ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart25f12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_479772.1| Oryza sativa (japonica cultivar-group), mRNA 84 5e-13
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
3dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
4dbj|AK100461.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 5e-13
5ref|NM_189657.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
6ref|NM_190363.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
8dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
9dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
10dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
11dbj|AK119868.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.11
13ref|XM_745645.1| Aspergillus fumigatus Af293 inorganic diphospha... 46 0.11
14gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
16gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
17gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.11
18dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
19dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
20ref|XM_417875.1| PREDICTED: Gallus gallus similar to Sorting nex... 44 0.44
21ref|XM_476075.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
22ref|XM_976638.1| PREDICTED: Mus musculus gene model 1078, (NCBI)... 42 1.8
23ref|XM_911944.2| PREDICTED: Mus musculus gene model 1078, (NCBI)... 42 1.8
24ref|XM_355840.5| PREDICTED: Mus musculus gene model 1078, (NCBI)... 42 1.8
25gb|AC025456.7| Homo sapiens chromosome 5 clone CTD-2197O4, compl... 42 1.8
26dbj|AK138915.1| Mus musculus adult male aorta and vein cDNA, RIK... 42 1.8
27gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 1.8
28gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genom... 42 1.8
29dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
30gb|AC157563.12| Mus musculus chromosome 7, clone RP23-414I24, co... 42 1.8
31gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
32gb|AC138604.5| Mus musculus BAC clone RP24-236J11 from chromosom... 40 6.9
33ref|XM_517941.1| PREDICTED: Pan troglodytes similar to Ptx1 (LOC... 40 6.9
34ref|NM_015711.1| Homo sapiens glioma tumor suppressor candidate ... 40 6.9
35gb|AC120889.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
36gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
37gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 6.9
38emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.9
39gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 6.9
40emb|AL136128.9| Human DNA sequence from clone RP1-84N20 on chrom... 40 6.9
41gb|AF539828.1| Mycosphaerella sp. 2 SAP154 strain SAP154 laccase... 40 6.9
42emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 6.9
43emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 6.9
44emb|AL445066.1|TACID4 Thermoplasma acidophilum complete genome; ... 40 6.9
45gb|AC010519.8| Homo sapiens chromosome 19 clone LLNLR-261D9, com... 40 6.9
46gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 6.9
47dbj|AK097153.1| Homo sapiens cDNA FLJ39834 fis, clone SPLEN20140... 40 6.9
48gb|AE011990.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.9
49gb|AE012454.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.9
50ref|NM_137155.2| Drosophila melanogaster lethal (2) k08015 CG102... 40 6.9
51gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, comple... 40 6.9
52gb|AC008472.8| Homo sapiens chromosome 5 clone CTC-367J11, compl... 40 6.9
53gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.9
54gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.9
55gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.9
56gb|AY686748.1| Rubrivivax gelatinosus strain 1 GprR (gprR) gene,... 40 6.9
57dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
58dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
59dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
60gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, r... 40 6.9
61gb|AF182077.1|AF182077 Homo sapiens glioma tumor suppressor cand... 40 6.9
62dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, c... 40 6.9
63dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
64gb|AY107613.1| Zea mays PCO107505 mRNA sequence 40 6.9
65gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37... 40 6.9
66gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.9
67gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
68gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
69emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4,... 40 6.9
70dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.9

>ref|XM_479772.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1767

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 436 acggacgagcagcgtcacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggct 495
           ||||| |||||||| |||||||||||||||||||||||||| |||||||| || ||||| 
Sbjct: 284 acggaggagcagcggcacgccatcgcgctcgccgtggcgacggcggcgaccgcggaggcg 343

                         
Query: 496 gccgtggccacggc 509
           || ||||| |||||
Sbjct: 344 gcggtggcgacggc 357



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 124/155 (80%), Gaps = 6/155 (3%)
 Strand = Plus / Plus

                                                                       
Query: 208 tggctcaccgccgtcaagcgggcctttcgctcgccgtccaaggaggacagccccaagaag 267
           |||||||||||||||||||| ||||| ||||| || || ||||| |||  |||||| |||
Sbjct: 74  tggctcaccgccgtcaagcgcgccttccgctccccctctaaggacgactcccccaacaag 133

                                                                       
Query: 268 tctgcacgcctgcgcgaggaccccgacgccgacgaggataagaccaagagggagaggagg 327
            | || ||||| |||||      |||| ||||||| || |||  |||||||||| |  | 
Sbjct: 134 gccgcccgcctccgcga------cgacaccgacgacgacaagggcaagagggagcgccgc 187

                                              
Query: 328 agatggctcttcaggagatcctcgtccccgtctcc 362
           ||||||||||||||||  |||||||| ||||||||
Sbjct: 188 agatggctcttcaggaagtcctcgtcgccgtctcc 222



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                          
Query: 436    acggacgagcagcgtcacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggct 495
              ||||| |||||||| |||||||||||||||||||||||||| |||||||| || ||||| 
Sbjct: 790776 acggaggagcagcggcacgccatcgcgctcgccgtggcgacggcggcgaccgcggaggcg 790717

                            
Query: 496    gccgtggccacggc 509
              || ||||| |||||
Sbjct: 790716 gcggtggcgacggc 790703



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                          
Query: 208    tggctcaccgccgtcaagcgggcctttcgctcgccgtccaaggaggacagccccaagaag 267
              |||||||||||||||||||| ||||| ||||| || || ||||| |||  |||||| |||
Sbjct: 791063 tggctcaccgccgtcaagcgcgccttccgctccccctctaaggacgactcccccaacaag 791004

                                               
Query: 268    tctgcacgcctgcgcgaggaccccgacgccgac 300
               | || ||||| ||||| ||| |||||| ||||
Sbjct: 791003 gccgcccgcctccgcgacgacaccgacgacgac 790971



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 328    agatggctcttcaggagatcctcgtccccgtctcc 362
              ||||||||||||||||  |||||||| ||||||||
Sbjct: 790872 agatggctcttcaggaagtcctcgtcgccgtctcc 790838



to top

>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0427G12
          Length = 185545

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 436   acggacgagcagcgtcacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggct 495
             ||||| |||||||| |||||||||||||||||||||||||| |||||||| || ||||| 
Sbjct: 89996 acggaggagcagcggcacgccatcgcgctcgccgtggcgacggcggcgaccgcggaggcg 89937

                           
Query: 496   gccgtggccacggc 509
             || ||||| |||||
Sbjct: 89936 gcggtggcgacggc 89923



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                         
Query: 208   tggctcaccgccgtcaagcgggcctttcgctcgccgtccaaggaggacagccccaagaag 267
             |||||||||||||||||||| ||||| ||||| || || ||||| |||  |||||| |||
Sbjct: 90283 tggctcaccgccgtcaagcgcgccttccgctccccctctaaggacgactcccccaacaag 90224

                                              
Query: 268   tctgcacgcctgcgcgaggaccccgacgccgac 300
              | || ||||| ||||| ||| |||||| ||||
Sbjct: 90223 gccgcccgcctccgcgacgacaccgacgacgac 90191



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 328   agatggctcttcaggagatcctcgtccccgtctcc 362
             ||||||||||||||||  |||||||| ||||||||
Sbjct: 90092 agatggctcttcaggaagtcctcgtcgccgtctcc 90058



to top

>dbj|AK100461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091O18, full
           insert sequence
          Length = 1767

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 436 acggacgagcagcgtcacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggct 495
           ||||| |||||||| |||||||||||||||||||||||||| |||||||| || ||||| 
Sbjct: 284 acggaggagcagcggcacgccatcgcgctcgccgtggcgacggcggcgaccgcggaggcg 343

                         
Query: 496 gccgtggccacggc 509
           || ||||| |||||
Sbjct: 344 gcggtggcgacggc 357



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 124/155 (80%), Gaps = 6/155 (3%)
 Strand = Plus / Plus

                                                                       
Query: 208 tggctcaccgccgtcaagcgggcctttcgctcgccgtccaaggaggacagccccaagaag 267
           |||||||||||||||||||| ||||| ||||| || || ||||| |||  |||||| |||
Sbjct: 74  tggctcaccgccgtcaagcgcgccttccgctccccctctaaggacgactcccccaacaag 133

                                                                       
Query: 268 tctgcacgcctgcgcgaggaccccgacgccgacgaggataagaccaagagggagaggagg 327
            | || ||||| |||||      |||| ||||||| || |||  |||||||||| |  | 
Sbjct: 134 gccgcccgcctccgcga------cgacaccgacgacgacaagggcaagagggagcgccgc 187

                                              
Query: 328 agatggctcttcaggagatcctcgtccccgtctcc 362
           ||||||||||||||||  |||||||| ||||||||
Sbjct: 188 agatggctcttcaggaagtcctcgtcgccgtctcc 222



to top

>ref|NM_189657.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1398

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 451 cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggc 503
           |||||||||||| |||||| ||||||||||||  |||| || || ||||||||
Sbjct: 259 cacgccatcgcggtcgccgcggcgaccgcggctgcggcggacgcggccgtggc 311



to top

>ref|NM_190363.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2844

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 462 gctcgccgtggcgaccgcggcgacggccg 490
           ||||||||||||| |||||||||||||||
Sbjct: 42  gctcgccgtggcggccgcggcgacggccg 70



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 462      gctcgccgtggcgaccgcggcgacggccg 490
                ||||||||||||| |||||||||||||||
Sbjct: 35078806 gctcgccgtggcggccgcggcgacggccg 35078778



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 451     cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggc 503
               |||||||||||| |||||| ||||||||||||  |||| || || ||||||||
Sbjct: 4825961 cacgccatcgcggtcgccgcggcgaccgcggctgcggcggacgcggccgtggc 4826013



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 312      caagagggagaggaggagatggc 334
                |||||||||||||||||||||||
Sbjct: 22690182 caagagggagaggaggagatggc 22690204



to top

>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485B12
          Length = 156047

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 462   gctcgccgtggcgaccgcggcgacggccg 490
             ||||||||||||| |||||||||||||||
Sbjct: 85956 gctcgccgtggcggccgcggcgacggccg 85928



to top

>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0703B11
          Length = 144074

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 462    gctcgccgtggcgaccgcggcgacggccg 490
              ||||||||||||| |||||||||||||||
Sbjct: 123034 gctcgccgtggcggccgcggcgacggccg 123006



to top

>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0710E05
          Length = 179714

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 451   cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggc 503
             |||||||||||| |||||| ||||||||||||  |||| || || ||||||||
Sbjct: 70610 cacgccatcgcggtcgccgcggcgaccgcggctgcggcggacgcggccgtggc 70662



to top

>dbj|AK119868.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B12, full
           insert sequence
          Length = 1834

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 451 cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggc 503
           |||||||||||| |||||| ||||||||||||  |||| || || ||||||||
Sbjct: 372 cacgccatcgcggtcgccgcggcgaccgcggctgcggcggacgcggccgtggc 424



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                          
Query: 451     cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggccacggc 509
               |||||||| ||| |||| ||||||||||||||  | ||||| || ||||||||| ||||
Sbjct: 3292496 cacgccatggcggtcgcggtggcgaccgcggccgccgccgacgccgccgtggccgcggc 3292554



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 314      agagggagaggaggagatggc 334
                |||||||||||||||||||||
Sbjct: 30251165 agagggagaggaggagatggc 30251145



to top

>ref|XM_745645.1| Aspergillus fumigatus Af293 inorganic diphosphatase (Afu6g08490)
           partial mRNA
          Length = 1011

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 153 cagcaaccgcgagccggtggtgc 175
           |||||||||||||||||||||||
Sbjct: 345 cagcaaccgcgagccggtggtgc 367



to top

>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12,
              complete sequence
          Length = 177327

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 451    cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggccacggc 509
              |||||||| ||| |||| ||||||||||||||  | ||||| || ||||||||| ||||
Sbjct: 136718 cacgccatggcggtcgcggtggcgaccgcggccgccgccgacgccgccgtggccgcggc 136660



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                          
Query: 451     cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggccacggc 509
               |||||||| ||| |||| ||||||||||||||  | ||||| || ||||||||| ||||
Sbjct: 3292607 cacgccatggcggtcgcggtggcgaccgcggccgccgccgacgccgccgtggccgcggc 3292665



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 314      agagggagaggaggagatggc 334
                |||||||||||||||||||||
Sbjct: 30342587 agagggagaggaggagatggc 30342567



to top

>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16,
              complete sequence
          Length = 145590

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 451    cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggccacggc 509
              |||||||| ||| |||| ||||||||||||||  | ||||| || ||||||||| ||||
Sbjct: 117369 cacgccatggcggtcgcggtggcgaccgcggccgccgccgacgccgccgtggccgcggc 117427



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 453     cgccatcgcgctcgccgtggcga 475
               |||||||||||||||||||||||
Sbjct: 3984807 cgccatcgcgctcgccgtggcga 3984829



to top

>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0024F06
          Length = 129402

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 312   caagagggagaggaggagatggc 334
             |||||||||||||||||||||||
Sbjct: 66894 caagagggagaggaggagatggc 66916



to top

>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0712E02
          Length = 158084

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 312  caagagggagaggaggagatggc 334
            |||||||||||||||||||||||
Sbjct: 7571 caagagggagaggaggagatggc 7593



to top

>ref|XM_417875.1| PREDICTED: Gallus gallus similar to Sorting nexin 19 (LOC419734),
            mRNA
          Length = 2771

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 248  aggaggacagccccaagaagtc 269
            ||||||||||||||||||||||
Sbjct: 1025 aggaggacagccccaagaagtc 1046



to top

>ref|XM_476075.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1494

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 451 cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggc 503
           |||||||||||  |||||| ||| ||||||||| |||| || || ||||||||
Sbjct: 250 cacgccatcgccgtcgccgcggccaccgcggcggcggctgatgccgccgtggc 302



to top

>ref|XM_976638.1| PREDICTED: Mus musculus gene model 1078, (NCBI) (Gm1078), mRNA
          Length = 3146

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 313  aagagggagaggaggagatgg 333
            |||||||||||||||||||||
Sbjct: 1510 aagagggagaggaggagatgg 1490



to top

>ref|XM_911944.2| PREDICTED: Mus musculus gene model 1078, (NCBI) (Gm1078), mRNA
          Length = 3160

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 313  aagagggagaggaggagatgg 333
            |||||||||||||||||||||
Sbjct: 1510 aagagggagaggaggagatgg 1490



to top

>ref|XM_355840.5| PREDICTED: Mus musculus gene model 1078, (NCBI) (Gm1078), mRNA
          Length = 3146

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 313  aagagggagaggaggagatgg 333
            |||||||||||||||||||||
Sbjct: 1510 aagagggagaggaggagatgg 1490



to top

>gb|AC025456.7| Homo sapiens chromosome 5 clone CTD-2197O4, complete sequence
          Length = 139086

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 310   accaagagggagaggaggaga 330
             |||||||||||||||||||||
Sbjct: 85651 accaagagggagaggaggaga 85631



to top

>dbj|AK138915.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530002D02 product:hypothetical
            Protein kinase/Serine/threonine protein kinase/Tyrosine
            protein kinase/Protein kinase domain profile/Proline-rich
            region profile/Protein kinase-like/Myb DNA-binding
            domain/Serine/threonine protein kinase, active site
            containing protein, full insert sequence
          Length = 3154

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 313  aagagggagaggaggagatgg 333
            |||||||||||||||||||||
Sbjct: 1518 aagagggagaggaggagatgg 1498



to top

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 443     agcagcgtcacgccatcgcgc 463
               |||||||||||||||||||||
Sbjct: 4315060 agcagcgtcacgccatcgcgc 4315080



to top

>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete
             sequence
          Length = 130359

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   agagggagaggaggagatggc 334
             |||||||||||||||||||||
Sbjct: 42845 agagggagaggaggagatggc 42825



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                    
Query: 451     cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggc 503
               |||||||||||  |||||| ||| ||||||||| |||| || || ||||||||
Sbjct: 5308984 cacgccatcgccgtcgccgcggccaccgcggcggcggctgatgccgccgtggc 5309036



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 404      cggcggcgaggtcggcacct 423
                ||||||||||||||||||||
Sbjct: 15568025 cggcggcgaggtcggcacct 15568044



to top

>gb|AC157563.12| Mus musculus chromosome 7, clone RP23-414I24, complete sequence
          Length = 200040

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 313    aagagggagaggaggagatgg 333
              |||||||||||||||||||||
Sbjct: 133798 aagagggagaggaggagatgg 133818



to top

>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 451   cacgccatcgcgctcgccgtggcgaccgcggcgacggccgaggctgccgtggc 503
             |||||||||||  |||||| ||| ||||||||| |||| || || ||||||||
Sbjct: 45685 cacgccatcgccgtcgccgcggccaccgcggcggcggctgatgccgccgtggc 45737



to top

>gb|AC138604.5| Mus musculus BAC clone RP24-236J11 from chromosome 15, complete
             sequence
          Length = 196777

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 309   gaccaagagggagaggaggagatg 332
             ||||||||||||||| ||||||||
Sbjct: 97570 gaccaagagggagagaaggagatg 97547



to top

>ref|XM_517941.1| PREDICTED: Pan troglodytes similar to Ptx1 (LOC462072), mRNA
          Length = 1736

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 6   ccccactgcccgcgcctgccagccgcgg 33
           |||||||||||||||| |||| ||||||
Sbjct: 592 ccccactgcccgcgccggccacccgcgg 565



to top

>ref|NM_015711.1| Homo sapiens glioma tumor suppressor candidate region gene 1
            (GLTSCR1), mRNA
          Length = 5698

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    gccccccactgcccgcgcctgcca 26
            ||||| ||||||||||||||||||
Sbjct: 4345 gccccgcactgcccgcgcctgcca 4368



to top

>gb|AC120889.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0018K14, complete sequence
          Length = 152725

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ccgcgcctgccagccgcggc 34
             ||||||||||||||||||||
Sbjct: 40268 ccgcgcctgccagccgcggc 40287



to top

>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064E13,
              complete sequence
          Length = 150158

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     ccgcgcctgccagccgcggc 34
              ||||||||||||||||||||
Sbjct: 129458 ccgcgcctgccagccgcggc 129477



to top

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 381     cgcgccgccggagcagcagc 400
               ||||||||||||||||||||
Sbjct: 3550380 cgcgccgccggagcagcagc 3550399



to top

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 445     cagcgtcacgccatcgcgctcgcc 468
               ||||||||||||| ||||||||||
Sbjct: 4094233 cagcgtcacgccaccgcgctcgcc 4094256



to top

>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    gccgtggcgaccgcggcgac 485
              ||||||||||||||||||||
Sbjct: 731102 gccgtggcgaccgcggcgac 731121



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 472   gcgaccgcggcgacggccgaggctgccg 499
             ||||| |||||| |||||||||||||||
Sbjct: 98989 gcgacagcggcggcggccgaggctgccg 98962



to top

>emb|AL136128.9| Human DNA sequence from clone RP1-84N20 on chromosome 6 Contains a
             novel gene, the 5' end of the TPD52L1 gene encoding two
             variants of tumor protein D52-like 1 protein and two CpG
             islands, complete sequence
          Length = 151875

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   aaggaggacagccccaagaa 266
             ||||||||||||||||||||
Sbjct: 77856 aaggaggacagccccaagaa 77875



to top

>gb|AF539828.1| Mycosphaerella sp. 2 SAP154 strain SAP154 laccase gene, partial cds
          Length = 1063

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  aatcggcggcgaggtcggca 420
            ||||||||||||||||||||
Sbjct: 1035 aatcggcggcgaggtcggca 1016



to top

>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 465    cgccgtggcgaccgcggcgacggc 488
              ||||| ||||||||||||||||||
Sbjct: 106964 cgccgcggcgaccgcggcgacggc 106987



to top

>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 471     ggcgaccgcggcgacggccg 490
               ||||||||||||||||||||
Sbjct: 1078488 ggcgaccgcggcgacggccg 1078469



to top

>emb|AL445066.1|TACID4 Thermoplasma acidophilum complete genome; segment 4/5
          Length = 297750

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    tggctcttcaggagatcctc 350
              ||||||||||||||||||||
Sbjct: 253629 tggctcttcaggagatcctc 253648



to top

>gb|AC010519.8| Homo sapiens chromosome 19 clone LLNLR-261D9, complete sequence
          Length = 46741

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     gccccccactgcccgcgcctgcca 26
             ||||| ||||||||||||||||||
Sbjct: 24998 gccccgcactgcccgcgcctgcca 25021



to top

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 309     gaccaagagggagaggagga 328
               ||||||||||||||||||||
Sbjct: 1202124 gaccaagagggagaggagga 1202105



to top

>dbj|AK097153.1| Homo sapiens cDNA FLJ39834 fis, clone SPLEN2014041, highly similar to
            Homo sapiens glioma tumor suppressor candidate region
            protein 1 (GLTSCR1) mRNA
          Length = 3321

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    gccccccactgcccgcgcctgcca 26
            ||||| ||||||||||||||||||
Sbjct: 1914 gccccgcactgcccgcgcctgcca 1937



to top

>gb|AE011990.1| Xanthomonas axonopodis pv. citri str. 306,  section 368 of 469 of the
             complete genome
          Length = 12292

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 445   cagcgtcacgccatcgcgctcgcc 468
             ||||||||||||| ||||||||||
Sbjct: 10639 cagcgtcacgccaccgcgctcgcc 10662



to top

>gb|AE012454.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 362
            of 460 of the complete genome
          Length = 11605

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  cgcgagccggtggtgcccgc 179
            ||||||||||||||||||||
Sbjct: 6147 cgcgagccggtggtgcccgc 6128



to top

>ref|NM_137155.2| Drosophila melanogaster lethal (2) k08015 CG10228-RA (l(2)k08015),
            mRNA
          Length = 6068

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 303  ggataagaccaagagggaga 322
            ||||||||||||||||||||
Sbjct: 2915 ggataagaccaagagggaga 2934



to top

>gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, complete sequence
          Length = 178030

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 6     ccccactgcccgcgcctgccagccgcgg 33
             |||||||||||||||| |||| ||||||
Sbjct: 22719 ccccactgcccgcgccggccacccgcgg 22746



to top

>gb|AC008472.8| Homo sapiens chromosome 5 clone CTC-367J11, complete sequence
          Length = 107733

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 309   gaccaagagggagaggaggagatg 332
             |||||||||||| |||||||||||
Sbjct: 82871 gaccaagagggaaaggaggagatg 82848



to top

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    gcgtcacgccatcgcgctcg 466
              ||||||||||||||||||||
Sbjct: 396580 gcgtcacgccatcgcgctcg 396599



to top

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 463     ctcgccgtggcgaccgcggcgacggccg 490
               ||||||| | ||||||||||||||||||
Sbjct: 2587512 ctcgccgcgacgaccgcggcgacggccg 2587539



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 403     tcggcggcgaggtcggcacc 422
               ||||||||||||||||||||
Sbjct: 1339037 tcggcggcgaggtcggcacc 1339018



to top

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    cgcgagccggtggtgcccgc 179
              ||||||||||||||||||||
Sbjct: 965803 cgcgagccggtggtgcccgc 965822



to top

>gb|AY686748.1| Rubrivivax gelatinosus strain 1 GprR (gprR) gene, partial cds; Rieske
            iron-sulfur protein (petA2) gene, complete cds; and FdxA
            (fdxA) gene, partial cds
          Length = 2234

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 464  tcgccgtggcgaccgcggcg 483
            ||||||||||||||||||||
Sbjct: 1035 tcgccgtggcgaccgcggcg 1016



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 383      cgccgccggagcagcagcaa 402
                ||||||||||||||||||||
Sbjct: 28341002 cgccgccggagcagcagcaa 28341021



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 15       ccgcgcctgccagccgcggc 34
                ||||||||||||||||||||
Sbjct: 20120244 ccgcgcctgccagccgcggc 20120263



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 382     gcgccgccggagcagcagca 401
               ||||||||||||||||||||
Sbjct: 3836028 gcgccgccggagcagcagca 3836009



to top

>gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, region 51B-51C, BAC clone
              BACR03K23, complete sequence
          Length = 160346

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    ggataagaccaagagggaga 322
              ||||||||||||||||||||
Sbjct: 141275 ggataagaccaagagggaga 141256



to top

>gb|AF182077.1|AF182077 Homo sapiens glioma tumor suppressor candidate region protein 1
            (GLTSCR1) mRNA, complete cds
          Length = 5698

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    gccccccactgcccgcgcctgcca 26
            ||||| ||||||||||||||||||
Sbjct: 4345 gccccgcactgcccgcgcctgcca 4368



to top

>dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, complete sequence
          Length = 87093

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 361   ccttccccggcgtctgctaccgcg 384
             |||||||||||||| |||||||||
Sbjct: 27495 ccttccccggcgtcagctaccgcg 27518



to top

>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1080A02
          Length = 151360

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   gcgccgccggagcagcagca 401
             ||||||||||||||||||||
Sbjct: 75544 gcgccgccggagcagcagca 75525



to top

>gb|AY107613.1| Zea mays PCO107505 mRNA sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 gcgccgccggagcagcagca 401
           ||||||||||||||||||||
Sbjct: 646 gcgccgccggagcagcagca 627



to top

>gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37 of 73 of the complete
              sequence
          Length = 266851

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    ggataagaccaagagggaga 322
              ||||||||||||||||||||
Sbjct: 233618 ggataagaccaagagggaga 233599



to top

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 457     atcgcgctcgccgtggcgaccgcg 480
               ||||||||||||| ||||||||||
Sbjct: 1575151 atcgcgctcgccgcggcgaccgcg 1575128



to top

>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0049D13, complete sequence
          Length = 136942

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   cggcggcgaggtcggcacct 423
             ||||||||||||||||||||
Sbjct: 99855 cggcggcgaggtcggcacct 99874



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 15       ccgcgcctgccagccgcggc 34
                ||||||||||||||||||||
Sbjct: 20405350 ccgcgcctgccagccgcggc 20405369



to top

>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10,
              complete sequence
          Length = 150957

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    cgccgccggagcagcagcaa 402
              ||||||||||||||||||||
Sbjct: 133310 cgccgccggagcagcagcaa 133329



to top

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 471     ggcgaccgcggcgacggccg 490
               ||||||||||||||||||||
Sbjct: 2588174 ggcgaccgcggcgacggccg 2588193


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,014,789
Number of Sequences: 3902068
Number of extensions: 4014789
Number of successful extensions: 93675
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90927
Number of HSP's gapped (non-prelim): 2748
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top