ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart26g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kina... 30 3.6
2ZBT38_RAT (Q5EXX3) Zinc finger and BTB domain-containing protein... 30 4.6
3CP1B1_HUMAN (Q16678) Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1) 29 7.9
4C89A2_ARATH (Q42602) Cytochrome P450 89A2 (EC 1.14.-.-) (CYPLXXX... 29 7.9

>M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kinase kinase 4|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK
           kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK)
           (Nck-interacting kinase)
          Length = 1239

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 62  PPVPKHSRSFSCSTNEASPPESQRPVCP 145
           PPVP  S SFS   +E+  P  QRP  P
Sbjct: 594 PPVPSRSESFSNGNSESVHPALQRPAEP 621



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>ZBT38_RAT (Q5EXX3) Zinc finger and BTB domain-containing protein 38 (Zinc|
           finger protein expressed in neurons) (Zenon)
          Length = 1203

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 17  YSPCMLRVSVHASNFPPVPKHSRSFSCSTNEASPPESQRPVCP 145
           YS  +  V VH+S F  V KHS + +C  N      SQ    P
Sbjct: 701 YSGLVPSVIVHSSQFSSVIKHSNAIACLANSNHQSPSQPVASP 743



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>CP1B1_HUMAN (Q16678) Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)|
          Length = 543

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = +2

Query: 374 RLARAYGPVYSFAPLGLARPMIFVAARGPAHRALVQQGXXXXXXXXXXXXXXXVLTSGGR 553
           RLAR YG V+    LG   P++ +      H+ALVQQG                + SGGR
Sbjct: 76  RLARRYGDVFQIR-LGSC-PIVVLNGERAIHQALVQQGSAFADRPAFASFR---VVSGGR 130

Query: 554 NVS 562
           +++
Sbjct: 131 SMA 133



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>C89A2_ARATH (Q42602) Cytochrome P450 89A2 (EC 1.14.-.-) (CYPLXXXIX) (ATH 6-1)|
          Length = 506

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +2

Query: 356 LEPVLRRLARAYGPVYSFAPLGLARPMIFVAARGPAHRALVQQG 487
           LE  LR +    GP+ +      +RP IFVA R   H ALV  G
Sbjct: 54  LESYLRSVHHRLGPIVTLRIT--SRPAIFVADRSLTHEALVLNG 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,378,869
Number of Sequences: 219361
Number of extensions: 728907
Number of successful extensions: 2820
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2819
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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