ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart24b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MSBP1_ARATH (Q9XFM6) Membrane steroid-binding protein 1 (AtMP1) 186 4e-47
2SBP2_ARATH (Q9M2Z4) Putative steroid binding protein 2 (AtMP2) 183 2e-46
3SBP3_ARATH (Q9SK39) Putative steroid-binding protein 3 (AtMP3) 93 6e-19
4NENF_MOUSE (Q9CQ45) Neudesin precursor (Neuron-derived neurotrop... 89 6e-18
5NENF_RAT (Q6IUR5) Neudesin precursor (Neuron-derived neurotrophi... 89 1e-17
6NENF_HUMAN (Q9UMX5) Neudesin precursor (Neuron-derived neurotrop... 85 1e-16
7PGRC1_RAT (P70580) Membrane-associated progesterone receptor com... 79 1e-14
8PGRC1_PIG (Q95250) Membrane-associated progesterone receptor com... 77 3e-14
9PGRC1_MOUSE (O55022) Membrane-associated progesterone receptor c... 77 3e-14
10PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor c... 75 2e-13
11PGRC2_MOUSE (Q80UU9) Membrane associated progesterone receptor c... 74 3e-13
12PGRC1_HUMAN (O00264) Membrane-associated progesterone receptor c... 74 3e-13
13PGRC2_RAT (Q5XIU9) Membrane associated progesterone receptor com... 74 3e-13
14YL81_SCHPO (O13995) Hypothetical protein C25B8.01 in chromosome I 70 4e-12
15DAP1_YEAST (Q12091) Damage response protein 1 67 3e-11
16GLPK_XANCP (Q8PDI0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol ... 32 0.92
17GLPK_XANAC (Q8PQG7) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol ... 32 1.2
18GLPK_ENTFA (O34154) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol ... 32 1.6
19Y3770_BACSK (Q5WBF8) UPF0271 protein ABC3770 32 1.6
20GLPK_LACLA (Q9CG64) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol ... 30 5.9
21DX26B_MOUSE (Q8BND4) Protein DDX26B 29 7.8

>MSBP1_ARATH (Q9XFM6) Membrane steroid-binding protein 1 (AtMP1)|
          Length = 220

 Score =  186 bits (472), Expect = 4e-47
 Identities = 97/153 (63%), Positives = 106/153 (69%), Gaps = 5/153 (3%)
 Frame = +2

Query: 110 ELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXXXX 289
           ELW+TLK+AI AYTGLSP            +Y V+SG FA                    
Sbjct: 4   ELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEE 63

Query: 290 X-----VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKD 454
                 VQ+GE+ EEEL+QYDGSDP+KPLLMAIK QIYDVTQSRMFYGPGGPYALFAGKD
Sbjct: 64  PPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKD 123

Query: 455 ASRALAKMSFEPQDLNGDTSGLGPFELDALQDW 553
           ASRALAKMSFE +DL  D SGLGPFELDALQDW
Sbjct: 124 ASRALAKMSFEEKDLTWDVSGLGPFELDALQDW 156



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>SBP2_ARATH (Q9M2Z4) Putative steroid binding protein 2 (AtMP2)|
          Length = 233

 Score =  183 bits (465), Expect = 2e-46
 Identities = 96/151 (63%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
 Frame = +2

Query: 104 VAELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXX 283
           V ++WETLK+ I AYTGLSP            +Y VVSG F                   
Sbjct: 2   VQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP 61

Query: 284 XXX-VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDAS 460
               VQLGE+ EEEL+ YDGSD KKPLLMAIKGQIYDV+QSRMFYGPGGPYALFAGKDAS
Sbjct: 62  LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDAS 121

Query: 461 RALAKMSFEPQDLNGDTSGLGPFELDALQDW 553
           RALAKMSFE QDL GD SGLG FEL+ALQDW
Sbjct: 122 RALAKMSFEDQDLTGDISGLGAFELEALQDW 152



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>SBP3_ARATH (Q9SK39) Putative steroid-binding protein 3 (AtMP3)|
          Length = 100

 Score = 92.8 bits (229), Expect = 6e-19
 Identities = 42/83 (50%), Positives = 58/83 (69%)
 Frame = +2

Query: 305 EVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 484
           E   E+L QY+G+D  KP+ +AIKG+++DVT  + FYG GG Y++FAGKDASRAL KMS 
Sbjct: 2   EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61

Query: 485 EPQDLNGDTSGLGPFELDALQDW 553
             +D++    GL   E++ L DW
Sbjct: 62  NEEDVSPSLEGLTEKEINTLNDW 84



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>NENF_MOUSE (Q9CQ45) Neudesin precursor (Neuron-derived neurotrophic factor)|
           (Secreted protein of unknown function) (SPUF protein)
          Length = 171

 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 41/79 (51%), Positives = 55/79 (69%)
 Frame = +2

Query: 314 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 493
           EEEL +Y G +  +P+ +A+KG ++DVT  + FYG G PY   AGKD+SR +AKMS +P 
Sbjct: 48  EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107

Query: 494 DLNGDTSGLGPFELDALQD 550
           DL  DT+GL   EL+AL D
Sbjct: 108 DLTHDTTGLTAKELEALDD 126



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>NENF_RAT (Q6IUR5) Neudesin precursor (Neuron-derived neurotrophic factor)|
           (Spinal cord injury-related protein 10) (SCIRP10-related
           protein)
          Length = 171

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 41/79 (51%), Positives = 54/79 (68%)
 Frame = +2

Query: 314 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 493
           EEEL +Y G +  +P+ +A+KG ++DVT  + FYG G PY   AGKD+SR +AKMS +P 
Sbjct: 48  EEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107

Query: 494 DLNGDTSGLGPFELDALQD 550
           DL  D SGL   EL+AL D
Sbjct: 108 DLTHDISGLTAKELEALDD 126



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>NENF_HUMAN (Q9UMX5) Neudesin precursor (Neuron-derived neurotrophic factor)|
           (Secreted protein of unknown function) (SPUF protein)
          Length = 172

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 38/79 (48%), Positives = 54/79 (68%)
 Frame = +2

Query: 314 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 493
           EEEL +Y G +  +P+ +A+KG ++DVT  + FYG G PY    GKD++R +AKMS +P 
Sbjct: 49  EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPA 108

Query: 494 DLNGDTSGLGPFELDALQD 550
           DL  DT+GL   EL+AL +
Sbjct: 109 DLTHDTTGLTAKELEALDE 127



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>PGRC1_RAT (P70580) Membrane-associated progesterone receptor component 1|
           (Acidic 25 kDa protein) (25-DX)
          Length = 194

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
 Frame = +2

Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496
           ELR+YDG  DP+  +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA    + + 
Sbjct: 76  ELRRYDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133

Query: 497 LN---GDTSGLGPFELDALQDW 553
           L     D S L P + + L DW
Sbjct: 134 LKDEYDDLSDLTPAQQETLNDW 155



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>PGRC1_PIG (Q95250) Membrane-associated progesterone receptor component 1|
          Length = 193

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
 Frame = +2

Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496
           ELR++DG  DP+  +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA    + + 
Sbjct: 75  ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 132

Query: 497 LN---GDTSGLGPFELDALQDW 553
           L     D S L P + + L DW
Sbjct: 133 LKDEYDDLSDLTPAQQETLNDW 154



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>PGRC1_MOUSE (O55022) Membrane-associated progesterone receptor component 1|
          Length = 194

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
 Frame = +2

Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496
           ELR++DG  DP+  +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA    + + 
Sbjct: 76  ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133

Query: 497 LN---GDTSGLGPFELDALQDW 553
           L     D S L P + + L DW
Sbjct: 134 LKDEYDDLSDLTPAQQETLSDW 155



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>PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor component 2|
           (Progesterone membrane-binding protein) (Steroid
           receptor protein DG6)
          Length = 223

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
 Frame = +2

Query: 317 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEP-- 490
           E+LRQYDGS   + +L+A+ G+++DVT+   FYGP GPY +FAG+DASR LA    +   
Sbjct: 106 EQLRQYDGSRNPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 164

Query: 491 -QDLNGDTSGLGPFELDALQDW 553
            +D   D S L   +++++++W
Sbjct: 165 LRDEYDDLSDLNAVQMESVREW 186



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>PGRC2_MOUSE (Q80UU9) Membrane associated progesterone receptor component 2|
           (Fragment)
          Length = 214

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
 Frame = +2

Query: 317 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEP-- 490
           E+LRQYDG+   + +L+A+ G+++DVT+   FYGP GPY +FAG+DASR LA    +   
Sbjct: 97  EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 155

Query: 491 -QDLNGDTSGLGPFELDALQDW 553
            +D   D S L   +++++++W
Sbjct: 156 LRDEYDDLSDLNAVQMESVREW 177



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>PGRC1_HUMAN (O00264) Membrane-associated progesterone receptor component 1|
           (mPR)
          Length = 194

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
 Frame = +2

Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496
           ELR++DG  DP+  +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA    + + 
Sbjct: 76  ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133

Query: 497 LN---GDTSGLGPFELDALQDW 553
           L     D S L   + + L DW
Sbjct: 134 LKDEYDDLSDLTAAQQETLSDW 155



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>PGRC2_RAT (Q5XIU9) Membrane associated progesterone receptor component 2|
          Length = 217

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
 Frame = +2

Query: 317 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEP-- 490
           E+LRQYDG+   + +L+A+ G+++DVT+   FYGP GPY +FAG+DASR LA    +   
Sbjct: 100 EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 158

Query: 491 -QDLNGDTSGLGPFELDALQDW 553
            +D   D S L   +++++++W
Sbjct: 159 LRDEYDDLSDLNAVQMESVREW 180



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>YL81_SCHPO (O13995) Hypothetical protein C25B8.01 in chromosome I|
          Length = 166

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
 Frame = +2

Query: 320 ELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDL 499
           EL++Y+GS     + +AIKG +Y+VT    FYGP GPY+ FAG DASR LAK SF+ + +
Sbjct: 47  ELKEYNGSK-NSLVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNSFDDEFI 105

Query: 500 N-------GDTSGLGPFELDALQDW 553
                    D S L   E  AL DW
Sbjct: 106 PDSDAEELDDCSDLNDEERQALNDW 130



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>DAP1_YEAST (Q12091) Damage response protein 1|
          Length = 152

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
 Frame = +2

Query: 293 VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALA 472
           V  G      L +++G D +K + +AI+G++YD T+ R FYGP GPY  FAG DASR LA
Sbjct: 39  VVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLA 97

Query: 473 KMSFEPQDLNGDTSGLGPF------ELDALQDW 553
             SF+   +      + P       ++DAL +W
Sbjct: 98  LNSFDLDVIKDWDQPIDPLDDLTKEQIDALDEW 130



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>GLPK_XANCP (Q8PDI0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 499

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 24/77 (31%), Positives = 35/77 (45%)
 Frame = +2

Query: 305 EVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 484
           E D E L   D      P + +   ++Y +TQ++ FYG   P A  AG   +    +  F
Sbjct: 198 EWDAELLEMLDVPAQMLPEVRS-SSEVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACF 256

Query: 485 EPQDLNGDTSGLGPFEL 535
           EP  +  +T G G F L
Sbjct: 257 EP-GMAKNTYGTGCFML 272



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>GLPK_XANAC (Q8PQG7) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 499

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +2

Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPFEL 535
           ++Y +TQ++ FYG   P A  AG   +    +  FEP  +  +T G G F L
Sbjct: 222 EVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACFEP-GMAKNTYGTGCFML 272



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>GLPK_ENTFA (O34154) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 500

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPF 529
           ++Y +T++  FYG   P A  AG   +    +M+FEP  +  +T G G F
Sbjct: 221 EVYGLTKNYHFYGSEVPIAGMAGDQQAALFGQMAFEP-GMVKNTYGTGSF 269



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>Y3770_BACSK (Q5WBF8) UPF0271 protein ABC3770|
          Length = 253

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/61 (31%), Positives = 27/61 (44%)
 Frame = +2

Query: 332 YDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDT 511
           Y+ +   + L  AI   +YDV  + +FYG  G   + AGK A    A   F  +    D 
Sbjct: 116 YNMAAADQALAEAIANAVYDVDPNLVFYGLAGSALIAAGKKAGLKTASEVFADRTYQADG 175

Query: 512 S 514
           S
Sbjct: 176 S 176



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>GLPK_LACLA (Q9CG64) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 498

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPF 529
           ++Y VT+   F+G   P +  AG   +    +M+FEP  +  +T G G F
Sbjct: 223 EVYGVTKGFHFFGSEVPISGMAGDQQAALFGQMAFEPGMIK-NTYGTGSF 271



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>DX26B_MOUSE (Q8BND4) Protein DDX26B|
          Length = 861

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
 Frame = -3

Query: 551 SLVVRRARTAQGPKYHRSGPGARKTSWLELCWRLCQR-IGHK----VHQVH 414
           SL++RRA+TA     H  G G    SW   C  L +   GH     +H  H
Sbjct: 628 SLLLRRAQTAPTVTNHVGGKGPLSASWFPSCPSLVKHTFGHPDTTVIHDTH 678


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,618,781
Number of Sequences: 219361
Number of extensions: 940001
Number of successful extensions: 2946
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2939
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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