ciad002b13, full insert sequence Length = 2972 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 525 gctgttgccaatgaaacaggtgcattcttctttctgatcaatgg 568 |||||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 863 gctgttgcaaatgaaactggtgctttcttctttctaatcaatgg 906
>gb|BC060518.1| Rattus norvegicus valosin-containing protein, mRNA (cDNA clone MGC:72335 IMAGE:5597843), complete cds Length = 3214 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 523 gagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaat 577 ||||||| || |||||||| || || |||||||||||||||||||| || ||||| Sbjct: 978 gagctgtggcaaatgaaactggagccttcttctttctgatcaatggtcctgaaat 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||| ||||| Sbjct: 566 attgatgacacagtggaaggcatcactgg 594
>ref|XM_385706.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05530.1) partial mRNA Length = 2466 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 387 aagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccctcagcttttc 446 ||||| |||||||||||| |||| ||||||| || || || || || || || |||||| Sbjct: 685 aagcagatggcccagatccgagagatggttgagcttcctctccgacatccccaacttttc 744 Query: 447 aagtctattggcgtgaagcctcc 469 ||||||||||| || |||||||| Sbjct: 745 aagtctattggtgttaagcctcc 767
>ref|XM_505319.1| Yarrowia lipolytica CLIB122, YALI0F12155g predicted mRNA Length = 2445 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 387 aagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccctcagcttttc 446 ||||| |||||||||||| |||| || || || || || ||||| ||||| ||||| ||| Sbjct: 670 aagcagatggcccagatccgagagctagtcgagctgcctctgcggcacccccagctgttc 729 Query: 447 aagtctattgg 457 ||||||||||| Sbjct: 730 aagtctattgg 740
>dbj|AK189857.1| Mus musculus cDNA, clone:Y1G0101A04, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 392 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 507 aagacccttattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaa 565 |||||||| | |||| ||||||| || |||||||| || || ||||||||||||||||| Sbjct: 289 aagaccctgactgctcgagctgtggcaaatgaaactggagccttcttctttctgatcaa 347
>gb|U11760.1|RNU11760 Rattus norvegicus transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2870 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 523 gagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaat 577 ||||||| || |||||||| || || |||||||||||||||||||| || ||||| Sbjct: 1010 gagctgtggcaaatgaaactggagccttcttctttctgatcaatggtcctgaaat 1064 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||| ||||| Sbjct: 598 attgatgacacagtggaaggcatcactgg 626
>ref|NM_053864.2| Rattus norvegicus valosin-containing protein (Vcp), mRNA Length = 3214 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 523 gagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaat 577 ||||||| || |||||||| || || |||||||||||||||||||| || ||||| Sbjct: 978 gagctgtggcaaatgaaactggagccttcttctttctgatcaatggtcctgaaat 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||| ||||| Sbjct: 566 attgatgacacagtggaaggcatcactgg 594
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 387 aagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccctcagcttttc 446 ||||| |||||||||||| |||| || || || || || ||||| ||||| ||||| ||| Sbjct: 1602630 aagcagatggcccagatccgagagctagtcgagctgcctctgcggcacccccagctgttc 1602571 Query: 447 aagtctattgg 457 ||||||||||| Sbjct: 1602570 aagtctattgg 1602560
>emb|Z48334.1|CEF10B5 Caenorhabditis elegans Cosmid F10B5, complete sequence Length = 29132 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 522 agagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 |||||||| ||||| |||||||| ||||||||||| || || || || || ||||||||| Sbjct: 262 agagctgtcgccaacgaaacaggagcattcttcttcctcattaacggaccggaaattatg 321 Query: 582 tc 583 || Sbjct: 322 tc 323
>ref|NM_063304.2| Caenorhabditis elegans Cell Division Cycle related family member (cdc-48.2) (cdc-48.2) mRNA, complete cds Length = 2632 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 522 agagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 |||||||| ||||| |||||||| ||||||||||| || || || || || ||||||||| Sbjct: 870 agagctgtcgccaacgaaacaggagcattcttcttcctcattaacggaccggaaattatg 929 Query: 582 tc 583 || Sbjct: 930 tc 931
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 510 acccttattgctagagctgttgccaatgaa 539 ||||||||||||||||||||||| |||||| Sbjct: 997232 acccttattgctagagctgttgcaaatgaa 997261
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 3 atcagaatgaacaagaccgtcagga 27 ||||||||||||||||||||||||| Sbjct: 6217401 atcagaatgaacaagaccgtcagga 6217377 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 3 atcagaatgaacaagaccgtcagga 27 ||||||||||||||||||||||||| Sbjct: 2149011 atcagaatgaacaagaccgtcagga 2148987 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 3 atcagaatgaacaagaccgtcagga 27 ||||||||||||||||||||||||| Sbjct: 1643694 atcagaatgaacaagaccgtcagga 1643718
>gb|CP000121.1| Anabaena variabilis ATCC 29413 plasmid C, complete sequence Length = 300758 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 3 atcagaatgaacaagaccgtcagga 27 ||||||||||||||||||||||||| Sbjct: 226735 atcagaatgaacaagaccgtcagga 226711
>gb|CP000119.1| Anabaena variabilis ATCC 29413 plasmid A, complete sequence Length = 366354 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 3 atcagaatgaacaagaccgtcagga 27 ||||||||||||||||||||||||| Sbjct: 78045 atcagaatgaacaagaccgtcagga 78021
>gb|BC023563.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:4422977), **** WARNING: chimeric clone **** Length = 5159 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||||||||| Sbjct: 2488 attgatgacacagtggaaggcattactgg 2516
>ref|XM_662183.1| Cryptosporidium hominis TU502 cell division cycle protein 48 (Chro.10043) partial mRNA Length = 2445 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 495 cctggctctggcaagacccttattgctagagctgttgccaatgaaacaggtgcattcttc 554 ||||| ||||| ||||| |||||||| | || || || |||||||| || ||||||||| Sbjct: 781 cctggttctggtaagactcttattgcaaaggcagtagcaaatgaaactggagcattcttc 840 Query: 555 tttctgatcaatggcccagaaattatgtc 583 || |||| ||||| |||||| ||||||| Sbjct: 841 ttcttgattaatggaccagaagttatgtc 869
>gb|BC021055.1| Homo sapiens cDNA clone IMAGE:2822943, **** WARNING: chimeric clone **** Length = 4821 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||||||||| Sbjct: 651 attgatgacacagtggaaggcattactgg 679
>ref|NM_007126.2| Homo sapiens valosin-containing protein (VCP), mRNA Length = 3198 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||||||||| Sbjct: 567 attgatgacacagtggaaggcattactgg 595
>gb|BC096751.1| Homo sapiens cDNA clone IMAGE:5296598, containing frame-shift errors Length = 2894 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||||||||| Sbjct: 603 attgatgacacagtggaaggcattactgg 631
>emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on chromosome 9 Contains a novel gene, the VCP gene for valosin-containing protein, the FANCG gene for Fanconi anemia, complementation group G (FAG, XRCC9), the gene for phosphatidylinositol glycan class O (PIGO), a novel gene, the STOML2 gene for stomatin (EPB72)-like 2 (SLP-2), a novel gene (KIAA1539) (FLJ11560), a zinc finger protein pseudogene, the 5' end of the UNC13 gene for unc-13-like (C. elegans) (hmunc13) and nine CpG islands, complete sequence Length = 195102 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||||||||| Sbjct: 36482 attgatgacacagtggaaggcattactgg 36454
>emb|CR606334.1| full-length cDNA clone CS0DM007YL14 of Fetal liver of Homo sapiens (human) Length = 2858 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||||||||| Sbjct: 594 attgatgacacagtggaaggcattactgg 622
>gb|AC004472.1|AC004472 Homo sapiens chromosome 9, P1 clone 11659, complete sequence Length = 86765 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||||||||| Sbjct: 46681 attgatgacacagtggaaggcattactgg 46653
>gb|AF313485.1|AF313485S1 Homo sapiens tissue-type kidney valosin-containing protein mRNA, partial cds Length = 923 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||||||||| Sbjct: 170 attgatgacacagtggaaggcattactgg 198
>gb|AF100752.1|AF100752 Homo sapiens transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2887 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||||||||| Sbjct: 567 attgatgacacagtggaaggcattactgg 595
>gb|BC110913.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone MGC:131997 IMAGE:6502535), complete cds Length = 3212 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 114 attgatgacacagttgaaggcattactgg 142 |||||||||||||| |||||||||||||| Sbjct: 554 attgatgacacagtggaaggcattactgg 582
>ref|XM_750952.1| Aspergillus fumigatus Af293 cell division control protein Cdc48 (Afu2g17110) partial mRNA Length = 2460 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 543 ggtgcattcttctttctgatcaatggcccagaaattatgtccaa 586 ||||| |||||||| ||||||||||| || ||||| |||||||| Sbjct: 841 ggtgccttcttcttcctgatcaatggtcccgaaatcatgtccaa 884
>gb|AY080962.1| Aspergillus fumigatus Mvp1p (25d9-1), Nha1p (25d9-2), 25D9-9 (25d9-9), 25D9-10 (25d9-10), Ste50p (25d9-3), Cdc48p (25d9-4), 25D9-5p (25d9-5), 25D9-11 (25d9-11), 25D9-6 (25d9-6), Nip7p (25d9-7), Noc3p (25d9-8), and 25D9-12 (25d9-12) genes, complete cds Length = 41396 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 543 ggtgcattcttctttctgatcaatggcccagaaattatgtccaa 586 ||||| |||||||| ||||||||||| || ||||| |||||||| Sbjct: 25645 ggtgccttcttcttcctgatcaatggtcccgaaatcatgtccaa 25602
>ref|XM_948744.1| Theileria annulata strain Ankara transitional endoplasmic reticulum ATPase (TA06500) partial mRNA Length = 2469 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 333 gaggatgaggagaggcttgacgatgttggctatgatgatgttgg 376 ||||| ||||||| |||||||||||| || ||||||||| |||| Sbjct: 622 gaggacgaggagaagcttgacgatgtgggttatgatgatattgg 665 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgaaaccatacttccttgaa 182 |||||||||||||||||||| Sbjct: 452 tgaaaccatacttccttgaa 471
>ref|NM_111200.3| Arabidopsis thaliana DCL2; ATP binding / ATP-dependent helicase/ RNA binding / double-stranded RNA binding / helicase/ nucleic acid binding / ribonu> AT3G03300 (DCL2) mRNA, complete cds Length = 3954 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 496 ctggctctggcaagacccttattgcta 522 |||| |||||||||||||||||||||| Sbjct: 131 ctggttctggcaagacccttattgcta 157
>gb|DQ479970.1| Arabidopsis thaliana dicer-like 2 spliceform 1 mRNA, complete cds, alternatively spliced Length = 4161 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 496 ctggctctggcaagacccttattgcta 522 |||| |||||||||||||||||||||| Sbjct: 131 ctggttctggcaagacccttattgcta 157
>gb|AY606032.1| Oncorhynchus mykiss valosin containing protein mRNA, complete cds Length = 2681 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 357 gttggctatgatgatgttggtggagttaggaagcaaatggcccagat 403 |||||||||||||| ||||||| || |||||||| |||||||||| Sbjct: 444 gttggctatgatgacattggtggtgtgaggaagcagctggcccagat 490 Score = 40.1 bits (20), Expect = 8.0 Identities = 68/84 (80%) Strand = Plus / Plus Query: 71 atgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttga 130 ||||||||||||||| ||||| ||||| | ||| | || || ||||||||||| || || Sbjct: 155 atgcccagacgtgaagtacgggaagcggatccacgttctgcccattgatgacactgtgga 214 Query: 131 aggcattactggaaacttgtttga 154 || || || |||||| ||||||| Sbjct: 215 ggggatcacaggaaacctgtttga 238
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence, complete sequence Length = 96540 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 496 ctggctctggcaagacccttattgcta 522 |||| |||||||||||||||||||||| Sbjct: 6158 ctggttctggcaagacccttattgcta 6184
>ref|XM_652237.1| Entamoeba histolytica HM-1:IMSS cell division cycle protein 48, putative (3.t00077) partial mRNA Length = 2385 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 523 gagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 ||||| ||||||||||||| || || || ||||| || || ||||| |||||||||||| Sbjct: 731 gagctattgccaatgaaactggagcctttttcttccttattaatggaccagaaattatg 789
>ref|XM_718733.1| Plasmodium yoelii yoelii str. 17XNL cell division cycle protein 48 (PY03639) partial mRNA Length = 2448 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 515 tattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccaga 574 ||||||||||||||| || ||||||||||| || || || ||||| || ||||| || || Sbjct: 762 tattgctagagctgtagcaaatgaaacaggggcttttttttttctaataaatggtcccga 821 Query: 575 aattatg 581 | ||||| Sbjct: 822 agttatg 828
>ref|XM_671123.1| Plasmodium berghei strain ANKA cell division cycle protein (PB000171.02.0) partial mRNA Length = 1500 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 515 tattgctagagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccaga 574 ||||||||||||||| || ||||||||||| || || || ||||| || ||||| || || Sbjct: 762 tattgctagagctgtagcaaatgaaacaggggcttttttttttctaataaatggtcccga 821 Query: 575 aattatg 581 | ||||| Sbjct: 822 agttatg 828
>gb|DQ443348.1| Bombyx mori transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2760 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 516 attgctagagctgttgccaatgaaacaggtgcattcttcttt 557 |||||| | |||||||| ||||||||||| || ||||||||| Sbjct: 867 attgctcgtgctgttgctaatgaaacaggagctttcttcttt 908 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 423 ccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctcca 470 ||||||||||| ||| || |||||| ||||||| |||||||||||| Sbjct: 774 ccactgcgtcatccttcactgttcaaggctattggagtgaagcctcca 821
>ref|NM_011188.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 2 (Psmc2), mRNA Length = 1784 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 463 agcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgcta 522 ||||||||||||| || |||||||||| ||||| ||| | |||||||| || ||||| Sbjct: 1022 agcctccaaagggtgtactgctgtttgggccaccaggcacaggcaagacactctgtgcta 1081 Query: 523 gagctgttgccaat 536 | || ||||||||| Sbjct: 1082 gggcagttgccaat 1095
>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence Length = 275646 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 463 agcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgcta 522 ||||||||||||| || |||||||||| ||||| ||| | |||||||| || ||||| Sbjct: 15084 agcctccaaagggtgtactgctgtttgggccaccaggcacaggcaagacactctgtgcta 15143 Query: 523 gagctgttgccaat 536 | || ||||||||| Sbjct: 15144 gggcagttgccaat 15157
>gb|AC113311.9| Mus musculus chromosome 1, clone RP23-440J24, complete sequence Length = 260120 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 agagggaggatgaggagaggct 349 |||||||||||||||||||||| Sbjct: 3997 agagggaggatgaggagaggct 3976
>ref|XM_813585.1| Trypanosoma cruzi strain CL Brener transitional endoplasmic reticulum ATPase (Tc00.1047053509733.170) partial mRNA Length = 2337 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 534 aatgaaacaggtgcattcttctttctgatcaatggccc 571 |||||||||||||||||||| || |||| |||||||| Sbjct: 742 aatgaaacaggtgcattctttttcttgattaatggccc 779
>gb|AC125313.2| Mus musculus BAC clone RP24-353A16 from 5, complete sequence Length = 152433 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Minus Query: 463 agcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgcta 522 ||||||||||||| || |||||||||| ||||| ||| | |||||||| || ||||| Sbjct: 54720 agcctccaaagggtgtactgctgtttgggccaccaggcacaggcaagacactctgtgcta 54661 Query: 523 gagctgttgccaat 536 | || ||||||||| Sbjct: 54660 gggcagttgccaat 54647
>gb|BC005462.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 2, mRNA (cDNA clone MGC:6418 IMAGE:3590739), complete cds Length = 1448 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 463 agcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgcta 522 ||||||||||||| || |||||||||| ||||| ||| | |||||||| || ||||| Sbjct: 670 agcctccaaagggtgtactgctgtttgggccaccaggcacaggcaagacactctgtgcta 729 Query: 523 gagctgttgccaat 536 | || ||||||||| Sbjct: 730 gggcagttgccaat 743
>gb|AC144905.10| Mus musculus chromosome 1, clone RP23-293I7, complete sequence Length = 215928 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 agagggaggatgaggagaggct 349 |||||||||||||||||||||| Sbjct: 182073 agagggaggatgaggagaggct 182052
>dbj|AB244027.1| Bombyx mori ter94 mRNA for transitional endoplasmic reticulum ATPase TER94, complete cds Length = 2721 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 516 attgctagagctgttgccaatgaaacaggtgcattcttcttt 557 |||||| | |||||||| ||||||||||| || ||||||||| Sbjct: 842 attgctcgtgctgttgctaatgaaacaggagctttcttcttt 883 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 423 ccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctcca 470 ||||||||||| ||| || |||||| ||||||| |||||||||||| Sbjct: 749 ccactgcgtcatccttcactgttcaaggctattggagtgaagcctcca 796
>dbj|AK146919.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920075E16 product:proteasome (prosome, macropain) 26S subunit, ATPase 2, full insert sequence Length = 1424 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 463 agcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgcta 522 ||||||||||||| || |||||||||| ||||| ||| | |||||||| || ||||| Sbjct: 661 agcctccaaagggtgtactgctgtttgggccaccaggcacaggcaagacactctgtgcta 720 Query: 523 gagctgttgccaat 536 | || ||||||||| Sbjct: 721 gggcagttgccaat 734
>dbj|AK153413.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830157F19 product:proteasome (prosome, macropain) 26S subunit, ATPase 2, full insert sequence Length = 1427 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 463 agcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgcta 522 ||||||||||||| || |||||||||| ||||| ||| | |||||||| || ||||| Sbjct: 664 agcctccaaagggtgtactgctgtttgggccaccaggcacaggcaagacactctgtgcta 723 Query: 523 gagctgttgccaat 536 | || ||||||||| Sbjct: 724 gggcagttgccaat 737
>dbj|AK168548.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920034A08 product:proteasome (prosome, macropain) 26S subunit, ATPase 2, full insert sequence Length = 1426 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 463 agcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgcta 522 ||||||||||||| || |||||||||| ||||| ||| | |||||||| || ||||| Sbjct: 661 agcctccaaagggtgtactgctgtttgggccaccaggcacaggcaagacactctgtgcta 720 Query: 523 gagctgttgccaat 536 | || ||||||||| Sbjct: 721 gggcagttgccaat 734
>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome Length = 859006 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 tgtttggtccacctggctctgg 505 |||||||||||||||||||||| Sbjct: 234126 tgtttggtccacctggctctgg 234147
>dbj|AK076874.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930525G09 product:PROTEASOME (PROSOME, MACROPAIN) 26S SUBUNIT, ATPASE 2, full insert sequence Length = 1784 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 463 agcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgcta 522 ||||||||||||| || |||||||||| ||||| ||| | |||||||| || ||||| Sbjct: 1022 agcctccaaagggtgtactgctgtttgggccaccaggcacaggcaagacactctgtgcta 1081 Query: 523 gagctgttgccaat 536 | || ||||||||| Sbjct: 1082 gggcagttgccaat 1095
>dbj|AK005083.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500000I15 product:proteasome (prosome, macropain) 26S subunit, ATPase 2, full insert sequence Length = 1406 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 463 agcctccaaagggcatattgctgtttggtccacctggctctggcaagacccttattgcta 522 ||||||||||||| || |||||||||| ||||| ||| | |||||||| || ||||| Sbjct: 643 agcctccaaagggtgtactgctgtttgggccaccaggcacaggcaagacactctgtgcta 702 Query: 523 gagctgttgccaat 536 | || ||||||||| Sbjct: 703 gggcagttgccaat 716
>dbj|AK185530.1| Mus musculus cDNA, clone:Y0G0134G05, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 128 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 gatgacacagttgaaggcattactgg 142 ||||||||||| |||||||||||||| Sbjct: 22 gatgacacagtggaaggcattactgg 47
>gb|AY107250.1| Zea mays PCO068082 mRNA sequence Length = 1198 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 474 ggcatattgctgtttggtccacctgg 499 |||||||| ||||||||||||||||| Sbjct: 611 ggcatattactgtttggtccacctgg 636
>ref|XM_455339.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F05709g predicted mRNA Length = 258 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Minus Query: 522 agagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 |||||||| || || || ||||||||||| ||||| | |||||||| |||||| | ||| Sbjct: 134 agagctgtggctaacgagacaggtgcatttttcttcttaatcaatggtccagaagtcatg 75 Query: 582 tccaa 586 ||||| Sbjct: 74 tccaa 70
>ref|XM_455337.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F05676g predicted mRNA Length = 2493 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 522 agagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 |||||||| || || || ||||||||||| ||||| | |||||||| |||||| | ||| Sbjct: 796 agagctgtggctaacgagacaggtgcatttttcttcttaatcaatggtccagaagtcatg 855 Query: 582 tccaa 586 ||||| Sbjct: 856 tccaa 860
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Minus Query: 522 agagctgttgccaatgaaacaggtgcattcttctttctgatcaatggcccagaaattatg 581 |||||||| || || || ||||||||||| ||||| | |||||||| |||||| | ||| Sbjct: 555103 agagctgtggctaacgagacaggtgcatttttcttcttaatcaatggtccagaagtcatg 555044 Query: 582 tccaa 586 ||||| Sbjct: 555043 tccaa 555039
>emb|BX932506.1| Gallus gallus finished cDNA, clone ChEST626f19 Length = 1189 Score = 42.1 bits (21), Expect = 2.0 Identities = 162/209 (77%) Strand = Plus / Plus Query: 360 ggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaa 419 |||||||||||| ||||||| ||||||| |||| ||||||| ||| |||| ||| Sbjct: 621 ggctatgatgatattggtggctgccggaagcagctggctcagatcaaagagatggtagaa 680 Query: 420 ctcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcata 479 || || || || |||||| ||| |||||| |||| || |||||||||||| || || Sbjct: 681 cttcctctccgacaccctgcgctcttcaaggctataggggtgaagcctccacgtggaatc 740 Query: 480 ttgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaa 539 |||||| |||||| |||||| |||| || || | ||||| |||| || ||||||||| Sbjct: 741 ctgctgtatggtccccctggcactgggaaaactttgattgcccgagcagtggccaatgaa 800 Query: 540 acaggtgcattcttctttctgatcaatgg 568 || || || || ||||| ||||| ||||| Sbjct: 801 actggggcttttttcttcctgattaatgg 829
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 aaacttgtttgatgccttctt 163 ||||||||||||||||||||| Sbjct: 815859 aaacttgtttgatgccttctt 815839
>dbj|AK199616.1| Mus musculus cDNA, clone:Y1G0131M24, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 398 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 549 ttcttctttctgatcaatggcccagaaat 577 |||||||||||||||||||| || ||||| Sbjct: 352 ttcttctttctgatcaatggtcctgaaat 380
>emb|AL929225.6| Zebrafish DNA sequence from clone CH211-250A24, complete sequence Length = 151067 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 cgacactgagatattctgtga 313 ||||||||||||||||||||| Sbjct: 38025 cgacactgagatattctgtga 38005
>dbj|AK117044.1| Ciona intestinalis cDNA, clone:cits021n05, full insert sequence Length = 1493 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 483 ctgtttggtccacctggctctggcaagac 511 |||| ||||||||||||| |||||||||| Sbjct: 535 ctgtatggtccacctggcactggcaagac 563
>dbj|AP004958.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT20B10, TM0135, complete sequence Length = 96988 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 477 atattgctgtttggtccacctggctctggcaagacccttat 517 ||||| ||||||||||||||||| |||| || |||||||| Sbjct: 71241 atattactgtttggtccacctggaactgggaaaacccttat 71201
>gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome 14, complete sequence Length = 252587 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 acttgtttgatgccttcttg 164 |||||||||||||||||||| Sbjct: 246484 acttgtttgatgccttcttg 246465
>gb|BT019198.1| Zea mays clone Contig871.F mRNA sequence Length = 1247 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 atattgctgtttggtccacctggc 500 |||||||| ||||||||||||||| Sbjct: 260 atattgctttttggtccacctggc 283
>gb|AC166156.4| Mus musculus BAC clone RP24-274H19 from chromosome 3, complete sequence Length = 176294 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gtgaggggaggaatgagaag 238 |||||||||||||||||||| Sbjct: 50404 gtgaggggaggaatgagaag 50423
>gb|AC137745.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0041J18, complete sequence Length = 129523 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcaagcgtgtgcacatactt 110 |||||||||||||||||||| Sbjct: 8493 gcaagcgtgtgcacatactt 8512
>ref|XM_359584.1| Magnaporthe grisea 70-15 hypothetical protein (MG05193.4) partial mRNA Length = 2463 Score = 40.1 bits (20), Expect = 8.0 Identities = 56/68 (82%) Strand = Plus / Plus Query: 384 aggaagcaaatggcccagatcagagaactggttgaactcccactgcgtcaccctcagctt 443 |||||||| ||||| |||||| | || |||| || || || ||||| ||||||||||| Sbjct: 682 aggaagcagatggcacagatccgtgagatggtggagcttcctctgcgccaccctcagcta 741 Query: 444 ttcaagtc 451 |||||||| Sbjct: 742 ttcaagtc 749
>ref|XM_423903.1| PREDICTED: Gallus gallus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) (LOC426240), partial mRNA Length = 652 Score = 40.1 bits (20), Expect = 8.0 Identities = 161/208 (77%) Strand = Plus / Plus Query: 360 ggctatgatgatgttggtggagttaggaagcaaatggcccagatcagagaactggttgaa 419 |||||||||||| ||||||| ||||||| |||| ||||||| ||| |||| ||| Sbjct: 445 ggctatgatgatattggtggctgccggaagcagctggctcagatcaaagagatggtagaa 504 Query: 420 ctcccactgcgtcaccctcagcttttcaagtctattggcgtgaagcctccaaagggcata 479 || || || || |||||| ||| |||||| |||| || |||||||||||| || || Sbjct: 505 cttcctctccgacaccctgcgctcttcaaggctataggggtgaagcctccacgtggaatc 564 Query: 480 ttgctgtttggtccacctggctctggcaagacccttattgctagagctgttgccaatgaa 539 |||||| |||||| |||||| |||| || || | ||||| |||| || ||||||||| Sbjct: 565 ctgctgtatggtccccctggcactgggaaaactttgattgcccgagcagtggccaatgaa 624 Query: 540 acaggtgcattcttctttctgatcaatg 567 || || || || ||||| ||||| |||| Sbjct: 625 actggggcttttttcttcctgattaatg 652
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcaagcgtgtgcacatactt 110 |||||||||||||||||||| Sbjct: 121323 gcaagcgtgtgcacatactt 121342
>gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosome 10, complete sequence Length = 178936 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cattactggaaacttgtttg 153 |||||||||||||||||||| Sbjct: 140033 cattactggaaacttgtttg 140052
>gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosome 3, complete sequence Length = 230133 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gtgaggggaggaatgagaag 238 |||||||||||||||||||| Sbjct: 134466 gtgaggggaggaatgagaag 134485
>gb|AC145076.8| Mus musculus chromosome 10, clone RP24-528G5, complete sequence Length = 224534 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cattactggaaacttgtttg 153 |||||||||||||||||||| Sbjct: 6271 cattactggaaacttgtttg 6290
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 tattgctgtttggtccacctggct 501 ||||||| |||||||||||||||| Sbjct: 336878 tattgctttttggtccacctggct 336855
>ref|XM_783508.1| PREDICTED: Strongylocentrotus purpuratus similar to telomere-associated protein RIF1 (LOC583604), mRNA Length = 6837 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 gatcaatggcccagaaatta 579 |||||||||||||||||||| Sbjct: 3929 gatcaatggcccagaaatta 3948
>emb|AL157766.9| Human DNA sequence from clone RP11-40O20 on chromosome 13q12.11-12.2 Contains the 3' end of the SGCG gene for sarcoglycan gamma (35kD dystrophin-associated glycoprotein), the SACS gene for spastic ataxia of Charlevoix-Saguenay (sacsin), a ribosomal protein large P1 (RPLP1) pseudogene and a CpG island, complete sequence Length = 92693 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gggaggatgaggagaggctt 350 |||||||||||||||||||| Sbjct: 37073 gggaggatgaggagaggctt 37054
>emb|CR857842.1| Pongo pygmaeus mRNA; cDNA DKFZp459M1362 (from clone DKFZp459M1362) Length = 2126 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 ttgtttgatgccttcttgaa 166 |||||||||||||||||||| Sbjct: 1479 ttgtttgatgccttcttgaa 1460
>emb|BX548016.7| Zebrafish DNA sequence from clone DKEY-97O7 in linkage group 7, complete sequence Length = 125478 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 527 tgttgccaatgaaacaggtgcatt 550 |||||||| ||||||||||||||| Sbjct: 53844 tgttgccagtgaaacaggtgcatt 53821
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 531 gccaatgaaacaggtgcattcttctttctgatcaatggcccaga 574 |||||||| || ||||| ||||||||||| || ||||| ||||| Sbjct: 721022 gccaatgagactggtgctttcttctttctcattaatgggccaga 721065
>dbj|AK082483.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230055E17 product:tissue inhibitor of metalloproteinase 3, full insert sequence Length = 3369 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cattactggaaacttgtttg 153 |||||||||||||||||||| Sbjct: 3014 cattactggaaacttgtttg 3033
>gb|AC155909.9| Mus musculus 10 BAC RP24-477D23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 195877 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tcctattgatgacacagttg 129 |||||||||||||||||||| Sbjct: 128777 tcctattgatgacacagttg 128758
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcaagcgtgtgcacatactt 110 |||||||||||||||||||| Sbjct: 16480724 gcaagcgtgtgcacatactt 16480743
>gb|AC008762.6|AC008762 Homo sapiens chromosome 19 clone CTD-3182G2, complete sequence Length = 74932 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 agggaggatgaggagaggct 349 |||||||||||||||||||| Sbjct: 48682 agggaggatgaggagaggct 48701
>ref|NM_214280.1| Sus scrofa valosin-containing protein (VCP), mRNA Length = 3147 Score = 40.1 bits (20), Expect = 8.0 Identities = 59/72 (81%) Strand = Plus / Plus Query: 71 atgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttga 130 |||||| || ||||| |||||||| ||| | || |||| || || ||||||||||| || Sbjct: 484 atgccctgatgtgaagtacggcaaacgtatccatgtactacccatcgatgacacagtgga 543 Query: 131 aggcattactgg 142 |||||| ||||| Sbjct: 544 aggcatcactgg 555
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 cacccgacactgagatattc 308 |||||||||||||||||||| Sbjct: 1236751 cacccgacactgagatattc 1236732
>gb|AC136469.2| Homo sapiens chromosome 19 clone RP11-886P16, complete sequence Length = 147180 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 agggaggatgaggagaggct 349 |||||||||||||||||||| Sbjct: 4942 agggaggatgaggagaggct 4923
>gb|AC154499.2| Mus musculus BAC clone RP23-205I1 from 14, complete sequence Length = 202019 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 acttgtttgatgccttcttg 164 |||||||||||||||||||| Sbjct: 10221 acttgtttgatgccttcttg 10202
>ref|NM_211059.1| Eremothecium gossypii AFR158Wp (AFR158W), mRNA Length = 2499 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 531 gccaatgaaacaggtgcattcttctttctgatcaatggcccaga 574 |||||||| || ||||| ||||||||||| || ||||| ||||| Sbjct: 808 gccaatgagactggtgctttcttctttctcattaatgggccaga 851
>emb|BX004766.9| Zebrafish DNA sequence from clone DKEY-5P1 in linkage group 20, complete sequence Length = 214782 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 tgaggggaggaatgagaagt 239 |||||||||||||||||||| Sbjct: 2406 tgaggggaggaatgagaagt 2387
>gb|AY609417.1| Sus scrofa clone Clu_1080.scr.msk.p1.Contig5, mRNA sequence Length = 3968 Score = 40.1 bits (20), Expect = 8.0 Identities = 59/72 (81%) Strand = Plus / Plus Query: 71 atgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttga 130 |||||| || ||||| |||||||| ||| | || |||| || || ||||||||||| || Sbjct: 489 atgccctgatgtgaagtacggcaaacgtatccatgtactacccatcgatgacacagtgga 548 Query: 131 aggcattactgg 142 |||||| ||||| Sbjct: 549 aggcatcactgg 560
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcaagcgtgtgcacatactt 110 |||||||||||||||||||| Sbjct: 16571728 gcaagcgtgtgcacatactt 16571747
>gb|M30143.1|PIGVALA Pig valosin-containing protein (VCP) mRNA, complete cds Length = 3147 Score = 40.1 bits (20), Expect = 8.0 Identities = 59/72 (81%) Strand = Plus / Plus Query: 71 atgcccagacgtgaaatacggcaagcgtgtgcacatacttcctattgatgacacagttga 130 |||||| || ||||| |||||||| ||| | || |||| || || ||||||||||| || Sbjct: 484 atgccctgatgtgaagtacggcaaacgtatccatgtactacccatcgatgacacagtgga 543 Query: 131 aggcattactgg 142 |||||| ||||| Sbjct: 544 aggcatcactgg 555
>gb|AC091404.2| Sus scrofa clone RP44-74O11, complete sequence Length = 102386 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 tcctttaaggaagggagatctttt 214 ||||||||||||||||||| |||| Sbjct: 95132 tcctttaaggaagggagatatttt 95155 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,562,359 Number of Sequences: 3902068 Number of extensions: 5562359 Number of successful extensions: 119676 Number of sequences better than 10.0: 200 Number of HSP's better than 10.0 without gapping: 199 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 118953 Number of HSP's gapped (non-prelim): 704 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
